View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16578_high_13 (Length: 362)
Name: NF16578_high_13
Description: NF16578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16578_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 16 - 346
Target Start/End: Original strand, 45106839 - 45107169
Alignment:
| Q |
16 |
tgaaaccatgattatgaatataaccacacaatatattttcggacggatatcctgcattcaaaagtatatttgatcaagaacagaaaattaaaaataaaag |
115 |
Q |
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| T |
45106839 |
tgaaaccatgattatgaatataaccacacaatatattttcggacggatatcctgcattcataagtatatttgatcaagaacagaaaatttaaaataaaag |
45106938 |
T |
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| Q |
116 |
catactcaatttctacggttaattcaattttttccctagaaaatgtgtgtgatgaaggggagagattttagtacttacatttctatccaatgcggtagag |
215 |
Q |
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| T |
45106939 |
catactcaatttctacggttaattcaattttttccctagaaaatgtgtgtgatgaaggggagagattttagtacatacatttctatccaatgcggtagag |
45107038 |
T |
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| Q |
216 |
tacatgtttacttccacaacacctttgcagttcaaaagtagggcaagggagataccatcctttaaaggcatgttgaaaatgagtgaagatagaaagcatg |
315 |
Q |
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| T |
45107039 |
tacatgtttacttccacaacacctttgcagttcaaaagtagggcaagggagataccatcctttaaaggcatgttgaaaatgagtgaagatagaaagcatg |
45107138 |
T |
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| Q |
316 |
ctaccatttttaaaaaataacccgtaaataa |
346 |
Q |
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| T |
45107139 |
ctaccatttttaaaaaataaccagtaaataa |
45107169 |
T |
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