View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16572_low_36 (Length: 220)

Name: NF16572_low_36
Description: NF16572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16572_low_36
NF16572_low_36
[»] chr2 (36 HSPs)
chr2 (1-205)||(44282685-44282886)
chr2 (1-170)||(14380649-14380818)
chr2 (1-170)||(31686305-31686474)
chr2 (1-170)||(40255052-40255221)
chr2 (1-170)||(31787192-31787361)
chr2 (6-156)||(7474086-7474236)
chr2 (8-166)||(17481337-17481495)
chr2 (1-162)||(13896532-13896692)
chr2 (1-162)||(14037149-14037309)
chr2 (1-166)||(35457570-35457735)
chr2 (8-166)||(43341667-43341825)
chr2 (6-166)||(2442621-2442781)
chr2 (6-163)||(43695580-43695737)
chr2 (9-156)||(37640155-37640302)
chr2 (6-142)||(16765683-16765819)
chr2 (1-166)||(32496591-32496759)
chr2 (1-166)||(44003192-44003354)
chr2 (11-164)||(19860809-19860962)
chr2 (1-131)||(33597594-33597724)
chr2 (8-166)||(31047784-31047942)
chr2 (167-205)||(14379851-14379889)
chr2 (167-205)||(40254535-40254573)
chr2 (93-142)||(16467046-16467095)
chr2 (89-141)||(3853861-3853913)
chr2 (6-46)||(31686280-31686320)
chr2 (173-205)||(31686770-31686802)
chr2 (6-46)||(31787346-31787386)
chr2 (6-46)||(40255206-40255246)
chr2 (6-46)||(44282871-44282911)
chr2 (6-45)||(13896678-13896717)
chr2 (6-45)||(14037295-14037334)
chr2 (90-148)||(3680728-3680786)
chr2 (89-139)||(40951714-40951764)
chr2 (89-142)||(18511062-18511115)
chr2 (6-46)||(14380803-14380843)
chr2 (6-46)||(34433286-34433326)
[»] chr1 (57 HSPs)
chr1 (1-205)||(36495865-36496066)
chr1 (1-170)||(26821879-26822048)
chr1 (1-170)||(38627761-38627930)
chr1 (1-170)||(50978311-50978480)
chr1 (1-170)||(51487860-51488029)
chr1 (1-170)||(5270991-5271160)
chr1 (1-170)||(15353702-15353871)
chr1 (1-170)||(26999776-26999945)
chr1 (1-170)||(7592691-7592859)
chr1 (21-170)||(38843859-38844008)
chr1 (1-166)||(31099848-31100013)
chr1 (6-167)||(6706666-6706827)
chr1 (6-166)||(42137088-42137249)
chr1 (9-147)||(16342861-16342999)
chr1 (21-162)||(46408024-46408164)
chr1 (1-166)||(41512692-41512856)
chr1 (8-169)||(45179870-45180031)
chr1 (1-166)||(47655090-47655255)
chr1 (8-156)||(50031388-50031536)
chr1 (6-165)||(11829559-11829718)
chr1 (19-162)||(35606868-35607011)
chr1 (6-166)||(7385764-7385927)
chr1 (6-118)||(24076060-24076172)
chr1 (8-160)||(46033131-46033282)
chr1 (24-166)||(4484640-4484782)
chr1 (8-141)||(1763271-1763404)
chr1 (67-166)||(27576681-27576780)
chr1 (35-142)||(50521036-50521143)
chr1 (22-166)||(11050534-11050679)
chr1 (8-136)||(44740674-44740802)
chr1 (20-153)||(49431179-49431313)
chr1 (91-166)||(27067670-27067745)
chr1 (89-166)||(13509409-13509487)
chr1 (167-205)||(5271480-5271518)
chr1 (167-205)||(7593180-7593218)
chr1 (167-205)||(27000243-27000281)
chr1 (167-205)||(38843342-38843380)
chr1 (167-205)||(51488472-51488510)
chr1 (89-142)||(15884201-15884254)
chr1 (90-148)||(46581283-46581341)
chr1 (167-205)||(50979212-50979250)
chr1 (6-46)||(15353856-15353896)
chr1 (6-46)||(26822033-26822073)
chr1 (6-46)||(26999751-26999791)
chr1 (6-46)||(36495840-36495880)
chr1 (6-46)||(38627915-38627955)
chr1 (6-46)||(50978286-50978326)
chr1 (6-46)||(51487835-51487875)
chr1 (6-45)||(5270966-5271005)
chr1 (6-45)||(27576833-27576872)
chr1 (89-142)||(23628803-23628856)
chr1 (8-92)||(27068432-27068516)
chr1 (8-45)||(41512842-41512879)
chr1 (90-142)||(41904-41956)
chr1 (6-46)||(20800260-20800300)
chr1 (6-46)||(35569185-35569225)
chr1 (89-133)||(35569300-35569344)
[»] chr3 (46 HSPs)
chr3 (1-205)||(47697190-47697403)
chr3 (1-170)||(1528050-1528219)
chr3 (1-170)||(47140735-47140904)
chr3 (1-170)||(38469725-38469894)
chr3 (1-170)||(51124755-51124924)
chr3 (1-170)||(52693084-52693253)
chr3 (8-166)||(30811251-30811409)
chr3 (6-169)||(28884218-28884381)
chr3 (8-166)||(33025181-33025339)
chr3 (6-166)||(48253892-48254052)
chr3 (1-156)||(11264250-11264405)
chr3 (23-166)||(33329372-33329515)
chr3 (8-166)||(48181608-48181766)
chr3 (6-166)||(42074877-42075037)
chr3 (8-166)||(39252024-39252182)
chr3 (8-166)||(50392218-50392376)
chr3 (2-166)||(51230247-51230411)
chr3 (23-166)||(39267073-39267216)
chr3 (6-168)||(45488498-45488660)
chr3 (36-149)||(44329195-44329308)
chr3 (6-149)||(45151168-45151315)
chr3 (10-150)||(42275090-42275235)
chr3 (23-166)||(40237799-40237942)
chr3 (6-163)||(41536321-41536478)
chr3 (43-162)||(44610267-44610385)
chr3 (7-129)||(5104700-5104822)
chr3 (89-165)||(53686564-53686640)
chr3 (69-167)||(40244040-40244138)
chr3 (167-205)||(38469259-38469297)
chr3 (167-205)||(47141378-47141416)
chr3 (167-205)||(51128991-51129029)
chr3 (167-205)||(52692118-52692156)
chr3 (42-127)||(52764662-52764750)
chr3 (167-205)||(1527722-1527760)
chr3 (6-46)||(1528204-1528244)
chr3 (89-133)||(31618984-31619028)
chr3 (6-46)||(38469879-38469919)
chr3 (6-46)||(47140710-47140750)
chr3 (6-46)||(47697388-47697428)
chr3 (6-46)||(52693238-52693278)
chr3 (6-45)||(51124730-51124769)
chr3 (90-148)||(14651199-14651257)
chr3 (89-142)||(37698486-37698539)
chr3 (88-145)||(42475657-42475714)
chr3 (89-133)||(23496284-23496328)
chr3 (6-42)||(31813893-31813929)
[»] chr8 (45 HSPs)
chr8 (1-170)||(193928-194097)
chr8 (1-170)||(30211126-30211295)
chr8 (1-170)||(34773814-34773983)
chr8 (1-170)||(30982595-30982764)
chr8 (1-170)||(629256-629425)
chr8 (34-170)||(721532-721668)
chr8 (34-170)||(882639-882775)
chr8 (6-166)||(924573-924733)
chr8 (8-156)||(35801708-35801856)
chr8 (6-166)||(26575770-26575930)
chr8 (8-162)||(44240658-44240811)
chr8 (1-166)||(45275787-45275952)
chr8 (8-166)||(2026056-2026214)
chr8 (6-166)||(8417202-8417362)
chr8 (69-166)||(13016219-13016316)
chr8 (9-135)||(17073628-17073754)
chr8 (9-135)||(17574516-17574642)
chr8 (1-166)||(23018253-23018418)
chr8 (38-166)||(36821050-36821176)
chr8 (6-103)||(11071082-11071179)
chr8 (58-136)||(2598506-2598584)
chr8 (167-205)||(189824-189862)
chr8 (167-205)||(717428-717466)
chr8 (167-205)||(878535-878573)
chr8 (167-205)||(30984278-30984316)
chr8 (167-205)||(34774324-34774362)
chr8 (167-205)||(30210585-30210623)
chr8 (89-142)||(3619165-3619218)
chr8 (6-46)||(194082-194122)
chr8 (1-33)||(308902-308934)
chr8 (6-46)||(308919-308959)
chr8 (6-46)||(30211280-30211320)
chr8 (6-46)||(30982570-30982610)
chr8 (6-46)||(34773789-34773829)
chr8 (6-45)||(629411-629450)
chr8 (90-148)||(2071665-2071723)
chr8 (88-142)||(35615668-35615722)
chr8 (89-142)||(32606549-32606602)
chr8 (1-46)||(36820933-36820978)
chr8 (89-142)||(41289155-41289208)
chr8 (1-45)||(308905-308949)
chr8 (89-141)||(15206656-15206708)
chr8 (89-141)||(24297688-24297740)
chr8 (92-136)||(37458403-37458447)
chr8 (6-46)||(41289040-41289080)
[»] chr7 (35 HSPs)
chr7 (1-170)||(31011981-31012150)
chr7 (1-170)||(25340962-25341131)
chr7 (1-166)||(25191249-25191414)
chr7 (8-162)||(12910462-12910615)
chr7 (6-166)||(298062-298221)
chr7 (6-166)||(26826915-26827075)
chr7 (6-166)||(4035882-4036042)
chr7 (6-142)||(25472165-25472301)
chr7 (1-169)||(32451295-32451464)
chr7 (6-166)||(15000416-15000576)
chr7 (8-152)||(47085236-47085380)
chr7 (3-166)||(1999615-1999778)
chr7 (8-166)||(43664242-43664400)
chr7 (8-156)||(26827158-26827306)
chr7 (20-164)||(41065305-41065449)
chr7 (38-165)||(39857517-39857644)
chr7 (23-157)||(40233849-40233983)
chr7 (1-166)||(30139217-30139382)
chr7 (6-166)||(39957900-39958059)
chr7 (6-116)||(37371257-37371367)
chr7 (8-150)||(30825715-30825856)
chr7 (69-166)||(11341955-11342052)
chr7 (10-116)||(45203101-45203207)
chr7 (23-149)||(26169336-26169459)
chr7 (167-205)||(31012379-31012417)
chr7 (167-205)||(25341421-25341459)
chr7 (91-141)||(41625599-41625649)
chr7 (6-52)||(47157666-47157712)
chr7 (6-46)||(31011956-31011996)
chr7 (91-142)||(2839263-2839314)
chr7 (8-67)||(20388767-20388826)
chr7 (88-142)||(39634248-39634302)
chr7 (89-142)||(40903251-40903304)
chr7 (6-46)||(25340937-25340977)
chr7 (92-152)||(40725867-40725927)
[»] chr6 (18 HSPs)
chr6 (1-170)||(30019762-30019931)
chr6 (21-162)||(21515110-21515250)
chr6 (8-156)||(10683721-10683869)
chr6 (17-166)||(27825541-27825690)
chr6 (1-165)||(20837899-20838063)
chr6 (43-166)||(31745441-31745564)
chr6 (67-166)||(4147374-4147473)
chr6 (36-152)||(921607-921722)
chr6 (89-140)||(29409348-29409399)
chr6 (91-141)||(29682119-29682169)
chr6 (167-205)||(30018964-30019002)
chr6 (6-46)||(5584031-5584071)
chr6 (6-46)||(30019916-30019956)
chr6 (6-45)||(4147494-4147533)
chr6 (89-140)||(13739159-13739210)
chr6 (89-140)||(13744659-13744710)
chr6 (91-141)||(16122100-16122150)
chr6 (89-142)||(21254975-21255028)
[»] chr5 (42 HSPs)
chr5 (1-170)||(29541806-29541975)
chr5 (1-170)||(3260322-3260491)
chr5 (1-170)||(42663919-42664088)
chr5 (6-205)||(14083004-14083200)
chr5 (1-205)||(33115147-33115348)
chr5 (6-169)||(33082342-33082505)
chr5 (6-162)||(27737954-27738110)
chr5 (1-166)||(31905981-31906146)
chr5 (6-166)||(33386873-33387033)
chr5 (21-166)||(10900676-10900821)
chr5 (1-166)||(41741612-41741777)
chr5 (6-162)||(33232993-33233148)
chr5 (6-156)||(37046116-37046266)
chr5 (21-162)||(7071434-7071577)
chr5 (4-156)||(25256232-25256384)
chr5 (4-156)||(25320021-25320173)
chr5 (6-166)||(4295474-4295634)
chr5 (7-166)||(11017831-11017990)
chr5 (23-166)||(40979959-40980102)
chr5 (8-142)||(41039549-41039683)
chr5 (38-166)||(8957929-8958057)
chr5 (67-166)||(2526848-2526947)
chr5 (24-167)||(39236044-39236186)
chr5 (6-166)||(53036-53196)
chr5 (8-116)||(19357056-19357164)
chr5 (6-166)||(20069081-20069241)
chr5 (167-205)||(3260815-3260853)
chr5 (167-205)||(29542418-29542456)
chr5 (167-205)||(42663547-42663585)
chr5 (8-81)||(29367038-29367110)
chr5 (89-142)||(7178743-7178796)
chr5 (89-141)||(19784778-19784831)
chr5 (6-46)||(3260297-3260337)
chr5 (90-142)||(4569176-4569228)
chr5 (6-46)||(42664073-42664113)
chr5 (6-45)||(2526968-2527007)
chr5 (6-45)||(4295625-4295664)
chr5 (89-140)||(32454504-32454555)
chr5 (89-142)||(3747684-3747737)
chr5 (89-133)||(22482163-22482207)
chr5 (6-46)||(22482282-22482322)
chr5 (6-46)||(29541781-29541821)
[»] chr4 (50 HSPs)
chr4 (1-170)||(24035586-24035755)
chr4 (1-170)||(39382404-39382573)
chr4 (1-170)||(49128200-49128369)
chr4 (1-170)||(24247089-24247258)
chr4 (6-166)||(16202532-16202692)
chr4 (10-166)||(39733359-39733515)
chr4 (6-166)||(29385445-29385605)
chr4 (1-166)||(28963252-28963417)
chr4 (17-166)||(50523279-50523428)
chr4 (6-166)||(26459526-26459686)
chr4 (6-166)||(45106320-45106480)
chr4 (6-156)||(22605758-22605906)
chr4 (1-127)||(48407491-48407617)
chr4 (6-166)||(5937315-5937475)
chr4 (20-166)||(51833472-51833618)
chr4 (1-166)||(53663029-53663194)
chr4 (1-150)||(56561046-56561194)
chr4 (6-167)||(53403525-53403686)
chr4 (8-164)||(8510686-8510842)
chr4 (38-166)||(30417826-30417954)
chr4 (6-156)||(38768352-38768497)
chr4 (7-138)||(36212790-36212921)
chr4 (36-166)||(28912154-28912281)
chr4 (70-166)||(51677532-51677628)
chr4 (6-81)||(49724390-49724465)
chr4 (20-135)||(29810004-29810118)
chr4 (167-205)||(18140565-18140603)
chr4 (167-205)||(24246731-24246769)
chr4 (167-205)||(31431012-31431050)
chr4 (167-205)||(39382934-39382972)
chr4 (167-205)||(49127778-49127816)
chr4 (167-205)||(24038038-24038076)
chr4 (1-35)||(31430910-31430944)
chr4 (4-46)||(51677644-51677686)
chr4 (21-79)||(52056541-52056599)
chr4 (6-46)||(24035561-24035601)
chr4 (6-46)||(24247243-24247283)
chr4 (6-46)||(31430885-31430925)
chr4 (6-46)||(39382379-39382419)
chr4 (6-46)||(49128354-49128394)
chr4 (36-87)||(29490920-29490971)
chr4 (89-140)||(43781615-43781666)
chr4 (1-48)||(51677627-51677674)
chr4 (89-140)||(51922878-51922929)
chr4 (88-145)||(25312648-25312705)
chr4 (89-142)||(38305947-38306000)
chr4 (89-142)||(41866091-41866144)
chr4 (92-144)||(13167459-13167511)
chr4 (89-141)||(20191782-20191834)
chr4 (1-45)||(31430895-31430939)
[»] scaffold0068 (1 HSPs)
scaffold0068 (6-166)||(38252-38412)
[»] scaffold0097 (1 HSPs)
scaffold0097 (6-156)||(32459-32609)
[»] scaffold0184 (1 HSPs)
scaffold0184 (21-166)||(9187-9332)
[»] scaffold0808 (1 HSPs)
scaffold0808 (1-166)||(4636-4802)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-166)||(92086-92244)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-166)||(301665-301823)
[»] scaffold0069 (1 HSPs)
scaffold0069 (58-166)||(17360-17471)
[»] scaffold0041 (1 HSPs)
scaffold0041 (89-142)||(46714-46767)


Alignment Details
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 44282886 - 44282685
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282886 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 44282787  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||   |||||||||||||||||||||    
T  44282786 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatg 44282690  T
Q  201 gaatt 205  Q
    |||||    
T  44282689 gaatt 44282685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14380818 - 14380649
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14380818 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 14380719  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14380718 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 14380649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31686305 - 31686474
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686305 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 31686404  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686405 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 31686474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 40255221 - 40255052
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40255221 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 40255122  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40255121 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 40255052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 31787361 - 31787192
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31787361 ctgaaagaattgattttggcagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 31787262  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31787261 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 31787192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 7474236 - 7474086
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  7474236 agaattgattctgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaaatgaatgttgtttggatagttt 7474137  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  7474136 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaat 7474086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 17481495 - 17481337
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  17481495 aattgattctgacataattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttt 17481396  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||| ||||||||||||||| ||| ||||| ||||||||||||| ||| |||||    
T  17481395 atcaaaattgcttttgaatgtataagtactaaaatggacatagttaaattcaagtaaat 17481337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13896692 - 13896532
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | |||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||    
T  13896692 ctgatagaattgattctaacagaatttattctgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggat 13896593  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  13896592 agtttt-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 13896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 14037309 - 14037149
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | |||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||    
T  14037309 ctgatagaattgattctaacagaatttattctgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggat 14037210  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  14037209 agtttt-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 14037149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 35457570 - 35457735
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| ||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||| | ||| ||||||||||||    
T  35457570 ctgatagaattgattatgacataattgattttgagagaattgatttatgtttggatacaataatgcagaattgtttaaacaaactgaatgttgtttggat 35457669  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| || |||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  35457670 agtttttattaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 35457735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 43341667 - 43341825
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||||| |||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||||| | | | ||||||||||||||||||     
T  43341667 aattgattctgacataattgattttgagataattgatttatgtttggatacaataatgcagaattgattaaacaaactaaatgttgtttggatagttttt 43341766  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  43341767 atcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 43341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 2442621 - 2442781
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||||   ||||||||||| ||| ||||||||||||||||||||| | ||||   |||||||||||||||||| || |||||||||||||||||    
T  2442621 agaattgatttcatcagaattgattttgagagaattgatttatgtttggatacgataacatagaattgattaaacagaaagaatgttgtttggatagttt 2442720  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||| |||||||||||||||||  ||||| ||||||| |||||| ||||||||    
T  2442721 tgatcaaaattatttttgaatgtataattattaaaatggacatagctaaataaaaataaat 2442781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 43695737 - 43695580
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||| |||||||||||||||||||||  ||||||| ||||||||||||| ||||| | |||||||||||||||||    
T  43695737 agaattgattctgacataattgattttgaaagaattgatttatgtttggatataataatgtagaattgattaaagagaataaatgttgtttggatagttt 43695638  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaata 163  Q
     ||||||||||  |||||||||||||||||| |||||  |||| | ||||||||||||    
T  43695637 cgatcaaaattgtttttgaatgtataattactaaaatgaacattgctaaatacaaata 43695580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 37640155 - 37640302
Alignment:
Q  9 attgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga 108  Q
    ||||||| ||| |||||||||| | | ||||||||||||||||||||| |||||||||| ||||||||||||| |||||  ||||||||||||||||| |    
T  37640155 attgattctgatagaattgattgtaatagaattgatttatgtttggatacaataatgcataattgattaaacaaaatgaacgttgtttggatagttttta 37640254  T
Q  109 tcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    ||||||||  |||||||||||||||||| ||||| ||||||| |||||    
T  37640255 tcaaaattgattttgaatgtataattactaaaatggacatagctaaat 37640302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 16765683 - 16765819
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| | |||||||| ||| ||| ||||||||||||||||| ||| |||||||| ||||||||||||||| | ||| |||| ||||||||||||    
T  16765683 agaattgattctaacagaattaattttgagagaattgatttatgtttagatacaataatgtagaattgattaaacaaactgaatgttatttggatagttt 16765782  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  16765783 tgatcaaaattgcttttgaatgtataattactaaaat 16765819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 32496591 - 32496759
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaat---tgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttg 97  Q
    |||| |||||||||| |||||||||||||| ||| |||||   |||||||||||||||| |||||||||| |||||||||| || | ||| |||||||||    
T  32496591 ctgatagaattgattatgacagaattgattttgagagaataattgatttatgtttggatacaataatgcataattgattaagcaaactgaatgttgtttg 32496690  T
Q  98 gatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
     |||||||| ||| |||||  |||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  32496691 aatagtttttatcgaaattgtttttgaatgtataattactaaaatagacatagctaaattcaagtaaat 32496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 44003354 - 44003192
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | ||| |||||||| ||| |||||||||||| |||||||| |||||||||||||||||||||||| | | |    ||||| |||    
T  44003354 ctgatagaattgattataacataattgattttgagagaattgatttacgtttggatacaataatgcagaattgattaaacaaattaa---atgtttagat 44003258  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||||||||||||| |||||||||||||||||| ||||  ||||||| |||||| ||||||||    
T  44003257 atttttgatcaaaattaattttgaatgtataattactaaaacggacatagctaaatataaataaat 44003192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 19860962 - 19860809
Alignment:
Q  11 tgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatc 110  Q
    ||||||||| | |||||||| ||| |||||||||||| |||||||| |||||||||| ||||||||||||  | | | |||  | |||||| ||||||||    
T  19860962 tgattttgaaataattgattttgagagaattgatttacgtttggatacaataatgcaaaattgattaaacccactaaatgtcatgtggatatttttgatc 19860863  T
Q  111 aaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataa 164  Q
    ||||||  |||| ||||||||||||| ||||||||||||| |||||||||||||    
T  19860862 aaaattgtttttaaatgtataattactaaaatagacatagctaaatacaaataa 19860809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 33597594 - 33597724
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| ||  |||||||||| ||| ||||||||||||||||||||| |||||||  | ||||||||||||| | | |  |||||||||||    
T  33597594 ctgatagaattgattctggtagaattgattttgagagaattgatttatgtttggatacaataatataaaattgattaaacaaactaaaggttgtttggat 33597693  T
Q  101 agttttgatcaaaattacttttgaatgtata 131  Q
    ||||||||||||||||| |||||||||||||    
T  33597694 agttttgatcaaaattatttttgaatgtata 33597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 31047784 - 31047942
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    ||||||||||| || |||||| |   ||| |||| |||||| ||||||| |||||||||| ||||||||||||| |||   ||||||||||||  | ||     
T  31047784 aattgattttgtcataattgagttacacaaaatttatttatatttggatacaataatgcataattgattaaacaaaatagatgttgtttggatgatgttt 31047883  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||| |  |||||||| ||||||||  ||||| |||||| ||||||||||||||||    
T  31047884 atcaaaaatgtttttgaatttataattattaaaatggacataattaaatacaaataaat 31047942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 14379889 - 14379851
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14379889 agaagggttagaaaaattaatgagggcagggatggaatt 14379851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 40254573 - 40254535
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40254573 agaagggttagaaaaattaatgagggcagggatggaatt 40254535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 16467095 - 16467046
Alignment:
Q  93 gtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  16467095 gtttggatagtttagatcaaaattaatttttgatgtataattaccaaaat 16467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 3853913 - 3853861
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||||| |||||    
T  3853913 tgttgtttggatagtttgaatcaaaattgcttttgaatgtgtaattatcaaaa 3853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 31686280 - 31686320
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  31686280 agaattgattctgacagaattgattctgaaagaattgattt 31686320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 31686770 - 31686802
Alignment:
Q  173 gttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||    
T  31686770 gttagaaaaattaatgagggcagggatggaatt 31686802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 31787386 - 31787346
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  31787386 agaattgattctgacagaattgattctgaaagaattgattt 31787346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 40255246 - 40255206
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  40255246 agaattgattctgacagaattgattctgaaagaattgattt 40255206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 44282911 - 44282871
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  44282911 agaattgattctgacagaattgattctgaaagaattgattt 44282871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 13896717 - 13896678
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  13896717 agaattgattctgacagaattgattctgatagaattgatt 13896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 14037334 - 14037295
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  14037334 agaattgattctgacagaattgattctgatagaattgatt 14037295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 3680786 - 3680728
Alignment:
Q  90 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 148  Q
    |||||||||||| |||  ||||||||  |||||||| |||||||||||||| |||||||    
T  3680786 gttgtttggataatttgaatcaaaataccttttgaaagtataattaccaaattagacat 3680728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 40951714 - 40951764
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaa 139  Q
    |||||||||||||||||  |  ||||||| |||||||||||||||||||||    
T  40951714 tgttgtttggatagtttaaagtaaaattatttttgaatgtataattaccaa 40951764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 18511115 - 18511062
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||| |||  |||||||||  ||||||||| ||||||||||||||    
T  18511115 tgttgtttggataatttaaatcaaaattgattttgaatgcataattaccaaaat 18511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 14380843 - 14380803
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||| ||| |||||||||||||||||| |||||||||||    
T  14380843 agaatttattctgacagaattgattctgaaagaattgattt 14380803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 34433286 - 34433326
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  34433286 agaattgattttgatagaattgagtttgacagaattgattt 34433326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 9e-94; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 36495865 - 36496066
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36495865 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 36495964  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||   |||||||||||||||||||||    
T  36495965 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatg 36496061  T
Q  201 gaatt 205  Q
    |||||    
T  36496062 gaatt 36496066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26822048 - 26821879
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26822048 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 26821949  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821948 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 26821879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 38627930 - 38627761
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627930 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 38627831  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627830 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 38627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 50978311 - 50978480
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50978311 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 50978410  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50978411 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 50978480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 51487860 - 51488029
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51487860 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 51487959  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51487960 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 51488029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 5270991 - 5271160
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5270991 ctgaaagaattgattctgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 5271090  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271091 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 5271160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 15353871 - 15353702
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353871 ctgaaagaattgattttggcagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 15353772  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353771 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 15353702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 26999776 - 26999945
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26999776 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttgaat 26999875  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26999876 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 26999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7592691 - 7592859
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7592691 ctgacagaattgattttgacagaattgattctgacagaattgatttatgtttg-atgcaataatgcagaattgattaaacagaatgattgttgtttggat 7592789  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7592790 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaataaaaataaatagaa 7592859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 38844008 - 38843859
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38844008 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgttcggatagttttgatcaaaattactt 38843909  T
Q  121 ttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843908 ttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 38843859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 31099848 - 31100013
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| ||||| |||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||| ||||||| ||||||||||||    
T  31099848 ctgatagaattgattctgacataattgattttgaaagaattgatttatgtttggatacaataatgtagagttgattaaagagaatgaatgttgtttggat 31099947  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
     ||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  31099948 ggttttgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 31100013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 167
Target Start/End: Complemental strand, 6706827 - 6706666
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | | | |||||||||||||||||    
T  6706827 agaattgattctgacagaattgattttgaaagaattgatttatgtttggatacaataatgcagaattgattaaacaaactaaatgttgtttggatagttt 6706728  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaata 167  Q
    | ||||||||| |||||||| |||||||||| ||||| ||||||| ||||| ||| ||||||    
T  6706727 ttatcaaaattgcttttgaacgtataattactaaaatggacatagctaaattcaagtaaata 6706666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 42137088 - 42137249
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||||||  | |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  42137088 agaattgattttgacaaaattgattttgagagaattgatttatgtttgtgtacaataatgcagaattgattaaacagattgaatgttgtttggatagttt 42137187  T
Q  106 tgatcaaaattacttttgaatgtataatta-ccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| ||||||||||||||||||   |||||  |||||| |||||||||||||||    
T  42137188 tgatcaaaattgcttttgaatgtataattattaaaaatgaacatagctaaatacaaataaat 42137249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 16342861 - 16342999
Alignment:
Q  9 attgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga 108  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| |    
T  16342861 attgattttgaaaaaattgattctgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttta 16342960  T
Q  109 tcaaaattacttttgaatgtataattaccaaaatagaca 147  Q
    |||||||| |||||||| |||||||||| ||||| ||||    
T  16342961 tcaaaattgcttttgaacgtataattactaaaatggaca 16342999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 46408164 - 46408024
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 120  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||    
T  46408164 agaattgattctgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgctt 46408066  T
Q  121 ttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||||||||||||| |||||  ||||||||||||| ||||    
T  46408065 ttgaatgtataattactaaaatgaacatagttaaatagaaat 46408024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 41512856 - 41512692
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| |||||||||||||| ||| ||||||||||||||||| ||| ||||| |||||||||||| ||||| | ||| ||||||||||||    
T  41512856 ctgatagaattgattctgacagaattgattttgagagaattgatttatgtttagatacaata-tgcagaattgataaaacaaactgaatgttgtttggat 41512758  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
     |||||||||||||||  ||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  41512757 tgttttgatcaaaattgattttgaatgtataatcactaaaatggacatagctaaatacaaataaat 41512692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 45180031 - 45179870
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||||||||| |||||||| ||| | |||| ||||||||||||||  ||||||| |||||||||||||| |||||| |||||||| || |||||||    
T  45180031 aattgattttgacataattgattttgagataattcatttatgtttggataaaataatgtagaattgattaaacggaatgaatgttgttttgacagttttg 45179932  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 169  Q
    |||||||||  |||| ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  45179931 atcaaaattgtttttaaatgtataattactaaaatggacatagctaaatacaaataaataga 45179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 47655090 - 47655255
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | |||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||| ||    
T  47655090 ctgatagaattgattctcacagaattgatttttagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttgaat 47655189  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | |||| |||||||||  |||||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  47655190 aatttttatcaaaattgtttttgaatgtataattactaaaatggacatagttaaattcaagtaaat 47655255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 50031536 - 50031388
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| ||| ||||||| ||||||||| ||| |||||||||| ||||||||||||| | ||| ||||||||||||||||||     
T  50031536 aattgattctgacagaattgattttgagagaattggtttatgttttgatacaataatgcataattgattaaacatactgaatgttgtttggatagttttt 50031437  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||| |||||    
T  50031436 atcaaaattacttttgaatatataattactaaaatggacatagctaaat 50031388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 11829718 - 11829559
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| || ||||||||||| ||| ||||||||||||||||||||| ||||||   ||||||||||||||| ||||| ||| |||||||||||||    
T  11829718 agaattgattctgtcagaattgattttgaaagaattgatttatgtttggatacaataacatagaattgattaaacaaaatgaatgtcgtttggatagttt 11829619  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaa 165  Q
    ||||||||||| ||||| ||||||||||||| ||||| ||||||  |||||| |||||||    
T  11829618 tgatcaaaattgcttttaaatgtataattactaaaatggacatatctaaataaaaataaa 11829559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 35607011 - 35606868
Alignment:
Q  19 acagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattac 118  Q
    |||||||||||||||  |||| |||||||| ||||||||||||||| |||||||||||||||| ||||||| || |||| |||||||||||||||||| |    
T  35607011 acagaattgattctggaagaaatgatttatatttggatgcaataatacagaattgattaaacataatgatttttatttgaatagttttgatcaaaattgc 35606912  T
Q  119 ttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||||||||||||||| ||||| ||||||| |||||| ||||    
T  35606911 ttttgaatgtataattacgaaaattgacatagctaaatagaaat 35606868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 7385927 - 7385764
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatag--- 102  Q
    |||||||||| |||||||||| ||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||| | ||| ||||||||||||||       
T  7385927 agaattgattctgacagaattaattttgagagaattgatttatttttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 7385828  T
Q  103 ttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||| ||||||||| ||||||||||||||||||| ||||| || |||| ||||| ||| |||||    
T  7385827 tttttatcaaaattgcttttgaatgtataattactaaaatggagatagctaaattcaagtaaat 7385764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 24076172 - 24076060
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||    
T  24076172 agaattgattctgacagaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagttt 24076073  T
Q  106 tgatcaaaattac 118  Q
    |||||||||||||    
T  24076072 tgatcaaaattac 24076060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 46033131 - 46033282
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| |||||||||| ||| |||||||||||||||||| || || ||||||| ||||||||||||| | ||| ||||||||||||||||||     
T  46033131 aattgattctgatagaattgattttgaaagaattgatttatgtttgaataca-taatgcataattgattaaacaaattgaatgttgtttggatagttttt 46033229  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaa 160  Q
    |||||||||  |||||||||||||||||| ||||| ||||||| |||||||||    
T  46033230 atcaaaattgattttgaatgtataattactaaaattgacatagctaaatacaa 46033282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 4484640 - 4484782
Alignment:
Q  24 attgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttg 123  Q
    ||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||| | | ||| |||||||||||||||||| | ||||||| ||||||    
T  4484640 attgattttgatagaattaatttatgtttggatacaataatgcagaattgattaaataaattgaatgttgtttggatagtttttaacaaaattgcttttg 4484739  T
Q  124 aatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||| |||||| |||||| ||||| ||| |||||    
T  4484740 aatgtataattactaaaataaacatagctaaattcaagtaaat 4484782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 1763404 - 1763271
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| | |||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||| | |||||  |||||||| ||||||||||    
T  1763404 aattgattctgataaaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaagcggaatggatgttgtttagatagttttg 1763305  T
Q  108 atcaaaattacttttgaatgtataattaccaaaa 141  Q
    |||||||||  |||||||||||||||||| ||||    
T  1763304 atcaaaattgtttttgaatgtataattactaaaa 1763271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 27576780 - 27576681
Alignment:
Q  67 agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  27576780 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaatttgcttttgaatgtataattactaaaatggacatagctaaataaaaataaat 27576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 50521036 - 50521143
Alignment:
Q  35 cagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatt 134  Q
    |||||||||||||||||||||| |||||| |  ||||| |||||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||    
T  50521036 cagaattgatttatgtttggatacaataacgtggaattaattaaacagaatgaatgttgtttggatagttttgatcaaaattgtttttgaatatataatt 50521135  T
Q  135 accaaaat 142  Q
    || |||||    
T  50521136 actaaaat 50521143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 11050534 - 11050679
Alignment:
Q  22 gaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgttt-ggatagttttgatcaaaattactt 120  Q
    ||||||||| | | |||||| ||||||||| | || |||  ||||||||||||||||||| | | | |||||||| |||||||||||||||||||| |||    
T  11050534 gaattgattttaagagaatttatttatgttagaatacaaggatgcagaattgattaaacaaactaaatgttgttttggatagttttgatcaaaattgctt 11050633  T
Q  121 ttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||||| ||||  |||||||||||||||||| ||||    
T  11050634 ttgaatgtataattactaaaaaggacatagttaaatacaaacaaat 11050679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 44740802 - 44740674
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||| ||| ||| ||||||  ||||| ||||||| |||||||| ||||||||||||||| | ||| ||||||||||||| ||||     
T  44740802 aattgattatgacagaattaattttgagagaattagtttatatttggatacaataatgtagaattgattaaacaaactgaatgttgtttggataattttt 44740703  T
Q  108 atcaaaattacttttgaatgtataattac 136  Q
    |||||||||| |||| |||||||||||||    
T  44740702 atcaaaattatttttaaatgtataattac 44740674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 49431313 - 49431179
Alignment:
Q  20 cagaattgattctgac--agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaatta 117  Q
    ||||||||||||||||  |||||||||||||||||| ||  ||||||||| |||| |||||||| ||| | |||| ||| |||| ||| |||||||||||    
T  49431313 cagaattgattctgactgagaattgatttatgtttgtatataataatgcataatttattaaaca-aataaatgttatttagataatttcgatcaaaatta 49431215  T
Q  118 cttttgaatgtataattaccaaaatagacatagtta 153  Q
    ||||||||| ||||||||| ||||| ||||||||||    
T  49431214 cttttgaatatataattactaaaatggacatagtta 49431179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 27067745 - 27067670
Alignment:
Q  91 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  27067745 ttgtttggattgttttgatcaaaatcacttttgaatctataattactaaaatagacatagttaaatacaaataaat 27067670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 13509409 - 13509487
Alignment:
Q  89 tgttgtttggatagttttg-atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  13509409 tgttgtttggatagttttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 13509487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 5271480 - 5271518
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5271480 agaagggttagaaaaattaatgagggcagggatggaatt 5271518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 7593180 - 7593218
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7593180 agaagggttagaaaaattaatgagggcagggatggaatt 7593218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 27000243 - 27000281
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27000243 agaagggttagaaaaattaatgagggcagggatggaatt 27000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 38843380 - 38843342
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38843380 agaagggttagaaaaattaatgagggcagggatggaatt 38843342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 51488472 - 51488510
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51488472 agaagggttagaaaaattaatgagggcagggatggaatt 51488510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 15884254 - 15884201
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||    
T  15884254 tgttgtttggatagtttggatcaaaattgattttgaatgcataattaccaaaat 15884201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 46581283 - 46581341
Alignment:
Q  90 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 148  Q
    |||||||||||| |||  |||||||||| |||||||||||||||||| ||| |||||||    
T  46581283 gttgtttggataatttgaatcaaaattatttttgaatgtataattacaaaattagacat 46581341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 50979212 - 50979250
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  50979212 agaagggttagaaaaattaatgaggtcagggatggaatt 50979250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 15353896 - 15353856
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  15353896 agaattgattctgacagaattgattctgaaagaattgattt 15353856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 26822073 - 26822033
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  26822073 agaattgattctgacagaattgattctgaaagaattgattt 26822033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 26999751 - 26999791
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  26999751 agaattgattctgacagaattgattctgaaagaattgattt 26999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 36495840 - 36495880
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  36495840 agaattgattctgacagaattgattctgaaagaattgattt 36495880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 38627955 - 38627915
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  38627955 agaattgattctgacagaattgattctgaaagaattgattt 38627915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 50978286 - 50978326
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  50978286 agaattgattctgacagaattgattctgaaagaattgattt 50978326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 51487835 - 51487875
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  51487835 agaattgattctgacagaattgattctgaaagaattgattt 51487875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 5270966 - 5271005
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  5270966 agaattgattctgacagaattgattctgaaagaattgatt 5271005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 27576872 - 27576833
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  27576872 agaattgattctgacagaattgattctgatagaattgatt 27576833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 23628803 - 23628856
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||| | ||||  |||||||||||||||||| ||||||||| ||||||    
T  23628803 tgttgtttgggtggtttgaatcaaaattacttttgaaagtataattatcaaaat 23628856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 27068516 - 27068432
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaa-ttgattaaacagaatgattgtt 92  Q
    |||||||| ||||| |||||||| |||  |||||||||||||||||||| | |||||  |||| ||||||||| ||||||| ||||    
T  27068516 aattgattctgacataattgatt-tgagggaattgatttatgtttggatacgataatatagaatttgattaaatagaatgaatgtt 27068432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 41512879 - 41512842
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  41512879 aattgactttgacagaattgattctgatagaattgatt 41512842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 41956 - 41904
Alignment:
Q  90 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||| || ||||||||||  |||||| || ||||||||||||||    
T  41956 gttgtttggatagcttggatcaaaatttattttgagtgcataattaccaaaat 41904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 20800260 - 20800300
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  20800260 agaattgattttgatagaattgattttgagagaattgattt 20800300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 35569185 - 35569225
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  35569185 agaattgattttgatagaattgattttgagagaattgattt 35569225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 35569300 - 35569344
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 133  Q
    |||||||||||||||||  |||||||||  |||||||||||||||    
T  35569300 tgttgtttggatagtttgaatcaaaattgattttgaatgtataat 35569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 3e-93; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 47697403 - 47697190
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697403 ctgaaagaattgattttggcagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 47697304  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatag--------aagggt-tagaaaaattaatgagg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||    
T  47697303 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaaattactaagggtgtagaaaaattaatgagg 47697204  T
Q  192 gcagggatggaatt 205  Q
    ||||||||||||||    
T  47697203 gcagggatggaatt 47697190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 1528219 - 1528050
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1528219 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 1528120  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1528119 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 1528050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 47140735 - 47140904
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47140735 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 47140834  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47140835 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 47140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 38469894 - 38469725
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38469894 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 38469795  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38469794 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaataaaaataaatagaa 38469725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 51124755 - 51124924
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51124755 ctgaaagaattgattctgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 51124854  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51124855 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 51124924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 52693253 - 52693084
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52693253 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatacagaattgattaaacagaatgattgttgtttggat 52693154  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52693153 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 52693084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 30811409 - 30811251
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||| | ||| |||||||||||||||||||    
T  30811409 aattgattctgacagaattgattttgagagaattgatttatgtttggatacaataattcagaattgattaaacaaactgaatgttgtttggatagttttg 30811310  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||  |||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  30811309 atcaaaattgattttgaatgtataattactaaaatggacatagctaaatacaaataaat 30811251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 28884381 - 28884218
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| | | |||||| |||||||||||||| |||||||| | ||||||||||| ||||||| |||||||||||||||||    
T  28884381 agaattgattctgacataattgattttaaaagaattaatttatgtttggatacaataatgtataattgattaaagagaatgaatgttgtttggatagttt 28884282  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 169  Q
    | |||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  28884281 taatcaaaattatttttgaatgtataattactgaaatggacatagttaaatacaaataaataga 28884218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 33025181 - 33025339
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  33025181 aattgattctgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttt 33025280  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||  |||||||| ||||||||| ||||||||||||| ||||| ||| |||||    
T  33025281 atcaaaattgtttttgaatctataattactaaaatagacatagctaaattcaagtaaat 33025339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 48253892 - 48254052
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||| ||| |||||||||| ||||||||||||| | ||| |||||||||||||||||    
T  48253892 agaattgattctgacagaattgattttgagagaattgatttatgtttagatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagttt 48253991  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  48253992 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 48254052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11264405 - 11264250
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||    
T  11264405 ctgatagaattgattgtgacagaattgattttgagagaattaatttatgtttggatacaaaaatgcagaattgattaaacaaaatgaatgttgtttggat 11264306  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    |||||| ||||||||| ||||||||||||||||||| |||||  |||||| |||||    
T  11264305 agtttttatcaaaattgcttttgaatgtataattactaaaatgaacatagctaaat 11264250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 33329372 - 33329515
Alignment:
Q  23 aattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 122  Q
    |||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||  ||||||||||||||||| |||||||||| |||||    
T  33329372 aattgattttgacataattgatttatgtttggatacaataatgtagaattgattaaacaaaatggatgttgtttggatagtttcgatcaaaattgctttt 33329471  T
Q  123 gaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||    
T  33329472 gaatgtataattactaaaatggacatagctaaatacaaataaat 33329515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 48181766 - 48181608
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| |||||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  48181766 aattgattctgatagaattgattttgagataattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttt 48181667  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||| |||||||||| |||| ||||||| ||||| ||| |||||    
T  48181666 atcaaaattacttttgaatatataattaccgaaatggacatagctaaattcaagtaaat 48181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 42075037 - 42074877
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||| |||| ||||||||||||| | ||| ||||||||||||||||     
T  42075037 agaattgattctgacagaattgattttgagagaattgatttatgtttggatacaatagtgcataattgattaaacaaactgaatgttgtttggatagttc 42074938  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | |||||||||  |||||||||||||||||| |||||||| |||||||||| ||| |||||    
T  42074937 ttatcaaaattgattttgaatgtataattactaaaatagagatagttaaattcaagtaaat 42074877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 39252182 - 39252024
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| |||||||||| |||   ||||||||||| ||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  39252182 aattgattctgatagaattgattttgagttaattgatttatatttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttt 39252083  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  39252082 atcaaaattgcttttgaatgtataattactaaaatggacatagttaaattcaagtaaat 39252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 50392218 - 50392376
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||| ||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| | ||||||||||| |||||    
T  50392218 aattaattctgacagaattgattttgatagaattgatttatgtttggatacaataatgtagaattgattaaacaaattgaatattgtttggataattttg 50392317  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||  |||||||||||||||||| || || ||||||| |||||||||||||||    
T  50392318 atcaaaattgattttgaatgtataattactaatatggacatagctaaatacaaataaat 50392376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 51230411 - 51230247
Alignment:
Q  2 tgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggata 101  Q
    ||||||||||||||  || |||||||||||||| |||||||||||||||||| || |||||||||| ||||||||||||| | ||| |||||||||||||    
T  51230411 tgaaagaattgattccgagagaattgattctgagagaattgatttatgtttgaatacaataatgcaaaattgattaaacaaactgaatgttgtttggata 51230312  T
Q  102 gttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||| |||||| ||  |||||||||||||||||| |||||| |||||| ||||| ||| |||||    
T  51230311 gtttttatcaaatttgattttgaatgtataattactaaaataaacatagctaaattcaagtaaat 51230247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 39267073 - 39267216
Alignment:
Q  23 aattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 122  Q
    |||||||| ||| ||||||||||||||||||||| ||||| || | ||||||||||||| | | | |||||||| ||||||||||||||||| | |||||    
T  39267073 aattgattttgagagaattgatttatgtttggatacaatagtgtataattgattaaacaaactaaatgttgttttgatagttttgatcaaaactgctttt 39267172  T
Q  123 gaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||    
T  39267173 gaatgtataattactaaaatggacatagctaaatacaaataaat 39267216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 168
Target Start/End: Original strand, 45488498 - 45488660
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||||||| |||||||||| ||| | |||||||||| |||||||| |||||||||| ||||||||||||  | | | |||  | |||||| |||    
T  45488498 agaattgattttgaaagaattgattttgagataattgatttacgtttggatacaataatgcaaaattgattaaacccactaaatgtcatgtggatatttt 45488597  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatag 168  Q
    |||||||||||  |||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  45488598 tgatcaaaattgtttttgaatgtataagtactaaaatagacatagctaaatacaaataaatag 45488660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 44329308 - 44329195
Alignment:
Q  36 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 135  Q
    |||||||||||||||||| || | |||||| | ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44329308 agaattgatttatgtttgtatacgataatgtaaaattgattaaatagaatgaatgttgtttggatagttttgatcaaaattacttttgaatgtataatta 44329209  T
Q  136 ccaaaatagacata 149  Q
    | ||||| ||||||    
T  44329208 ctaaaattgacata 44329195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 45151315 - 45151168
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||  ||||||||||||||||||||| |||||||| ||||||||||||||| ||| | |||||||||||||||||    
T  45151315 agaattgattgtgacaaaattgattttgggagaattgatttatgtttggatacaataatgtagaattgattaaacaaaataaatgttgtttggatagttt 45151216  T
Q  106 tg----atcaaaattacttttgaatgtataattaccaaaatagacata 149  Q
    |     ||||||||| ||||||||||||||||||| ||||| ||||||    
T  45151215 ttttttatcaaaattgcttttgaatgtataattactaaaatggacata 45151168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 42275235 - 42275090
Alignment:
Q  10 ttgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg-- 107  Q
    |||||| ||||| |||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||       
T  42275235 ttgattatgacataattgattttgagagaattggtttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttttt 42275136  T
Q  108 ---atcaaaattacttttgaatgtataattaccaaaatagacatag 150  Q
       ||||||||| ||||||||||||||||||| ||||| |||||||    
T  42275135 tttatcaaaattgcttttgaatgtataattactaaaatggacatag 42275090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 40237942 - 40237799
Alignment:
Q  23 aattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 122  Q
    |||||||| ||| |||||||||||||||||| || |||||| | ||||||||||||  || |||| ||||||||| |||||||| ||||||||| |||||    
T  40237942 aattgattttgagagaattgatttatgtttgaatacaataacgtagaattgattaattaggatgaatgttgtttgaatagtttttatcaaaattgctttt 40237843  T
Q  123 gaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||  ||||| ||||||| |||||| ||||||||    
T  40237842 gaatgtataattattaaaatggacatagctaaataaaaataaat 40237799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 41536478 - 41536321
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||| | ||||||||| ||||| ||| |||||||| ||||||||||||||  | | | |||||||||||| ||||    
T  41536478 agaattgattatgacataattgattttgagataattgatttttgtttagatacaataatgtagaattgattaaacgaactaaatgttgtttggatggttt 41536379  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaata 163  Q
    |||||||||||  |||||||| ||||||||| ||||| ||||||  ||||||||||||    
T  41536378 tgatcaaaattgtttttgaatatataattactaaaattgacataactaaatacaaata 41536321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 44610267 - 44610385
Alignment:
Q  43 atttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||| |||||||| | |||||||||||| |||||  |||||||||||||| |||||||||||||  |||||||||||||||||| |||||    
T  44610267 atttatgtttggatacaataatgtaaaattgattaaacggaatggatgttgtttggatag-tttgatcaaaattgattttgaatgtataattactaaaat 44610365  T
Q  143 agacatagttaaatacaaat 162  Q
     ||||||| |||||||||||    
T  44610366 ggacatagctaaatacaaat 44610385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 5104700 - 5104822
Alignment:
Q  7 gaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 106  Q
    |||||||||||| || |||||| | |   |||||||||||||||||||||  ||||||| ||| ||||||||||| ||||| ||||||||| ||| ||||    
T  5104700 gaattgattttgtcacaattgagtttagtagaattgatttatgtttggatataataatgtagatttgattaaacaaaatgaatgttgtttgaataatttt 5104799  T
Q  107 gatcaaaattacttttgaatgta 129  Q
    |||||||||||||||||||||||    
T  5104800 gatcaaaattacttttgaatgta 5104822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 53686564 - 53686640
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaa 165  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| ||||    
T  53686564 tgttgtttggatagtttttatcaaaattacttttgaatatataattactaaaatagacatagctaaattcaagtaaa 53686640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 40244138 - 40244040
Alignment:
Q  69 aattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaata 167  Q
    ||||||||||| | ||| | | |||||||||||||||| |||||||||  |||| ||||||||||||||||||| ||||| |||||||||| |||||||    
T  40244138 aattgattaaatataataaatattgtttggatagttttaatcaaaattgtttttaaatgtataattaccaaaatggacatggttaaatacatataaata 40244040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 38469297 - 38469259
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38469297 agaagggttagaaaaattaatgagggcagggatggaatt 38469259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 47141378 - 47141416
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47141378 agaagggttagaaaaattaatgagggcagggatggaatt 47141416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 51128991 - 51129029
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51128991 agaagggttagaaaaattaatgagggcagggatggaatt 51129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 52692156 - 52692118
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52692156 agaagggttagaaaaattaatgagggcagggatggaatt 52692118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 52764750 - 52764662
Alignment:
Q  42 gatttatgtttggatgcaataatgcaga---attgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatg 127  Q
    |||||||||||||||||||||||  | |   ||||||||||||||| || ||||||||| ||| |||||||||||||| |||| |||||    
T  52764750 gatttatgtttggatgcaataatatatacttattgattaaacagaacgaatgttgtttgaataattttgatcaaaattgctttagaatg 52764662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 1527760 - 1527722
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1527760 agaagggttagaaaaattaatgagggcaggaatggaatt 1527722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 1528244 - 1528204
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  1528244 agaattgattctgacagaattgattctgaaagaattgattt 1528204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 31618984 - 31619028
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 133  Q
    |||||||||||||||||  |||||||||| |||||||||||||||    
T  31618984 tgttgtttggatagtttgaatcaaaattaattttgaatgtataat 31619028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 38469919 - 38469879
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  38469919 agaattgattctgacagaattgattctgaaagaattgattt 38469879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 47140710 - 47140750
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  47140710 agaattgattctgacagaattgattctgaaagaattgattt 47140750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 47697428 - 47697388
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  47697428 agaattgattctgacagaattgattctgaaagaattgattt 47697388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 52693278 - 52693238
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  52693278 agaattgattctgacagaattgattctgaaagaattgattt 52693238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 51124730 - 51124769
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  51124730 agaattgattctgacagaattgattctgaaagaattgatt 51124769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 14651199 - 14651257
Alignment:
Q  90 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 148  Q
    |||||||||||| |||  ||||||||  |||||||| |||||||||||||| |||||||    
T  14651199 gttgtttggataatttgaatcaaaatagcttttgaaagtataattaccaaattagacat 14651257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 37698486 - 37698539
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||||||  |||||||||  ||||  ||||||||||||||||||    
T  37698486 tgttgtttggatagtttgaatcaaaattgattttacatgtataattaccaaaat 37698539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 42475714 - 42475657
Alignment:
Q  88 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 145  Q
    ||||||||||||||  ||  ||||||||| |||||  |||||||||||||||||||||    
T  42475714 ttgttgtttggatacattgaatcaaaattgcttttagatgtataattaccaaaataga 42475657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 23496328 - 23496284
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 133  Q
    |||||||||||||||||  |||||||||  |||||||||||||||    
T  23496328 tgttgtttggatagtttgaatcaaaattgattttgaatgtataat 23496284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 31813929 - 31813893
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattg 42  Q
    ||||||||||||||||||||||||||||  |||||||    
T  31813929 agaattgattttgacagaattgattctgggagaattg 31813893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 194097 - 193928
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  194097 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 193998  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193997 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 193928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 30211295 - 30211126
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30211295 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 30211196  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30211195 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 30211126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 34773814 - 34773983
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34773814 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 34773913  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34773914 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 34773983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30982595 - 30982764
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30982595 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattaattaaacagaatgattgttgtttggat 30982694  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30982695 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 30982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 629425 - 629256
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  629425 ctgaaagaattgattatgacagaattgattctgacagaattgatttatgtttgaatgcaataatgcagaattgattaaacagaatgattgttgtttggat 629326  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  629325 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 629256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 721668 - 721532
Alignment:
Q  34 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  721668 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 721569  T
Q  134 taccaaaatagacatagttaaatacaaataaatagaa 170  Q
    |||||||||||||||||||||||||||||||||||||    
T  721568 taccaaaatagacatagttaaatacaaataaatagaa 721532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 882775 - 882639
Alignment:
Q  34 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  882775 acagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataat 882676  T
Q  134 taccaaaatagacatagttaaatacaaataaatagaa 170  Q
    |||||||||||||||||||||||||||||||||||||    
T  882675 taccaaaatagacatagttaaatacaaataaatagaa 882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 924733 - 924573
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    ||||||||||||||| ||| ||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||| | ||| | |||||| ||||||||    
T  924733 agaattgattttgaccgaaatgattttgagataattgatttatgtttggatgcaataatgcataattgattaaacaaactgaatattgtttagatagttt 924634  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  924633 tgatcaaaattacttttgaatgtataattactaaaatggacatagttaaatacaagtaaat 924573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 35801708 - 35801856
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||     
T  35801708 aattgattatgatagaattgattgtgacagaattgatttatgtttgaatacaataatgcagaattgattaaacaaaatgaatgttgtttggatagttttt 35801807  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    |||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  35801808 atcaaaattgtttttgaatgtataattactaaaatggacatagttaaat 35801856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 26575930 - 26575770
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||| |||||||||| ||| ||||||||||||||||||||| |||||||  ||||||||||| | |||| |  |||||||||||||||||    
T  26575930 agaattgattctgatagaattgattttgagagaattgatttatgtttggatacaataatatagaattgattagatagaagggatgttgtttggatagttt 26575831  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  26575830 tgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 26575770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 44240811 - 44240658
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  44240811 aattgattctgatagaattgattctgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt- 44240713  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||||||  |||||||||||||||||| ||||| ||||||| |||||| ||||    
T  44240712 atcaaaattgtttttgaatgtataattactaaaatggacatagctaaataaaaat 44240658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 45275787 - 45275952
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||| |||||| ||||||||||||| | ||| |||| |||||||    
T  45275787 ctgatagaattgattctgacagaattgattttgagagaattgatttatgtttggatacaacaatgcaaaattgattaaacaaactgaatgttatttggat 45275886  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  45275887 agtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 45275952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 2026214 - 2026056
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||| |||||||||| ||| ||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  2026214 aattgattctgaaagaattgattttgagagaattgatttatgttttgatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttta 2026115  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |  ||||||  |||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  2026114 aaaaaaattgattttgaatgtataattactaaaatggacatagctaaatacaaataaat 2026056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 8417362 - 8417202
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||| ||| ||||| |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||| | ||| |||||||| ||||||||    
T  8417362 agaattaattctgacataattgattttgagagaattgatttatgtttggatataataatgcagaattgattaaacaaattgaatgttgtttagatagttt 8417263  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | |||||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| |||||    
T  8417262 taatcaaaattacttttgaatgtagaattactaaaatggacatagctaaattcaagtaaat 8417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 13016316 - 13016219
Alignment:
Q  69 aattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  13016316 aattgattaaacagaatgaatgttgttttaatagttttgatcaaaattacttttgaatgtataattactaaaatggacatagttaaatacaaataaat 13016219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 17073628 - 17073754
Alignment:
Q  9 attgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga 108  Q
    ||||||| ||| |||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| |   | |||||||||||||||||| |    
T  17073628 attgattctgatagaattgattttgaaagaattggtttatgtttggatacaataatgcagaattgattaaacaaacataatgttgtttggatagttttta 17073727  T
Q  109 tcaaaattacttttgaatgtataatta 135  Q
    ||||||||  |||||||||||||||||    
T  17073728 tcaaaattgtttttgaatgtataatta 17073754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 17574642 - 17574516
Alignment:
Q  9 attgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttga 108  Q
    ||||||| ||| |||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| |   | |||||||||||||||||| |    
T  17574642 attgattctgatagaattgattttgaaagaattggtttatgtttggatacaataatgcagaattgattaaacaaacataatgttgtttggatagttttta 17574543  T
Q  109 tcaaaattacttttgaatgtataatta 135  Q
    ||||||||  |||||||||||||||||    
T  17574542 tcaaaattgtttttgaatgtataatta 17574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 23018253 - 23018418
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | | |||||||||| | | | |||||||||| |||||||| |||||||| | ||||||||||||| | ||| ||||||||| ||    
T  23018253 ctgatagaattgattctaatagaattgattgtaagataattgatttacgtttggatacaataatgtaaaattgattaaacacattgagtgttgtttgaat 23018352  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||  |||||||||||||||||| ||||  ||||||  |||||||| ||||||    
T  23018353 agttttgatcaaaattgtttttgaatgtataattactaaaaccgacataactaaatacatataaat 23018418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 166
Target Start/End: Original strand, 36821050 - 36821176
Alignment:
Q  38 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 137  Q
    ||||||||||||||||||| |||||||||||||||||| |  || | ||| |||||||||||||||||| ||| ||||| |||||||||||||||||||     
T  36821050 aattgatttatgtttggatacaataatgcagaattgatga--caaactgaatgttgtttggatagttttcatcgaaattgcttttgaatgtataattact 36821147  T
Q  138 aaaatagacatagttaaatacaaataaat 166  Q
    ||||| ||||||  ||||| ||| |||||    
T  36821148 aaaatggacataactaaattcaagtaaat 36821176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 11071179 - 11071082
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagt 103  Q
    |||||||||| ||| | |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||| | | ||| |||||||||||||||    
T  11071179 agaattgattctgatataattgattttgatagaattgatttatgtttggatacaataatacagaattgattaaataaattgaatgttgtttggatagt 11071082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 2598584 - 2598506
Alignment:
Q  58 caataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattac 136  Q
    ||||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||  |||||||||    
T  2598584 caataatgctgaattgattaaacaaaatgaacgttgttttgatagttttgatcaaaattacttttgaaaatataattac 2598506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 189862 - 189824
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  189862 agaagggttagaaaaattaatgagggcagggatggaatt 189824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 717466 - 717428
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  717466 agaagggttagaaaaattaatgagggcagggatggaatt 717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 878573 - 878535
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  878573 agaagggttagaaaaattaatgagggcagggatggaatt 878535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 30984278 - 30984316
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30984278 agaagggttagaaaaattaatgagggcagggatggaatt 30984316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 34774324 - 34774362
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34774324 agaagggttagaaaaattaatgagggcagggatggaatt 34774362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 30210623 - 30210585
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30210623 agaagggttagaaaaattaatgaggacagggatggaatt 30210585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 3619165 - 3619218
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||||||  |||||||||  |||| |||||||||||||||||||    
T  3619165 tgttgtttggatagtttgaatcaaaattgattttaaatgtataattaccaaaat 3619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 194122 - 194082
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  194122 agaattgattctgacagaattgattctgaaagaattgattt 194082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 308934 - 308902
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctg 33  Q
    |||||||||||||||||||||||||||||||||    
T  308934 ctgaaagaattgattttgacagaattgattctg 308902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 308959 - 308919
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  308959 agaattgattctgacagaattgattctgaaagaattgattt 308919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 30211320 - 30211280
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  30211320 agaattgattctgacagaattgattctgaaagaattgattt 30211280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 30982570 - 30982610
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  30982570 agaattgattctgacagaattgattctgaaagaattgattt 30982610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 34773789 - 34773829
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  34773789 agaattgattctgacagaattgattctgaaagaattgattt 34773829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 629450 - 629411
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  629450 agaattgattctgacagaattgattctgaaagaattgatt 629411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 2071665 - 2071723
Alignment:
Q  90 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacat 148  Q
    |||||||||||| |||  ||||||||  |||||||| |||||||||||||| |||||||    
T  2071665 gttgtttggataatttgaatcaaaatagcttttgaaagtataattaccaaattagacat 2071723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 35615722 - 35615668
Alignment:
Q  88 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||||||| | ||||||||  ||||||||| |||||||| |||||    
T  35615722 ttgttgtttggatagtttggctcaaaattgattttgaatgcataattacgaaaat 35615668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 32606549 - 32606602
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||||||| ||| |||||| |||||| || | |||||||||||||    
T  32606549 tgttgtttggatagtttggatgaaaattgcttttgcatatctaattaccaaaat 32606602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36820933 - 36820978
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||||    
T  36820933 ctgacagaattgattctgatagaactgattctgacagaattgattt 36820978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 41289155 - 41289208
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||||||  |||||||||  ||||||||| | ||||||||||||    
T  41289155 tgttgtttggatagtttgaatcaaaattgattttgaatgcaaaattaccaaaat 41289208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 308949 - 308905
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||| |||||||||| ||| |||||||||| ||||||||||||||    
T  308949 ctgacagaattgattctgaaagaattgattttgacagaattgatt 308905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 15206708 - 15206656
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    ||||||||||||||||| |  |||||||  ||||||||| |||||||||||||    
T  15206708 tgttgtttggatagtttggcccaaaattgattttgaatgcataattaccaaaa 15206656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 24297688 - 24297740
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    |||||||||||||||||  |||||||||  ||||  |||||||||||||||||    
T  24297688 tgttgtttggatagtttgaatcaaaattgattttacatgtataattaccaaaa 24297740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 37458403 - 37458447
Alignment:
Q  92 tgtttggatagttttgatcaaaattacttttgaatgtataattac 136  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||    
T  37458403 tgtttggatagtttgaatcaaaattgattttgaatgtataattac 37458447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 41289040 - 41289080
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    ||||||||||||||||||||||| | ||| |||||||||||    
T  41289040 agaattgattttgacagaattgagtttgagagaattgattt 41289080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31011981 - 31012150
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31011981 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 31012080  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012081 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 31012150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 25340962 - 25341131
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25340962 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 25341061  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25341062 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataactagaa 25341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 25191249 - 25191414
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||| | |||||||| ||| |||| | |||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||    
T  25191249 ctgaaagaattgattttgatataattgattttgagagaacttatttatgtttggatacaataatgtagaattgattaaacaaaatgaatgttgtttggat 25191348  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||||| ||||| ||||||||||||| |||||  |||||| |||||||||||||||    
T  25191349 agttttgatcaaaattgcttttaaatgtataattactaaaatgcacatagctaaatacaaataaat 25191414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 12910615 - 12910462
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | ||| ||||||||||||||||||     
T  12910615 aattgattctgacagaattgattctgagagaattgatttatgtttggatataataatgcagaattgattaaacaaactgaatgttgtttggatagtttt- 12910517  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  12910516 atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 12910462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 298062 - 298221
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| | | ||||||||||||||||||||| ||| ||||  |||||||||||||||||||  |||||||| ||||||||    
T  298062 agaattgattctgacagaattgatttt-agagaattgatttatgtttggatacaaaaatgtggaattgattaaacagaatggatgttgtttagatagttt 298160  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  298161 tgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 298221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 26827075 - 26826915
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||    
T  26827075 agaattgattctgacaaaattgattttgagagaattggtttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 26826976  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  26826975 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 26826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 4036042 - 4035882
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| | ||  |||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | | | |||||||||||||||||    
T  4036042 agaattgattctaacgtaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactaaatgttgtttggatagttt 4035943  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  4035942 taatcaaaattgcttttgaatgtataattactaaaatagacatagctaaatataaataaat 4035882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 25472165 - 25472301
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||    
T  25472165 agaattgattttgacagaattgattttgagagaattgatttatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggatagttt 25472264  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    | ||||||||| ||||||||| ||||||||| |||||    
T  25472265 ttatcaaaattgcttttgaatatataattactaaaat 25472301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32451464 - 32451295
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattct-gacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttgga 99  Q
    |||| |||||||||| | ||| |||||||| | || ||||||||||||||||| ||| |||||||| | ||||||||||||| ||||| ||||||||  |    
T  32451464 ctgatagaattgattataacataattgatttttgagagaattgatttatgtttcgatacaataatgtaaaattgattaaacataatgaatgttgtttaaa 32451365  T
Q  100 tagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 169  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  32451364 tagttttgatcaaaattgcttttgaatgtataattactaaaatggacatggttaaatacaaataaataga 32451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 15000576 - 15000416
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| | |||||||||||||||| ||  ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  15000576 agaattgattctgacagaattgattttgagataattgatttatgtttgaataaaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 15000477  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | | ||||||| ||||||||||||||||||| ||| ||||||||| ||||| ||| |||||    
T  15000476 ttaacaaaattgcttttgaatgtataattactaaactagacatagctaaattcaagtaaat 15000416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 47085236 - 47085380
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||||| |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||| ||| ||   ||||||||||||||||||    
T  47085236 aattgattatgacataattgattttgagagaattgatttatgtttggatacaataatgcaaaattgattaaatagagtggaggttgtttggatagttttg 47085335  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagtt 152  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||    
T  47085336 atcaaaattgcttttgaatgtataattactaaaatggacatagtt 47085380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 1999615 - 1999778
Alignment:
Q  3 gaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatag 102  Q
    |||| |||||||| ||||| |||||||||| | |||||||||||||||||  |  |||||||| ||||||||||||| ||||| | ||||||||| ||||    
T  1999615 gaaataattgattctgacataattgattcttatagaattgatttatgtttaaacacaataatgtagaattgattaaatagaataaatgttgtttgaatag 1999714  T
Q  103 ttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| || ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  1999715 ttttgatcaaacttgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 1999778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 43664242 - 43664400
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||||||| | |||||||| ||||| |||| |||||||||||||| |||||||||||||||| ||||||| | ||| | || |||||||||||||     
T  43664242 aattgattttgataaaattgattatgacataattaatttatgtttggatacaataatgcagaattgtttaaacaaactgaatattatttggatagttttt 43664341  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  43664342 atcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 43664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 26827158 - 26827306
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||||| |||||||| ||| |||||| |||||||||||||| ||||| |||||||||||||||||| | |||  |||||||||||||||||     
T  26827158 aattgattatgacataattgattttgagagaatttatttatgtttggatacaatattgcagaattgattaaacaaattgaaagttgtttggatagttttt 26827257  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||| |||||    
T  26827258 atcaaaattgcttttgaatgtacaattactaaaatggacatagctaaat 26827306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 41065449 - 41065305
Alignment:
Q  20 cagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattact 119  Q
    ||||||||||| | | | |||||||||||||||| || | |||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  41065449 cagaattgattttaagataattgatttatgtttgaatacgataacgtagaattgattaaagagaatgaatgttgtttggatagttttgatcaaaattgct 41065350  T
Q  120 tttgaatgtataattaccaaaatagacatagttaaatacaaataa 164  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  41065349 tttgaatgtataattactaaaatggacatagctaaataaaaataa 41065305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 39857644 - 39857517
Alignment:
Q  38 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 137  Q
    ||||||||||||||||||| |||||| | ||||| ||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||     
T  39857644 aattgatttatgtttggatacaataacgtagaatcgattaaacaaaatgaatgtcgtttggatagttttgatcaaaattgcttttgaatgtataattact 39857545  T
Q  138 aaaatagacatagttaaatacaaataaa 165  Q
    ||||| ||||||| |||||| |||||||    
T  39857544 aaaatggacatagctaaataaaaataaa 39857517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 40233983 - 40233849
Alignment:
Q  23 aattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 122  Q
    |||||||| ||| ||||||||||||||||| ||| |||||| | | |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  40233983 aattgattttgagagaattgatttatgtttagatacaataacgtataattgattaaacggaatgaatgttgtttggatagttttgatcaaaattattttt 40233884  T
Q  123 gaatgtataattaccaaaatagacatagttaaata 157  Q
    |||||||| |||||  |||| ||||||||||||||    
T  40233883 gaatgtatgattacttaaatggacatagttaaata 40233849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 30139217 - 30139382
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| |||||||||||||| | | | ||||||||||||||||||| ||||||| || ||||||||||||| | ||| ||| ||| ||||    
T  30139217 ctgatagaattgattctgacagaattgattttcagataattgatttatgtttggatacaataattcataattgattaaacaaactgaatgtcgttcggat 30139316  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| |||||||||  |||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  30139317 agtttttatcaaaattgattttgaatgtataattactaaaatggacatagctaaattcaagtaaat 30139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 39957900 - 39958059
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |  |||||||| || ||||||| ||||||||||||||||| |||||||| ||||||||||||||| | | | ||| |||||||||||||    
T  39957900 agaattgattcttgcagaattgttt-tgacagagttgatttatgtttggatacaataatgtagaattgattaaacaaactaaatgtcgtttggatagttt 39957998  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||  |||||||||||||||||| |||||  |||||| |||||| ||||||||    
T  39957999 tgatcaaaattgtttttgaatgtataattactaaaattaacatagctaaataaaaataaat 39958059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 37371367 - 37371257
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||| ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||    
T  37371367 agaattgattctgacggaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaagtgaatgttgtttggatagttt 37371268  T
Q  106 tgatcaaaatt 116  Q
    | |||||||||    
T  37371267 ttatcaaaatt 37371257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 30825856 - 30825715
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| ||||| |||| ||| | | |||| |||||| ||||||||| ||||||||||||||||||||||||   ||| |||| |||||||| ||||     
T  30825856 aattgattctgacaaaattaattttaagagaaatgatttctgtttggatacaataatgcagaattgattaaacaatctgaatgttatttggataattttt 30825757  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatag 150  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||    
T  30825756 atcaaaattgcttttgaatgtataa-tactaaaatagacatag 30825715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 11342052 - 11341955
Alignment:
Q  69 aattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||| | || ||||| || |||||||||  ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  11342052 aattgatttagcataatgaatgatgtttggatgattttgatcaaaattgtttttgaatgtataattactaaaatagacatagttaaatacaaataaat 11341955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 45203207 - 45203101
Alignment:
Q  10 ttgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgat 109  Q
    |||||| |||||| ||| ||| | | || |||||||||||||| ||| |||||||||||||||||||||||  | ||| |||||||||||||||||||||    
T  45203207 ttgattatgacaggattaattttaagaggattgatttatgtttagatacaataatgcagaattgattaaaccaattgaatgttgtttggatagttttgat 45203108  T
Q  110 caaaatt 116  Q
    |||||||    
T  45203107 caaaatt 45203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 26169336 - 26169459
Alignment:
Q  23 aattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 122  Q
    ||||||||  || ||||||||||||||||||||  | |||||| |  |||||||||||| ||||   | |||||| |||||||||||||||||| |||||    
T  26169336 aattgatttagagagaattgatttatgtttggagacgataatgtatgattgattaaacataatg---gatgtttgaatagttttgatcaaaattgctttt 26169432  T
Q  123 gaatgtataattaccaaaatagacata 149  Q
    |||||||||||||| ||||| ||||||    
T  26169433 gaatgtataattactaaaatggacata 26169459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 31012379 - 31012417
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31012379 agaagggttagaaaaattaatgagggcagggatggaatt 31012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 25341421 - 25341459
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  25341421 agaagggttagaaaaattaatgagggcaggaatggaatt 25341459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 41625599 - 41625649
Alignment:
Q  91 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||||||||    
T  41625599 ttgtttggatagttgagatcaaaattgcttttgaaggtataattaccaaaa 41625649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 47157666 - 47157712
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgttt 52  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  47157666 agaattgattctgagagaattgattctgacggaattgatttatgttt 47157712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 31011956 - 31011996
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  31011956 agaattgattctgacagaattgattctgaaagaattgattt 31011996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 2839314 - 2839263
Alignment:
Q  91 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||| |||   ||||||||| ||||||||||||||||||||||||    
T  2839314 ttgtttggatactttgagtcaaaattatttttgaatgtataattaccaaaat 2839263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 20388767 - 20388826
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgca 67  Q
    |||||||| |||||||||||||| | | | |||||||||| |||||||| ||||||||||    
T  20388767 aattgattatgacagaattgattttaagataattgatttacgtttggatacaataatgca 20388826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 39634248 - 39634302
Alignment:
Q  88 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||||  || ||||||||||  ||||||||| ||||||||||||||    
T  39634248 ttgttgtttggataacttggatcaaaattgattttgaatgcataattaccaaaat 39634302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 40903251 - 40903304
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||||||   |||||||||  ||||| ||||||||||||||||||    
T  40903251 tgttgtttggatagttcaaatcaaaattgattttggatgtataattaccaaaat 40903304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 25340937 - 25340977
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||| ||| |||||||||||||||||| |||||||||||    
T  25340937 agaattaattctgacagaattgattctgaaagaattgattt 25340977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 40725927 - 40725867
Alignment:
Q  92 tgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagtt 152  Q
    |||||||||  ||||||||||||||  |||||||||||||||||  |||||  ||||||||    
T  40725927 tgtttggattattttgatcaaaattgtttttgaatgtataattattaaaatgtacatagtt 40725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 30019931 - 30019762
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30019931 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 30019832  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30019831 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 30019762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 21515110 - 21515250
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 120  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||    
T  21515110 agaattgattctgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttt-atcaaaattgctt 21515208  T
Q  121 ttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||||||||||||| || || ||||||| |||||| ||||    
T  21515209 ttgaatgtataattactaatatggacatagctaaatagaaat 21515250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 10683869 - 10683721
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||| | ||| ||||||||||||||||||     
T  10683869 aattgattctgacagaattgattttgagagaattgatttatgtctcgatgcaataatgcagaattaattaaacaaactgaatgttgtttggatagttttt 10683770  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  10683769 atcaaaatttcttttgaatgtataattactaaaatggacatagctaaat 10683721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 27825690 - 27825541
Alignment:
Q  17 tgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaatt 116  Q
    ||||| |||||||| ||| ||||||||||||||||||||  | |||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  27825690 tgacataattgattttgagagaattgatttatgtttggacacgataatatagaattgattaaatagaatgaatgttgtttggatagttttgatcaaaatt 27825591  T
Q  117 acttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| ||||||||||||  ||||| ||||||| |||||||||||||||    
T  27825590 acttttaaatgtataattattaaaatggacatagctaaatacaaataaat 27825541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20837899 - 20838063
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | |||||||||||| ||| | ||||||||||||||  ||| |||||||||| ||||||||||| | | ||| ||||||||| ||    
T  20837899 ctgatagaattgattcttacagaattgattttgaaaaaattgatttatgttatgatacaataatgcataattgattaaataaattgaatgttgtttgaat 20837998  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaa 165  Q
    | |||||||||||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  20837999 aattttgatcaaaattgcttttgaacatataattactaaaatggacatagttaaatacaaataaa 20838063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 31745441 - 31745564
Alignment:
Q  43 atttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||| | |||| | | ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  31745441 atttatgtttggatacgataacgtataattgattaaacagaataaatgttgtttggatagttttgatcaaaattgcttttgaatgtataattactaaaat 31745540  T
Q  143 agacatagttaaatacaaataaat 166  Q
     ||||||| |||||| ||||||||    
T  31745541 ggacatagctaaataaaaataaat 31745564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 4147473 - 4147374
Alignment:
Q  67 agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||  |||||| ||||||||    
T  4147473 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaaattgctcttgaatgtataattactaaaatagacataactaaataaaaataaat 4147374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 921722 - 921607
Alignment:
Q  36 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 135  Q
    ||||||||||||||||||||| |||||| | || |||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||    
T  921722 agaattgatttatgtttggatacaataaagtaggattgattaaacagaatggatgttgtttggatag-tttgatcaaaattatttttgaatgtataatta 921624  T
Q  136 ccaaaatagacatagtt 152  Q
      ||||| || ||||||    
T  921623 ttaaaatggatatagtt 921607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 29409348 - 29409399
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 140  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| ||||||    
T  29409348 tgttgtttggatagtttgaatcaaaattaattttgaatgtataatgaccaaa 29409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 29682169 - 29682119
Alignment:
Q  91 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    |||||||||| |||  ||||||||||||||||||| |||||||||||||||    
T  29682169 ttgtttggatggttgagatcaaaattacttttgaaggtataattaccaaaa 29682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 30019002 - 30018964
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30019002 agaagggttagaaaaattaatgaggacagggatggaatt 30018964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 5584031 - 5584071
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  5584031 agaattgattttgatagaattgattttgacagaattgattt 5584071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 30019956 - 30019916
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  30019956 agaattgattctgacagaattgattctgaaagaattgattt 30019916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 4147533 - 4147494
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  4147533 agaattgattctgacagaattgattctgatagaattgatt 4147494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 13739210 - 13739159
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 140  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  13739210 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 13739159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 13744710 - 13744659
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 140  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  13744710 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 13744659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 16122100 - 16122150
Alignment:
Q  91 ttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||| ||||    
T  16122100 ttgtttggatagttgagatcaaaattgcttttgaaggtataattacaaaaa 16122150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 21254975 - 21255028
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||| | ||||||  ||||||||| |||||||| ||||||||||||||||    
T  21254975 tgttgtttcggtagtttgaatcaaaattgcttttgaaagtataattaccaaaat 21255028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29541806 - 29541975
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29541806 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 29541905  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29541906 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 29541975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3260322 - 3260491
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3260322 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatacagaattgattaaacagaatgattgttgtttggat 3260421  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260422 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 3260491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 42664088 - 42663919
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42664088 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 42663989  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42663988 agttttgatcaaaattatttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 42663919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 14083200 - 14083004
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14083200 agaattgattctgaaagaattgattttgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 14083101  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||   ||||||||||||||||||||||||||    
T  14083100 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatggaatt 14083004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33115348 - 33115147
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33115348 ctgacagaattgattctgaaagaattgattttgacagaattgatttatgtttggatacaataatgcagaattgattaaacagaatgattgttgtttggat 33115249  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaagggttagaaaaattaatgagggcagggatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||   |||||||||||||||||||||    
T  33115248 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa--atta-ctaaattaatgagggcagggatg 33115152  T
Q  201 gaatt 205  Q
    |||||    
T  33115151 gaatt 33115147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 169
Target Start/End: Original strand, 33082342 - 33082505
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||| |||||||||| ||| |||||||||||||||||| || |||||||| ||||||||||||| ||||||  |||||||||||||||||    
T  33082342 agaattgattctgatagaattgattttgagagaattgatttatgtttgaatacaataatgtagaattgattaaatagaatggatgttgtttggatagttt 33082441  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaataga 169  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  33082442 tgatcaaaattgcttttgaatgtataattactaaaatggacatagttaaatacaaataaataga 33082505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 27737954 - 27738110
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||    
T  27737954 agaattgattctgatagaattaattctgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttt 27738053  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  27738054 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 27738110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 31906146 - 31905981
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| ||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||    
T  31906146 ctgatagaattgattatgacataattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggat 31906047  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  31906046 agtttttatcaaaattgcttttgaatgtataattactaaaatggacatagataaattcaagtaaat 31905981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 33386873 - 33387033
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||| | |||||||| ||| ||||||| ||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  33386873 agaattgattctgatataattgattttgagagaattggtttatgtttggatacaataatgtagaattgattaaatagaatgaatgttgtttggatagttt 33386972  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||  |||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  33386973 tgatcaaaattgtttttgaatgtataattactaaaatggacatagctaaatacaaataaat 33387033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 10900821 - 10900676
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 120  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||| ||||||||||||||| ||    
T  10900821 agaattgattttgagagaattgatttatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggataattttgatcaaaattaatt 10900722  T
Q  121 ttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||    
T  10900721 ttgaatgtataattactaaaatggacatagctaaatacaaataaat 10900676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 41741612 - 41741777
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||||||| |||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||    
T  41741612 ctgatagaattgattttgatagaattgattttgaaagaattaatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggat 41741711  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| || |||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  41741712 agtttttattaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 41741777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 33233148 - 33232993
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  33233148 agaattgattctgacagaattgattatgagagaattgatttatgtttggatacaataatgcagaatcgattaaacaaactgaatgttgtttggatagttt 33233049  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||| ||||    
T  33233048 t-atcaaaattgcttttgaatgtataattactaaaatggacatagctaaatagaaat 33232993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 37046266 - 37046116
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| | | |||||||||||||||||| || |||||||||||||||||||||||| | ||| ||||||||||||  |||    
T  37046266 agaattgattctgacagaattgattttaagagaattgatttatgtttgaatacaataatgcagaattgattaaacaaactgaatgttgtttggatgattt 37046167  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  37046166 tgatcaaaattgcttttgaatgtataattactaaaatagacatagctaaat 37046116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 7071434 - 7071577
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgc--agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattac 118  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||  | ||||||||||||| | ||| ||||||||||||||||||||||||||||      
T  7071434 agaaatgattctgacagaattgatttatgtttggatacaataatgcgcataattgattaaacaaactgaatgttgtttggatagttttgatcaaaattgt 7071533  T
Q  119 ttttgaatgtataattaccaaaatagacatagttaaatacaaat 162  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||    
T  7071534 ttttgaatgtataattaccaaaatggacataggtaaatagaaat 7071577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 25256232 - 25256384
Alignment:
Q  4 aaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagt 103  Q
    |||||||||||| ||||| || ||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||   |||||||| ||||||    
T  25256232 aaagaattgattctgacataaatgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacggaattgatgttgtttagatagt 25256331  T
Q  104 tttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    |||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  25256332 tttgatcaaaattgtttttgaatgtataattactaaaatggacatagttaaat 25256384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 25320021 - 25320173
Alignment:
Q  4 aaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagt 103  Q
    |||||||||||| ||||| || ||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||   |||||||| ||||||    
T  25320021 aaagaattgattctgacataaatgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacggaattgatgttgtttagatagt 25320120  T
Q  104 tttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    |||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  25320121 tttgatcaaaattgtttttgaatgtataattactaaaatggacatagttaaat 25320173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 4295634 - 4295474
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||| |||||||||||||||||| || |||||||  | ||||||||||||| | ||| |||||||||||||  ||    
T  4295634 agaattgattctgacataattgattttgagagaattgatttatgtttgaatacaataatttaaaattgattaaacaaattgaatgttgtttggatatgtt 4295535  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||| |||||||||||||||||| ||||| |||| |||||||||||| |||||    
T  4295534 tgatcaaaattatttttgaatgtataattactaaaatggacagagttaaatacaagtaaat 4295474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 7 - 166
Target Start/End: Original strand, 11017831 - 11017990
Alignment:
Q  7 gaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 106  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||| ||| | ||| ||||||||||||||||||    
T  11017831 gaattgattctgacataattgattttgatagaattgatttatgtttggatataataatgcagaattgattagacaaactgaatgttgtttggatagtttt 11017930  T
Q  107 gatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
     |||||||||  ||||||||||||  |||| ||||| ||||||||||||| ||| |||||    
T  11017931 catcaaaattgtttttgaatgtatggttactaaaatggacatagttaaattcaagtaaat 11017990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 40980102 - 40979959
Alignment:
Q  23 aattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactttt 122  Q
    |||||||| ||| |||||||| |||||| ||||| |||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||||  ||||    
T  40980102 aattgattttgagagaattgaattatgtatggatacaataatgcaaaattgattaaacaaattaaatgttgtttggatagttttgatcaaaattgatttt 40980003  T
Q  123 gaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||    
T  40980002 gaatgtataattactaaaatggacatagctaaatacaaataaat 40979959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 41039549 - 41039683
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||     
T  41039549 aattgattgtgacagaattgattttgagagaactgatttatgtttggatacaataatgcagaattgattaaacgaaatgaatgttgtttggatagttttt 41039648  T
Q  108 atcaaaattacttttgaatgtataattaccaaaat 142  Q
     |||||||| ||||||||||| ||||||| |||||    
T  41039649 ttcaaaattgcttttgaatgtgtaattactaaaat 41039683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 166
Target Start/End: Original strand, 8957929 - 8958057
Alignment:
Q  38 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 137  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||||||||||||||||||     
T  8957929 aattgatttatatttagatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattact 8958028  T
Q  138 aaaatagacatagttaaatacaaataaat 166  Q
    |||||||| |||| ||||| ||| |||||    
T  8958029 aaaatagatatagctaaattcaagtaaat 8958057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 2526947 - 2526848
Alignment:
Q  67 agaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||  |||||| ||||||||    
T  2526947 agaattgattaaacagaatgaatgttgtttggatagttttgatcaaaattgctcttgaatgtataattactaaaatagacataactaaataaaaataaat 2526848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 39236044 - 39236186
Alignment:
Q  24 attgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttg 123  Q
    ||||||| ||| |||||||||||||||||| ||  ||||||||||||||||||||||| | ||| ||||||||||||| |||| || |||||| ||||||    
T  39236044 attgattatgagagaattgatttatgtttgaatataataatgcagaattgattaaacaaactgaatgttgtttggataatttt-attaaaattgcttttg 39236142  T
Q  124 aatgtataattaccaaaatagacatagttaaatacaaataaata 167  Q
    ||||||||||||| ||||| ||||||| |||||| |||| ||||    
T  39236143 aatgtataattactaaaatggacatagctaaatagaaattaata 39236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 53036 - 53196
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| | | | ||||||||||||||||||| | || ||||| | |||| |||||| | ||| |||||||||||| ||||    
T  53036 agaattgattctgacataattgattttaagataattgatttatgtttggatacgatgatgcacagttgaataaacaaattgaatgttgtttggatggttt 53135  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| |||||||| |||||||||| ||||| ||||||  ||||||||| |||||    
T  53136 tgatcaaaattgcttttgaaagtataattactaaaatggacataactaaatacaagtaaat 53196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 19357164 - 19357056
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||| ||||||||     
T  19357164 aattgattttaatagaattgattctgacataattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttgtatagttttt 19357065  T
Q  108 atcaaaatt 116  Q
    || ||||||    
T  19357064 atgaaaatt 19357056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 20069081 - 20069241
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| | ||| |||||||| | | | ||||||||||  ||||||| |||||||||| |||||||||||||   ||| |||||||||||||||||    
T  20069081 agaattgattctaacataattgattttaagataattgatttacatttggatacaataatgcaaaattgattaaacacgttgaatgttgtttggatagttt 20069180  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||  |||||||||||||| ||| ||||  |||||| ||||||||| ||||||    
T  20069181 tgatcaaaattgtttttgaatgtataagtactaaaaccgacataattaaatacatataaat 20069241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 3260815 - 3260853
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3260815 agaagggttagaaaaattaatgagggcagggatggaatt 3260853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 29542418 - 29542456
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29542418 agaagggttagaaaaattaatgagggcagggatggaatt 29542456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 42663585 - 42663547
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42663585 agaagggttagaaaaattaatgagggcagggatggaatt 42663547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 29367038 - 29367110
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaaca 81  Q
    |||||||| | ||| |||||||| ||| ||||||||||||||||||||| |||||||| ||| |||||||||||    
T  29367038 aattgattataacataattgatt-tgagagaattgatttatgtttggatacaataatgtagatttgattaaaca 29367110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 7178796 - 7178743
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||| ||||||  ||||||||| |||||||| ||||||||||||||||    
T  7178796 tgttgtttgggtagtttgaatcaaaattgcttttgaaagtataattaccaaaat 7178743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 19784831 - 19784778
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtat-aattaccaaaa 141  Q
    |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||    
T  19784831 tgttgtttggatagttttgatcaaaattgcttttaaatgtgtaaattaccaaaa 19784778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 3260297 - 3260337
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  3260297 agaattgattctgacagaattgattctgaaagaattgattt 3260337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 4569176 - 4569228
Alignment:
Q  90 gttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||| ||||||| ||||||  ||||||||| ||||||||||||||    
T  4569176 gttgtttggataattttgataaaaattgattttgaatgcataattaccaaaat 4569228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 42664113 - 42664073
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  42664113 agaattgattctgacagaattgattctgaaagaattgattt 42664073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 2527007 - 2526968
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  2527007 agaattgattctgacagaattgattctgatagaattgatt 2526968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 4295664 - 4295625
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatt 45  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  4295664 agaattgattttgacagaattgattttgatagaattgatt 4295625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 32454555 - 32454504
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 140  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  32454555 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 32454504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 3747684 - 3747737
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||||||| |||||||||  ||||  ||||| ||||||||||||    
T  3747684 tgttgtttggatagttttaatcaaaattgattttacatgtaaaattaccaaaat 3747737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 22482207 - 22482163
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataat 133  Q
    |||||||||||||||||  |||||||||  |||||||||||||||    
T  22482207 tgttgtttggatagtttgaatcaaaattgattttgaatgtataat 22482163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 22482322 - 22482282
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||||||| |||||||||| ||| |||||||||||    
T  22482322 agaattgattttgatagaattgattttgagagaattgattt 22482282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 29541781 - 29541821
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||| ||| |||||||||||||||||| |||||||||||    
T  29541781 agaattaattctgacagaattgattctgaaagaattgattt 29541821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 24035586 - 24035755
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24035586 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 24035685  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24035686 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 24035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 39382404 - 39382573
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39382404 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 39382503  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39382504 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 39382573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 49128369 - 49128200
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49128369 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 49128270  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49128269 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 49128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 24247258 - 24247089
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24247258 ctgaaagaattgattttgtcagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 24247159  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24247158 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaatagaa 24247089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 16202532 - 16202692
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||||||| | |||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||| | ||||| |||||||||||||||||    
T  16202532 agaattgattttgataaaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaatataatgaatgttgtttggatagttt 16202631  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  16202632 tgatcaaaattgcttttgaatgtataattactaaaatggacatagctaaatacaaataaat 16202692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 39733515 - 39733359
Alignment:
Q  10 ttgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgat 109  Q
    |||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||| | ||| |||||||||||||||||||||    
T  39733515 ttgattatgacagaattgattttgagagaattgatttatgtttggatacaataatgtagaattgattaaacaaactgaatgttgtttggatagttttgat 39733416  T
Q  110 caaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  39733415 caaaattaattttgaatgtataattactaaaacggacatagctaaatacaaataaat 39733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 29385445 - 29385605
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||| |||    
T  29385445 agaattgattttgacagaattgattttgaaagaattgatttatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggataattt 29385544  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  29385545 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 29385605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28963252 - 28963417
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| |||||||||||||| ||| ||||||||||||||||| ||| |||||||||| ||||||||||||| | ||| ||||||||||||    
T  28963252 ctgatagaattgattctgacagaattgattttgagagaattgatttatgtttagatacaataatgcaaaattgattaaacaaactgaatgttgtttggat 28963351  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||| |||||    
T  28963352 agtttttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaattcaagtaaat 28963417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 50523279 - 50523428
Alignment:
Q  17 tgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaatt 116  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  50523279 tgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttggatagttttgatcaaaatt 50523378  T
Q  117 acttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
      ||||||| |||||||||| ||||| ||||||  |||||||||||||||    
T  50523379 gattttgaaggtataattactaaaatggacatatctaaatacaaataaat 50523428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 26459686 - 26459526
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| | | ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||    
T  26459686 agaattgattctgacataattgattttaagagaattgatttatgtttggatacaataatgcaaaattgattaaacaaattgaatgttgtttggatagttt 26459587  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||  ||||||||| |||||    
T  26459586 tgatcaaaattacttttgaaagtataattactaaaatggacataactaaatacaagtaaat 26459526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 45106480 - 45106320
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||||||    
T  45106480 agaattgattctgacataattgattttgagagaattgatttatgtttggatacaataatgcaaaattgattaaacaaactgaatgttgtttggatagttt 45106381  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | |||||||||  |||||||||||||||||  ||||||||||||| ||||| ||| |||||    
T  45106380 ttatcaaaattgattttgaatgtataattaataaaatagacatagctaaattcaagtaaat 45106320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 22605758 - 22605906
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    ||||||||||  ||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||  ||||| |||||||||||||||||    
T  22605758 agaattgattgggacagaattgattttgagagaattgatttatgtttggatacaataatgcagtattgattaaac--aatgaatgttgtttggatagttt 22605855  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  22605856 ttatcaaaattgcttttgaatgtataattactaaaattgacatagctaaat 22605906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 48407617 - 48407491
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  48407617 ctgacagaattgattttgatagaattgattgtgacagaattgatttatgtttggatacaataatgcagaattgattaaacaaaatgaatgttgtttggat 48407518  T
Q  101 agttttgatcaaaattacttttgaatg 127  Q
    | |||| ||||||||| ||||||||||    
T  48407517 aatttttatcaaaattgcttttgaatg 48407491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 5937315 - 5937475
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||| ||||||| | | ||||||||||||| |||| || |||||||||||||||||||||||| | ||| ||||||||| ||| |||    
T  5937315 agaattgattatgacagcattgatttttagagaattgatttatatttgaatacaataatgcagaattgattaaacaaactgaatgttgtttgaatatttt 5937414  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||    
T  5937415 tgatcaaaattgattttgaatgtataattactaaaacggacatagttaaatacaaataaat 5937475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 51833472 - 51833618
Alignment:
Q  20 cagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattact 119  Q
    ||||||| |||| || |||||||||||||||||| || | |||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||    
T  51833472 cagaattaattcggagagaattgatttatgtttgaatacgataacgtagaattgattaaacagaatgaatgttgtttggatagttttgaacaaaattgct 51833571  T
Q  120 tttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  51833572 tttgaatgtataattactaaaatggacatagctaaataaaaataaat 51833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 53663029 - 53663194
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| ||||| |||||||| | | ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||    
T  53663029 ctgatagaattgattatgacataattgattttaaaagaattgatttatgtttggatacaataatgcaaaattgattaaacaaactgaatgttgtttggat 53663128  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||| | |||||||  |||||||||||||||||| ||||||||||||  ||||| ||| |||||    
T  53663129 agtttttaacaaaattgtttttgaatgtataattactaaaatagacataactaaattcaagtaaat 53663194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 56561194 - 56561046
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| | |||||||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||| | ||| ||||| ||||||    
T  56561194 ctgatagaattgattctcacagaattgattatgagagaattgatttatgtttggatacaataacgcagaattgattaaacaaactgaatgttggttggat 56561095  T
Q  101 agttttgatcaaaattacttttgaatgtataattaccaaaatagacatag 150  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| |||||||    
T  56561094 agtttt-atcaaaattgcttttgaatgtataattactaaaatggacatag 56561046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 53403525 - 53403686
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| |||||||||| ||||||||||||| | ||| |||| |||||||| |||    
T  53403525 agaattgattatgacataattgattttgagagaattggtttatgtttggatacaataatgcataattgattaaacaaactgaatgttatttggataattt 53403624  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaata 167  Q
    | |||||||||  |||||||||||||||||| ||||| ||||| ||||||| ||| ||||||    
T  53403625 ttatcaaaattgattttgaatgtataattactaaaatggacatggttaaattcaagtaaata 53403686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 8510842 - 8510686
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    ||||| |||||| | |||||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||| ||||| | |||||||||  || |||||    
T  8510842 aattggttttgatataattgattctgatagaattgatttatgtttggatacaataatgcataattgataaaatagaataaatgttgtttgattaattttg 8510743  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataa 164  Q
    |||||||||  |||||||||||||||||  ||||| || ||||||||||||||||||    
T  8510742 atcaaaattgtttttgaatgtataattattaaaatggatatagttaaatacaaataa 8510686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 166
Target Start/End: Original strand, 30417826 - 30417954
Alignment:
Q  38 aattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattacc 137  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||| |||||||||||||||||||     
T  30417826 aattgatttatgtttagatacaataatgcagaattgattaaacaaactgaatgttgtttggatagtttttatcaaaattgcttttgaatgtataattact 30417925  T
Q  138 aaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||||  ||||| ||| |||||    
T  30417926 aaaatagacataactaaattcaagtaaat 30417954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 38768497 - 38768352
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| ||||||| |||||| ||| | ||||||||||||| ||||| ||||| |||||||||||||||||| ||||| |||||||||||||        
T  38768497 agaattgattgtgacaga-ttgattttgagataattgatttatgtctggatacaatactgcagaattgattaaacaaaatgaatgttgtttggata---- 38768403  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  38768402 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaat 38768352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 36212921 - 36212790
Alignment:
Q  7 gaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagtttt 106  Q
    ||||||||||||  | |||||| | | ||| |||||||||||||||||||||||||||||| | ||||||||| | ||||  |||||||| |||||||||    
T  36212921 gaattgattttgttataattgagtttaacaaaattgatttatgtttggatgcaataatgcatatttgattaaataaaatgtatgttgtttagatagtttt 36212822  T
Q  107 gatcaaaattacttttgaatgtataattacca 138  Q
    ||| ||||| ||||||||||||||||||||||    
T  36212821 gattaaaatcacttttgaatgtataattacca 36212790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 28912281 - 28912154
Alignment:
Q  36 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataatta 135  Q
    |||||| |||||||||||||| ||||||||  ||||||||||||  |||||| |||||||| |||| ||||||||||| || ||||||||||||||||||    
T  28912281 agaatttatttatgtttggatacaataatgtggaattgattaaa--gaatgaatgttgtttagataattttgatcaaa-ttgcttttgaatgtataatta 28912185  T
Q  136 ccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||| |||||| ||||||| ||||||||    
T  28912184 ctaaaatggacataattaaataaaaataaat 28912154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 51677628 - 51677532
Alignment:
Q  70 attgattaaacagaatgattgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    ||||||||||| |||||| ||||||||| ||| ||||||||||||||| |||| ||| ||||||||| ||||| |||||||||||||||||||||||    
T  51677628 attgattaaacggaatgagtgttgtttgaatatttttgatcaaaattatttttaaatatataattactaaaatggacatagttaaatacaaataaat 51677532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 49724465 - 49724390
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaaca 81  Q
    |||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  49724465 agaattgattatgacataattgattttgagagaattggtttatgtttggatacaataatgcataattgattaaaca 49724390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 29810004 - 29810118
Alignment:
Q  20 cagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattact 119  Q
    ||||||||| | | ||| |||||||||||||||||||  ||||||||| ||| |||||||| |||||| |||| |||||||||||||||| |||| |  |    
T  29810004 cagaattgagtttaacataattgatttatgtttggataaaataatgcaaaat-gattaaaccgaatgaatgttttttggatagttttgattaaaactgtt 29810102  T
Q  120 tttgaatgtataatta 135  Q
    ||| || |||||||||    
T  29810103 ttttaacgtataatta 29810118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 18140603 - 18140565
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18140603 agaagggttagaaaaattaatgagggcagggatggaatt 18140565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 24246769 - 24246731
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24246769 agaagggttagaaaaattaatgagggcagggatggaatt 24246731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 31431012 - 31431050
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31431012 agaagggttagaaaaattaatgagggcagggatggaatt 31431050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 39382934 - 39382972
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39382934 agaagggttagaaaaattaatgagggcagggatggaatt 39382972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 49127816 - 49127778
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49127816 agaagggttagaaaaattaatgagggcagggatggaatt 49127778  T

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Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 24038038 - 24038076
Alignment:
Q  167 agaagggttagaaaaattaatgagggcagggatggaatt 205  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  24038038 agaagggttagaaaaattaatgaggacagggatggaatt 24038076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31430910 - 31430944
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  31430910 ctgaaagaattgattttgacagaattgattctgac 31430944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 51677686 - 51677644
Alignment:
Q  4 aaagaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  51677686 aaagaattgattctgatagaattgattctgacagaattgattt 51677644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 52056541 - 52056599
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaa 79  Q
    |||||||||| ||| | |||||||||||||||| ||||||||||||| |||| ||||||    
T  52056541 agaattgattatgatataattgatttatgtttgaatgcaataatgcataattcattaaa 52056599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 24035561 - 24035601
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  24035561 agaattgattctgacagaattgattctgaaagaattgattt 24035601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 24247283 - 24247243
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  24247283 agaattgattctgacagaattgattctgaaagaattgattt 24247243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 31430885 - 31430925
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  31430885 agaattgattctgacagaattgattctgaaagaattgattt 31430925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 39382379 - 39382419
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  39382379 agaattgattctgacagaattgattctgaaagaattgattt 39382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 49128394 - 49128354
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgattt 46  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  49128394 agaattgattctgacagaattgattctgaaagaattgattt 49128354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 29490920 - 29490971
Alignment:
Q  36 agaattgatttatgtttggatgcaataatgcagaattgattaaacagaatga 87  Q
    |||||||||||||||||||||  |||||| || ||||||||||||| |||||    
T  29490920 agaattgatttatgtttggatctaataatacataattgattaaacaaaatga 29490971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 43781615 - 43781666
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 140  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||| ||||||    
T  43781615 tgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 43781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51677674 - 51677627
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttat 48  Q
    |||| |||||||||| |||||||||||||| ||| |||||||||||||    
T  51677674 ctgatagaattgattctgacagaattgattttgagagaattgatttat 51677627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 51922929 - 51922878
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaa 140  Q
    |||||||||||||||||  |||||||||  ||||||||||||||| ||||||    
T  51922929 tgttgtttggatagtttgaatcaaaattgattttgaatgtataatgaccaaa 51922878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 25312705 - 25312648
Alignment:
Q  88 ttgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaataga 145  Q
    ||||||||||||||  ||  ||||||||| |||||  |||||||||||||||||||||    
T  25312705 ttgttgtttggatacattgaatcaaaattgcttttagatgtataattaccaaaataga 25312648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 38306000 - 38305947
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||  || ||||||||||  ||||||||| ||||||||||||||    
T  38306000 tgttgtttggataacttggatcaaaattgattttgaatgcataattaccaaaat 38305947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 41866144 - 41866091
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    |||||||||||||||||    |||||||| ||||| ||||||||||||||||||    
T  41866144 tgttgtttggatagtttgtgccaaaattaattttgcatgtataattaccaaaat 41866091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 13167511 - 13167459
Alignment:
Q  92 tgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaatag 144  Q
    ||||||||||| ||  ||||||||| ||||| |||| ||||||||||||||||    
T  13167511 tgtttggatagattgaatcaaaattgcttttaaatgcataattaccaaaatag 13167459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 20191782 - 20191834
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaa 141  Q
    |||||||||||||  ||  |||||||||| |||| ||||||||||||||||||    
T  20191782 tgttgtttggataacttgaatcaaaattaattttaaatgtataattaccaaaa 20191834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31430895 - 31430939
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatt 45  Q
    |||| |||||||||| ||| |||||||||| ||||||||||||||    
T  31430895 ctgacagaattgattctgaaagaattgattttgacagaattgatt 31430939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 38412 - 38252
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||| ||||||||    
T  38412 agaattgattttgacagaattgattttgagagaattgatttatgtttggatacaataatgcagaattgattaaacaaactgaatgttgtttcgatagttt 38313  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    | ||||||||| ||||||||||| ||||||| ||||| ||||||| ||||| ||| |||||    
T  38312 ttatcaaaattgcttttgaatgtttaattactaaaatggacatagctaaattcaagtaaat 38252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 32459 - 32609
Alignment:
Q  6 agaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttt 105  Q
    |||||||||| |||||||||||||| ||| | ||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  32459 agaattgattgtgacagaattgattttgagataattgatttatgtttggatacaataatgcataattgattaaacaaaatgaatgttgtttggatagttt 32558  T
Q  106 tgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaat 156  Q
    | ||||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  32559 ttatcaaaattgcttttgaatgtataattactaaaatggacatagctaaat 32609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 9187 - 9332
Alignment:
Q  21 agaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttgatcaaaattactt 120  Q
    |||||||||  ||| ||||||||||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||  ||    
T  9187 agaattgatattgaaagaattgatttatgtttggatacaataatgcataattgattaaacaaactgaatgttgtttggatagttttgatcaaaattgatt 9286  T
Q  121 ttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    || ||||||||||||| ||||| ||||||| |||||||||||||||    
T  9287 ttaaatgtataattactaaaatggacatagctaaatacaaataaat 9332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4802 - 4636
Alignment:
Q  1 ctgaaagaattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggat 100  Q
    |||| |||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||   |||  |||||||||||    
T  4802 ctgatagaattgattctgacagaattgattttaacagaattgatttatgtttggatacaataatgtagaattgattaaacaagctgaacgttgtttggat 4703  T
Q  101 a-gttttgatcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |  |||| ||||||||| |||||||||||||||||||  |||| ||||||| ||||| ||| |||||    
T  4702 atttttttatcaaaatttcttttgaatgtataattactgaaatggacatagctaaattcaagtaaat 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 92244 - 92086
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| ||| ||| |||||||||||||  || |||||||||||||||||||||||| | | | ||||||| ||||||||||     
T  92244 aattgattatgacagaattgattttgagagatttgatttatgttt--atacaataatgcagaattgattaaacaaactaaatgttgttaggatagttttt 92147  T
Q  108 --atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
      ||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| |||||    
T  92146 ttatcaaaattgcttttgaatgtataattactaaaatggacatagttaaattcaagtaaat 92086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 301665 - 301823
Alignment:
Q  8 aattgattttgacagaattgattctgacagaattgatttatgtttggatgcaataatgcagaattgattaaacagaatgattgttgtttggatagttttg 107  Q
    |||||||| |||||||||||||| | | | |||||||||| ||||||||   |||||||| |||||||||||||   ||| |||||||||||||||||||    
T  301665 aattgattctgacagaattgattttaagataattgatttacgtttggatattataatgcaaaattgattaaacacgttgaatgttgtttggatagttttg 301764  T
Q  108 atcaaaattacttttgaatgtataattaccaaaatagacatagttaaatacaaataaat 166  Q
    |||||||||  |||||||||||||| ||| ||||  |||||| ||||||||| ||||||    
T  301765 atcaaaattgtttttgaatgtataagtactaaaaccgacataattaaatacatataaat 301823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 17471 - 17360
Alignment:
Q  58 caataatgcagaattgattaaacagaatgattgttgtttggatagttttg---atcaaaattacttttgaatgtataattaccaaaatagacatagttaa 154  Q
    |||||||||||||||||||||||| | | | ||||||| ||||||||||    |||||||||  |||||||| ||||||||| ||||| |||||||||||    
T  17471 caataatgcagaattgattaaacaaactaaatgttgttcggatagttttttttatcaaaattgtttttgaatatataattactaaaatggacatagttaa 17372  T
Q  155 atacaaataaat 166  Q
    || ||| |||||    
T  17371 attcaagtaaat 17360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 46767 - 46714
Alignment:
Q  89 tgttgtttggatagttttgatcaaaattacttttgaatgtataattaccaaaat 142  Q
    ||||||||||||||||   |||||||||  ||||| ||||||||||||||||||    
T  46767 tgttgtttggatagttcaaatcaaaattgattttggatgtataattaccaaaat 46714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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