View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16572_low_34 (Length: 231)

Name: NF16572_low_34
Description: NF16572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16572_low_34
NF16572_low_34
[»] chr6 (33 HSPs)
chr6 (84-219)||(7915917-7916052)
chr6 (18-99)||(27653219-27653300)
chr6 (18-102)||(9705022-9705106)
chr6 (18-101)||(4868576-4868659)
chr6 (19-102)||(4868811-4868894)
chr6 (17-101)||(9705255-9705339)
chr6 (18-103)||(6400617-6400702)
chr6 (18-99)||(8026391-8026472)
chr6 (17-102)||(11721906-11721991)
chr6 (18-78)||(2753260-2753320)
chr6 (46-98)||(5572386-5572438)
chr6 (18-102)||(13353203-13353287)
chr6 (18-102)||(33796328-33796412)
chr6 (18-105)||(13740683-13740770)
chr6 (18-105)||(13746183-13746270)
chr6 (18-101)||(16570161-16570244)
chr6 (46-101)||(19712982-19713037)
chr6 (41-99)||(8026629-8026687)
chr6 (18-100)||(30256580-30256662)
chr6 (41-99)||(30256837-30256895)
chr6 (24-102)||(33494547-33494625)
chr6 (18-99)||(12330180-12330261)
chr6 (52-101)||(13740952-13741001)
chr6 (52-101)||(13746452-13746501)
chr6 (46-99)||(15082145-15082198)
chr6 (18-99)||(21690724-21690805)
chr6 (18-99)||(27656460-27656541)
chr6 (18-102)||(3680014-3680098)
chr6 (41-101)||(4161845-4161905)
chr6 (41-101)||(4223465-4223525)
chr6 (18-102)||(6054171-6054255)
chr6 (18-102)||(6542941-6543025)
chr6 (41-101)||(25065093-25065153)
[»] scaffold0181 (1 HSPs)
scaffold0181 (18-101)||(20941-21024)
[»] chr4 (34 HSPs)
chr4 (18-101)||(22845446-22845529)
chr4 (18-101)||(22863476-22863559)
chr4 (18-102)||(50543328-50543412)
chr4 (18-99)||(53814675-53814756)
chr4 (18-99)||(53814930-53815011)
chr4 (18-102)||(6218206-6218290)
chr4 (17-101)||(6218440-6218524)
chr4 (18-102)||(35788661-35788745)
chr4 (18-102)||(36685873-36685957)
chr4 (18-102)||(52559569-52559653)
chr4 (18-101)||(35788896-35788979)
chr4 (18-101)||(41187931-41188014)
chr4 (23-101)||(35609489-35609567)
chr4 (24-102)||(40717439-40717517)
chr4 (18-99)||(14783188-14783269)
chr4 (46-99)||(20822003-20822056)
chr4 (18-99)||(21498797-21498878)
chr4 (41-102)||(22231306-22231367)
chr4 (18-99)||(25052854-25052935)
chr4 (18-99)||(28245527-28245608)
chr4 (41-102)||(40726746-40726807)
chr4 (18-102)||(34358028-34358112)
chr4 (18-102)||(50543565-50543649)
chr4 (18-101)||(22827540-22827623)
chr4 (18-101)||(39902562-39902645)
chr4 (41-99)||(9685423-9685481)
chr4 (17-99)||(9685633-9685715)
chr4 (18-99)||(400566-400647)
chr4 (17-102)||(5398474-5398558)
chr4 (41-102)||(12869261-12869322)
chr4 (18-99)||(21498356-21498437)
chr4 (18-102)||(1518166-1518250)
chr4 (18-106)||(35175037-35175124)
chr4 (18-78)||(44118881-44118941)
[»] chr7 (25 HSPs)
chr7 (18-102)||(21861296-21861380)
chr7 (18-102)||(25620138-25620222)
chr7 (20-102)||(33996309-33996391)
chr7 (18-102)||(36277224-36277308)
chr7 (18-101)||(43075309-43075392)
chr7 (18-101)||(43085536-43085619)
chr7 (18-101)||(48243060-48243143)
chr7 (17-99)||(36206064-36206146)
chr7 (18-95)||(2544452-2544529)
chr7 (17-102)||(3038082-3038167)
chr7 (18-99)||(29469607-29469688)
chr7 (18-99)||(34027395-34027476)
chr7 (18-102)||(2404406-2404490)
chr7 (18-102)||(21054951-21055035)
chr7 (18-102)||(26239914-26239998)
chr7 (41-101)||(31892412-31892472)
chr7 (46-102)||(40121922-40121978)
chr7 (18-102)||(47710445-47710529)
chr7 (18-102)||(47722101-47722185)
chr7 (18-95)||(2401362-2401439)
chr7 (41-102)||(21821831-21821892)
chr7 (18-99)||(26562074-26562155)
chr7 (18-99)||(29469842-29469923)
chr7 (53-101)||(1000586-1000634)
chr7 (18-102)||(42985121-42985205)
[»] chr5 (37 HSPs)
chr5 (18-102)||(41666991-41667075)
chr5 (18-101)||(28510093-28510176)
chr5 (18-101)||(41666756-41666839)
chr5 (18-99)||(27132994-27133075)
chr5 (18-102)||(2063732-2063815)
chr5 (18-102)||(24346499-24346583)
chr5 (18-102)||(24528542-24528626)
chr5 (18-102)||(24531601-24531685)
chr5 (18-101)||(18333464-18333547)
chr5 (18-100)||(9368597-9368679)
chr5 (23-101)||(12034697-12034775)
chr5 (46-104)||(21209704-21209762)
chr5 (41-103)||(25258091-25258153)
chr5 (41-103)||(25321881-25321943)
chr5 (22-99)||(20225047-20225124)
chr5 (41-102)||(25258299-25258360)
chr5 (41-102)||(25322089-25322150)
chr5 (18-102)||(15480324-15480408)
chr5 (38-102)||(18333697-18333761)
chr5 (19-103)||(21306890-21306974)
chr5 (19-103)||(21314728-21314812)
chr5 (18-102)||(24269869-24269952)
chr5 (18-102)||(38731836-38731920)
chr5 (24-99)||(24487646-24487721)
chr5 (41-99)||(8098342-8098400)
chr5 (18-99)||(7607596-7607677)
chr5 (41-102)||(15480584-15480645)
chr5 (46-99)||(21209922-21209975)
chr5 (18-102)||(1564565-1564649)
chr5 (46-102)||(13296922-13296978)
chr5 (18-102)||(13701066-13701150)
chr5 (18-102)||(24346735-24346819)
chr5 (18-98)||(24647698-24647778)
chr5 (52-100)||(26137345-26137393)
chr5 (26-78)||(29909509-29909561)
chr5 (18-70)||(37656967-37657019)
chr5 (18-102)||(43117884-43117968)
[»] chr3 (24 HSPs)
chr3 (18-102)||(16239593-16239677)
chr3 (18-102)||(16926947-16927031)
chr3 (18-102)||(54567894-54567978)
chr3 (19-102)||(31317232-31317314)
chr3 (18-101)||(35038193-35038276)
chr3 (18-99)||(39683268-39683350)
chr3 (18-102)||(1723074-1723158)
chr3 (18-102)||(30179706-30179790)
chr3 (18-99)||(11589787-11589868)
chr3 (41-102)||(24866222-24866283)
chr3 (18-102)||(20303062-20303146)
chr3 (23-102)||(4155331-4155410)
chr3 (41-103)||(8018993-8019055)
chr3 (20-102)||(54368520-54368602)
chr3 (18-95)||(6487338-6487415)
chr3 (18-95)||(20327619-20327696)
chr3 (18-99)||(20327850-20327931)
chr3 (47-104)||(21809143-21809200)
chr3 (18-103)||(39620328-39620413)
chr3 (46-98)||(13574686-13574738)
chr3 (41-101)||(34610586-34610646)
chr3 (18-102)||(35038426-35038510)
chr3 (18-78)||(39269333-39269393)
chr3 (18-101)||(50083079-50083163)
[»] chr2 (35 HSPs)
chr2 (18-102)||(2029771-2029855)
chr2 (18-102)||(2030006-2030090)
chr2 (18-101)||(16419504-16419587)
chr2 (18-99)||(17854693-17854774)
chr2 (22-102)||(15124781-15124861)
chr2 (18-102)||(37840339-37840423)
chr2 (22-102)||(40379442-40379522)
chr2 (18-101)||(5711438-5711521)
chr2 (22-101)||(40379208-40379287)
chr2 (18-100)||(29718330-29718412)
chr2 (20-102)||(33606287-33606369)
chr2 (18-99)||(10523021-10523102)
chr2 (41-102)||(10570995-10571056)
chr2 (17-102)||(28407791-28407876)
chr2 (18-102)||(17719402-17719486)
chr2 (21-101)||(19570973-19571053)
chr2 (46-102)||(27897604-27897660)
chr2 (21-101)||(30063266-30063346)
chr2 (18-77)||(17525361-17525420)
chr2 (41-100)||(21591807-21591866)
chr2 (18-96)||(2324476-2324554)
chr2 (17-95)||(5594029-5594106)
chr2 (18-104)||(9927913-9927999)
chr2 (41-99)||(19191611-19191669)
chr2 (47-101)||(31700744-31700798)
chr2 (38-95)||(1926446-1926503)
chr2 (18-95)||(2324242-2324319)
chr2 (18-99)||(5509081-5509162)
chr2 (18-99)||(17854930-17855011)
chr2 (18-102)||(5711673-5711757)
chr2 (18-102)||(14466408-14466492)
chr2 (18-102)||(14927104-14927188)
chr2 (46-102)||(16419297-16419353)
chr2 (46-78)||(24396130-24396162)
chr2 (21-101)||(30006578-30006658)
[»] chr1 (25 HSPs)
chr1 (18-102)||(4113004-4113088)
chr1 (18-101)||(40079154-40079237)
chr1 (18-99)||(3169768-3169849)
chr1 (18-102)||(17452826-17452910)
chr1 (18-101)||(4112539-4112622)
chr1 (18-99)||(17452680-17452761)
chr1 (18-99)||(51588994-51589075)
chr1 (18-99)||(51589228-51589309)
chr1 (18-99)||(51589808-51589889)
chr1 (18-102)||(25145483-25145567)
chr1 (46-102)||(25255341-25255397)
chr1 (18-102)||(35772266-35772350)
chr1 (18-78)||(38668362-38668422)
chr1 (20-78)||(5109255-5109312)
chr1 (52-102)||(38733187-38733237)
chr1 (19-101)||(41035826-41035908)
chr1 (41-99)||(51590063-51590121)
chr1 (17-102)||(7307722-7307807)
chr1 (41-102)||(31432228-31432289)
chr1 (55-104)||(33157260-33157309)
chr1 (41-102)||(35772054-35772115)
chr1 (20-100)||(4098403-4098482)
chr1 (18-102)||(26176910-26176994)
chr1 (21-101)||(41066944-41067024)
chr1 (18-102)||(49142510-49142594)
[»] chr8 (37 HSPs)
chr8 (18-102)||(24532419-24532503)
chr8 (18-102)||(36917437-36917521)
chr8 (18-102)||(39052927-39053011)
chr8 (18-101)||(35682780-35682863)
chr8 (21-102)||(10614937-10615018)
chr8 (18-99)||(17469820-17469901)
chr8 (18-99)||(17477067-17477148)
chr8 (18-99)||(19256587-19256668)
chr8 (18-102)||(11232192-11232276)
chr8 (18-102)||(11232427-11232511)
chr8 (18-102)||(12317048-12317132)
chr8 (41-101)||(12547123-12547183)
chr8 (18-102)||(18004094-18004178)
chr8 (41-101)||(22638178-22638238)
chr8 (52-104)||(37001500-37001552)
chr8 (41-101)||(39960217-39960277)
chr8 (41-101)||(42846604-42846664)
chr8 (18-101)||(10450002-10450085)
chr8 (24-99)||(24075307-24075382)
chr8 (18-100)||(8929019-8929101)
chr8 (46-100)||(15686040-15686094)
chr8 (41-102)||(10884090-10884150)
chr8 (18-99)||(19256821-19256902)
chr8 (18-99)||(34653153-34653233)
chr8 (18-99)||(34842680-34842761)
chr8 (21-102)||(42049685-42049766)
chr8 (18-98)||(4828295-4828375)
chr8 (18-106)||(5931943-5932031)
chr8 (18-102)||(20301263-20301347)
chr8 (18-102)||(21087895-21087979)
chr8 (41-101)||(27204989-27205049)
chr8 (41-101)||(27205087-27205147)
chr8 (41-101)||(27205185-27205245)
chr8 (18-102)||(31197617-31197700)
chr8 (18-78)||(38447449-38447509)
chr8 (21-101)||(40014663-40014743)
chr8 (18-102)||(41790661-41790744)
[»] scaffold0048 (1 HSPs)
scaffold0048 (53-102)||(81879-81928)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-99)||(56461-56542)
[»] scaffold0692 (1 HSPs)
scaffold0692 (18-102)||(5752-5836)
[»] scaffold0519 (2 HSPs)
scaffold0519 (18-102)||(1918-2002)
scaffold0519 (18-101)||(2153-2236)
[»] scaffold0129 (1 HSPs)
scaffold0129 (18-102)||(14305-14389)
[»] scaffold0092 (1 HSPs)
scaffold0092 (18-102)||(5657-5741)
[»] scaffold0083 (1 HSPs)
scaffold0083 (18-102)||(51238-51322)
[»] scaffold0766 (1 HSPs)
scaffold0766 (18-97)||(6276-6355)
[»] scaffold0334 (1 HSPs)
scaffold0334 (18-98)||(4431-4511)


Alignment Details
Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 7915917 - 7916052
Alignment:
Q  84 caaccacgatttctaagattattagctagagttgtttgttttatccgcttttaacatgtgatgttgggacacatgcctcttgagttagattatccaccgt 183  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7915917 caaccacgatttctaagattattaagaagagttgtttgttttatccgcttttaacatgtgatgttgggacacatgcctcttgagttagattatccaccgt 7916016  T
Q  184 tgataatattacatctaaaggctgagattcttctct 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  7916017 tgataatattacatctaaaggctgagattcttctct 7916052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 27653219 - 27653300
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||||||||||||||||||||||||  || ||||||||||||||||    
T  27653219 acaatttgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaa 27653300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 9705022 - 9705106
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| ||||||||||||||||||| |||||||  || ||||||| |||||||||||    
T  9705022 acaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagat 9705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 4868659 - 4868576
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  4868659 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 4868894 - 4868811
Alignment:
Q  19 caatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  4868894 caatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4868811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 9705255 - 9705339
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||   | ||||||||||||||||||    
T  9705255 aacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 6400702 - 6400617
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    ||||||||||||||| || ||| |||| ||||  ||||||||||||||||||| |||||||   | |||||||| ||| |||||||    
T  6400702 acaatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacggtttttaagatt 6400617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 8026391 - 8026472
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  8026391 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11721906 - 11721991
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||| ||||||||| ||  || |||| ||||| || ||| |||||||||||| |||||||  || |||||||||||||||||||    
T  11721906 aacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 11721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 2753260 - 2753320
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| |||||||||||| |||||||    
T  2753260 acaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgtt 2753320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 5572438 - 5572386
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttcta 98  Q
    ||||| ||||||||||||||||||| |||||||  || |||||||||||||||    
T  5572438 tcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttcta 5572386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 13353203 - 13353287
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  13353203 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 13353287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 33796328 - 33796412
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  33796328 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 33796412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 13740683 - 13740770
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagattat 105  Q
    ||||||||||||||| || ||  |||| || || || |||||||||||||| | |||||||  || |||||||||||||||| |||||    
T  13740683 acaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatattat 13740770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 13746183 - 13746270
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagattat 105  Q
    ||||||||||||||| || ||  |||| || || || |||||||||||||| | |||||||  || |||||||||||||||| |||||    
T  13746183 acaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatattat 13746270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 16570161 - 16570244
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||||||  |  ||||||| ||||   |||||||||||||||||| |||||||  || |||||| |||||||||||    
T  16570161 acaatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaaccatgatttctaaga 16570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 19712982 - 19713037
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||| |||||| ||||||||||||||||||||  || ||||||| ||||||||||    
T  19712982 tcacctcacaagccggttttgtgggattgtgttaggcccaaccaccatttctaaga 19713037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 8026629 - 8026687
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  8026629 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 30256580 - 30256662
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||||||||||||| ||  || |||| ||| | |||||  |||||||||||| |||||||  || |||||||||||||||||    
T  30256580 acaatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaag 30256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 30256837 - 30256895
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  30256837 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 30256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 33494547 - 33494625
Alignment:
Q  24 tgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  33494547 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 33494625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 12330261 - 12330180
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||| ||  || || | ||||| |||||| |||||||||| | |||||||  || ||||||||||||||||    
T  12330261 acaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaa 12330180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 13740952 - 13741001
Alignment:
Q  52 cacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||||||| |||||||  || ||||||| ||||||||||    
T  13740952 cacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13741001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 13746452 - 13746501
Alignment:
Q  52 cacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||||||| |||||||  || ||||||| ||||||||||    
T  13746452 cacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 15082198 - 15082145
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| |||||| ||||||||||||||||||||  || ||| ||||||||||||    
T  15082198 tcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaa 15082145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 21690724 - 21690805
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| || ||||||||| |||||||  || ||||||||||||||||    
T  21690724 acaatttgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaa 21690805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 27656460 - 27656541
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||| ||||||||    
T  27656460 acaatttgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 27656541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 3680014 - 3680098
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||  | ||||||||| ||||||||| |||||||  || ||||||| |||||||||||    
T  3680014 acaatgtgtttataactgggggcaatcctcctctcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaagat 3680098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 4161905 - 4161845
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||| |||||  | |||||||||| |||||||  || ||||||||||||||||||    
T  4161905 aatcttcaccacacaatccagttttgtggggttgtgttaggcccaaccacgatttctaaga 4161845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 4223525 - 4223465
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||| |||||  | |||||||||| |||||||  || ||||||||||||||||||    
T  4223525 aatcttcaccacacaatccagttttgtggggttgtgttaggcccaaccacgatttctaaga 4223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 6054171 - 6054255
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||| ||| |  |||| ||||| || ||||| |||||||||||| |||||   | |||||||||||||||||||    
T  6054171 acaatctgtttataagtgaggacaatcatcacctcataagtcagttttgtgggatcgtgttagactcaaccacgatttctaagat 6054255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 6543025 - 6542941
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| || ||| |||||||||||| |||||||   | ||||||||||||| |||||    
T  6543025 acaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagat 6542941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 25065153 - 25065093
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| |||||| |||||||||||| |||||||  || |||| |||||||||||||    
T  25065153 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 25065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 20941 - 21024
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||| ||||||| ||||||||||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  20941 acaatgtatttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 22845529 - 22845446
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  22845529 acaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 22863476 - 22863559
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| |||||||||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  22863476 acaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 50543412 - 50543328
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||| ||||| ||  || |||| |||||||||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  50543412 acaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 50543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 53814756 - 53814675
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  | ||||| ||||| |||||| ||||||||||||||||||||  || ||||||||||||||||    
T  53814756 acaatttgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 53815011 - 53814930
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| ||||||||||||||||||| |||||||  || ||||||||||||||||    
T  53815011 acaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaa 53814930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 6218206 - 6218290
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||| ||  || |||||||||| |||||| |||||||||||  |||||||   |||||||||||||||||||||    
T  6218206 acaatatgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagat 6218290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 6218440 - 6218524
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||||||| ||  || |||| ||||| |||||| ||||||| ||| ||||||||  || ||||||||||||||||||    
T  6218440 aacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaaccacgatttctaaga 6218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 35788661 - 35788745
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| ||||||| |||| |||||||  || |||||||||||||||||||    
T  35788661 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagat 35788745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 36685957 - 36685873
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||||||  ||| ||| ||||| |||||||| |||||||||| |||| ||   | |||||||||||||||||||    
T  36685957 acaatgtgtttataaatgggggttatcctcacctcacaagtcagttttgtggggttgtattagacccaaccacgatttctaagat 36685873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 52559569 - 52559653
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||| ||||||||||||    
T  52559569 acaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 52559653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 35788896 - 35788979
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||| | |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  35788896 acaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 41188014 - 41187931
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||| ||||||| | |||| |||| ||||| ||||||| ||||||||||| ||| |||  || ||||||||||||||||||    
T  41188014 acaatgtatttataagtaaaggcaatcctcacctcacaagttggttttgtggggttgagttatgcccaaccacgatttctaaga 41187931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 35609567 - 35609489
Alignment:
Q  23 gtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||| ||  || |||| ||||| ||||||||||||||||||| ||||||  | | ||||||||||||||||||    
T  35609567 gtgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgtaacacccaaccacgatttctaaga 35609489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 40717517 - 40717439
Alignment:
Q  24 tgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||| ||  || |||| ||||| || |||||||||||||||| |||||||  || |||||||||||||||||||    
T  40717517 tgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagat 40717439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 14783269 - 14783188
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  14783269 acaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 14783188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 20822003 - 20822056
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| |||||| ||||||||||||||||||||  || ||||||||||||||||    
T  20822003 tcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 20822056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 21498797 - 21498878
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  21498797 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 22231367 - 22231306
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  22231367 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 22231306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 25052854 - 25052935
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  |||||||  |||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  25052854 acaatttgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 28245608 - 28245527
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||| |||||||||||    
T  28245608 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 28245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 40726746 - 40726807
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| |||||| ||||||||| ||||||||||  || |||||||||||||||||||    
T  40726746 aatcctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaagat 40726807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 34358112 - 34358028
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||||||  || |||| ||||  || ||| |||||||||||| |||||||  || ||| |||||||||||||||    
T  34358112 acaatgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagat 34358028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 50543649 - 50543565
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||| ||||| ||  || |||| ||||| |||||| |||||||||||  |||||||  || |||||||||||||||||||    
T  50543649 acaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagat 50543565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 22827540 - 22827623
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| |||||||||| ||  || |||| ||||| |||||| ||||||||| || |||||||  || ||||||||||||||||||    
T  22827540 acaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 39902645 - 39902562
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| ||||||  ||||||||||| |||||||  || ||||||| ||||||||||    
T  39902645 acaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 9685423 - 9685481
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||| ||||| ||||||||||||||||| | |||||||  || ||||||||||||||||    
T  9685423 aatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaa 9685481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 9685633 - 9685715
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||||| ||||||||| ||  || |||| ||||| |||||| ||||||| |||| |||||||  || ||||||||||||||||    
T  9685633 aacaatttgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 400647 - 400566
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||| | |||||||  || ||||||| ||||||||    
T  400647 acaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaagctcaaccacaatttctaa 400566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 5398558 - 5398474
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  |  |||||| ||||||||||||    
T  5398558 aacaatgtgtttataactgg-ggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaaccatgatttctaagat 5398474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 12869322 - 12869261
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| || ||| |||||||||||| |||||||  || |||||||||||||||||||    
T  12869322 aatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaagat 12869261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 21498356 - 21498437
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| || ||||  || ||||||||||||||||    
T  21498356 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaa 21498437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 1518166 - 1518250
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||| ||  || |||| ||| | |||||| |||||||||||| |||||||  ||  ||||||||||||||||||    
T  1518166 acaatttgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagat 1518250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 35175037 - 35175124
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagattatt 106  Q
    |||||||||||||||  |  ||||||| ||||| ||||||||| |||||| || |||||||  || ||||||| |||||||||| ||||    
T  35175037 acaatgtgtttataagagggggtaatcatcacctcacaagtcgattttgtagggttgtgttaggcccaaccac-atttctaagagtatt 35175124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 44118941 - 44118881
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| | |||||||||| |||||||    
T  44118941 acaatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttgtgtt 44118881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 21861296 - 21861380
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||| || |||| |||||  ||||| ||||||||||||||||||||  || ||||||| |||||||||||    
T  21861296 acaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagat 21861380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 25620138 - 25620222
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  25620138 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25620222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 33996391 - 33996309
Alignment:
Q  20 aatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||| ||  || |||||||||| ||||||||||||||||||  |||||||  || |||||||||||||||||||    
T  33996391 aatgtatttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagat 33996309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 36277308 - 36277224
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| ||||||||| ||||||||| |||||||   | |||||||||||||||||||    
T  36277308 acaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagat 36277224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 43075392 - 43075309
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| |||||||||| ||  || |||| ||||| ||||||| ||||||||||| |||||||  || ||||||||||||||||||    
T  43075392 acaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttgagctcaaccacgatttctaaga 43075309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 43085619 - 43085536
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| |||||||||| ||  || |||| ||||| ||||||| ||||||||||| |||||||  || ||||||||||||||||||    
T  43085619 acaacgtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttaagctcaaccacgatttctaaga 43085536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48243143 - 48243060
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||| |||||    
T  48243143 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 36206146 - 36206064
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||||| ||||||||| || ||| |||||||||| |||||| ||||||| |||| |||| ||  || ||||||||||||||||    
T  36206146 aacaatttgtttataagtggaggcaatcttcacctcacaagccggttttatggggttgtattaggctcaaccacgatttctaa 36206064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 2544529 - 2544452
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||| ||||||||| ||  || |||| ||||| ||||||||||||||||||| |||||||  || ||||||||||||    
T  2544529 acaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgattt 2544452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 3038167 - 3038082
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||||||| ||  || |||| ||||  |||||| |||||||||||| |||||||  || |||||| ||||||||||||    
T  3038167 aacaatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 3038082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 29469607 - 29469688
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||||||||||||    
T  29469607 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 29469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 34027395 - 34027476
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  34027395 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 2404490 - 2404406
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| |   || |||| |||||||||||||||||||| | ||  ||||||  || |||||||||||||||||||    
T  2404490 acaatgtgtttataagtaggggcaatcctcaccccacaagtcggttttatagggctgtgttaagctcaaccacgatttctaagat 2404406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 21055035 - 21054951
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  21055035 acaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 26239998 - 26239914
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| ||||||||||| ||||||| |||||||   | ||||||| |||||||||||    
T  26239998 acaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagat 26239914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 31892412 - 31892472
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||| |||||| ||||||||||||  ||||||  || ||||||||||||||||||    
T  31892412 aatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaaga 31892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 40121978 - 40121922
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||| ||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  40121978 tcaccctacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 40121922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 47710445 - 47710529
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| | |||||||||| |||||||  || ||||||| |||||||||||    
T  47710445 acaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47710529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 47722101 - 47722185
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| | |||||||||| |||||||  || ||||||| |||||||||||    
T  47722101 acaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 2401362 - 2401439
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||||||||||||| ||  |  |||||||||  ||||||||| ||||||| |||||||||  || ||||||||||||    
T  2401362 acaatgtgtttataagtgtggacaatcttcacttcacaagtcgattttgtgagattgtgttaggctcaaccacgattt 2401439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 21821831 - 21821892
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||| | |||||  || |||||||||||||||||  || |||||||||||||||||||    
T  21821831 aatcttcatctcacaaaccgattttgtgggattgtgttaggcccaaccacgatttctaagat 21821892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 26562155 - 26562074
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||||||||| |||||| |||||||||||| || ||||  || ||||||| ||||||||    
T  26562155 acaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaa 26562074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 29469842 - 29469923
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||  |||||||  || ||||||||||||||||    
T  29469842 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 29469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 1000586 - 1000634
Alignment:
Q  53 acaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||| |||||||||||| |||| ||| || ||||||||||||||||||    
T  1000586 acaagacggttttgtggggttgtctttggcccaaccacgatttctaaga 1000634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 42985205 - 42985121
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| || ||| |||| ||||| ||||||||| ||||||| | |||||||   | ||||||  |||||||||||    
T  42985205 acaatgtgtttataagtggaggcaatcctcacctcacaagtcgattttgtgaggttgtgttagactcaaccataatttctaagat 42985121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 41667075 - 41666991
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  41667075 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 41666991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 28510093 - 28510176
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| |||||| |||| ||| | || ||| |||||||||||| |||||||  || ||||||||||||||||||    
T  28510093 acaatgtgtttataagtgaaggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 28510176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 41666839 - 41666756
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  41666839 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 27133075 - 27132994
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||| || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  27133075 acaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 2063815 - 2063732
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||| | |||||||||||||||||| |||||||  || |||||||||||||||||||    
T  2063815 acaatgtgtttataagtgggggcaatcctcactc-acaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagat 2063732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24346583 - 24346499
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| ||||||| |||| |||||||  || ||||||| |||||||||||    
T  24346583 acaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 24528542 - 24528626
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||| ||||||||||||    
T  24528542 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 24528626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 24531601 - 24531685
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| || ||||||||| |||||||  || |||||||||||||||||||    
T  24531601 acaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagat 24531685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 18333547 - 18333464
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| |||||||||||| |||||||  || ||||||| | ||||||||    
T  18333547 acaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 9368597 - 9368679
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||||||||||||| || ||| |||| ||||| |||||| |||||||||||| |||||||  || ||||||  |||||||||    
T  9368597 acaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaag 9368679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 12034697 - 12034775
Alignment:
Q  23 gtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||||  || |||| ||||| |||||| | ||||||| ||||||||||  || ||||||||||||||||||    
T  12034697 gtgtttataaatgggggaaatcctcacctcacaagccagttttgtaggattgtgttaggcccaaccacgatttctaaga 12034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 21209762 - 21209704
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatta 104  Q
    ||||| |||||| |||||||||||| |||||||  ||||||||||||||||||| ||||    
T  21209762 tcacctcacaagccggttttgtggggttgtgttaagcacaaccacgatttctaatatta 21209704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 25258153 - 25258091
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||||    
T  25258153 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 25258091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 25321943 - 25321881
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||||    
T  25321943 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 25321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 20225047 - 20225124
Alignment:
Q  22 tgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||| |  |||| ||||| ||||||||| ||||||||| |||||||  |  ||||||||||||||||    
T  20225047 tgtgtttataaatgaggacaatcctcacctcacaagtcgattttgtggggttgtgttaggttcaaccacgatttctaa 20225124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 25258360 - 25258299
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| ||||||||||||||||||| |||||||   | |||||||||||||||||||    
T  25258360 aatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagat 25258299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 25322150 - 25322089
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| ||||||||||||||||||| |||||||   | |||||||||||||||||||    
T  25322150 aatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagat 25322089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 15480324 - 15480408
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| ||||||  ||||||||||| || ||||  || |||||||||||||||||||    
T  15480324 acaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagat 15480408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 18333761 - 18333697
Alignment:
Q  38 ggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||| ||||| |||||| |||||||||||| |||||||  || ||||||||| |||||||||    
T  18333761 ggtaatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaagat 18333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 21306890 - 21306974
Alignment:
Q  19 caatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    |||||| ||||||| ||  || |||| ||||| |||||| |||| |||||||||||||||   | ||||||||||||||||||||    
T  21306890 caatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagatt 21306974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 21314728 - 21314812
Alignment:
Q  19 caatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    |||||| ||||||| ||  || |||| ||||| |||||| |||| |||||||||||||||   | ||||||||||||||||||||    
T  21314728 caatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagatt 21314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24269952 - 24269869
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| ||||||| |||| |||||||  || ||||||| |||||||||||    
T  24269952 acaatgtgtttataagtgg-ggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24269869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 38731920 - 38731836
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| |||    |||| ||||| ||||||||| ||||||| | |||||||  |||||||||| |||||||||||    
T  38731920 acaatgtgtttataagtgagaacaatcctcacctcacaagtcgattttgtgaggttgtgttaggcacaaccaccatttctaagat 38731836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 24487721 - 24487646
Alignment:
Q  24 tgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||| ||  ||||||| ||||| |||||| |||||||||| | |||||||  || ||||||||||||||||    
T  24487721 tgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaa 24487646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 8098342 - 8098400
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  8098342 aatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 8098400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 7607596 - 7607677
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| || ||  |||||||||| |||||| |||||||||||  |||||||  || |||||| |||||||||    
T  7607596 acaatctgtttataagtggagacaatcttcacctcacaagccggttttgtggagttgtgttaggcccaaccatgatttctaa 7607677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 15480584 - 15480645
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  15480584 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 15480645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 21209975 - 21209922
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  21209975 tcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 21209922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 1564649 - 1564565
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||| |||||| ||  || |||| ||||  |||||| | |||||||||| |||||||  || |||||||||||||||||||    
T  1564649 acaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaagat 1564565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 13296922 - 13296978
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| |||||  ||||||||||||||||||||   | |||||||||||||||||||    
T  13296922 tcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 13701150 - 13701066
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||  ||||||||  ||||||||||||||| | |||||  ||  ||||||||||||||||||    
T  13701150 acaatgtgtttataagtgggggcaattctcaccccaagagtcggttttgtggggtcgtgttaggcctaaccacgatttctaagat 13701066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24346819 - 24346735
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||| ||||||| ||  ||||||  ||||| |||||| |||||||||||| |||||||   | |||||||||||| ||||||    
T  24346819 acaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagat 24346735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 24647698 - 24647778
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttcta 98  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||  |||||||  |  |||||||||||||||    
T  24647698 acaatgtgtttataactggtggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttcta 24647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 26137393 - 26137345
Alignment:
Q  52 cacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||||| |||||||||||||| ||||  || |||||||||||||||||    
T  26137393 cacaagttggttttgtgggattatgttaggcccaaccacgatttctaag 26137345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 29909561 - 29909509
Alignment:
Q  26 tttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||| || ||| |||| ||||| ||||| |||||||||||||||||||||    
T  29909561 tttataagtggaggcaatcctcacctcacaaatcggttttgtgggattgtgtt 29909509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 37657019 - 37656967
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtggg 70  Q
    ||||||||||||||| ||  ||||||| | ||| |||||||||||||||||||    
T  37657019 acaatgtgtttataagtgggggtaatccttacctcacaagtcggttttgtggg 37656967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 43117884 - 43117968
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||||||| || |||| ||| | |||||| ||||||| | || |||||||  || |||| ||||||| ||||||    
T  43117884 acaatgtgtttataaatgagggcaatcctcatctcacaagccggttttatagggttgtgttaggcccaacaacgatttttaagat 43117968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 16239593 - 16239677
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || || | ||||| |||||| ||||||||||||||||||||  || |||||||||||||||||||    
T  16239593 acaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagat 16239677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 16927031 - 16926947
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  ||||||| ||| | |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  16927031 acaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagat 16926947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 54567894 - 54567978
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  54567894 acaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 54567978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 31317232 - 31317314
Alignment:
Q  19 caatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||||| ||  || |||| ||||| |||||| ||||||||||||||||||||  || |||||||||||||||||||    
T  31317232 caatgtgtttataagtgg-ggcaatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagat 31317314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 35038276 - 35038193
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  35038276 acaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 39683350 - 39683268
Alignment:
Q  18 acaatgtgtttataaa-tgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||||||||||||||| || ||| |||| ||||| |||||| ||||||||||||||||| ||  || ||||||||||||||||    
T  39683350 acaatgtgtttataaagtggaggcaatcctcacctcacaagacggttttgtgggattgtattaggctcaaccacgatttctaa 39683268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 1723158 - 1723074
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  1723158 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 1723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 30179790 - 30179706
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  ||||||| ||||| |||||||| ||||||| ||||| ||||  || |||||||||||| ||||||    
T  30179790 acaatgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaaccacgatttataagat 30179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 11589787 - 11589868
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  11589787 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 11589868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 24866222 - 24866283
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  24866222 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 20303146 - 20303062
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||| ||||||| ||  || |||| ||||| |||||  ||||||||||||||||||||  || |||||||||||| ||||||    
T  20303146 acaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacgatttttaagat 20303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 4155331 - 4155410
Alignment:
Q  23 gtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||| ||  || |||| ||||| || ||| |||||||||||| |||||||  || |||||||||||||||||||    
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4155410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 8018993 - 8019055
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||| ||||||||||||    
T  8018993 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagatt 8019055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 54368520 - 54368602
Alignment:
Q  20 aatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||| ||  || |||| ||||| |||||| ||||||| |||| |||||||   | |||||||||||||||||||    
T  54368520 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagat 54368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 6487415 - 6487338
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||| ||||||||| || |||||||| ||||| |||||| ||||||| |||| |||| ||  || ||||||||||||    
T  6487415 acaatttgtttataagtggaggtaatcctcacctcacaagccggttttatggggttgttttaggcccaaccacgattt 6487338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 20327696 - 20327619
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||||| ||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||    
T  20327696 acaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 20327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 20327931 - 20327850
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||| |||||||||    
T  20327931 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaa 20327850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 21809200 - 21809143
Alignment:
Q  47 caccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatta 104  Q
    |||| |||||| ||||||||| ||||||||||  || ||| |||||||||||||||||    
T  21809200 cacctcacaagccggttttgtaggattgtgttaagctcaaacacgatttctaagatta 21809143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 39620328 - 39620413
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatt 103  Q
    ||||||||||||||| ||  ||||| |  |||| || ||| | |||||||||| |||||||  || ||||||||||||||||||||    
T  39620328 acaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgttaagcccaaccacgatttctaagatt 39620413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 13574738 - 13574686
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttcta 98  Q
    ||||| |||||| |||||||||||| |||||||  || |||||||||||||||    
T  13574738 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttcta 13574686  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 34610586 - 34610646
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| ||||||||||||||||||| |||||||   | ||||||| ||||||||||    
T  34610586 aatcctcacctcacaagtcggttttgtggggttgtgttagacccaaccacaatttctaaga 34610646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 35038510 - 35038426
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  |||||  ||||||||||| |||||||  || ||||||||| |||||||||    
T  35038510 acaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagat 35038426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 39269333 - 39269393
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||| |||||||||||    
T  39269333 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgtt 39269393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 50083163 - 50083079
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgt-gggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| ||||||||| ||| |||||||  || |||||| |||||||||||    
T  50083163 acaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgggggttgtgttaggcccaaccatgatttctaaga 50083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2029771 - 2029855
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| || ||| |||| ||||| |||||| |||||||||||| |||| ||  || |||||||||||||||||||    
T  2029771 acaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagat 2029855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2030006 - 2030090
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| || ||| |||| ||||| |||||| |||||||||||| |||| ||  || |||||||||||||||||||    
T  2030006 acaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagat 2030090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 16419504 - 16419587
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  16419504 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 17854774 - 17854693
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||| | |||||||||||||||||||||||||||  || ||||||||||||||||    
T  17854774 acaatctgtttataagtgggggcaatcatcatctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaa 17854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 15124861 - 15124781
Alignment:
Q  22 tgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||| ||| || |||||||||  ||||| ||||||||||||| |||||||   | |||||||||||||||||||    
T  15124861 tgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagat 15124781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 37840339 - 37840423
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| || ||| |||| ||||| |||||| |||||||||||| |||||||  || ||||||| |||| ||||||    
T  37840339 acaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttgggcccaaccacaatttttaagat 37840423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 40379522 - 40379442
Alignment:
Q  22 tgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  40379522 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 40379442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 5711521 - 5711438
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  5711521 acaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 40379287 - 40379208
Alignment:
Q  22 tgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  40379287 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 29718330 - 29718412
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||| ||||||||| ||| || |||| ||||| |||||| |||||||||||| |||||||  ||  ||||||||||||||||    
T  29718330 acaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaag 29718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 33606369 - 33606287
Alignment:
Q  20 aatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||| ||  ||||||| ||||| |||||| | |||||||||  || ||||  ||||||||||||||||||||||    
T  33606369 aatgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagat 33606287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 10523021 - 10523102
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||||||||||||  |  |||||||||| | |||| |  |||||||||||||||||  || ||||||||||||||||    
T  10523021 acaatgtgtttataaatggtgacaatcttcacctcgcaagccatttttgtgggattgtgttaggcccaaccacgatttctaa 10523102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 10570995 - 10571056
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||  ||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  10570995 aatcttcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaagat 10571056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 28407876 - 28407791
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||  |||||||  || |||||||||||||||||||    
T  28407876 aacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagat 28407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 17719402 - 17719486
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| ||||||||| || |||||||  || ||||||| |||||||||||    
T  17719402 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagat 17719486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 19571053 - 19570973
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||| ||  || |||| ||||| || |||||| |||||||| ||||||||  || ||||||||||||||||||    
T  19571053 atgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaaga 19570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 27897660 - 27897604
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||||||||||||| |||||||  || ||||||| |||||||||||    
T  27897660 tcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagat 27897604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 30063346 - 30063266
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||| ||  | ||||| ||||| |||||| |||||||||| | |||||| | || ||||||||||||||||||    
T  30063346 atgtgtttataagtggggataatcatcaccacacaagccggttttgtgaggttgtgtatggcccaaccacgatttctaaga 30063266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 17525420 - 17525361
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgt 77  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||||||||||    
T  17525420 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgt 17525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 21591807 - 21591866
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    |||||||||| || ||||||||||| |||| |||||||  || |||||||||||||||||    
T  21591807 aatcttcacctcataagtcggttttatggggttgtgttaggcccaaccacgatttctaag 21591866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 2324476 - 2324554
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttc 96  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||    
T  2324476 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttc 2324554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 5594029 - 5594106
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||| |||||||||| ||  |||||| |||||| ||||||||||||||| |||||||||||  || ||| ||||||||    
T  5594029 aacaacgtgtttataagtgg-ggtaattttcacctcacaagtcggttttgcgggattgtgttaggctcaatcacgattt 5594106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 9927913 - 9927999
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatta 104  Q
    ||||||||||||||| ||  ||||||| ||||| ||||||  | |||| |||| ||||||| ||  ||||||||| |||||||||||    
T  9927913 acaatgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgttacgtccaaccacgaattctaagatta 9927999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 19191669 - 19191611
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  19191669 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19191611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 31700798 - 31700744
Alignment:
Q  47 caccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  31700798 cacctcacaagccggttttgtgggtttgtgttaggcccaaccacgatttctaaga 31700744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 1926503 - 1926446
Alignment:
Q  38 ggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||  || ||||||||||||    
T  1926503 ggtaatcctcacctcacaaatcggttttgtaggattgtgttaggctcaaccacgattt 1926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 2324242 - 2324319
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgattt 95  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||    
T  2324242 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 2324319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 5509081 - 5509162
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  ||||||| ||||| ||||||  ||||||||||| |||||||  || |||||| |||||||||    
T  5509081 acaatttgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaa 5509162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 17855011 - 17854930
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||| || |||| ||||| |||||| |||||||||||| ||||| |   | ||||||||||||||||    
T  17855011 acaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaa 17854930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 5711757 - 5711673
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  | ||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  5711757 acaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 5711673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 14466492 - 14466408
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||   | |||| |||||  ||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  14466492 acaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 14466408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 14927104 - 14927188
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| || ||||| | |||||| | |||||||  || |||||||||||||||||||    
T  14927104 acaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagat 14927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 16419297 - 16419353
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| |||||| |||||||||||| |||| ||  || |||||||||||||||||||    
T  16419297 tcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagat 16419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 24396130 - 24396162
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||||||||||||||||||||| |||||||    
T  24396130 tcaccccacaagtcggttttgtggggttgtgtt 24396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 30006658 - 30006578
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||| ||  | ||||| ||||| |||||| |||||||||| | ||||||   || ||||||||||||||||||    
T  30006658 atgtgtttataagtggggataatcatcaccacacaagccggttttgtgaggttgtgtacggcccaaccacgatttctaaga 30006578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 4113088 - 4113004
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  4113088 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 4113004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 40079154 - 40079237
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  40079154 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 3169768 - 3169849
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||||||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  3169768 acaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 3169849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 17452910 - 17452826
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||| ||||||| ||  || |||||||||| |||||| |||||||||||| |||||||  ||  ||||||||||||||||||    
T  17452910 acaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagat 17452826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 4112622 - 4112539
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| |   || |||| ||||| |||||| || |||| ||||||||||||  |||||||||||||||||||||    
T  4112622 acaatgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaaga 4112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 17452761 - 17452680
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||| ||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  17452761 acaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 51588994 - 51589075
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||| || |||| ||||| |||||| |||||||||||| |||||||  || ||||||| ||||||||    
T  51588994 acaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 51589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 51589228 - 51589309
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||| || |||| ||||| |||||| |||||||||||| |||||||  ||  |||||||||||||||    
T  51589228 acaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaa 51589309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 51589808 - 51589889
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||| || |||| ||||| |||||| || ||||||||| |||||||  || ||||||||||||||||    
T  51589808 acaatttgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 51589889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 25145567 - 25145483
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||| | ||  || |||| ||||| ||||||||||||||||| | |||||||   | |||||||||||||||||||    
T  25145567 acaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagat 25145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 25255341 - 25255397
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  25255341 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25255397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 35772266 - 35772350
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| | ||| || ||| |||||||||||| |||||||  || |||||||||||||||||||    
T  35772266 acaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 38668362 - 38668422
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||||||||||| ||  || |||| |||||  ||||||||||||||||||||||||||    
T  38668362 acaatgtgtttataagtgggggcaatcatcaccttacaagtcggttttgtgggattgtgtt 38668422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 5109255 - 5109312
Alignment:
Q  20 aatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||| ||||||||||| | ||||||||||| ||||||| | |||||||||||||||||    
T  5109255 aatgtatttataaatga-gataatcttcacctcacaagttgtttttgtgggattgtgtt 5109312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 38733187 - 38733237
Alignment:
Q  52 cacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||||| |||||||||  |  |||||||||||||||||||    
T  38733187 cacaagtcggttttgtgagattgtgttaggttcaaccacgatttctaagat 38733237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 41035908 - 41035826
Alignment:
Q  19 caatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||||||| ||  || |||| ||||| |||||| ||||||||||||||||||||  |  |||| |||||||||||||    
T  41035908 caatatgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 51590063 - 51590121
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    |||| ||||| |||||| ||||||||||||||||||||  || ||| ||||||||||||    
T  51590063 aatcctcacctcacaagccggttttgtgggattgtgttaggcccaagcacgatttctaa 51590121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 7307722 - 7307807
Alignment:
Q  17 aacaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||||||| || ||| |||  ||||| |||||||||||||||| ||||| ||||  ||  |||||  |||||||||||    
T  7307722 aacaatgtgtttataagtggaggcaattctcacctcacaagtcggttttgttggattatgttaggcctaaccataatttctaagat 7307807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 31432289 - 31432228
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| |||||| |||||||||||| ||||| |  || |||||||||||||||||||    
T  31432289 aatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaagat 31432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 33157260 - 33157309
Alignment:
Q  55 aagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatta 104  Q
    |||||||||||||||| |||||||  || ||| |||||||||||||||||    
T  33157260 aagtcggttttgtggggttgtgttaggcccaatcacgatttctaagatta 33157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 35772054 - 35772115
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| | |||| |||||||||||| |||||||  || |||||||||||||||||||    
T  35772054 aatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 4098482 - 4098403
Alignment:
Q  20 aatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||||||||||| ||  || |||| |||||  |||||| ||||||||||| |||||||  || |||||||||||||||||    
T  4098482 aatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtggg-ttgtgttaggcccaaccacgatttctaag 4098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 26176910 - 26176994
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||| |||||| ||| || |||| ||||| || ||  |||||||||||| |||||||  || ||||| |||||||||||||    
T  26176910 acaatgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagat 26176994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 41066944 - 41067024
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||| || |||||||||||||| |||||  ||||| |||||| |||| ||  || ||||||| |||| |||||    
T  41066944 atgtgtttataagtggaggtaatcttcacctcacaaaccggttgtgtgggcttgttttaggcccaaccacaatttataaga 41067024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 49142510 - 49142594
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||| || ||| || ||||  |||| |||||||||  | ||||||||||||||  || ||||||| |||||||||||    
T  49142510 acaatgtgtttagaagtgagggcaatccccacctcacaagtcgaatatgtgggattgtgttaggctcaaccaccatttctaagat 49142594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24532503 - 24532419
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||| ||||||||||||    
T  24532503 acaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagat 24532419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 36917521 - 36917437
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||| ||||||| ||  ||||||| ||||  |||||||| |||||||||| |||||||  |||||||||| |||||||||||    
T  36917521 acaatgtatttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagcacaaccaccatttctaagat 36917437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 39053011 - 39052927
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||| ||||||||||||||    
T  39053011 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagat 39052927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 35682863 - 35682780
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| | |||| |||||||||||| |||||||  || ||||||||||||||||||    
T  35682863 acaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 10615018 - 10614937
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||| |||||  ||||||||||||| |||||| || ||||||||| |||| ||  || |||||||||||| ||||||    
T  10615018 atgtgtttacaaatgggggtaatcttcacctcacaagccgattttgtggggttgtattaggctcaaccacgatttataagat 10614937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 17469820 - 17469901
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  17469820 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 17477067 - 17477148
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  17477067 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 19256668 - 19256587
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  19256668 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 11232276 - 11232192
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  11232276 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 11232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 11232511 - 11232427
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  11232511 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 11232427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 12317048 - 12317132
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| || |||  | |||||||||||||||||  || |||||||||||||||||||    
T  12317048 acaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagat 12317132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 12547123 - 12547183
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||| |||||| |||||||||||| |||||||  || |||| |||||||||||||    
T  12547123 aatcttcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 12547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 18004178 - 18004094
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||| ||||||||| ||  || |||| |||||||| |||||||||||||| | |||||||  || |||||| ||||||||||||    
T  18004178 acaatatgtttataagtgggggcaatcctcaccccataagtcggttttgtgaggttgtgttaggcccaaccaagatttctaagat 18004094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 22638238 - 22638178
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  22638238 aatcctcaccacacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 22638178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 37001500 - 37001552
Alignment:
Q  52 cacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagatta 104  Q
    |||||| |||||||||||| |||||||  || |||||||||||||||||||||    
T  37001500 cacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatta 37001552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 39960217 - 39960277
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  39960217 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 42846664 - 42846604
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||||    
T  42846664 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 10450002 - 10450085
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| ||||| || ||| ||||||||| || |||||||  || ||||||||||||||||||    
T  10450002 acaatgtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaaga 10450085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 24075382 - 24075307
Alignment:
Q  24 tgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 8929019 - 8929101
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||||||||||||| ||  || ||||  |||| |||||| |||||||||||| |||||||  || ||||||||| |||||||    
T  8929019 acaatgtgtttataactgggggcaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaag 8929101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 15686094 - 15686040
Alignment:
Q  46 tcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaag 100  Q
    ||||| |||||| ||||||||||||||||||||   | |||||||||||||||||    
T  15686094 tcacctcacaagccggttttgtgggattgtgttagactcaaccacgatttctaag 15686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 10884090 - 10884150
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||| ||||| |||||| |||||||||||| |||||||  || |||||||||||||||||||    
T  10884090 aatcctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagat 10884150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 19256902 - 19256821
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| ||||||  ||||||||||| |||||||  || ||||||||||||||||    
T  19256902 acaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaa 19256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 34653153 - 34653233
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||| ||||||| | ||  |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  34653153 acaatttgtttataagtga-ggtaatcctaacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 34842680 - 34842761
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| || | |||||||||||||| |||||||  || ||||||||||||||||    
T  34842680 acaatttgtttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaa 34842761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 42049766 - 42049685
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||| ||  || |||| |||||||||||| |||||||||| | ||||| |  ||  ||||||||||||||||||    
T  42049766 atgtgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggcctaaccacgatttctaagat 42049685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 4828295 - 4828375
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttcta 98  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||| |||||||    
T  4828295 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 5932031 - 5931943
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagattatt 106  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| || ||||  || ||||||| |||| ||||| ||||    
T  5932031 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccatttttaagaatatt 5931943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 20301263 - 20301347
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| | ||| |||||| | |||||||| | |||||||  || |||||||||||||||||||    
T  20301263 acaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagat 20301347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 21087895 - 21087979
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| | ||| |||||| | |||||||| | |||||||  || |||||||||||||||||||    
T  21087895 acaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagat 21087979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 27204989 - 27205049
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| || ||| |||||||||||| |||||||  || ||||||||||||||||||    
T  27204989 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 27205087 - 27205147
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| || ||| |||||||||||| |||||||  || ||||||||||||||||||    
T  27205087 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 27205185 - 27205245
Alignment:
Q  41 aatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||| ||||| || ||| |||||||||||| |||||||  || ||||||||||||||||||    
T  27205185 aatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 31197617 - 31197700
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| | | ||||||  ||||| || ||||||||||||| || |||||||  || |||||| ||||||||||||    
T  31197617 acaatgtgtttataagtaagggtaattctcacctcaaaagtcggttttgtagggttgtgttaggcccaacca-gatttctaagat 31197700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 38447509 - 38447449
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtt 78  Q
    ||||||||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||    
T  38447509 acaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtt 38447449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 40014663 - 40014743
Alignment:
Q  21 atgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    |||||||||||| ||  || |||||||||  ||||||||||||||||||| || |||   ||  |||||||||||||||||    
T  40014663 atgtgtttataagtgggggcaatcttcacttcacaagtcggttttgtgggcttctgtcaggccaaaccacgatttctaaga 40014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 41790661 - 41790744
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  |  |||| ||||| || ||| |||||||||||| |||||||  || |||||||||||||||||||    
T  41790661 acaatgtgtttataagtggggacaatcctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagat 41790744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 81879 - 81928
Alignment:
Q  53 acaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    |||||||||||||||||| |||||||  || |||||||||||||||||||    
T  81879 acaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagat 81928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 56461 - 56542
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaa 99  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || ||||||||||||||||    
T  56461 acaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 56542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 5836 - 5752
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||| | |||||| |||||||| ||| |||||||  || |||||||||||||||||||    
T  5836 acaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagat 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 1918 - 2002
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||| |||||||||||    
T  1918 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 2002  T

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Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 2153 - 2236
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaaga 101  Q
    ||||||||||||||| ||  || |||| |||||  ||||| |||||||||||| |||||||  || ||||||| ||||||||||    
T  2153 acaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2236  T

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Target: scaffold0129 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 14305 - 14389
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  |  |||| ||||| |||||| |||||||||||| |||||||  || |||||||| ||||||||||    
T  14305 acaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagat 14389  T

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Target: scaffold0092 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 5657 - 5741
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  ||||||| ||| |  ||||| |||||||||||| |||||||   | |||||||||||||||||||    
T  5657 acaatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccacgatttctaagat 5741  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 51238 - 51322
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttctaagat 102  Q
    ||||||||||||||| ||  || |||| ||||| |||||||| |||||||||| |||||||  || ||| ||| |||||||||||    
T  51238 acaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgctcaatcacaatttctaagat 51322  T

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Target: scaffold0766 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 6276 - 6355
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttct 97  Q
    ||||||||||||||| ||  || |||| ||||| |||||| || ||||||||| |||||||  || ||||||||||||||    
T  6276 acaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttct 6355  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 4511 - 4431
Alignment:
Q  18 acaatgtgtttataaatgaaggtaatcttcaccccacaagtcggttttgtgggattgtgtttcgcacaaccacgatttcta 98  Q
    ||||| ||||||||| ||  || |||| ||||| |||||| |||||||||||| |||||||  || |||||| ||||||||    
T  4511 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccatgatttcta 4431  T

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