View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16573_high_22 (Length: 355)
Name: NF16573_high_22
Description: NF16573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16573_high_22 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 22 - 355
Target Start/End: Original strand, 45974059 - 45974392
Alignment:
| Q |
22 |
tggcattgactattttgcaactctccaacccattacaagttaaatcaacagtgcacaatgtcacaagttcacaaccaaccacattacatcaccatcacat |
121 |
Q |
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| T |
45974059 |
tggcattgactattttgcaactctccaacccattacaagttaaatcaacagtgcacaatgtcacaagttcacaaccaaccacattacatcaccatcacat |
45974158 |
T |
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| Q |
122 |
tcacgttttctctgtgtttttcagttaccagtacctccattattattagcactatagcatatcacatttcctctttatcggaaaaccatatcccgcttta |
221 |
Q |
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| T |
45974159 |
tcacgttttctctgtgtttttcagttaccagtacctccattattattagcactatagcatatcacatttcctctttatcggaaaaccatatcccgcttta |
45974258 |
T |
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| Q |
222 |
aacatcgcaactacgcgattatacttatcaatctgtcttctaagtttcttaagagtaaaatacaattcagcttccaactatatattatgcataataatta |
321 |
Q |
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| T |
45974259 |
aacatcgcaactacgcgattatacttatcaatctgtcttctaagtttcttaagagtaaaatacaattcagcttccaactatatattatgcataataatta |
45974358 |
T |
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| Q |
322 |
gttcaagtgctgttatttgattgttgcaataaga |
355 |
Q |
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| T |
45974359 |
gttgaagtgctgttatttgattgttgcaataaga |
45974392 |
T |
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