View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16573_high_38 (Length: 266)
Name: NF16573_high_38
Description: NF16573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16573_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 39641736 - 39641498
Alignment:
| Q |
18 |
aaaccacatctatgtgagtaagttgctcctgaatttcatgtgaatcatttaggttaggtgtatatctgagtaattttgatcggagtcgtggatatgcttg |
117 |
Q |
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| T |
39641736 |
aaaccacatctatgtgagtaagttgctcctgaatttcatgtgaatcatttaggttaggtgtatatctgagtaattttgatcggagtcgtggatatgcttg |
39641637 |
T |
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| Q |
118 |
ttcgaaagggtgttattattataccaatacttggcccaggtcaaggccttgtgccacccctttggaatattgaatttgaagcatctcgaatacttatcta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39641636 |
ttcgaaagggtgttattattataccaatacttggcccaggtcaaggccttgtgccacccctttggaatattgaatttgaagcatctcgaatacttatcta |
39641537 |
T |
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| Q |
218 |
aaaccttttctaaggcctctgattgctcatttgtctgtg |
256 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
39641536 |
aaaccttttctaaggcctctgattgctcatttgtctgtg |
39641498 |
T |
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