View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16577_low_12 (Length: 413)

Name: NF16577_low_12
Description: NF16577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16577_low_12
NF16577_low_12
[»] chr6 (23 HSPs)
chr6 (7-409)||(5285144-5285552)
chr6 (7-409)||(5261147-5261553)
chr6 (8-214)||(5445673-5445879)
chr6 (7-214)||(5342289-5342496)
chr6 (7-214)||(5094636-5094843)
chr6 (16-199)||(5183167-5183350)
chr6 (7-139)||(5104147-5104279)
chr6 (7-214)||(5369055-5369262)
chr6 (11-135)||(5691390-5691514)
chr6 (20-214)||(5158701-5158895)
chr6 (7-138)||(5355892-5356023)
chr6 (10-170)||(5395641-5395801)
chr6 (8-214)||(5068274-5068480)
chr6 (7-138)||(5133181-5133312)
chr6 (7-214)||(5424348-5424555)
chr6 (10-129)||(5075016-5075135)
chr6 (10-140)||(5148233-5148363)
chr6 (26-183)||(5382262-5382419)
chr6 (10-139)||(5348973-5349104)
chr6 (7-116)||(5277288-5277397)
chr6 (329-388)||(5446008-5446067)
chr6 (7-116)||(5175461-5175570)
chr6 (25-116)||(5432020-5432111)
[»] chr2 (1 HSPs)
chr2 (7-285)||(22585446-22585728)
[»] chr4 (9 HSPs)
chr4 (17-214)||(4322302-4322499)
chr4 (7-214)||(4125640-4125847)
chr4 (18-214)||(4351835-4352031)
chr4 (7-214)||(4334147-4334354)
chr4 (7-189)||(4359005-4359187)
chr4 (17-170)||(4343546-4343699)
chr4 (11-116)||(4135080-4135185)
chr4 (10-105)||(25568592-25568688)
chr4 (35-139)||(6649656-6649760)
[»] chr7 (1 HSPs)
chr7 (10-214)||(36215092-36215296)
[»] chr5 (2 HSPs)
chr5 (10-172)||(8876401-8876563)
chr5 (74-129)||(15801829-15801884)
[»] scaffold0294 (1 HSPs)
scaffold0294 (26-184)||(9898-10056)
[»] chr8 (3 HSPs)
chr8 (7-126)||(7165847-7165966)
chr8 (79-129)||(3363070-3363120)
chr8 (79-129)||(3392763-3392813)


Alignment Details
Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 7 - 409
Target Start/End: Complemental strand, 5285552 - 5285144
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5285552 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 5285453  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattat-caaaacaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||| ||    
T  5285452 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgatgtattataaaaaaaaa 5285353  T
Q  206 actgtaagactttgtannnnnnnnnna-----aaatttggatttaaagcatttaaagcttaagaatttaaaagaaacatttatagttgtcatcatccatt 300  Q
    ||||||||||||||||          |        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5285352 actgtaagactttgtataatgtttttatttttttttttggatttaaagcatttaaagcttaagaatttaaaagaaacatttatagttgtcatcatccatt 5285253  T
Q  301 tgttttgttgattatcatcaagaataattttggctgttaattttttgtgcttcataacttctagctagtaacgaatgattggtttcatggctagttttat 400  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5285252 tgttttgttgattatcatcgagaataattttgactgttaattttttgtgcttcataacttctagctagtaacgaatgattggtttcatggccagttttat 5285153  T
Q  401 atccacctt 409  Q
    || ||||||    
T  5285152 attcacctt 5285144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 7 - 409
Target Start/End: Complemental strand, 5261553 - 5261147
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5261553 tggacttcatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagat 5261454  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaa 206  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||    
T  5261453 atgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtgtgatcaggaggatgtgattgatgtattatcaaaacaaa 5261354  T
Q  207 ctgtaagactttgta----nnnnnnnnnnaaaatttggatttaaagcatttaaagcttaagaatttaaaagaaacatttatagttgtcatcatccatttg 302  Q
    ||||||||||| |||              ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  5261353 ctgtaagacttcgtataatttttttttttaaaatttggatttaaagcatttaaaacttaagaatttaaaagaaatatttatagtggtcagcatccatttg 5261254  T
Q  303 ttttgttgattatcatcaagaataattttggctgttaattttttgtgcttcataacttctagctagtaacgaatgattggtttcatggctagttttatat 402  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5261253 ttttgttgattatcatcgaaaattattttggctgttaattttttgtgcttcataacttctagctagtaacgaatgattggtttcatggccagttttatat 5261154  T
Q  403 ccacctt 409  Q
     ||||||    
T  5261153 tcacctt 5261147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 5445673 - 5445879
Alignment:
Q  8 ggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagata 107  Q
    ||||||| |||||||||||||||||| ||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  5445673 ggactttctgcagaaattggaataagtgtccttgttgctcgaagccttgtgactgttgatgataagaacatgcttggaatgcatggtcagctgcgagata 5445772  T
Q  108 tgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaac 207  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||||| ||||||    
T  5445773 tgggaagaggaatcgtttgtgaggaatcaccaaggaggcctgagaaacgtagtaggttgtgggatcaggaggatgtgattgatgtattatcaagacaaac 5445872  T
Q  208 tgtaaga 214  Q
    |||||||    
T  5445873 tgtaaga 5445879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 5342289 - 5342496
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||| | ||||||    |||||||  ||||||||||| | |||||||||||||    
T  5342289 tggactttttgcagaaattggaataagtgttcttgttgagcgaagccttgtaattgttgacagcaagaacaaacttggaatgcacgatttgctgcgagat 5342388  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaa 206  Q
    |||||||||| ||| ||||||||| ||||||||| |  || || | | |||||||||||||| | |  |||||||||| |||| ||||||||| ||||||    
T  5342389 atgggaagagaaatcgttcgtgagaaatcaccaaaggagcttggggagcgtagcaggttgtgctttaaggaggatgtgcttgatgtattatcagaacaaa 5342488  T
Q  207 ctgtaaga 214  Q
    | ||||||    
T  5342489 ccgtaaga 5342496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 5094636 - 5094843
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||| ||| ||||||||||||||  ||||||||||| | || ||||| | |||||||||||||||||  ||||||||||||| |||| ||||||||    
T  5094636 tggactttttgctgaaattggaataagtatccttgttgagcgtagtcttgtaactgttgatgataagaacaaacttggaatgcatgatttgttgcgagat 5094735  T
Q  107 atgggaagaggaattgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaa 205  Q
    |||||||||| |||  |||||||| |||||||| |||| ||  ||| | ||| |||||||||||| ||  || |||||| || | ||||||||| |||||    
T  5094736 atgggaagagaaatcattcgtgagaaatcaccagagga-gctcgaggagcgttgcaggttgtggtttcatgatgatgtgcttcatgtattatcagaacaa 5094834  T
Q  206 actgtaaga 214  Q
    |||||||||    
T  5094835 actgtaaga 5094843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5183350 - 5183167
Alignment:
Q  16 tgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaaga 115  Q
    ||||||||||||| |||| ||||||||||||||||||||||| | ||||||||||| |||||  ||   |||||||| ||||||  ||||||||||||||    
T  5183350 tgcagaaattggagtaagtgtccttgttgagagaagccttgtaactgttgatgataggaacaaactgcaaatgcatgatttgctaagagatatgggaaga 5183251  T
Q  116 ggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatca 199  Q
    | ||| ||||||||| | |||||||    ||||||| | |||||||||||||||| |    |||||||||||||||||||||||    
T  5183250 gaaatcgttcgtgagaagtcaccaaaagagcctgaggagcgtagcaggttgtggtttaacaaggatgtgattgacgtattatca 5183167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 5104279 - 5104147
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||| ||||||||||||||||||  ||||||||||| |||| ||| | | |||||||||||||||||  ||||||||||||| |||| ||||||||    
T  5104279 tggactttttgcagaaattggaataagtatccttgttgagcgaagtcttataactgttgatgataagaacaaacttggaatgcatgatttgttgcgagat 5104180  T
Q  107 atgggaagaggaattgttcgtgaggaatcacca 139  Q
    |||||||||| |||  |||||||| ||||||||    
T  5104179 atgggaagagaaatcattcgtgagaaatcacca 5104147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 5369055 - 5369262
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||| ||| ||||||||||||||  ||||||||||| |||| ||||| | |||||||||||||||||  ||||||||||||| |||| ||||||||    
T  5369055 tggactttttgctgaaattggaataagtatccttgttgagcgaagtcttgtcactgttgatgataagaacaaacttggaatgcatgatttgttgcgagat 5369154  T
Q  107 atgggaagaggaattgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaa 205  Q
    |||||||||| |||  |||||| | |||||||| | || ||  ||| | ||| |||||||||||| ||  ||||||||| || | ||||||||| | |||    
T  5369155 atgggaagagaaatcattcgtgggaaatcaccagaaga-gctcgaggagcgttgcaggttgtggtttcatgaggatgtgcttcatgtattatcagatcaa 5369253  T
Q  206 actgtaaga 214  Q
    |||||||||    
T  5369254 actgtaaga 5369262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 5691514 - 5691390
Alignment:
Q  11 ctttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgg 110  Q
    |||||||||| |||||||||||  |||||||| ||| |||||||||||| ||||||||||| ||||| |||| ||||||||| |||| ||||||||||||    
T  5691514 ctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactgttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgg 5691415  T
Q  111 gaagaggaattgttcgtgaggaatc 135  Q
    |||||| ||| ||||||||| ||||    
T  5691414 gaagagaaatcgttcgtgagaaatc 5691390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 5158895 - 5158701
Alignment:
Q  20 gaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagaggaa 119  Q
    ||||||||||||||| ||||||||||| | || ||||| | |||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||| ||    
T  5158895 gaaattggaataagcatccttgttgagcgtagtcttgttactgttgatggtaagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaa 5158796  T
Q  120 ttgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaactgtaaga 214  Q
    |  |||||||| |||||||| |||||  | ||| | ||| |||||||||||| ||  || |||||| || | ||||||||| ||||||||||||||    
T  5158795 tcattcgtgagaaatcaccagaggagatc-gaggagcgttgcaggttgtggtttcatgacgatgtgcttcatgtattatcagaacaaactgtaaga 5158701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 5356023 - 5355892
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||||||| ||||||||||||||  | ||||||||| |||||||||| | ||||||||||||||| | |||| ||||||||| |||||| ||||||    
T  5356023 tggactttatgctgaaattggaataagtattcttgttgagcgaagccttgtaactgttgatgataagaataggcttagaatgcatgatttgctacgagat 5355924  T
Q  107 atgggaagaggaattgttcgtgaggaatcacc 138  Q
    |||||||||| | | ||||||||| |||||||    
T  5355923 atgggaagagaagtcgttcgtgagaaatcacc 5355892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 170
Target Start/End: Original strand, 5395641 - 5395801
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatg 109  Q
    ||||| ||||||||||||| |||| |||||||||||| |||||||||| | ||||||||||| |||||  |||| |||||||| ||||||  ||||||||    
T  5395641 actttttgcagaaattggagtaagtgtccttgttgagcgaagccttgtaactgttgatgataggaacagacttgcaatgcatgatttgctaagagatatg 5395740  T
Q  110 ggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggt 170  Q
    ||||||| ||| ||||||||| | |||||||    ||| ||| | ||||||||||||||||    
T  5395741 ggaagagaaatcgttcgtgagaagtcaccaaaagagcccgaggagcgtagcaggttgtggt 5395801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 5068480 - 5068274
Alignment:
Q  8 ggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagata 107  Q
    ||||||| ||| ||||||||||||||  ||||||||||| |||| || || | ||||||| | |||||||  ||||||||||||| |||| |||||||||    
T  5068480 ggactttttgctgaaattggaataagtatccttgttgagcgaagtctggttattgttgataaaaagaacaaacttggaatgcatgatttgttgcgagata 5068381  T
Q  108 tgggaagaggaattgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaa 206  Q
    ||||||||| ||| ||||||| | |||||||| | || ||  ||| | ||| |||||||||||| || |||||||| | || | ||||||||| ||||||    
T  5068380 tgggaagagaaatcgttcgtgggaaatcaccagaaga-gctcgaggagcgttgcaggttgtggtttcaggaggatgcgcttcaagtattatcagaacaaa 5068282  T
Q  207 ctgtaaga 214  Q
    ||||||||    
T  5068281 ctgtaaga 5068274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 5133312 - 5133181
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||| ||| ||||||||||||||  | ||| |||||||||||||||| | |||||||| |||| ||| |||||||||||||| |||| || |||||    
T  5133312 tggactttttgccgaaattggaataagtattcttattgagagaagccttgtaactgttgatgctaaggacaggcttggaatgcatgatttgttgagagat 5133213  T
Q  107 atgggaagaggaattgttcgtgaggaatcacc 138  Q
    |||||||||| |||| ||||||| ||||||||    
T  5133212 atgggaagagaaattattcgtgaagaatcacc 5133181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 5424348 - 5424555
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||| ||| ||||||||||||||  ||||||||||| | || ||||| | |||||||||||| ||||  ||||||||||||| |||| ||||||||    
T  5424348 tggactttttgctgaaattggaataagtatccttgttgagcggagtcttgtcactgttgatgataataacaaacttggaatgcatgatttgttgcgagat 5424447  T
Q  107 atgggaagaggaattgttcgtgaggaatcacca-aggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaa 205  Q
    |||||||||| |||  |||||| | |||||||| | || ||  ||| | ||| |||||||||||| ||  ||||||||| || | ||||||||| | |||    
T  5424448 atgggaagagaaatcattcgtgggaaatcaccagaaga-gctcgaggagcgttgcaggttgtggtttcatgaggatgtgcttcatgtattatcagatcaa 5424546  T
Q  206 actgtaaga 214  Q
    |||||||||    
T  5424547 actgtaaga 5424555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 5075135 - 5075016
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatg 109  Q
    ||||| ||| ||||||||| |||| || ||||||||| |||||||||| | ||| ||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  5075135 actttttgctgaaattggagtaagtgtacttgttgagcgaagccttgtaactgtcgatgataggaacaagcttggaatgcatgatttgctgcgtgatatg 5075036  T
Q  110 ggaagaggaattgttcgtga 129  Q
    ||||||| |||  |||||||    
T  5075035 ggaagagaaatcattcgtga 5075016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 5148363 - 5148233
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatg 109  Q
    |||||||||||||||||||||||  |||||  | ||| |||||||||||| ||||||||||| |||   |||||||||||||| |||| ||||||| |||    
T  5148363 actttatgcagaaattggaataaatgtcctactggagcgaagccttgtgactgttgatgatatgaatcggcttggaatgcatgatttgttgcgagacatg 5148264  T
Q  110 ggaagaggaattgttcgtgaggaatcaccaa 140  Q
    | ||||| |||  | || |||||||||||||    
T  5148263 gcaagagaaatcatacgcgaggaatcaccaa 5148233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 5382262 - 5382419
Alignment:
Q  26 ggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagaggaattgttc 125  Q
    |||||||| ||||||||||||||||||||||| | ||| ||||||||||| |  ||||||||||||| |||| |  | ||||||||||||| |||  |||    
T  5382262 ggaataagtgtccttgttgagagaagccttgtaactgtcgatgataagaatacacttggaatgcatgatttgttaagggatatgggaagagaaatcattc 5382361  T
Q  126 gtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgt 183  Q
    ||||  ||||||||| |   |||||| | ||||||||||| |||| ||  ||||||||    
T  5382362 gtgaaaaatcaccaaaggatcctgaggagcgtagcaggttatggtttcatgaggatgt 5382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 5348973 - 5349104
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgc--atggtttgctgcgagata 107  Q
    ||||| ||| ||||||||||||||  || |||||||  |||| ||||| | |||||||||||||||||  ||||||||||  ||| |||| |||||||||    
T  5348973 actttttgctgaaattggaataagtatctttgttgatcgaagtcttgtcactgttgatgataagaacaaacttggaatgcatatgatttgttgcgagata 5349072  T
Q  108 tgggaagaggaattgttcgtgaggaatcacca 139  Q
    ||||||||| |||  |||||| | ||||||||    
T  5349073 tgggaagagaaatcattcgtgggaaatcacca 5349104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 5277288 - 5277397
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||| ||| |||||||  ||||||||| |||||||||||| ||||| | || |  |||||| |||| |||| |||||||||||||  |||| |||| |||    
T  5277288 tggattttttgcagaagatggaataagtgtccttgttgagcgaagcttagtaacggttgataataaaaacaagcttggaatgcataatttgttgcgggat 5277387  T
Q  107 atgggaagag 116  Q
    ||||||||||    
T  5277388 atgggaagag 5277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 5446008 - 5446067
Alignment:
Q  329 tttggctgttaattttttgtgcttcataacttctagctagtaacgaatgattggtttcat 388  Q
    ||||| ||| || |||||||||||||| |||||||||||||||| | |||||||||||||    
T  5446008 tttggttgtgaactttttgtgcttcatgacttctagctagtaacaactgattggtttcat 5446067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 5175461 - 5175570
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||| ||| |||||||  ||||||||| ||||| |||||| ||||| | || |  |||||| |||| |||| |||||||||||||  |||| |||| |||    
T  5175461 tggattttttgcagaagatggaataagtgtcctggttgagcgaagcttagtaacggttgataataaaaacaagcttggaatgcataatttgttgcgggat 5175560  T
Q  107 atgggaagag 116  Q
    ||||||||||    
T  5175561 atgggaagag 5175570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 5432020 - 5432111
Alignment:
Q  25 tggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagag 116  Q
    ||||||||| |||||||||||| | ||| | ||   | |||||||| | |||| |||||||||||||| |||| |||| |||||||||||||    
T  5432020 tggaataagagtccttgttgagcgtagcttagtatatattgatgatgataacaagcttggaatgcatgatttgttgcgggatatgggaagag 5432111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 7 - 285
Target Start/End: Complemental strand, 22585728 - 22585446
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  22585728 tggacttcatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacaggcttggaatgcatgatttgctgcgagat 22585629  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaa 206  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22585628 atgggaagaggaattgttcttgaggaatcaccaaagagtcctgagaagcgtagcaggttgttgtatccggaggatgtgattgacgtattatcaaaacaaa 22585529  T
Q  207 ctgtaagactttgt---annnnnnnnnnaaaatttggatttaaagcatttaaagcttaagaattt-aaaagaaacatttatag 285  Q
    ||||||||||||||   |           ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  22585528 ctgtaagactttgtataatttttttttttaaatttggatttaaagcatttaaagattaagaatttaaaaagaaacatttatag 22585446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 4322499 - 4322302
Alignment:
Q  17 gcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagag 116  Q
    ||||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |    
T  4322499 gcagaaattggaataagtgtccttgttgagagaagccttgtaacggttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaaggg 4322400  T
Q  117 gaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaactgtaaga 214  Q
     |||  |||||||| ||||||||| |  ||||||| ||||||| |||||||||| ||  || |||||| |||| ||||| ||| |||| |||||||||    
T  4322399 aaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcatgatgatgtgcttgatgtattgtcagaacatactgtaaga 4322302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 214
Target Start/End: Complemental strand, 4125847 - 4125640
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    ||||||||  || |||||||||||||| |||||||||||  |||||||||| |  |||||||||||||||| |||||| ||||||| |||||||||||||    
T  4125847 tggacttttcgctgaaattggaataagtgtccttgttgaacgaagccttgtaacagttgatgataagaacaagcttggcatgcatgatttgctgcgagat 4125748  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaa 206  Q
    |||||||||| |||  |||||||| ||||||||| |  ||||||| ||||||| |||||||||||||  ||||||||||||||  |||| ||| |||| |    
T  4125747 atgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtatcatgaggatgtgattgatatattgtcagaacata 4125648  T
Q  207 ctgtaaga 214  Q
    | ||||||    
T  4125647 cggtaaga 4125640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 4351835 - 4352031
Alignment:
Q  18 cagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagagg 117  Q
    |||||||||||||||  || |||||||||||||||||||| |  ||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||     
T  4351835 cagaaattggaataaaggttcttgttgagagaagccttgtaatcgttgatgataaaaacaagcttggcatgcatgatttgctgcgagatatgggaagaga 4351934  T
Q  118 aattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaactgtaaga 214  Q
    |||  |||||||| ||||||||| |  ||||||| ||||||| |||||||||| ||  | ||||||| |||| ||||| |||||||| |||||||||    
T  4351935 aatcattcgtgagaaatcaccaaaggagcctgaggaacgtagtaggttgtggtttcacggggatgtgcttgatgtattgtcaaaacatactgtaaga 4352031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 4334147 - 4334354
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    ||||||||  || |||||||||||||| |||||||||||| |||||||||| |  || |||| |||||||| |||||| ||||||| |||||| ||||||    
T  4334147 tggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacggtcgatggtaagaacaagcttggcatgcatgatttgcttcgagat 4334246  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaa 206  Q
    |||||||||| |||  |||||||| ||||||||| |  ||||||| ||||||| |||||||||| ||  ||||||||| |||| ||||| ||| |||| |    
T  4334247 atgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtaggttgtggtttcatgaggatgtgcttgatgtattgtcagaacata 4334346  T
Q  207 ctgtaaga 214  Q
    ||||||||    
T  4334347 ctgtaaga 4334354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 4359005 - 4359187
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||| ||| ||||| |||||||||||| ||||||||||||||||||||||| |  |||||||||||||||| |||||| ||||||| |||||| ||||||    
T  4359005 tggattttttgcaggaattggaataagtgtccttgttgagagaagccttgtaacggttgatgataagaacaagcttggcatgcatgatttgctccgagat 4359104  T
Q  107 atgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattga 189  Q
    |||||||||| |||  |||||||| ||||||||| |  ||||||| ||| ||| ||| |||||| ||  ||||||||||||||    
T  4359105 atgggaagagaaatcattcgtgagaaatcaccaaaggagcctgaggaacatagtaggctgtggtttcatgaggatgtgattga 4359187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 4343546 - 4343699
Alignment:
Q  17 gcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagag 116  Q
    |||||||| || ||||| ||||||||||||||||||||||| |  |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  4343546 gcagaaatcggcataagtgtccttgttgagagaagccttgtaatggttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaagag 4343645  T
Q  117 gaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggt 170  Q
     |||  |||||||| |||| |||| |  ||||||| ||| ||| ||||||||||    
T  4343646 aaatcattcgtgagaaatcgccaaaggagcctgaggaacatagtaggttgtggt 4343699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 4135185 - 4135080
Alignment:
Q  11 ctttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgg 110  Q
    |||| ||| ||||| |||||||| |||||||||||| |||||||||| | | |||||||||| |||| |||||||||||||| |||||| ||||||||||    
T  4135185 ctttttgctgaaatcggaataagtgtccttgttgagcgaagccttgtaactattgatgataaaaacaagcttggaatgcatgatttgctacgagatatgg 4135086  T
Q  111 gaagag 116  Q
    ||||||    
T  4135085 gaagag 4135080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 25568592 - 25568688
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatg-ataagaacatgcttggaatgcatggtttgctgcgaga 105  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||| | |||||| ||  |||||  ||||||||||||| |||| |||||||    
T  25568592 actttatgcagaaattggaataaacgtccttgttgagcgaagccttgtgactattgatgaattggaacagacttggaatgcatgatttgttgcgaga 25568688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 6649656 - 6649760
Alignment:
Q  35 gtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagaggaattgttcgtgaggaat 134  Q
    |||||||| |||||||||||||| | ||||||  ||| ||||| |||| ||||||||| |||| |  |||| |||||| ||  ||| |||  ||||||||    
T  6649656 gtccttgtagagagaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttgttaagagacatgggacgacaaatagtttatgaggaat 6649755  T
Q  135 cacca 139  Q
    |||||    
T  6649756 cacca 6649760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 214
Target Start/End: Complemental strand, 36215296 - 36215092
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatg 109  Q
    ||||| ||||||||||||| |||| || ||||| ||| |||||||||| | ||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  36215296 actttttgcagaaattggagtaagtgttcttgtagagcgaagccttgtaactgttgatgataggaacaggcttggaatgcatgatttgctgcgagatatg 36215197  T
Q  110 ggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtgattgacgtattatcaaaacaaactg 209  Q
    |||||||  ||  |||||||| ||||||||| |  || |||| | |||||||||||||||| |    |||| |||  ||| ||||||||| |||||||||    
T  36215196 ggaagagagatcattcgtgagaaatcaccaaaggagcttgaggagcgtagcaggttgtggtttaataaggacgtggctgatgtattatcagaacaaactg 36215097  T
Q  210 taaga 214  Q
    |||||    
T  36215096 taaga 36215092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 8876401 - 8876563
Alignment:
Q  10 actttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatg 109  Q
    ||||||| | |||||||||||||| || ||||||||  |||||||||| |   | ||||| | ||| |||||||||||||||| |||| ||  |||||||    
T  8876401 actttatcctgaaattggaataagtgttcttgttgaacgaagccttgtaaccatggatgaaaggaatatgcttggaatgcatgatttgttgacagatatg 8876500  T
Q  110 ggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtat 172  Q
    ||||||| |||  |||||||| ||||||||| |   |||||| | ||||||||||||||||||    
T  8876501 ggaagagaaatcattcgtgagaaatcaccaaaggatcctgaggagcgtagcaggttgtggtat 8876563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 15801829 - 15801884
Alignment:
Q  74 aacatgcttggaatgcatggtttgctgcgagatatgggaagaggaattgttcgtga 129  Q
    |||| |||||||||||||| | |||| ||||| |||||||||| ||||||||||||    
T  15801829 aacaagcttggaatgcatgctctgctacgagacatgggaagagaaattgttcgtga 15801884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 10056 - 9898
Alignment:
Q  26 ggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagatatgggaagaggaattgttc 125  Q
    |||||||| |||||||||||| |||||||| | | ||| ||||||||||| |  ||||||||||||| |||  | |||||||||||||| | |||  |||    
T  10056 ggaataagtgtccttgttgagcgaagccttctaactgtcgatgataagaatacacttggaatgcatgatttattacgagatatgggaagggaaatcattc 9957  T
Q  126 gtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtggtatccggaggatgtg 184  Q
    ||||  |||||||||||   |||||| | ||||| ||||| |||| ||  |||||||||    
T  9956 gtgaaaaatcaccaagggatcctgaggaccgtagtaggttatggtttcaagaggatgtg 9898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 7165966 - 7165847
Alignment:
Q  7 tggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgctgcgagat 106  Q
    |||||||||||| || ||||||||||  ||||| || ||| | ||||||||||   ||||  | || |||| |||||||||||||| ||||||  ||||     
T  7165966 tggactttatgctgacattggaataacggtcctcgtagagcggagccttgtgaaaattgaaaagaataacaagcttggaatgcatgatttgcttagagac 7165867  T
Q  107 atgggaagaggaattgttcg 126  Q
    |||||||||| |||||||||    
T  7165866 atgggaagagaaattgttcg 7165847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 3363070 - 3363120
Alignment:
Q  79 gcttggaatgcatggtttgctgcgagatatgggaagaggaattgttcgtga 129  Q
    |||||||||||||| |||||| ||||| |||||||| | ||||||||||||    
T  3363070 gcttggaatgcatgctttgctacgagacatgggaagggaaattgttcgtga 3363120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 3392813 - 3392763
Alignment:
Q  79 gcttggaatgcatggtttgctgcgagatatgggaagaggaattgttcgtga 129  Q
    |||||||||||||| |||||| ||||| |||||||| | ||||||||||||    
T  3392813 gcttggaatgcatgatttgctacgagacatgggaagggaaattgttcgtga 3392763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University