View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16572_low_1 (Length: 792)

Name: NF16572_low_1
Description: NF16572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16572_low_1
NF16572_low_1
[»] chr4 (9 HSPs)
chr4 (416-693)||(1390178-1390455)
chr4 (171-348)||(1390680-1390860)
chr4 (464-647)||(1397688-1397871)
chr4 (12-82)||(1390865-1390935)
chr4 (344-408)||(1359539-1359603)
chr4 (344-407)||(1390489-1390552)
chr4 (93-182)||(45645951-45646040)
chr4 (533-648)||(45645234-45645349)
chr4 (362-397)||(45645613-45645648)
[»] chr5 (9 HSPs)
chr5 (93-318)||(34666319-34666547)
chr5 (93-183)||(34646763-34646853)
chr5 (98-182)||(19648706-19648790)
chr5 (362-397)||(34646414-34646449)
chr5 (362-397)||(34666108-34666143)
chr5 (217-295)||(19648822-19648900)
chr5 (360-397)||(19649094-19649131)
chr5 (239-318)||(34646625-34646707)
chr5 (542-648)||(19649401-19649507)
[»] chr8 (10 HSPs)
chr8 (93-183)||(14192654-14192744)
chr8 (79-295)||(14201545-14201755)
chr8 (57-167)||(14183738-14183851)
chr8 (428-627)||(14200962-14201161)
chr8 (93-167)||(40718477-40718551)
chr8 (362-404)||(40718111-40718153)
chr8 (360-404)||(14183354-14183398)
chr8 (429-611)||(14183022-14183204)
chr8 (216-289)||(14183601-14183674)
chr8 (715-772)||(14191800-14191857)
[»] chr6 (3 HSPs)
chr6 (96-166)||(34303447-34303517)
chr6 (94-176)||(33888832-33888914)
chr6 (569-615)||(33893429-33893475)


Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 416 - 693
Target Start/End: Complemental strand, 1390455 - 1390178
Alignment:
Q  416 atagcagcttctccaattgatgaacccaattgatttataagagacatgggtccatttccaaggccaaccagaccagagctcttgccttcaaatgacaatg 515  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390455 atagcagcttcaccaattgatgaacccaattgatttataagagacacgggtccatttccaaggccaaccagaccagagctcttgccttcaaatgacaatg 1390356  T
Q  516 tattattatgtctaaaacctatcactgttttaggaaatgaaatagaaaaaccagaggtgaaatctaatgtaagagtttccaaactaagatctccttgtga 615  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1390355 tattattatgtccaaaacctatcactgttttaggaaatgaaatagaagaaccagaggtgaaatctaatgtaagagttttcaaactaagatctccttgtga 1390256  T
Q  616 tattgatccatcaccatacttaatagtatattcgcgagnnnnnnnnattacaagaggtagattcaaaagacttacatt 693  Q
    ||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||| ||| ||||||||    
T  1390255 tattgatccatcaccatacttaatagtatattcgcaagttttttttattacaagaggtagattcacaaggcttacatt 1390178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 171 - 348
Target Start/End: Complemental strand, 1390860 - 1390680
Alignment:
Q  171 attcccaaagatgactttattgattcgagatgggacaagagccaaacaaacaaccccatcggcaacttgaacaaaggtgctaatagaatgcaacttaata 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1390860 attcccaaagatgcctttattgattcgagatgggacaagagccaaacaaacaaccccatcggcaacttgaacaaaggtgctaatagattgcaacttaata 1390761  T
Q  271 tctgcaccttgaaaatgtgcagtg---aaaggaaaatcattttcatttgatgcaaatgaataacaaaggtttaaaatacca 348  Q
    |||||||||| |||||||||||||   | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1390760 tctgcaccttcaaaatgtgcagtgattataggaaaatcatattcatttgatgcaaatgaataacaaaggtttaaaatacca 1390680  T

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Target: chr4; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 464 - 647
Target Start/End: Complemental strand, 1397871 - 1397688
Alignment:
Q  464 ggtccatttccaaggccaaccagaccagagctcttgccttcaaatgacaatgtattattatgtctaaaacctatcactgttttaggaaatgaaatagaaa 563  Q
    ||||||||| ||||| |||||| ||||||||||| |||||||||| ||| | ||||  |||||| | |||||||||| |||||||| ||||||||||||     
T  1397871 ggtccatttgcaaggtcaaccacaccagagctctagccttcaaataacactatatttatatgtccacaacctatcacagttttaggcaatgaaatagaag 1397772  T
Q  564 aaccagaggtgaaatctaatgtaagagtttccaaactaagatctccttgtgatattgatccatcaccatacttaatagtatatt 647  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  1397771 aaccagaggtggaatctaatgtaagagtttctaaactaagatctccttgtgattttgatccatcaccatagtcaatagtatatt 1397688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 1390935 - 1390865
Alignment:
Q  12 gagatgaagtaaaaaatgaattactattattattattataaattcaaggagtaaagtaaacaaagtctaca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1390935 gagatgaagtaaaaaatgaattactattattattattataaattcaaggagtaaagtaaacaaagtctaca 1390865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 1359603 - 1359539
Alignment:
Q  344 taccatttgattgcttttcaaattctactcttttgtttccaacactaaatgctttcaatgttatt 408  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  1359603 taccatttgattgcttttcaaattccactattttgtttccaacactaaatgctttcaatgttatt 1359539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 1390552 - 1390489
Alignment:
Q  344 taccatttgattgcttttcaaattctactcttttgtttccaacactaaatgctttcaatgttat 407  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  1390552 taccatttgattgctttgaaaattctactcttttgtttccaacactaaatgctttcaatgttat 1390489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 45646040 - 45645951
Alignment:
Q  93 tttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattcccaaagat 182  Q
    ||||||||||||| |||| ||||| |||||  ||  ||||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  45646040 tttggtacaatcagtaggtttaaaggacactgttccttgttgaagatcacaaccaaccaacaaattttgttgagccaagttaccaaagat 45645951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 533 - 648
Target Start/End: Complemental strand, 45645349 - 45645234
Alignment:
Q  533 cctatcactgttttaggaaatgaaatagaaaaaccagaggtgaaatctaatgtaagagtttccaaactaagatctccttgtgatattgatccatcaccat 632  Q
    |||||||| |||||||||||||||| ||     |||| |||| |||| |||||||||||||| | ||||||||||||||||||   |||  |||| ||||    
T  45645349 cctatcacagttttaggaaatgaaacagggcttccagtggtggaatccaatgtaagagtttcaacactaagatctccttgtgaatgtgaatcatctccat 45645250  T
Q  633 acttaatagtatattc 648  Q
    | ||||| ||||||||    
T  45645249 agttaattgtatattc 45645234  T

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Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 362 - 397
Target Start/End: Complemental strand, 45645648 - 45645613
Alignment:
Q  362 caaattctactcttttgtttccaacactaaatgctt 397  Q
    ||||||||||||||||||||||||||||||||||||    
T  45645648 caaattctactcttttgtttccaacactaaatgctt 45645613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 93 - 318
Target Start/End: Complemental strand, 34666547 - 34666319
Alignment:
Q  93 tttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattcccaaagatg--actttat 190  Q
    ||||||||||||| |||| ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||    |    
T  34666547 tttggtacaatcagtaggtttaaacgacactgttttttgttgaagatcgtaaccaaccaacaaattttgttgagccaagttcccaaagatggaaccaagt 34666448  T
Q  191 tgattcgagatgggacaagagccaaacaaacaaccccatcggcaacttgaacaaaggtgctaatagaatgcaacttaatatctgcaccttgaaaatgtgc 290  Q
    |||   |||||||    | ||| || |||||||  ||||| | || | |||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  34666447 tga--ggagatggttggaaagcaaagcaaacaataccatcagtaattggaacaaaggtactaatagaatgcaactcaatatcggcacctttaaaatgtgc 34666350  T
Q  291 agtg---aaaggaaaatcattttcatttgat 318  Q
     |||   | ||||||||||| ||||||||||    
T  34666349 ggtgattataggaaaatcatattcatttgat 34666319  T

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Target: chr5; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 34646853 - 34646763
Alignment:
Q  93 tttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattcccaaagatg 183  Q
    ||||||||||||| |||| ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  34646853 tttggtacaatcagtaggtttaaacgacactgttttttgttgaagatcgtaaccaaccaacaaattttgttgagccaagttcccaaagatg 34646763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 19648706 - 19648790
Alignment:
Q  98 tacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattcccaaagat 182  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||    
T  19648706 tacaatcactaggcttaaacgacacaatattttgttgaagatcataaccaaccaacaaatttagttgtgccaagtttccaaagat 19648790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 362 - 397
Target Start/End: Complemental strand, 34646449 - 34646414
Alignment:
Q  362 caaattctactcttttgtttccaacactaaatgctt 397  Q
    ||||||||||||||||||||||||||||||||||||    
T  34646449 caaattctactcttttgtttccaacactaaatgctt 34646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 362 - 397
Target Start/End: Complemental strand, 34666143 - 34666108
Alignment:
Q  362 caaattctactcttttgtttccaacactaaatgctt 397  Q
    ||||||||||||||||||||||||||||||||||||    
T  34666143 caaattctactcttttgtttccaacactaaatgctt 34666108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 19648822 - 19648900
Alignment:
Q  217 caaacaaccccatcggcaacttgaacaaaggtgctaatagaatgcaacttaatatctgcaccttgaaaatgtgcagtga 295  Q
    ||||| || ||||| ||||| ||| ||||||| ||||| |  | |||||||||||||||||||| ||||||||||||||    
T  19648822 caaaccacaccatcagcaacatgagcaaaggtactaattgggttcaacttaatatctgcacctttaaaatgtgcagtga 19648900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 19649094 - 19649131
Alignment:
Q  360 ttcaaattctactcttttgtttccaacactaaatgctt 397  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19649094 ttcaaattctattcttttgtttccaacactaaatgctt 19649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 34646707 - 34646625
Alignment:
Q  239 gaacaaaggtgctaatagaatgcaacttaatatctgcaccttgaaaatgtgcagtg---aaaggaaaatcattttcatttgat 318  Q
    |||||||||| |||||||||||||||| || ||| ||||||| ||||||| | |||   | ||||||||||| ||||||||||    
T  34646707 gaacaaaggtactaatagaatgcaactcaacatcggcacctttaaaatgtacggtgattataggaaaatcatattcatttgat 34646625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 648
Target Start/End: Original strand, 19649401 - 19649507
Alignment:
Q  542 gttttaggaaatgaaatagaaaaaccagaggtgaaatctaatgtaagagtttccaaactaagatctccttgtgatattgatccatcaccatacttaatag 641  Q
    |||||||||||||||| ||||  ||| | |||| |||| ||||||||||| || | |||||| |||||||||||   ||||  ||||| | | |||||||    
T  19649401 gttttaggaaatgaaacagaatgaccggtggtggaatccaatgtaagagtctcaacactaagttctccttgtgaatatgattgatcactaaagttaatag 19649500  T
Q  642 tatattc 648  Q
    |||||||    
T  19649501 tatattc 19649507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 6e-27; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 14192744 - 14192654
Alignment:
Q  93 tttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattcccaaagatg 183  Q
    ||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  14192744 tttggtacaatcactaggtttaaaggacacaattttttgctgaagatcataaccaaccatcaaattttgctgagccaaatttccaaagatg 14192654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 79 - 295
Target Start/End: Complemental strand, 14201755 - 14201545
Alignment:
Q  79 tacactcaatatggtttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattcccaa 178  Q
    |||| ||||||||| ||||||||||||| ||||||||| |  ||| | |||||   ||||| |||||||||||||||||| ||||||||||  || ||||    
T  14201755 tacattcaatatggcttggtacaatcaacaggcttaaatgtaacagtattttgaacaagattataaccaaccaacaaattctgttgagccacgtttccaa 14201656  T
Q  179 agatgactttattgattcgagatgggacaagagccaaacaaacaaccccatcggcaacttgaacaaaggtgctaatagaatgcaacttaatatctgcacc 278  Q
    ||||| ||       || ||||||||| || |||||| ||  ||| |||||| | ||||| || |||||| |||||| ||| ||| ||||||||||||||    
T  14201655 agatggct------gtttgagatgggataaaagccaagcatgcaatcccatcagaaactttaataaaggtactaatataatacaatttaatatctgcacc 14201562  T
Q  279 ttgaaaatgtgcagtga 295  Q
    || ||||||||||||||    
T  14201561 tttaaaatgtgcagtga 14201545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 14183851 - 14183738
Alignment:
Q  57 aaggagtaaagtaaacaaagtctaca---ctcaatatggtttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaac 153  Q
    |||||| |||||||||||||||||||   | || ||   |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  14183851 aaggaggaaagtaaacaaagtctacaacacccattacactttgctacaatcagtaggcttaaacgacacaattttttgttgaagatcataaccaaccaac 14183752  T
Q  154 aaattttgttgagc 167  Q
    ||||| || |||||    
T  14183751 aaattctgctgagc 14183738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 428 - 627
Target Start/End: Complemental strand, 14201161 - 14200962
Alignment:
Q  428 ccaattgatgaacccaattgatttataagagacatgggtccatttccaaggccaaccagaccagagctcttgccttcaaatgacaatgtattattatgtc 527  Q
    |||||||||| ||||||||||  |  ||||||||| |||||| ||||||||||||| | |||||||||   ||| | ||| | |  ||||||  ||| ||    
T  14201161 ccaattgatgtacccaattgagatggaagagacataggtccacttccaaggccaactataccagagcttgggccatgaaacgtccctgtatttctatatc 14201062  T
Q  528 taaaacctatcactgttttaggaaatgaaatagaaaaaccagaggtgaaatctaatgtaagagtttccaaactaagatctccttgtgatattgatccatc 627  Q
     | | ||||||| |||||||||||||||||  ||  | || | |||| |||||||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  14201061 cacatcctatcattgttttaggaaatgaaactgagtagccggtggtggaatctaatgtaagagtctccacactaagatatccttgtgaaattgatccatc 14200962  T

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Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 40718551 - 40718477
Alignment:
Q  93 tttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagc 167  Q
    |||| |||||||| |||||||||| |||||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  40718551 tttgctacaatcagtaggcttaaatgacacagttttttgtttaaggtcataaccaaccaacaaattctgttgagc 40718477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 404
Target Start/End: Complemental strand, 40718153 - 40718111
Alignment:
Q  362 caaattctactcttttgtttccaacactaaatgctttcaatgt 404  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  40718153 caaattctattcttttgtttccaacactaaatgcttccaatgt 40718111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 14183398 - 14183354
Alignment:
Q  360 ttcaaattctactcttttgtttccaacactaaatgctttcaatgt 404  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  14183398 ttcaaattctattcttttgttaccaacactaaatgcttccaatgt 14183354  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 429 - 611
Target Start/End: Complemental strand, 14183204 - 14183022
Alignment:
Q  429 caattgatgaacccaattgatttataagagacatgggtccatttccaaggccaaccagaccagagctcttgccttcaaatgacaatgtattattatgtct 528  Q
    |||||||||| ||||||||  | ||||||||    ||||||  |||||||||||| | |||||| ||    ||||||||||||| |||||| | |  ||     
T  14183204 caattgatgatcccaattgtgtaataagagatgctggtccacctccaaggccaactataccagaacttgcaccttcaaatgacactgtattgtcagttcc 14183105  T
Q  529 aaaacctatcactgttttaggaaatgaaatagaaaaaccagaggtgaaatctaatgtaagagtttccaaactaagatctcctt 611  Q
    | | |||||||| ||||||||||||||||||| |   |||| || | | |||||||||||||| || | |||||||| |||||    
T  14183104 acatcctatcacagttttaggaaatgaaataggatgtccagtggaggactctaatgtaagagtatcaacactaagatttcctt 14183022  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 14183674 - 14183601
Alignment:
Q  216 acaaacaaccccatcggcaacttgaacaaaggtgctaatagaatgcaacttaatatctgcaccttgaaaatgtg 289  Q
    ||||||||  ||||| ||||| | |||||| || ||||||| ||||||||||| ||| ||||||| ||||||||    
T  14183674 acaaacaatgccatctgcaacatcaacaaatgtactaataggatgcaacttaacatccgcacctttaaaatgtg 14183601  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 772
Target Start/End: Complemental strand, 14191857 - 14191800
Alignment:
Q  715 tgttattgtaacttgatggtttcaaaggattaaagataggagtcgtttggttgtaaca 772  Q
    |||| ||||||||||| | |||| | |||||||| |||||||| ||||||||||||||    
T  14191857 tgtttttgtaacttgacgatttcgacggattaaacataggagtggtttggttgtaaca 14191800  T

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Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 34303517 - 34303447
Alignment:
Q  96 ggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgag 166  Q
    ||||||||| | || ||||||||||||| ||||||||||||| |||||||||||||  |||| ||||||||    
T  34303517 ggtacaatctacagacttaaaagacacagttttttgttgaaggtcataaccaaccatgaaatcttgttgag 34303447  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 33888832 - 33888914
Alignment:
Q  94 ttggtacaatcaataggcttaaaagacacaattttttgttgaagatcataaccaaccaacaaattttgttgagccaaattccc 176  Q
    ||||| |||||||||||||||||||| | ||| |||| ||| || ||||||||||| ||||| || ||||| ||||| |||||    
T  33888832 ttggtgcaatcaataggcttaaaagagataatatttttttgtaggtcataaccaactaacaagttatgttgtgccaagttccc 33888914  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 569 - 615
Target Start/End: Complemental strand, 33893475 - 33893429
Alignment:
Q  569 gaggtgaaatctaatgtaagagtttccaaactaagatctccttgtga 615  Q
    |||||| |||||||||| ||||| |||| ||||||||||||||||||    
T  33893475 gaggtggaatctaatgttagagtctccatactaagatctccttgtga 33893429  T

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