View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16573_low_36 (Length: 286)
Name: NF16573_low_36
Description: NF16573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16573_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 276
Target Start/End: Original strand, 32908244 - 32908502
Alignment:
| Q |
18 |
tcaaattagcgaccaaaattggcagatatacatgcggttgttatatattaagccaattaattaattggatgtgcatgtaatgaataatacattttttgtt |
117 |
Q |
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| T |
32908244 |
tcaaattagccaccaaaattggcagatatacatgcggttgttatatattaagccaattaattaattggatgtgcatgtaatgaataatacattttttgtt |
32908343 |
T |
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| Q |
118 |
tggatttgcaaattacttttggttttactttctctcttgagattgagttgatgatgaacctggtgatgcatgttagcattgtaagtgttgttgtacattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32908344 |
tggatttgcaaattacttttggttttactttctctcttgagattgagttggtgatgaacctggtgatgcatgttagcattgtaagtgttgttgtacattt |
32908443 |
T |
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| Q |
218 |
gattgaacctaatgttgtcttgttcatactctacttttacgtggatagcagtgtctctg |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32908444 |
gattgaacctaatgttgtcttgttcatactctacttttacgtggatagcagtgtctctg |
32908502 |
T |
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