View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16571_low_31 (Length: 277)
Name: NF16571_low_31
Description: NF16571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16571_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 33675372 - 33675638
Alignment:
| Q |
1 |
atccaaagttcttttgcttttctaagaccagtcaattcttacatacataataaatttgattctattcatttatcttgtaacatgaataaaaggaattagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33675372 |
atccaaagttcttttgcttttctaagaccagtcaattcttacatacataataaatttgattctattcatttatcttgtaacatgaataaaaggaattagt |
33675471 |
T |
|
| Q |
101 |
cctttgatctttctgggctgnnnnnnngttgttgcaacttgcaaagcttgccgttgtatataattccttacgcattctttgggttgagttgggctatttt |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33675472 |
cctttgatctttctgggctgtttttttgttgttgcaacttgcaaagcttgccgttgtatataattccttacgcattctttgggttgagttgggctatttt |
33675571 |
T |
|
| Q |
201 |
tcttcttgattaatcactttggaaatcaaaagctccctctgaagtcaactcttttatttgatctgtg |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33675572 |
tcttcttgattaatcactttggaaatcaaaagctccctctgaagtcaactcttttatttgatctgtg |
33675638 |
T |
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