View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16577_low_22 (Length: 328)
Name: NF16577_low_22
Description: NF16577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16577_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 10 - 277
Target Start/End: Original strand, 25121268 - 25121535
Alignment:
| Q |
10 |
attattctaagctgtgaaaattttagttcaagatcaagagtttgttctcctaaacaaagatcatctcaagaagacaaagatgatgatattaatgttgcta |
109 |
Q |
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| T |
25121268 |
attattctaagctgtgaaaattttagttcaagatcaagagtttgttctcctaaacaaagatcatctcaagaagacaaagatgatgatattaatgttgcta |
25121367 |
T |
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| Q |
110 |
ctttggaagagacaagttcttatctttctttggatttgaatatttctattgatgaggattacaatgaggatgataaattggttgatgaaattgggctact |
209 |
Q |
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| T |
25121368 |
ctttggaagagacaagttcttatgtttctttggatttgaatatttctattgatgaggattacaatgaggatgataaattggttgatgaaattgggctact |
25121467 |
T |
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| Q |
210 |
tgaatccgtagacagaaagattctcttcaaaattcaagaattatgaagaaaatttcttgaacacagcc |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25121468 |
tgaatccgtagacagaaagattctcttcaaaattcaagaattatgaagaaaatttcttgaacacagcc |
25121535 |
T |
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