View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16578_high_35 (Length: 259)
Name: NF16578_high_35
Description: NF16578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16578_high_35 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 41425249 - 41425479
Alignment:
| Q |
14 |
agaatatgtaacatataattgaggttttatttgctaatgtgtactaataattaatgtatataaatgttaatatcaataaagagttgtcgtggaatggaac |
113 |
Q |
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| T |
41425249 |
agaatatgtaacatataattgaggttttatttgctaatgtgtactgataattaatgtatataaatgttaatatcaataaagagttgttgtggaatggaac |
41425348 |
T |
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| Q |
114 |
atgagggaacattacacttgttcgtcatttccgtttggaaagtagaagcatcaagcatgtatagaatatgtttattttggcctccattttgtaatttatt |
213 |
Q |
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| T |
41425349 |
atgagggaacattacacttgttcctcatttccgtttggaaagtagaagcatcaagcatgtatagaatatgtttattttggcctccattttgtaatttatt |
41425448 |
T |
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| Q |
214 |
gaaccaattaagaaaatcaacatgtatattt |
244 |
Q |
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| T |
41425449 |
gaaccaattaagaaaatcaacatgtatattt |
41425479 |
T |
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