View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16575_low_21 (Length: 329)
Name: NF16575_low_21
Description: NF16575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16575_low_21 |
 | |
|
| [»] chr6 (5 HSPs) |
| |
|
| [»] scaffold0692 (1 HSPs) |
| |
|
| [»] chr2 (1 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 12932787 - 12932459
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatctacgccaaaatatat |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||| ||| |||| |
|
|
| T |
12932787 |
ccaaagctatacatgtcaccacatgtggaaacttctgaacccatcccatactctaaaacatgcaacaaacggtattatatataactatgccgaaacatat |
12932688 |
T |
|
| Q |
101 |
gaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttatt |
200 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
12932687 |
gaagattgaaaaaaacaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttactccgattgtgctagtattcttatt |
12932588 |
T |
|
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12932587 |
agaggtaccggaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatca |
12932488 |
T |
|
| Q |
301 |
caatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
||||| ||||||||||||||||||||||| |
|
|
| T |
12932487 |
caatgaaggattaactgctcacattctcg |
12932459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 12907698 - 12907370
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatctacgccaaaatatat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||| ||| |||| |
|
|
| T |
12907698 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccaccccatactctaaaatatgtaacaaaaggtattatatatcactacgccgaaacatat |
12907599 |
T |
|
| Q |
101 |
gaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttatt |
200 |
Q |
| |
|
||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12907598 |
gaagattcaaaaaaacaatggaagattaaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgattatgctagtattcttatg |
12907499 |
T |
|
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12907498 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcaaatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatca |
12907399 |
T |
|
| Q |
301 |
caatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
12907398 |
caatggaggattaactgctcacattctcg |
12907370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 12958586 - 12958258
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatctacgccaaaatatat |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||| |
|
|
| T |
12958586 |
ccaaagctatacatgtcaccacatgtggatacttctgaacccatcccatactctaaaacatgtaacaaaaggtattatatataactacgccgaaacatat |
12958487 |
T |
|
| Q |
101 |
gaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttatt |
200 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
12958486 |
gaagattcaaaaaaacaatggaagattcaagaatttaaaacatacccggaggagcataaccaactgttccttttattccaattgtgctagtattcttatt |
12958387 |
T |
|
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| |
|
|
| T |
12958386 |
agaggtaccggaaatggttgagacaagtcttgctattccaaaatcactcacatgagcaaccatgtcaccatcaagaaggacattgcttggctttagatca |
12958287 |
T |
|
| Q |
301 |
caatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
|| || ||||||||||||||||||||||| |
|
|
| T |
12958286 |
cagtgaaggattaactgctcacattctcg |
12958258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 12900078 - 12899750
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatctacgccaaaatatat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||| |||| |
|
|
| T |
12900078 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaatatgtaacaaaaggtattatatataactacgccgaaacatat |
12899979 |
T |
|
| Q |
101 |
gaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttatt |
200 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
12899978 |
gaagattcaaaaaaacaatggaagattcaagaatttaaaacatacccggaggagcataaccaactgttccttttattccaattgtgctagtattcttatg |
12899879 |
T |
|
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |
|
|
| T |
12899878 |
agaggtaccagaaattgttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttatatca |
12899779 |
T |
|
| Q |
301 |
caatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
||||| | || ||| |||||||||||||| |
|
|
| T |
12899778 |
caatgaaagactaattgctcacattctcg |
12899750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 12949141 - 12948828
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatctacgccaaaatatat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| | ||| | |
|
|
| T |
12949141 |
ccaaagctatacatgtcaccacaagtggatacttccgaacccatcccatactctaaaacatgtaacaaaaggtattaaatataac--------aat---t |
12949053 |
T |
|
| Q |
101 |
gaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttatt |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||| |
|
|
| T |
12949052 |
aaagaattaaaaaaacaatggaagattcaagaatgtaaaacgtacccggtggagcataaccaactgttccttttattccaattgtactagtattcttatt |
12948953 |
T |
|
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12948952 |
agaggtactggaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatca |
12948853 |
T |
|
| Q |
301 |
caatggaggattaactgctcacatt |
325 |
Q |
| |
|
||||| |||| ||| |||||||||| |
|
|
| T |
12948852 |
caatgaaggactaattgctcacatt |
12948828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 7801 - 7473
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatctacgccaaaatatat |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||| |
|
|
| T |
7801 |
ccaaagctatacatgtcaccacatgtggatacttcttaacccatcccatactctaaaacatgtaacaaatggtattatatataactacgccgaaacatat |
7702 |
T |
|
| Q |
101 |
gaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttatt |
200 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7701 |
gaagattcaaaaaaacaatggaagattcaagaatttaaaacatacccggtggagcataaccagctgttccttttattccgattgtgctagtattcttatt |
7602 |
T |
|
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
7601 |
agacgtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatca |
7502 |
T |
|
| Q |
301 |
caatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
||||| || ||||| |||||||||||||| |
|
|
| T |
7501 |
caatgaagtattaattgctcacattctcg |
7473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 17923098 - 17923432
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaacggtattatatatatct-acgcc-----aaa |
94 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| | | | ||| |
|
|
| T |
17923098 |
ccaaagctatacatgtcaccataagtggatacttctgaacccatcccatactctaaaatatgtaacaaaatgtgttatatatatatgaagaattaaaaaa |
17923197 |
T |
|
| Q |
95 |
atatatgaagaattnnnnnnncaatggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtatt |
194 |
Q |
| |
|
| |||||||||||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
17923198 |
aaatatgaagaattaaaaaaacaaagcaagattcaagaatttaaaacatacccgatggagcataaccaactgttccttttattccgatcgtactagtatt |
17923297 |
T |
|
| Q |
195 |
cttattagaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttta |
294 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17923298 |
cttattagaggtaccggaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttt |
17923397 |
T |
|
| Q |
295 |
agatcacaatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17923398 |
agatcacaatgaaggattaactgctcacattctcg |
17923432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 35)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 121 - 327
Target Start/End: Complemental strand, 10605140 - 10604934
Alignment:
| Q |
121 |
gaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttg |
220 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||| || || || |||||||| ||| |||||||||| ||||| | |
|
|
| T |
10605140 |
gaagattcaagaatttagaacatacctggaggagcatatccaacagttccttttatcccaattgtactagtatttatatgagaggtaccaccaatggacg |
10605041 |
T |
|
| Q |
221 |
agacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctc |
320 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||| | || ||| ||||| |
|
|
| T |
10605040 |
agaccagtcttgctatgccaaaatcactcacatgagcaaccatatcatcatcaagtaggacattgcttggctttagatcacaatgaatgactaattgctc |
10604941 |
T |
|
| Q |
321 |
acattct |
327 |
Q |
| |
|
||||||| |
|
|
| T |
10604940 |
acattct |
10604934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 142 - 327
Target Start/End: Original strand, 10740541 - 10740726
Alignment:
| Q |
142 |
atacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtcttgctatgccaa |
241 |
Q |
| |
|
||||| || |||||||| ||||| |||||||||||||| || || ||||| | ||| | ||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
10740541 |
atacctggaggagcatagccaacagttccttttattccaattgtactagtttccttgtgagaggtatcgtcaatggctgagacaagtcttgctatgccaa |
10740640 |
T |
|
| Q |
242 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattct |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| || || ||||||||| |
|
|
| T |
10740641 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgttcacattct |
10740726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 126 - 326
Target Start/End: Complemental strand, 10612093 - 10611893
Alignment:
| Q |
126 |
ttcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagaca |
225 |
Q |
| |
|
|||| ||||||| |||||||| || |||||||| ||||| || ||||| ||||| || || |||||||||||| ||||| |||| ||||| |||||| |
|
|
| T |
10612093 |
ttcatgaatttagaacatacctggaggagcatagccaacagtccctttaattccaattgtcttagtattcttatgagaggaaccaccaatggccgagaca |
10611994 |
T |
|
| Q |
226 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacatt |
325 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| || | ||||||||| |||| || |||||||||| |
|
|
| T |
10611993 |
agtcttgctatgccaaaatcactcacatgtgcaaccatatcatcatcaagtaggacattgcttggctttatatcacaatgaaggaccaattgctcacatt |
10611894 |
T |
|
| Q |
326 |
c |
326 |
Q |
| |
|
| |
|
|
| T |
10611893 |
c |
10611893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 329
Target Start/End: Original strand, 10762975 - 10763162
Alignment:
| Q |
142 |
atacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatgg-ttgagacaagtcttgctatgcca |
240 |
Q |
| |
|
||||| || |||||||| ||||| |||||||||||||| | || ||||| | |||| |||||||| || ||||| |||| || ||||||||||| ||| |
|
|
| T |
10762975 |
atacctggaggagcatagccaacagttccttttattccagttgtactagtttccttaagagaggtacaagcaatggcttga-actagtcttgctattcca |
10763073 |
T |
|
| Q |
241 |
aaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcacattctcg |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| || |||||||||||||| |
|
|
| T |
10763074 |
aaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcg |
10763162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 120 - 305
Target Start/End: Complemental strand, 10565416 - 10565231
Alignment:
| Q |
120 |
ggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggtt |
219 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||| ||| || ||||||||||| | | | || || || ||||| |||| |||||||| ||| | | |
|
|
| T |
10565416 |
ggaagattcaagcatttaaaacataccaggaggagaatagcctactgttcctttaacttcaattgtacttgtatttttataagaggtactgccaatagct |
10565317 |
T |
|
| Q |
220 |
gagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||| |
|
|
| T |
10565316 |
gagacgagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggatattgcttggctttagatcacaatg |
10565231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 118 - 329
Target Start/End: Complemental strand, 10581387 - 10581183
Alignment:
| Q |
118 |
atggaagattcaagaatttaaaacatacccggtggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatgg |
217 |
Q |
| |
|
||||||| |||| |||||||||||||||| | |||||||| |||| ||||||||||||||| | || ||||||||||||| || ||||||| |||||| |
|
|
| T |
10581387 |
atggaagtatcaataatttaaaacatacccagaggagcatagccaattgttccttttattccagttgtactagtattcttatgagtggtaccacaaatgg |
10581288 |
T |
|
| Q |
218 |
ttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactg |
317 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||||| | |||| || || |
|
|
| T |
10581287 |
ctgagacaagtcttgctgtgccaaaatcactcacatg----accatgtcatcatcaagaag---tgtgcttggctttagatcacaacgaaggaccaattg |
10581195 |
T |
|
| Q |
318 |
ctcacattctcg |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10581194 |
ctcacattctcg |
10581183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 220 - 327
Target Start/End: Original strand, 10716860 - 10716967
Alignment:
| Q |
220 |
gagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgct |
319 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| || | |
|
|
| T |
10716860 |
gagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttaagatcacaatgaatgattaattgtt |
10716959 |
T |
|
| Q |
320 |
cacattct |
327 |
Q |
| |
|
|||||||| |
|
|
| T |
10716960 |
cacattct |
10716967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 7193295 - 7193188
Alignment:
| Q |
219 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | ||| | ||| |
|
|
| T |
7193295 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttagatcacaatgaatgatcgattgc |
7193196 |
T |
|
| Q |
319 |
tcacattc |
326 |
Q |
| |
|
|||||||| |
|
|
| T |
7193195 |
tcacattc |
7193188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 305
Target Start/End: Original strand, 10652053 - 10652207
Alignment:
| Q |
151 |
ggagcataaccaactgttccttttattccgatggtgctagtattcttattagaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactca |
250 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| || || ||||| | ||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10652053 |
ggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatcactca |
10652152 |
T |
|
| Q |
251 |
catgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
10652153 |
catgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatg |
10652207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 10659998 - 10660090
Alignment:
| Q |
213 |
aatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||| |
|
|
| T |
10659998 |
aatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattacttggctttagatcacaatg |
10660090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 10746934 - 10747042
Alignment:
| Q |
219 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
318 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| || | || ||| ||| |
|
|
| T |
10746934 |
tgagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttgagatcacagtgaatgactaattgc |
10747033 |
T |
|
| Q |
319 |
tcacattct |
327 |
Q |
| |
|
||||||||| |
|
|
| T |
10747034 |
tcacattct |
10747042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 10588349 - 10588456
Alignment:
| Q |
219 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || | ||||||||| |||| | |||| |
|
|
| T |
10588349 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacgttgcttggctttatatcacaatgaaggaccacctgc |
10588448 |
T |
|
| Q |
319 |
tcacattc |
326 |
Q |
| |
|
|||||||| |
|
|
| T |
10588449 |
tcacattc |
10588456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 10216650 - 10216776
Alignment:
| Q |
201 |
agaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatca |
300 |
Q |
| |
|
|||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||| |
|
|
| T |
10216650 |
agaggtaccaccaatggttgagacaaatgttgctatgccaaaatcactcacatgagcaaccatgtcatcattcagaagaacattgcttggctttagatca |
10216749 |
T |
|
| Q |
301 |
caatggaggattaactgctcacattct |
327 |
Q |
| |
|
||||| | || || |||||||||||| |
|
|
| T |
10216750 |
caatgaataatcaattgctcacattct |
10216776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 219 - 329
Target Start/End: Complemental strand, 10559192 - 10559082
Alignment:
| Q |
219 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
318 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| || ||||||||||| |||| || ||| |
|
|
| T |
10559192 |
tgagacgagtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgc |
10559093 |
T |
|
| Q |
319 |
tcacattctcg |
329 |
Q |
| |
|
||||||||||| |
|
|
| T |
10559092 |
tcacattctcg |
10559082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 19605788 - 19605891
Alignment:
| Q |
223 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctcac |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| || || || |||| ||||||||||||||| || ||||||||||| |||| || ||||||| |
|
|
| T |
19605788 |
acaagtcttgctatgccaaaatcactcacatgtgcaacgatatcgtcgtcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcac |
19605887 |
T |
|
| Q |
323 |
attc |
326 |
Q |
| |
|
|||| |
|
|
| T |
19605888 |
attc |
19605891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 9836223 - 9836333
Alignment:
| Q |
195 |
cttattagaggtaccagaaatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttta |
294 |
Q |
| |
|
||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| || |
|
|
| T |
9836223 |
cttatgagaggtaccgtcaatggctgagataagtcttgctatgccaaaatcactcacgtgagcaaccatgttatcatcgagaaggatgttgcttggcttg |
9836322 |
T |
|
| Q |
295 |
agatcacaatg |
305 |
Q |
| |
|
| ||||||||| |
|
|
| T |
9836323 |
atatcacaatg |
9836333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10565532 - 10565464
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaa |
69 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
10565532 |
ccaaagctatacatatcaccacatgtggatacttcagcacccatcccatactctaaaacatgtaacaaa |
10565464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 11048576 - 11048684
Alignment:
| Q |
219 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
318 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||||||||| || | |||||| ||||| ||||| || ||||||||||| | || || ||| |
|
|
| T |
11048576 |
tgagacaagttttgcaatgccaaaatcactcacatgagcaaccatgtcgtcgttaagaagaacattacttggctttagatcacaatgaataatcaattgc |
11048675 |
T |
|
| Q |
319 |
tcacattct |
327 |
Q |
| |
|
||||||||| |
|
|
| T |
11048676 |
tcacattct |
11048684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10581524 - 10581456
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaa |
69 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
10581524 |
ccaaagctatacatgtcaccacatgcagatacttcagaacccatcccatactctaaagcatgtaacaaa |
10581456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10612239 - 10612171
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaa |
69 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||||||| |||| |
|
|
| T |
10612239 |
ccaaagctatacatatcaccacatgtggatacttcagcacccatcccatactctaaaacatgtagcaaa |
10612171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11048342 - 11048405
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgta |
64 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
11048342 |
ccaaagctatacatgtcaccacacgtggacacttcagaacccattccatactctaaaacatgta |
11048405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 323
Target Start/End: Complemental strand, 9825374 - 9825270
Alignment:
| Q |
219 |
tgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgc |
318 |
Q |
| |
|
||||||||||||||| ||||||||||||||| | |||| ||| || || ||||||| ||||| ||| ||||| || | ||||||||| |||||||| ||| |
|
|
| T |
9825374 |
tgagacaagtcttgcaatgccaaaatcactcgcctgagaaacaatatcttcatcaacaaggatattacttggctttatatcacaatgaaggattaattgc |
9825275 |
T |
|
| Q |
319 |
tcaca |
323 |
Q |
| |
|
||||| |
|
|
| T |
9825274 |
tcaca |
9825270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10716657 - 10716725
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaa |
69 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||| ||||||||| |||| |
|
|
| T |
10716657 |
ccaaagctatacatgtcaccacatgtggacacttcagaacccattccatactctgaaacatgtagcaaa |
10716725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10746703 - 10746771
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgtaacaaa |
69 |
Q |
| |
|
|||||||||||||| |||||| | ||||| ||||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
10746703 |
ccaaagctatacatatcaccatatgtggacacttcagaacccattccatactctaaaacatgtagcaaa |
10746771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10762521 - 10762584
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgta |
64 |
Q |
| |
|
||||||||||||||||||||| | || || ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
10762521 |
ccaaagctatacatgtcaccagatgttgacacttcagaacccattccatactctaaaacatgta |
10762584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10588140 - 10588194
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactcta |
55 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||| |||||||| |||||||||| |
|
|
| T |
10588140 |
ccaaagctatacatgtcaccagatgtggatacttcagaacccattccatactcta |
10588194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10740106 - 10740167
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatg |
62 |
Q |
| |
|
||||||||||||||||||||| | || || ||||| |||||||| ||||||||||||||||| |
|
|
| T |
10740106 |
ccaaagctatacatgtcaccagatgttgacacttcagaacccattccatactctaaaacatg |
10740167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9836009 - 9836069
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacat |
61 |
Q |
| |
|
||||||||||||||||||||| | || ||| |||| |||||||| |||||||||||||||| |
|
|
| T |
9836009 |
ccaaagctatacatgtcaccatatgttgatgcttcagaacccattccatactctaaaacat |
9836069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10605281 - 10605218
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaacatgta |
64 |
Q |
| |
|
||||||||||||||||||||||| | || ||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
10605281 |
ccaaagctatacatgtcaccacatatagacacttcagaacccattccatactctgaaacatgta |
10605218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 10651886 - 10651940
Alignment:
| Q |
4 |
aagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaa |
58 |
Q |
| |
|
|||||||||||||||||| | ||||||| ||| |||||||| ||||||||||||| |
|
|
| T |
10651886 |
aagctatacatgtcaccatatgtggatatttcagaacccattccatactctaaaa |
10651940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9825580 - 9825523
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaa |
58 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||| ||| |||| ||||||||||||| |
|
|
| T |
9825580 |
ccaaagctatacatgtcaccataagtggaaactttagaatccattccatactctaaaa |
9825523 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10559427 - 10559370
Alignment:
| Q |
1 |
ccaaagctatacatgtcaccacaagtggatacttctgaacccatcccatactctaaaa |
58 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
10559427 |
ccaaagctatacatgtcaccatgtgtggaaacttcagaacccattccatactctaaaa |
10559370 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 35423960 - 35423919
Alignment:
| Q |
264 |
gtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
35423960 |
gtcatcatcaagaagaacattgcttggtttaacatcacaatg |
35423919 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 10746839 - 10746921
Alignment:
| Q |
116 |
caatggaagattcaagaatttaaaacata----cccggtggagcataaccaactgttccttttattccgatggtgctagtatt |
194 |
Q |
| |
|
|||||||||| ||||||||||| |||||| || || |||||||| ||||| |||||||||||||| || || |||||||| |
|
|
| T |
10746839 |
caatggaagactcaagaatttagaacatatatacctggaggagcatagccaacagttccttttattccaattgtactagtatt |
10746921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 35376701 - 35376660
Alignment:
| Q |
264 |
gtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| ||||||||| |
|
|
| T |
35376701 |
gtcatcatcaagaagaacattgcttggcttaacatcacaatg |
35376660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 39875809 - 39875897
Alignment:
| Q |
217 |
gttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39875809 |
gttgaaacaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatg |
39875897 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 39883932 - 39884020
Alignment:
| Q |
217 |
gttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39883932 |
gttgaaacaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatg |
39884020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 39890886 - 39890974
Alignment:
| Q |
217 |
gttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
39890886 |
gttgaaacaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcttcaagaaggacattgcttggttttaaatcacaatg |
39890974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 28605907 - 28605827
Alignment:
| Q |
225 |
aagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| || |||||| | ||||||||| || | ||||||||| |
|
|
| T |
28605907 |
aagtcttgcttgtccaaaatcactcacatgagcaaccatgtcattatgaagaagaatattgcttggctttaaatcacaatg |
28605827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 326
Target Start/End: Original strand, 27723977 - 27724082
Alignment:
| Q |
221 |
agacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatggaggattaactgctc |
320 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||| ||||||||||||||| |||||||| | || ||||||| | ||||||||||| |||| |||||| |
|
|
| T |
27723977 |
agacaagttttgctagtccaaaatcactaacacgagcaaccatgtcattgtcaagaagaatgttatttggttttaaatcacaatggatgattggctgctc |
27724076 |
T |
|
| Q |
321 |
acattc |
326 |
Q |
| |
|
| |||| |
|
|
| T |
27724077 |
agattc |
27724082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 31467092 - 31467167
Alignment:
| Q |
230 |
ttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggtttaagatcacaatg |
305 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||||| || ||||| || || | ||||||||| |
|
|
| T |
31467092 |
ttgctatgccaaaatcactcacatgagctaccatagaatcatcaagaagaacgttgctaggctttaaatcacaatg |
31467167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 29623027 - 29623067
Alignment:
| Q |
262 |
atgtcatcatcaagaaggacattgcttggtttaagatcaca |
302 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||| |||||| |
|
|
| T |
29623027 |
atgtcatcatcaagaagaacattgcttggcttaacatcaca |
29623067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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