View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16571_low_9 (Length: 453)
Name: NF16571_low_9
Description: NF16571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16571_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 13 - 445
Target Start/End: Original strand, 34095615 - 34096047
Alignment:
| Q |
13 |
cattccaaacatagctagtgagttagacacttagttagaaagtgttaagacatagaaggtgctagtattaattaattaatttgatagataatcatgctaa |
112 |
Q |
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| T |
34095615 |
cattccaaacatagctagtgagttagacacttagttagaaagtgttaagacatagaaggtgctagtattaattaattaatttgatagataatcatgctaa |
34095714 |
T |
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| Q |
113 |
taagaatttgtttgactattagcatttagcacaatagaactaccattgttggtatttaaatagtactgtactattgcaaagcactttttaggtctagctg |
212 |
Q |
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| T |
34095715 |
taagaatttgtttgactattagcatttagcacaatagaactaccattgttggtatctaaatagtactgtactattgcaaagcactttttaggtctagctg |
34095814 |
T |
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| Q |
213 |
agaagatgccatggagaataaaataaggtctatgcgtataatggaacaaacctaggatttgattagattccacttaaatacaatgaatatatttgattat |
312 |
Q |
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| T |
34095815 |
agaagatgccatggagaataaaataaggtctatgcgtataatggaacaaacctaggatttgattagattccacttaaatacaatgaatatatttgattat |
34095914 |
T |
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| Q |
313 |
attcttacttgatctctatattcttcttctaatttcgtcaacnnnnnnntattcttcttcttatgtcgaatataagcaatacaaagctatttccgctggt |
412 |
Q |
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| T |
34095915 |
attcttacttgatctctatattcttcttctaatttcgtcaacaaaaaaatattcttcttcttatgtcgaatataagcaatacaaagctatttccgctggt |
34096014 |
T |
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| Q |
413 |
tcaaaatataaataaatttatacaatattattg |
445 |
Q |
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| T |
34096015 |
tcaaaatataaataaatttatacaatattattg |
34096047 |
T |
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