View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16573_low_38 (Length: 281)

Name: NF16573_low_38
Description: NF16573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16573_low_38
NF16573_low_38
[»] chr5 (28 HSPs)
chr5 (2-47)||(7673230-7673275)
chr5 (2-44)||(24350930-24350972)
chr5 (2-44)||(24351483-24351525)
chr5 (1-44)||(16526250-16526293)
chr5 (1-44)||(16528652-16528695)
chr5 (2-44)||(35159755-35159797)
chr5 (2-44)||(43394965-43395007)
chr5 (1-95)||(41092901-41092995)
chr5 (1-42)||(41093080-41093121)
chr5 (1-95)||(16305348-16305441)
chr5 (1-36)||(11313700-11313735)
chr5 (1-36)||(11313862-11313897)
chr5 (1-44)||(11314032-11314075)
chr5 (1-44)||(14166193-14166236)
chr5 (1-44)||(19121959-19122002)
chr5 (1-44)||(19122295-19122338)
chr5 (2-44)||(12442164-12442206)
chr5 (2-44)||(16529009-16529051)
chr5 (1-47)||(35159466-35159512)
chr5 (2-44)||(43395142-43395184)
chr5 (2-47)||(9488081-9488126)
chr5 (1-44)||(7127611-7127654)
chr5 (1-44)||(16529187-16529230)
chr5 (1-44)||(26523170-26523213)
chr5 (3-42)||(26523268-26523307)
chr5 (12-44)||(24326577-24326609)
chr5 (12-44)||(24350732-24350764)
chr5 (12-44)||(24351286-24351318)
[»] chr7 (41 HSPs)
chr7 (2-46)||(2853228-2853272)
chr7 (1-47)||(35124774-35124820)
chr7 (1-45)||(23591641-23591685)
chr7 (1-44)||(4680906-4680949)
chr7 (1-44)||(11646407-11646450)
chr7 (1-44)||(11650018-11650061)
chr7 (1-44)||(16671657-16671700)
chr7 (1-44)||(17646025-17646068)
chr7 (1-44)||(23591424-23591467)
chr7 (1-44)||(27716319-27716362)
chr7 (1-44)||(46264293-46264336)
chr7 (2-44)||(9141972-9142014)
chr7 (2-44)||(18486686-18486728)
chr7 (2-44)||(18487203-18487245)
chr7 (1-47)||(19222155-19222201)
chr7 (2-44)||(45419647-45419689)
chr7 (2-44)||(48640812-48640854)
chr7 (2-43)||(1566519-1566560)
chr7 (2-42)||(40686903-40686943)
chr7 (1-44)||(11646219-11646262)
chr7 (5-44)||(27716545-27716584)
chr7 (1-44)||(30991512-30991555)
chr7 (1-44)||(43059243-43059286)
chr7 (1-44)||(45419852-45419895)
chr7 (2-44)||(2526964-2527006)
chr7 (2-44)||(11645942-11645984)
chr7 (2-44)||(12140872-12140914)
chr7 (2-44)||(16362701-16362743)
chr7 (2-44)||(16492556-16492598)
chr7 (2-44)||(16671298-16671340)
chr7 (2-44)||(17645666-17645708)
chr7 (2-44)||(40450112-40450154)
chr7 (2-44)||(48641453-48641495)
chr7 (1-42)||(34837242-34837283)
chr7 (1-44)||(2354675-2354718)
chr7 (1-44)||(4681155-4681198)
chr7 (2-41)||(4681609-4681648)
chr7 (6-44)||(9142148-9142186)
chr7 (2-36)||(34837501-34837535)
chr7 (2-44)||(48641027-48641069)
chr7 (5-42)||(21224192-21224229)
[»] chr8 (23 HSPs)
chr8 (1-44)||(35617734-35617777)
chr8 (1-44)||(39922099-39922142)
chr8 (2-46)||(30439054-30439098)
chr8 (1-44)||(23828138-23828181)
chr8 (1-44)||(40399505-40399548)
chr8 (2-44)||(23830957-23830999)
chr8 (2-44)||(32062869-32062911)
chr8 (2-44)||(37410084-37410126)
chr8 (2-41)||(1276535-1276574)
chr8 (1-44)||(13797494-13797537)
chr8 (1-44)||(23085912-23085955)
chr8 (1-44)||(23960811-23960854)
chr8 (1-36)||(27853681-27853716)
chr8 (1-36)||(37197917-37197952)
chr8 (1-44)||(37198124-37198167)
chr8 (1-44)||(38111396-38111439)
chr8 (2-44)||(1197930-1197972)
chr8 (2-44)||(3459147-3459189)
chr8 (2-44)||(23838354-23838396)
chr8 (6-44)||(29580054-29580092)
chr8 (2-44)||(34947528-34947570)
chr8 (3-44)||(18308258-18308299)
chr8 (2-36)||(23960594-23960628)
[»] chr4 (37 HSPs)
chr4 (1-44)||(28379983-28380026)
chr4 (1-95)||(12796131-12796226)
chr4 (1-44)||(22292950-22292993)
chr4 (1-44)||(23952791-23952834)
chr4 (1-44)||(48076242-48076285)
chr4 (2-44)||(4941730-4941772)
chr4 (2-44)||(8118433-8118475)
chr4 (2-44)||(21581288-21581330)
chr4 (2-44)||(36639224-36639266)
chr4 (2-44)||(48076420-48076462)
chr4 (3-44)||(22292743-22292784)
chr4 (1-41)||(47631593-47631633)
chr4 (1-36)||(8079355-8079390)
chr4 (2-41)||(8397754-8397793)
chr4 (1-44)||(23952515-23952558)
chr4 (5-44)||(28379776-28379815)
chr4 (1-44)||(28389782-28389825)
chr4 (1-44)||(29967231-29967274)
chr4 (1-44)||(43161936-43161979)
chr4 (1-44)||(44500724-44500767)
chr4 (1-44)||(54653660-54653703)
chr4 (2-44)||(2177316-2177358)
chr4 (2-44)||(8118649-8118691)
chr4 (2-44)||(21585568-21585610)
chr4 (2-44)||(24049617-24049659)
chr4 (2-44)||(43161752-43161794)
chr4 (2-44)||(47769004-47769046)
chr4 (2-44)||(52689630-52689672)
chr4 (2-44)||(53144857-53144899)
chr4 (2-47)||(36639394-36639439)
chr4 (1-42)||(48076599-48076640)
chr4 (2-42)||(24049337-24049377)
chr4 (2-95)||(28813225-28813318)
chr4 (2-42)||(47631414-47631454)
chr4 (2-33)||(41852157-41852188)
chr4 (2-44)||(7796837-7796879)
chr4 (2-44)||(7809400-7809442)
[»] chr6 (17 HSPs)
chr6 (2-44)||(17201649-17201691)
chr6 (1-44)||(9828971-9829014)
chr6 (1-44)||(27579650-27579693)
chr6 (2-44)||(23622270-23622312)
chr6 (1-42)||(27315340-27315381)
chr6 (4-44)||(25068240-25068280)
chr6 (1-44)||(17202683-17202726)
chr6 (1-44)||(17906811-17906854)
chr6 (2-44)||(808882-808924)
chr6 (1-43)||(17202903-17202945)
chr6 (1-95)||(32208418-32208513)
chr6 (1-41)||(4811073-4811113)
chr6 (2-42)||(26832528-26832568)
chr6 (1-36)||(15130959-15130994)
chr6 (1-44)||(23610485-23610527)
chr6 (2-44)||(25068014-25068056)
chr6 (1-42)||(4100325-4100366)
[»] chr3 (27 HSPs)
chr3 (1-47)||(46451519-46451565)
chr3 (2-47)||(11453987-11454032)
chr3 (1-44)||(837214-837257)
chr3 (1-44)||(36643138-36643181)
chr3 (1-44)||(38887589-38887632)
chr3 (2-44)||(35560154-35560196)
chr3 (2-44)||(37760549-37760591)
chr3 (2-44)||(38887377-38887419)
chr3 (2-44)||(47503238-47503280)
chr3 (2-44)||(51654096-51654138)
chr3 (2-46)||(11522582-11522626)
chr3 (1-44)||(11454615-11454658)
chr3 (3-42)||(18094795-18094834)
chr3 (1-44)||(18095008-18095051)
chr3 (1-44)||(38887806-38887849)
chr3 (1-44)||(40050902-40050945)
chr3 (2-44)||(24365786-24365828)
chr3 (2-44)||(43017323-43017365)
chr3 (2-44)||(46451335-46451377)
chr3 (2-44)||(47503065-47503107)
chr3 (2-44)||(53047599-53047641)
chr3 (4-41)||(54274787-54274824)
chr3 (4-44)||(11454435-11454475)
chr3 (1-44)||(16015261-16015304)
chr3 (2-44)||(850984-851026)
chr3 (2-36)||(11454265-11454299)
chr3 (7-44)||(47519978-47520015)
[»] chr1 (36 HSPs)
chr1 (1-47)||(44263138-44263184)
chr1 (2-95)||(16165698-16165792)
chr1 (1-44)||(318607-318650)
chr1 (1-44)||(1156076-1156119)
chr1 (1-44)||(3227234-3227277)
chr1 (1-44)||(42492176-42492219)
chr1 (1-44)||(42496944-42496987)
chr1 (1-44)||(51114142-51114185)
chr1 (2-44)||(5428580-5428622)
chr1 (2-44)||(21617808-21617850)
chr1 (2-44)||(42497303-42497345)
chr1 (2-44)||(45417612-45417654)
chr1 (1-47)||(51113955-51114001)
chr1 (1-36)||(5429112-5429147)
chr1 (1-36)||(6537666-6537701)
chr1 (1-44)||(38684067-38684110)
chr1 (1-44)||(44262716-44262759)
chr1 (1-44)||(51272503-51272546)
chr1 (2-44)||(1647595-1647637)
chr1 (2-44)||(4100597-4100639)
chr1 (2-36)||(27296397-27296431)
chr1 (2-44)||(44099682-44099724)
chr1 (2-44)||(44263362-44263404)
chr1 (2-44)||(51113775-51113817)
chr1 (3-44)||(24595280-24595321)
chr1 (1-42)||(27296216-27296257)
chr1 (2-43)||(28949904-28949945)
chr1 (2-42)||(12115359-12115399)
chr1 (1-36)||(5428993-5429028)
chr1 (5-36)||(33375690-33375721)
chr1 (1-44)||(52740752-52740795)
chr1 (2-44)||(4100804-4100846)
chr1 (8-42)||(28950277-28950311)
chr1 (2-44)||(42497480-42497522)
chr1 (2-43)||(28950182-28950223)
chr1 (2-42)||(52584988-52585028)
[»] chr2 (21 HSPs)
chr2 (1-46)||(41995764-41995809)
chr2 (1-44)||(28612244-28612287)
chr2 (2-44)||(5001711-5001753)
chr2 (1-44)||(10129508-10129551)
chr2 (1-44)||(12896437-12896480)
chr2 (1-47)||(19640356-19640402)
chr2 (1-47)||(19838949-19838995)
chr2 (2-36)||(28612669-28612703)
chr2 (1-47)||(29550007-29550053)
chr2 (3-44)||(41326421-41326462)
chr2 (8-44)||(5001392-5001428)
chr2 (8-44)||(5013062-5013098)
chr2 (5-44)||(28611823-28611862)
chr2 (1-47)||(28612879-28612926)
chr2 (1-44)||(44543726-44543769)
chr2 (2-36)||(627636-627670)
chr2 (2-44)||(11735961-11736003)
chr2 (2-44)||(11736353-11736395)
chr2 (2-44)||(29549843-29549885)
chr2 (1-31)||(29550202-29550232)
chr2 (8-36)||(28612039-28612067)
[»] scaffold0294 (1 HSPs)
scaffold0294 (4-44)||(12399-12439)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-44)||(14591-14634)
[»] scaffold0240 (2 HSPs)
scaffold0240 (1-44)||(13144-13187)
scaffold0240 (2-44)||(13303-13345)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-44)||(163813-163856)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-44)||(102755-102798)
[»] scaffold0504 (1 HSPs)
scaffold0504 (1-44)||(1544-1587)


Alignment Details
Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 7673230 - 7673275
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7673230 aatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 7673275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 24350930 - 24350972
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24350930 aatttgttaggttaaataattgcaaacctaataaaacaaatga 24350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 24351483 - 24351525
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24351483 aatttgttaggttaaataattgcaaacctaataaaacaaatga 24351525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16526293 - 16526250
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  16526293 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 16526250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16528695 - 16528652
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  16528695 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 16528652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 35159797 - 35159755
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  35159797 aatttgttaggttaaataattgcaaacctaataaagcaaatga 35159755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43394965 - 43395007
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  43394965 aatttgttaggttaaataattgcaaacctaataaagcaaatga 43395007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41092901 - 41092995
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacgnnnnnnnttagactaaattactacatacctaacaaaattaataaataa 95  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||       ||||  ||||||  | || ||||||||||||||||||||||    
T  41092901 gaatttgttaggttaaataattgcaaacctaataaagcaaaagagcggaataaattaggttaaattgatgcagacctaacaaaattaataaataa 41092995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41093080 - 41093121
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  41093080 gaatttgttaggttaaataattgcaaacctaataaagcaaat 41093121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16305441 - 16305348
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacgnnnnnnnttagactaaattactacatacctaacaaaattaataaataa 95  Q
    |||||| |||| |||||||||||||||||||||||| ||||||| ||       ||||  ||||||| |||| ||||||||||||||||||||||    
T  16305441 gaatttattagattaaataattgcaaacctaataaagcaaatgagcg-ggaaaattagtttaaattattacaaacctaacaaaattaataaataa 16305348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11313735 - 11313700
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  11313735 gaatttgttaggttaaataattgcaaacctaataaa 11313700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11313897 - 11313862
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  11313897 gaatttgttaggttaaataattgcaaacctaataaa 11313862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11314075 - 11314032
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  11314075 gaattttttaggttaaataattgcaaacctaataaagcaaatga 11314032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14166193 - 14166236
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  14166193 gaatttgttaggttaaataattgcaaacataataaagcaaatga 14166236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19122002 - 19121959
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  19122002 gaatttgttaggttaaacaattgcaaacctaataaagcaaatga 19121959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19122338 - 19122295
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  19122338 gaatttgttaggttaaacaattgcaaacctaataaagcaaatga 19122295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12442164 - 12442206
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  12442164 aatttgttaggttaaataattgcaaacctaataaggcaaatga 12442206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 16529051 - 16529009
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  16529051 aatttgttaggttaaataattgcaaacctaataaggcaaatga 16529009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35159512 - 35159466
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||    
T  35159512 gaattggttaggttaaataattgcaaacctaataaagcaaaagaacg 35159466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43395142 - 43395184
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  43395142 aatttgttaggttaaataattggaaacctaataaagcaaatga 43395184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 9488081 - 9488126
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  9488081 aatttgttaggttaaataattgcaaatctaataaagcaaataaacg 9488126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7127654 - 7127611
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||| ||||||||||||||||||||| || |||||||    
T  7127654 gaatttgttagtttaaataattgcaaacctaatcaagcaaatga 7127611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16529230 - 16529187
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| |||||||||||||||| |||||||| |||||||    
T  16529230 gaatttgttacgttaaataattgcaaatctaataaagcaaatga 16529187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26523170 - 26523213
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||| | |||||||||||||||||||||| |||||||    
T  26523170 gaatttgttagatcaaataattgcaaacctaataaagcaaatga 26523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 26523268 - 26523307
Alignment:
Q  3 atttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  26523268 atttgttaggtcaaataattgcaaacctaataaagcaaat 26523307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 24326609 - 24326577
Alignment:
Q  12 gttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||| |||||||    
T  24326609 gttaaataattgcaaacctaataaagcaaatga 24326577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 24350732 - 24350764
Alignment:
Q  12 gttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||| |||||||    
T  24350732 gttaaataattgcaaacctaataaagcaaatga 24350764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 24351286 - 24351318
Alignment:
Q  12 gttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||| |||||||    
T  24351286 gttaaataattgcaaacctaataaagcaaatga 24351318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 2853228 - 2853272
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaac 46  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2853228 aatttgttaggttaaataattgcaaacctaataaaacaaatgaac 2853272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35124820 - 35124774
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  35124820 gaatttgttaggttaaataattgcaaacctaataaagcaaatgaacg 35124774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23591641 - 23591685
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaa 45  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  23591641 gaatttgttaggttaaataattgcaaacctaataaagcaaatgaa 23591685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4680906 - 4680949
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  4680906 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 4680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11646407 - 11646450
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  11646407 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 11646450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11650018 - 11650061
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  11650018 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 11650061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16671700 - 16671657
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  16671700 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 16671657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17646068 - 17646025
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  17646068 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 17646025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23591424 - 23591467
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  23591424 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 23591467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27716319 - 27716362
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  27716319 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 27716362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46264293 - 46264336
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  46264293 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 46264336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 9141972 - 9142014
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  9141972 aatttgttaggttaaataattgcaaacctaataaagcaaatga 9142014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 18486728 - 18486686
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  18486728 aatttgttaggttaaataattgcaaacctaataaagcaaatga 18486686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 18487245 - 18487203
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  18487245 aatttgttaggttaaataattgcaaacctaataaagcaaatga 18487203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19222201 - 19222155
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  19222201 gaatttgttaggttaaataattgtaaacctaataaagcaaatgaacg 19222155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 45419647 - 45419689
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  45419647 aatttgttaggttaaataattgcaaacctaataaagcaaatga 45419689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 48640812 - 48640854
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  48640812 aatttgttaggttaaataattgcaaacctaataaagcaaatga 48640854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 1566519 - 1566560
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatg 43  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  1566519 aatttgttaggttaaataattgcaaacctaataaagcaaatg 1566560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 40686903 - 40686943
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  40686903 aatttgttaggttaaataattgcaaacctaataaagcaaat 40686943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11646219 - 11646262
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  11646219 gaatttgttaggttaaataattgcaaacctaacaaagcaaatga 11646262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 27716545 - 27716584
Alignment:
Q  5 ttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  27716545 ttgttaggttaaataattgcaaacctaataaagcaaatga 27716584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30991555 - 30991512
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  30991555 gaatttgttaggttaaataattgcaaacataataaagcaaatga 30991512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43059286 - 43059243
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||| |||||||||||||||||||||||| |||||||    
T  43059286 gaatttgttagattaaataattgcaaacctaataaagcaaatga 43059243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45419852 - 45419895
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  45419852 gaatttgttaggttaaataattacaaacctaataaagcaaatga 45419895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 2526964 - 2527006
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  2526964 aattagttaggttaaataattgcaaacctaataaagcaaatga 2527006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 11645942 - 11645984
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  11645942 aatttgttaggttaaataattacaaacctaataaagcaaatga 11645984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12140872 - 12140914
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  12140872 aatttgttaggttaaataattgcaaacctaataacgcaaatga 12140914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 16362701 - 16362743
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  16362701 aatttgttaggttaaataactgcaaatctaataaaacaaatga 16362743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 16492556 - 16492598
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  16492556 aatttgttaggttaaataattgcaaacataataaagcaaatga 16492598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 16671340 - 16671298
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  16671340 aatttgttaggttaaataattgcaaacctaatagagcaaatga 16671298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 17645708 - 17645666
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  17645708 aatttgttaggttaaataattgcaaacctaatagagcaaatga 17645666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 40450112 - 40450154
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  40450112 aatttgttaggttaaataattgcaaatctaataaagcaaatga 40450154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 48641453 - 48641495
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  48641453 aatttgttaggttaaataattgcaaacttaataaagcaaatga 48641495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34837283 - 34837242
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  34837283 gaatttgttaggttaaataattgtaaacctaataaagcaaat 34837242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2354675 - 2354718
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||  |||||||||||||||||||||||| |||||||    
T  2354675 gaatttgttatattaaataattgcaaacctaataaagcaaatga 2354718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4681155 - 4681198
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||    
T  4681155 gaatttattaggttaaataattgcaaacataataaagcaaatga 4681198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 4681609 - 4681648
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaa 41  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  4681609 aatttgttaagttaaataattgcaaacctaataaagcaaa 4681648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 9142148 - 9142186
Alignment:
Q  6 tgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  9142148 tgttaggttaaataattgcaaaccaaataaagcaaatga 9142186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 34837535 - 34837501
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaa 36  Q
    |||||||||||| ||||||||||||||||||||||    
T  34837535 aatttgttaggtaaaataattgcaaacctaataaa 34837501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 48641027 - 48641069
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||| || |||||||||||||||||||||||||| |||||||    
T  48641027 aatttttttggttaaataattgcaaacctaataaagcaaatga 48641069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 21224229 - 21224192
Alignment:
Q  5 ttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  21224229 ttgttaggttaaataattgtaaacctaataaagcaaat 21224192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35617777 - 35617734
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35617777 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 35617734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39922099 - 39922142
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39922099 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 39922142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 30439054 - 30439098
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaac 46  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  30439054 aatttgttaggttaaataattgcaaacctaataaagcaaatgaac 30439098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23828138 - 23828181
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  23828138 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 23828181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40399505 - 40399548
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  40399505 gaatttgttaggttaaataattacaaacctaataaaacaaatga 40399548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 23830957 - 23830999
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  23830957 aatttgttaggttaaataattgcaaacctaataaagcaaatga 23830999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 32062911 - 32062869
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  32062911 aatttgttaggttaaataattgcaaacctaataaagcaaatga 32062869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 37410084 - 37410126
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  37410084 aatttgttaggttaaataattgcaaacctaataaagcaaatga 37410126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 1276535 - 1276574
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaa 41  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1276535 aatttgttaggttaaataattgcaaacctaataaagcaaa 1276574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13797537 - 13797494
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| ||||||||||||||||||||||||| |||||||    
T  13797537 gaatttgttaagttaaataattgcaaacctaataaagcaaatga 13797494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23085955 - 23085912
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  23085955 gaatttattaggttaaataattgcaaacctaataaagcaaatga 23085912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23960811 - 23960854
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  23960811 gaatttgttaggttaaataattacaaacctaataaagcaaatga 23960854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 27853681 - 27853716
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  27853681 gaatttgttaggttaaataattgcaaacctaataaa 27853716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37197917 - 37197952
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  37197917 gaatttgttaggttaaataattgcaaacctaataaa 37197952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37198124 - 37198167
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  37198124 gaatttattaggttaaataattgcaaacctaataaagcaaatga 37198167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38111439 - 38111396
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  38111439 gaatttgttgggttaaataattgcaaacctaataaagcaaatga 38111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 1197972 - 1197930
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  1197972 aatttgttaggttaaataattgcaaccctaataaagcaaatga 1197930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 3459147 - 3459189
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| |||||||||||||||||||||||| |||||||    
T  3459147 aatttgttagattaaataattgcaaacctaataaagcaaatga 3459189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 23838354 - 23838396
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  23838354 aatttgttaggttaaataattgcaaaactaataaagcaaatga 23838396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 29580054 - 29580092
Alignment:
Q  6 tgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  29580054 tgttagtttaaataattgcaaacctaataaaacaaatga 29580092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 34947570 - 34947528
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  34947570 aatttgttaggttaaataatttcaaacctaataaagcaaatga 34947528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 18308258 - 18308299
Alignment:
Q  3 atttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  18308258 atttgttaggttaaataattgcgaacctaataaagcaaatga 18308299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 23960594 - 23960628
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaa 36  Q
    |||||||||||||||||||||| ||||||||||||    
T  23960594 aatttgttaggttaaataattgtaaacctaataaa 23960628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28379983 - 28380026
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28379983 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 28380026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12796131 - 12796226
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaac-gnnnnnnnttagactaaattactacatacctaacaaaattaataaataa 95  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |       ||||  |||||| |||||||||||| |||||||||||||||    
T  12796131 gaatttgttagattaaataattgcaaacctaataaaacaaatgagcggaaaaaaattaggttaaattgctacatacctaataaaattaataaataa 12796226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22292993 - 22292950
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  22292993 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 22292950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23952791 - 23952834
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  23952791 gaatttgttaagttaaataattgcaaacctaataaaacaaatga 23952834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48076285 - 48076242
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  48076285 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 48076242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 4941772 - 4941730
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  4941772 aatttgttaggttaaataattgcaaacctaataaagcaaatga 4941730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 8118475 - 8118433
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  8118475 aatttgttaggttaaataattgcaaacctaataaagcaaatga 8118433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 21581288 - 21581330
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  21581288 aatttgttaggttaaataattgcaaacctaataaagcaaatga 21581330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 36639266 - 36639224
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  36639266 aatttgttaggttaaataattgcaaacctaataaagcaaatga 36639224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 48076462 - 48076420
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  48076462 aatttgttaggttaaataattgcaaacctaataaagcaaatga 48076420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 22292784 - 22292743
Alignment:
Q  3 atttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  22292784 atttgttaggttaaataattgcaaacctaataaagcaaatga 22292743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47631633 - 47631593
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaa 41  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  47631633 gaatttgttaggttaaataattgcaaacctaataaagcaaa 47631593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8079390 - 8079355
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  8079390 gaatttgttaggttaaataattgcaaacctaataaa 8079355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 8397754 - 8397793
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaa 41  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  8397754 aatttgttaagttaaataattgcaaacctaataaaacaaa 8397793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23952515 - 23952558
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  23952515 gaattttttaggttaaataattgcaaacctaataaagcaaatga 23952558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 28379776 - 28379815
Alignment:
Q  5 ttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  28379776 ttgttaggttaaataattgcaaacctaataaagcaaatga 28379815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28389782 - 28389825
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  28389782 gaatttgttaggttaaataaatgcaaacctaataaagcaaatga 28389825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29967274 - 29967231
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||    
T  29967274 gaatttgttaggttatataattgcaaatctaataaaacaaatga 29967231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43161936 - 43161979
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| ||||||||||||||||||||||||| |||||||    
T  43161936 gaatttgttaagttaaataattgcaaacctaataaagcaaatga 43161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44500767 - 44500724
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| ||||||||||||||||||||||||| |||||||    
T  44500767 gaatttgttacgttaaataattgcaaacctaataaagcaaatga 44500724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54653660 - 54653703
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  54653660 gaatttgttaggttaaataactgcaaacctaataaagcaaatga 54653703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 2177358 - 2177316
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  2177358 aatttgttaggttaagtaattgcaaacctaataaagcaaatga 2177316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 8118691 - 8118649
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  8118691 aatttgttaggttaaataattgcaaccctaataaagcaaatga 8118649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 21585568 - 21585610
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||| ||||||||||||||||||||||||| |||||||    
T  21585568 aatttgttaagttaaataattgcaaacctaataaagcaaatga 21585610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 24049659 - 24049617
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  24049659 aattcgttaggttaaataattgcaaacctaataaagcaaatga 24049617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43161752 - 43161794
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  43161752 aatttgttaggttaaataattgcaaacctaataatgcaaatga 43161794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 47769046 - 47769004
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  47769046 aatttgttaggttaaataattgcaaacctaatgaagcaaatga 47769004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 52689630 - 52689672
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  52689630 aatttgttaggttaaataattacaaacctaataaagcaaatga 52689672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 53144857 - 53144899
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  53144857 aatttgttaggttaaataattacaaacctaataaagcaaatga 53144899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36639439 - 36639394
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||    
T  36639439 aatttgttaggttaaataattgcaatcctaataaagaaaatgaacg 36639394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48076640 - 48076599
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  48076640 gaatttgttaggttaaataattgtaaacctaataaagcaaat 48076599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 24049377 - 24049337
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  24049377 aatttgtcaggttaaataattgcaaacctaataaagcaaat 24049337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 28813318 - 28813225
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaacgnnnnnnnttagactaaattactacatacctaacaaaattaataaataa 95  Q
    |||||||| |||||||||||| ||||||||||||| ||||||| ||       ||||| ||||||  |  | ||||||||||||||||||||||    
T  28813318 aatttgtttggttaaataattacaaacctaataaagcaaatgagcggaaaaaattagattaaattgttgtaaacctaacaaaattaataaataa 28813225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 47631454 - 47631414
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  47631454 aatttgttaggttaaataattgcaaacctaacaaagcaaat 47631414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 41852157 - 41852188
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaat 33  Q
    ||||||||||||||||||||||||||||||||    
T  41852157 aatttgttaggttaaataattgcaaacctaat 41852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 7796879 - 7796837
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||    
T  7796879 aatttgttaggttaaataattacaatcctaataaagcaaatga 7796837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 7809442 - 7809400
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||    
T  7809442 aattttttaggttaaataattacaaacctaataaagcaaatga 7809400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 17201691 - 17201649
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17201691 aatttgttaggttaaataattgcaaacctaataaaacaaatga 17201649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9829014 - 9828971
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  9829014 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 9828971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27579693 - 27579650
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  27579693 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 27579650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 23622312 - 23622270
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  23622312 aatttgttaggttaaataattgcaaacctaataaagcaaatga 23622270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27315381 - 27315340
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  27315381 gaatttgttaggttaaataattgcaaacctaataaagcaaat 27315340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 25068280 - 25068240
Alignment:
Q  4 tttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  25068280 tttgttaggttaaataattgcaaacctaataaagcaaatga 25068240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17202726 - 17202683
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||| |||||||||||||||||||||||| |||||||    
T  17202726 gaatttgttagattaaataattgcaaacctaataaagcaaatga 17202683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17906811 - 17906854
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  17906811 gaatttgttaggttaaataattacaaacctaataaagcaaatga 17906854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 808924 - 808882
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  808924 aatttgtttggttaaataattgcaaacctaataaagcaaatga 808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17202945 - 17202903
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatg 43  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  17202945 gaatttgttaggttaaataattgcaaatctaataaagcaaatg 17202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32208418 - 32208513
Alignment:
Q  1 gaatttgttaggttaaa-taattgcaaacctaataaaacaaatgaacgnnnnnnnttagactaaattactacatacctaacaaaattaataaataa 95  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||       ||||| ||||||  | || ||||| ||||||||||||||||    
T  32208418 gaatttgttaggttaaaataattgcaaacctaataaagcaaatgagcggaaaaaattagattaaattgttgcagacctagcaaaattaataaataa 32208513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4811073 - 4811113
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaa 41  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  4811073 gaattagttaggttaaataattgcaaacctaataaagcaaa 4811113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 26832528 - 26832568
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  26832528 aatttgttaagttaaataattgcaaacctaataaagcaaat 26832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 15130994 - 15130959
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||| ||||||||    
T  15130994 gaatttgttaggttaaataattgcaaatctaataaa 15130959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23610527 - 23610485
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  23610527 gaatttgttaggttaaataattg-aaacctaataaagcaaatga 23610485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 25068056 - 25068014
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||    
T  25068056 aatttgttatgttaaataattgcaaaccttataaagcaaatga 25068014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4100325 - 4100366
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||| |||||||||||||||| ||||||| |||||    
T  4100325 gaatttgttagcttaaataattgcaaacataataaagcaaat 4100366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46451565 - 46451519
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  46451565 gaatttgttaggttaaataattgcaaacctaataaagcaaatgaacg 46451519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 11454032 - 11453987
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11454032 aatttgttaggttaaataattgcaaacctaataaagcaaatgaacg 11453987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 837214 - 837257
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  837214 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 837257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36643138 - 36643181
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  36643138 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 36643181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38887589 - 38887632
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  38887589 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 38887632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 35560196 - 35560154
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  35560196 aatttgttaggttaaataattgcaaacctaataaagcaaatga 35560154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 37760591 - 37760549
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  37760591 aatttgttaggttaaataattgcaaacctaataaagcaaatga 37760549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 38887377 - 38887419
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  38887377 aatttgttaggttaaataattgcaaacctaataaagcaaatga 38887419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 47503238 - 47503280
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  47503238 aatttgttaggttaaataattgcaaacctaataaagcaaatga 47503280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 51654138 - 51654096
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  51654138 aatttgttaggttaaataattgtaaacctaataaaacaaatga 51654096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 11522626 - 11522582
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaac 46  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  11522626 aatttgttaggttaaacaattgtaaacctaataaaacaaatgaac 11522582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11454658 - 11454615
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  11454658 gaatttgttaggttaaatgattgcaaacctaataaagcaaatga 11454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 18094834 - 18094795
Alignment:
Q  3 atttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18094834 atttgttaggttaaataattgcaaacctaataaagcaaat 18094795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18095051 - 18095008
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  18095051 gaatttgttaggttaaatcattgcaaacctaataaagcaaatga 18095008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38887806 - 38887849
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| ||||||||||||||||||||||||| |||||||    
T  38887806 gaatttgttacgttaaataattgcaaacctaataaagcaaatga 38887849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40050945 - 40050902
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  40050945 gaatttgttaggttaaattattgcaaacctaataaagcaaatga 40050902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 24365828 - 24365786
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  24365828 aattcgttaggttaaataattgcaaacctaataaatcaaatga 24365786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 43017365 - 43017323
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  43017365 aatttgttaggttaaataattgcaaacttaataaagcaaatga 43017323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 46451377 - 46451335
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  46451377 aatttgttaggttaaataattgcaaatctaataaagcaaatga 46451335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 47503065 - 47503107
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  47503065 aatttgttaggttaaataattgcaaacctaataatgcaaatga 47503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 53047599 - 53047641
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  53047599 aatttgttaggttaaataattgcaaacctaacaaagcaaatga 53047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 54274824 - 54274787
Alignment:
Q  4 tttgttaggttaaataattgcaaacctaataaaacaaa 41  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54274824 tttgttaggttaaataattgcaaacctaataaagcaaa 54274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 11454475 - 11454435
Alignment:
Q  4 tttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  11454475 tttgttaggttaaataattgcaagcctaataaagcaaatga 11454435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16015261 - 16015304
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||  ||||||||||| |||||||    
T  16015261 gaatttgttaggttaaataattgttaacctaataaagcaaatga 16015304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 851026 - 850984
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||  ||||||||||||||||||||||||| ||||||    
T  851026 aatttgttaacttaaataattgcaaacctaataaaataaatga 850984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 11454299 - 11454265
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaa 36  Q
    |||||||||||||||||||||||||||| ||||||    
T  11454299 aatttgttaggttaaataattgcaaaccaaataaa 11454265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 47520015 - 47519978
Alignment:
Q  7 gttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  47520015 gttaggttaaataattgcaaccctaataaagcaaatga 47519978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44263184 - 44263138
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  44263184 gaatttgttaggttaaataattgcaaacctaataaagcaaatgaacg 44263138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 16165698 - 16165792
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatgaac-gnnnnnnnttagactaaattactacatacctaacaaaattaataaataa 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |       ||||  |||||| ||||| ||||||||||||||||||||||    
T  16165698 aatttgttaggttaaataattgcaaacctaataaagcaaatgatcgggaaaaaattaggttaaattgctacagacctaacaaaattaataaataa 16165792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 318650 - 318607
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  318650 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 318607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1156076 - 1156119
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  1156076 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 1156119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3227234 - 3227277
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  3227234 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 3227277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42492176 - 42492219
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  42492176 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 42492219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42496944 - 42496987
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  42496944 gaatttgttaggttaaataattgcaaatctaataaaacaaatga 42496987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51114185 - 51114142
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  51114185 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 51114142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 5428622 - 5428580
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  5428622 aatttgttaggttaaataattgcaaacctaataaagcaaatga 5428580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 21617850 - 21617808
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  21617850 aatttgttaggttaaataattgcaaacctaataaagcaaatga 21617808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 42497303 - 42497345
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  42497303 aatttgttaggttaaataattgcaaacctaataaagcaaatga 42497345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 45417612 - 45417654
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  45417612 aatttgttaggttaaataattgcaaacctaataaagcaaatga 45417654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51114001 - 51113955
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  51114001 gaatttgttaggttaaataattgcaaacctaataaagtaaatgaacg 51113955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5429147 - 5429112
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  5429147 gaatttgttaggttaaataattgcaaacctaataaa 5429112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6537666 - 6537701
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  6537666 gaatttgttaggttaaataattgcaaacctaataaa 6537701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38684110 - 38684067
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  38684110 gaatttgttaggttaaataatcgcaaacctaataaagcaaatga 38684067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44262759 - 44262716
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  44262759 gaatttgttaggttaaataattgcaaacgtaataaagcaaatga 44262716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51272503 - 51272546
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  51272503 gaatttattaggttaaataattgcaaacctaataaagcaaatga 51272546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 1647637 - 1647595
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  1647637 aatttgttaggttaaataattccaaacctaataaagcaaatga 1647595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 4100597 - 4100639
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  4100597 aatttgttaagttaaataattgcaaacttaataaaacaaatga 4100639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 27296431 - 27296397
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaa 36  Q
    |||||||||||||||||||||||||||||||||||    
T  27296431 aatttgttaggttaaataattgcaaacctaataaa 27296397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 44099682 - 44099724
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  44099682 aatttattaggttaaataattgcaaacctaataaagcaaatga 44099724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 44263404 - 44263362
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  44263404 aatttgttaggttaaataattgcaaacctaataaggcaaatga 44263362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 51113817 - 51113775
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  51113817 aatttgttaggttaaataattgcaaatctaataaagcaaatga 51113775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24595321 - 24595280
Alignment:
Q  3 atttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  24595321 attttttaggttaaataattgcaaacctaataaagcaaatga 24595280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27296257 - 27296216
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  27296257 gaatttattaggttaaataattgcaaacctaataaagcaaat 27296216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 28949904 - 28949945
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatg 43  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  28949904 aatttgttaggttaaataattacaaacctaataaagcaaatg 28949945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 12115399 - 12115359
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  12115399 aatttgttaggttaaataattccaaacctaataaagcaaat 12115359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 5429028 - 5428993
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5429028 gaatttgttagcttaaataattgcaaacctaataaa 5428993  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 36
Target Start/End: Complemental strand, 33375721 - 33375690
Alignment:
Q  5 ttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||||||||    
T  33375721 ttgttaggttaaataattgcaaacctaataaa 33375690  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52740795 - 52740752
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||| |||||||||||| |||||||||||| |||||||    
T  52740795 gaatttgttaagttaaataattgtaaacctaataaagcaaatga 52740752  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 4100804 - 4100846
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||| |||||||||||||||||||| |||||||||| |||||    
T  4100804 aattttttaggttaaataattgcaaatctaataaaactaatga 4100846  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 28950277 - 28950311
Alignment:
Q  8 ttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||||||||||| |||||    
T  28950277 ttaggttaaataattgcaaacctaataaagcaaat 28950311  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 42497480 - 42497522
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||    
T  42497480 aatttgttaagttaaataattacaaacctaataaaataaatga 42497522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 28950182 - 28950223
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatg 43  Q
    ||||||||||||||||||||| |||| |||||||| ||||||    
T  28950182 aatttgttaggttaaataatttcaaatctaataaagcaaatg 28950223  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 52585028 - 52584988
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaat 42  Q
    ||||||||||||||||||||| ||||| ||||||| |||||    
T  52585028 aatttgttaggttaaataattacaaacttaataaagcaaat 52584988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41995764 - 41995809
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaac 46  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  41995764 gaatttgttaggttaaataattgcaaacctaataaagcaaatgaac 41995809  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28612244 - 28612287
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  28612244 gaatttgttaggttaaataattgcaaacctaataaagcaaatga 28612287  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 5001711 - 5001753
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  5001711 aatttgttaggttaaataattgcaaacctaataaagcaaatga 5001753  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10129508 - 10129551
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  10129508 gaatttattaggttaaataattgcaaacctaataaagcaaatga 10129551  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12896437 - 12896480
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| |||| ||||||||||||||||||||||||||||||||    
T  12896437 gaatttattagattaaataattgcaaacctaataaaacaaatga 12896480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19640402 - 19640356
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  19640402 gaatttattaggttaaataattgcaaacccaataaaataaatgaacg 19640356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19838995 - 19838949
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||    
T  19838995 gaatttattaggttaaataattgcaaacccaataaaataaatgaacg 19838949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 28612669 - 28612703
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaa 36  Q
    |||||||||||||||||||||||||||||||||||    
T  28612669 aatttgttaggttaaataattgcaaacctaataaa 28612703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29550053 - 29550007
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatgaacg 47  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  29550053 gaatttgttaggttaaataataacaaacctaataaagcaaatgaacg 29550007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 41326462 - 41326421
Alignment:
Q  3 atttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  41326462 atttattaggttaaataattgcaaacttaataaaacaaatga 41326421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 5001392 - 5001428
Alignment:
Q  8 ttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||| |||||||    
T  5001392 ttaggttaaataattgcaaacctaataaagcaaatga 5001428  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 5013062 - 5013098
Alignment:
Q  8 ttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||| |||||||    
T  5013062 ttaggttaaataattgcaaacctaataaagcaaatga 5013098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 28611823 - 28611862
Alignment:
Q  5 ttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  28611823 ttgttaggttaaataattgcaaacctaatcaagcaaatga 28611862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28612879 - 28612926
Alignment:
Q  1 gaatttgttaggttaaataattgcaaa-cctaataaaacaaatgaacg 47  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  28612879 gaatttgttagattaaataattgaaaaacctaataaaacaaatgaacg 28612926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44543726 - 44543769
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| |||||||||||||||||||||| |||||| |||||||    
T  44543726 gaattttttaggttaaataattgcaaaccaaataaagcaaatga 44543769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 627670 - 627636
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaa 36  Q
    ||||||||||||||||||||||||||| |||||||    
T  627670 aatttgttaggttaaataattgcaaacgtaataaa 627636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 11736003 - 11735961
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||| || || |||||||    
T  11736003 aatttgttaggttaaataattgcaaaccttatgaagcaaatga 11735961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 11736395 - 11736353
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||||| || || |||||||    
T  11736395 aatttgttaggttaaataattgcaaaccttatgaagcaaatga 11736353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 29549885 - 29549843
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||| |||||||||||||||| |||||||||||| |||||||    
T  29549885 aatttattaggttaaataattgtaaacctaataaagcaaatga 29549843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 29550232 - 29550202
Alignment:
Q  1 gaatttgttaggttaaataattgcaaaccta 31  Q
    |||||||||||||||||||||||||||||||    
T  29550232 gaatttgttaggttaaataattgcaaaccta 29550202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 28612039 - 28612067
Alignment:
Q  8 ttaggttaaataattgcaaacctaataaa 36  Q
    |||||||||||||||||||||||||||||    
T  28612039 ttaggttaaataattgcaaacctaataaa 28612067  T

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Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12399 - 12439
Alignment:
Q  4 tttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12399 tttgttaggttaaataattgcaaacctaataaaacaaatga 12439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14591 - 14634
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  14591 gaatttgttaggttaaataattgcaaatctaataaaacaaatga 14634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13187 - 13144
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||| |||||||||||||| |||||||    
T  13187 gaatttgttaggttaaataatggcaaacctaataaaccaaatga 13144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 13345 - 13303
Alignment:
Q  2 aatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  13345 aatttgttaggttaaataattgcaaccctaataaagcaaatga 13303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 163813 - 163856
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  163813 gaatttattaggttaaataattgcaaacctaataaagcaaatga 163856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 102798 - 102755
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  102798 gaatttgttaggttaaataattgcaaacttaataaagcaaatga 102755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1544 - 1587
Alignment:
Q  1 gaatttgttaggttaaataattgcaaacctaataaaacaaatga 44  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||    
T  1544 gaatttattaggttaaataattgcaaacttaataaagcaaatga 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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