View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16579_low_11 (Length: 277)

Name: NF16579_low_11
Description: NF16579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16579_low_11
NF16579_low_11
[»] chr4 (93 HSPs)
chr4 (1-151)||(51859473-51859628)
chr4 (1-135)||(52573315-52573449)
chr4 (1-151)||(27068976-27069131)
chr4 (1-151)||(10408094-10408249)
chr4 (1-135)||(39666981-39667115)
chr4 (2-135)||(54858647-54858780)
chr4 (1-135)||(27891671-27891805)
chr4 (2-135)||(45463279-45463412)
chr4 (1-135)||(22718144-22718278)
chr4 (1-132)||(39700999-39701130)
chr4 (1-135)||(9731417-9731551)
chr4 (1-135)||(22986938-22987072)
chr4 (1-135)||(50504030-50504164)
chr4 (39-135)||(50503912-50504008)
chr4 (39-151)||(54858803-54858920)
chr4 (39-135)||(52573471-52573567)
chr4 (39-151)||(27069153-27069270)
chr4 (39-151)||(45463139-45463256)
chr4 (39-135)||(39666863-39666959)
chr4 (39-135)||(39701152-39701248)
chr4 (40-135)||(10407976-10408071)
chr4 (39-135)||(22718026-22718122)
chr4 (39-135)||(22987094-22987190)
chr4 (48-135)||(51859658-51859745)
chr4 (39-151)||(3032648-3032765)
chr4 (39-135)||(11524036-11524132)
chr4 (45-135)||(5818024-5818114)
chr4 (1-79)||(11524154-11524232)
chr4 (40-133)||(32063582-32063675)
chr4 (40-99)||(23455077-23455136)
chr4 (40-133)||(30641607-30641699)
chr4 (42-135)||(55867362-55867455)
chr4 (41-131)||(148002-148092)
chr4 (1-47)||(3032787-3032833)
chr4 (89-131)||(14802030-14802072)
chr4 (73-135)||(22923225-22923287)
chr4 (73-135)||(22927878-22927940)
chr4 (73-135)||(22984157-22984219)
chr4 (73-135)||(22997745-22997807)
chr4 (89-131)||(46661209-46661251)
chr4 (42-99)||(23455609-23455666)
chr4 (40-133)||(40316909-40317002)
chr4 (40-133)||(40326983-40327076)
chr4 (90-131)||(51692815-51692856)
chr4 (41-98)||(52815787-52815844)
chr4 (91-131)||(1178134-1178174)
chr4 (42-98)||(38982516-38982572)
chr4 (42-98)||(52816343-52816399)
chr4 (42-98)||(56556706-56556762)
chr4 (41-99)||(147442-147500)
chr4 (89-131)||(7452098-7452140)
chr4 (42-135)||(11447977-11448070)
chr4 (89-131)||(13058277-13058319)
chr4 (89-131)||(17356016-17356058)
chr4 (98-151)||(27149298-27149356)
chr4 (93-131)||(37976244-37976282)
chr4 (89-131)||(44967160-44967202)
chr4 (89-131)||(49879298-49879340)
chr4 (89-131)||(50418759-50418801)
chr4 (41-135)||(50751745-50751839)
chr4 (89-131)||(53129597-53129639)
chr4 (89-131)||(54086786-54086828)
chr4 (90-131)||(34765471-34765512)
chr4 (90-131)||(52909549-52909590)
chr4 (91-131)||(36008935-36008975)
chr4 (42-98)||(38814247-38814303)
chr4 (40-132)||(39538170-39538262)
chr4 (42-98)||(56557245-56557301)
chr4 (92-131)||(35028089-35028128)
chr4 (89-131)||(1179095-1179137)
chr4 (89-131)||(4982817-4982859)
chr4 (89-131)||(22567063-22567105)
chr4 (89-131)||(24711375-24711417)
chr4 (89-131)||(27934795-27934837)
chr4 (89-131)||(43155620-43155662)
chr4 (93-131)||(53702111-53702149)
chr4 (90-131)||(9400610-9400651)
chr4 (89-133)||(30642441-30642485)
chr4 (92-131)||(8438371-8438410)
chr4 (92-131)||(8439522-8439561)
chr4 (92-131)||(18831615-18831654)
chr4 (91-130)||(23613575-23613614)
chr4 (89-132)||(39539213-39539256)
chr4 (89-131)||(9144857-9144899)
chr4 (93-127)||(15507768-15507802)
chr4 (89-131)||(16006102-16006143)
chr4 (93-131)||(37248504-37248542)
chr4 (89-131)||(38012434-38012476)
chr4 (90-131)||(35508332-35508372)
chr4 (45-98)||(38813678-38813731)
chr4 (103-131)||(24350741-24350769)
chr4 (91-119)||(24411655-24411683)
chr4 (103-131)||(54713720-54713748)
[»] chr8 (67 HSPs)
chr8 (1-135)||(15230136-15230270)
chr8 (1-135)||(25124768-25124902)
chr8 (1-135)||(44664595-44664729)
chr8 (1-132)||(41353779-41353909)
chr8 (1-135)||(21432898-21433032)
chr8 (7-135)||(42945325-42945453)
chr8 (1-151)||(6471756-6471911)
chr8 (5-135)||(37542433-37542564)
chr8 (1-131)||(27500293-27500423)
chr8 (39-151)||(10445578-10445695)
chr8 (39-135)||(42945201-42945297)
chr8 (40-135)||(35634343-35634438)
chr8 (40-151)||(15229997-15230113)
chr8 (39-135)||(39474633-39474728)
chr8 (50-135)||(8997943-8998028)
chr8 (39-151)||(37542290-37542407)
chr8 (9-82)||(38003667-38003740)
chr8 (40-132)||(34177216-34177308)
chr8 (39-135)||(38003542-38003638)
chr8 (39-151)||(25124629-25124746)
chr8 (43-135)||(21432780-21432872)
chr8 (39-135)||(44664751-44664847)
chr8 (44-133)||(2535800-2535889)
chr8 (1-70)||(7983633-7983702)
chr8 (39-135)||(6471933-6472029)
chr8 (44-151)||(7983494-7983606)
chr8 (39-135)||(41353661-41353757)
chr8 (40-132)||(7294191-7294283)
chr8 (39-135)||(27500176-27500271)
chr8 (42-132)||(34176531-34176621)
chr8 (42-98)||(34666461-34666517)
chr8 (89-131)||(8316744-8316786)
chr8 (89-131)||(23663636-23663678)
chr8 (89-131)||(36928771-36928813)
chr8 (89-131)||(38862858-38862900)
chr8 (89-131)||(39071937-39071979)
chr8 (91-151)||(234035-234100)
chr8 (91-151)||(710446-710511)
chr8 (91-151)||(747658-747723)
chr8 (91-151)||(871553-871618)
chr8 (42-135)||(2534782-2534875)
chr8 (42-99)||(11761963-11762020)
chr8 (42-99)||(34213887-34213944)
chr8 (42-98)||(34665894-34665950)
chr8 (89-132)||(34061623-34061666)
chr8 (89-131)||(12273009-12273051)
chr8 (89-131)||(35756877-35756919)
chr8 (90-131)||(12199041-12199082)
chr8 (90-131)||(12443469-12443510)
chr8 (90-131)||(34685554-34685595)
chr8 (42-98)||(34214448-34214504)
chr8 (93-131)||(1425144-1425182)
chr8 (89-131)||(11674958-11675000)
chr8 (89-131)||(13186354-13186396)
chr8 (89-131)||(23698400-23698442)
chr8 (89-131)||(36325498-36325540)
chr8 (89-131)||(40318055-40318097)
chr8 (90-131)||(36186192-36186233)
chr8 (90-131)||(38955968-38956009)
chr8 (91-131)||(4994748-4994788)
chr8 (89-131)||(31608604-31608646)
chr8 (90-131)||(4405753-4405794)
chr8 (82-135)||(39071763-39071816)
chr8 (91-131)||(16388652-16388692)
chr8 (91-131)||(23505143-23505183)
chr8 (91-131)||(23507722-23507762)
chr8 (108-151)||(40318278-40318326)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-151)||(11345-11500)
scaffold0328 (39-135)||(11227-11323)
[»] chr7 (69 HSPs)
chr7 (1-151)||(25628544-25628699)
chr7 (1-135)||(22081646-22081780)
chr7 (1-151)||(42618116-42618271)
chr7 (1-135)||(46205514-46205648)
chr7 (1-135)||(32068301-32068435)
chr7 (1-135)||(10600154-10600288)
chr7 (1-135)||(25453333-25453467)
chr7 (1-135)||(32934553-32934687)
chr7 (1-151)||(23058634-23058789)
chr7 (1-135)||(43266353-43266487)
chr7 (39-135)||(43266509-43266605)
chr7 (34-135)||(28890666-28890767)
chr7 (39-135)||(25628721-25628817)
chr7 (39-135)||(32934435-32934531)
chr7 (39-135)||(42617998-42618094)
chr7 (39-151)||(32068162-32068279)
chr7 (43-132)||(25453218-25453307)
chr7 (47-135)||(39274957-39275045)
chr7 (40-133)||(12228474-12228567)
chr7 (40-132)||(33808413-33808505)
chr7 (44-128)||(46204515-46204599)
chr7 (40-131)||(18087584-18087675)
chr7 (44-135)||(23058516-23058607)
chr7 (41-135)||(33828219-33828313)
chr7 (40-133)||(5455916-5456009)
chr7 (39-151)||(22081803-22081919)
chr7 (39-135)||(27138184-27138280)
chr7 (40-131)||(4226216-4226307)
chr7 (40-131)||(32688464-32688555)
chr7 (42-135)||(43124400-43124493)
chr7 (40-131)||(18086380-18086471)
chr7 (42-133)||(18855902-18855993)
chr7 (40-131)||(12644051-12644142)
chr7 (40-131)||(45914615-45914706)
chr7 (89-131)||(2640269-2640311)
chr7 (89-131)||(6571243-6571285)
chr7 (89-131)||(42731714-42731756)
chr7 (90-131)||(37657146-37657187)
chr7 (43-99)||(4227093-4227149)
chr7 (42-98)||(22661481-22661537)
chr7 (42-98)||(27480111-27480167)
chr7 (40-131)||(13384593-13384684)
chr7 (44-131)||(32687488-32687575)
chr7 (89-131)||(17102284-17102326)
chr7 (89-131)||(22871399-22871441)
chr7 (89-131)||(24389080-24389122)
chr7 (89-131)||(27992003-27992045)
chr7 (93-131)||(28469101-28469139)
chr7 (90-131)||(6253736-6253777)
chr7 (82-131)||(42019688-42019737)
chr7 (42-86)||(27480667-27480711)
chr7 (89-129)||(32298863-32298903)
chr7 (40-99)||(12643223-12643282)
chr7 (40-99)||(47558153-47558212)
chr7 (89-131)||(3914433-3914475)
chr7 (89-131)||(17885719-17885761)
chr7 (89-131)||(17886785-17886827)
chr7 (89-131)||(27396720-27396762)
chr7 (89-131)||(32053234-32053276)
chr7 (89-131)||(32680686-32680728)
chr7 (82-131)||(10936082-10936131)
chr7 (40-84)||(47945486-47945530)
chr7 (40-84)||(47950916-47950960)
chr7 (89-135)||(3914225-3914271)
chr7 (89-135)||(13044759-13044805)
chr7 (89-131)||(22827085-22827127)
chr7 (93-131)||(48788894-48788932)
chr7 (89-134)||(13386042-13386087)
chr7 (44-84)||(29144232-29144272)
[»] chr3 (77 HSPs)
chr3 (1-151)||(3469266-3469421)
chr3 (1-135)||(40788625-40788759)
chr3 (2-135)||(29118744-29118877)
chr3 (1-135)||(11910786-11910920)
chr3 (1-135)||(29686028-29686162)
chr3 (6-135)||(52032225-52032354)
chr3 (1-135)||(32306511-32306645)
chr3 (12-151)||(37778489-37778633)
chr3 (11-135)||(47551580-47551704)
chr3 (39-151)||(35643917-35644034)
chr3 (1-109)||(3596314-3596422)
chr3 (39-135)||(29118625-29118721)
chr3 (1-135)||(10294654-10294781)
chr3 (40-135)||(13948867-13948962)
chr3 (39-151)||(3469443-3469560)
chr3 (39-135)||(41422059-41422155)
chr3 (43-132)||(3596199-3596288)
chr3 (39-151)||(10307618-10307735)
chr3 (41-151)||(32306669-32306784)
chr3 (1-85)||(43998350-43998434)
chr3 (39-135)||(52032382-52032478)
chr3 (39-135)||(10294803-10294898)
chr3 (40-132)||(40788510-40788602)
chr3 (39-135)||(43998232-43998328)
chr3 (40-135)||(9368547-9368642)
chr3 (39-151)||(29686184-29686300)
chr3 (40-131)||(32716340-32716431)
chr3 (42-133)||(47857493-47857584)
chr3 (1-59)||(13948985-13949043)
chr3 (40-133)||(43608728-43608821)
chr3 (42-98)||(1757224-1757280)
chr3 (40-84)||(35759047-35759091)
chr3 (40-131)||(29192126-29192217)
chr3 (89-131)||(23458070-23458112)
chr3 (89-131)||(26463723-26463765)
chr3 (89-131)||(40758405-40758447)
chr3 (89-131)||(46475076-46475118)
chr3 (42-99)||(2944036-2944093)
chr3 (42-131)||(32717025-32717114)
chr3 (42-98)||(1756674-1756730)
chr3 (42-98)||(2944586-2944642)
chr3 (42-98)||(37249718-37249774)
chr3 (42-98)||(45278668-45278724)
chr3 (42-98)||(45279204-45279260)
chr3 (42-98)||(48189019-48189075)
chr3 (42-97)||(11026552-11026607)
chr3 (89-131)||(2796409-2796451)
chr3 (41-135)||(4322678-4322772)
chr3 (40-129)||(6956341-6956431)
chr3 (89-131)||(33689472-33689514)
chr3 (89-131)||(36417983-36418025)
chr3 (93-131)||(42343030-42343068)
chr3 (89-127)||(43384578-43384616)
chr3 (89-131)||(51994042-51994084)
chr3 (89-131)||(55052370-55052412)
chr3 (90-131)||(40033597-40033638)
chr3 (41-98)||(43105357-43105414)
chr3 (82-131)||(53757011-53757060)
chr3 (1-37)||(10307560-10307596)
chr3 (42-98)||(37249323-37249379)
chr3 (42-133)||(47856476-47856567)
chr3 (42-98)||(48188502-48188558)
chr3 (40-99)||(29192911-29192970)
chr3 (92-131)||(36417779-36417818)
chr3 (89-131)||(9294049-9294091)
chr3 (89-131)||(10770581-10770623)
chr3 (93-131)||(19741014-19741052)
chr3 (89-131)||(36314389-36314431)
chr3 (47-81)||(41989541-41989575)
chr3 (89-131)||(48322468-48322510)
chr3 (44-133)||(1078625-1078714)
chr3 (98-135)||(33506252-33506289)
chr3 (50-131)||(41558138-41558219)
chr3 (90-134)||(35712119-35712163)
chr3 (42-86)||(43105754-43105798)
chr3 (92-131)||(21185993-21186032)
chr3 (42-99)||(11026060-11026117)
[»] chr2 (45 HSPs)
chr2 (1-151)||(15604544-15604699)
chr2 (1-135)||(8710673-8710807)
chr2 (1-135)||(11830451-11830585)
chr2 (1-135)||(41587321-41587455)
chr2 (39-135)||(8342274-8342370)
chr2 (40-151)||(15604405-15604521)
chr2 (39-135)||(41588301-41588397)
chr2 (33-132)||(6588773-6588872)
chr2 (1-135)||(8342392-8342518)
chr2 (42-133)||(39936495-39936586)
chr2 (61-151)||(28226009-28226104)
chr2 (40-131)||(25623379-25623470)
chr2 (43-133)||(202605-202695)
chr2 (40-131)||(25624351-25624442)
chr2 (42-132)||(3555340-3555430)
chr2 (89-131)||(15848383-15848425)
chr2 (89-131)||(34448090-34448132)
chr2 (89-131)||(44713886-44713928)
chr2 (40-85)||(8710605-8710650)
chr2 (90-131)||(13692516-13692557)
chr2 (42-99)||(29958467-29958524)
chr2 (90-131)||(36755384-36755425)
chr2 (42-98)||(20983181-20983237)
chr2 (42-98)||(21103205-21103261)
chr2 (42-133)||(199097-199188)
chr2 (89-128)||(22051088-22051127)
chr2 (89-131)||(6658142-6658184)
chr2 (89-131)||(10713018-10713060)
chr2 (89-131)||(11163145-11163187)
chr2 (89-131)||(16099319-16099361)
chr2 (40-130)||(25230194-25230284)
chr2 (89-131)||(36382422-36382464)
chr2 (89-131)||(36480013-36480055)
chr2 (89-131)||(37895438-37895480)
chr2 (89-131)||(39423810-39423852)
chr2 (42-99)||(29957940-29957997)
chr2 (42-98)||(20982648-20982704)
chr2 (89-131)||(1695831-1695873)
chr2 (89-131)||(9076362-9076404)
chr2 (89-131)||(39498574-39498616)
chr2 (89-131)||(45556342-45556384)
chr2 (88-132)||(30729711-30729755)
chr2 (89-131)||(13995764-13995806)
chr2 (89-131)||(41248650-41248692)
chr2 (91-131)||(14900574-14900614)
[»] chr1 (70 HSPs)
chr1 (1-151)||(40714510-40714665)
chr1 (1-151)||(49955413-49955568)
chr1 (1-135)||(8898604-8898738)
chr1 (1-132)||(28324894-28325025)
chr1 (1-135)||(31058262-31058396)
chr1 (1-135)||(35038542-35038676)
chr1 (1-135)||(45750047-45750181)
chr1 (39-135)||(7371377-7371473)
chr1 (39-151)||(49955590-49955707)
chr1 (39-135)||(35040857-35040953)
chr1 (39-135)||(45749929-45750025)
chr1 (45-132)||(37929508-37929595)
chr1 (39-151)||(12905902-12906019)
chr1 (39-135)||(40714687-40714782)
chr1 (39-151)||(17189020-17189137)
chr1 (43-151)||(20760752-20760865)
chr1 (39-135)||(8898760-8898856)
chr1 (54-135)||(31051037-31051118)
chr1 (39-135)||(28325047-28325143)
chr1 (45-135)||(30326583-30326673)
chr1 (40-133)||(32132393-32132486)
chr1 (40-135)||(5734096-5734191)
chr1 (89-131)||(1841754-1841796)
chr1 (89-131)||(6367857-6367899)
chr1 (89-135)||(7821041-7821087)
chr1 (89-131)||(14879266-14879308)
chr1 (89-131)||(40210461-40210503)
chr1 (89-131)||(48779414-48779456)
chr1 (89-134)||(34464537-34464582)
chr1 (90-131)||(35152639-35152680)
chr1 (91-131)||(13914159-13914199)
chr1 (42-98)||(46282195-46282251)
chr1 (42-98)||(49093165-49093221)
chr1 (42-98)||(49093733-49093789)
chr1 (42-86)||(50062868-50062912)
chr1 (40-131)||(5734957-5735048)
chr1 (88-131)||(37578283-37578326)
chr1 (89-131)||(183312-183354)
chr1 (89-131)||(1103756-1103798)
chr1 (89-131)||(4960804-4960846)
chr1 (93-131)||(17661942-17661980)
chr1 (89-131)||(26024687-26024729)
chr1 (89-131)||(30711622-30711664)
chr1 (89-131)||(49723021-49723063)
chr1 (90-131)||(7821250-7821291)
chr1 (90-131)||(24009666-24009707)
chr1 (90-131)||(36694373-36694414)
chr1 (90-131)||(36710474-36710515)
chr1 (90-131)||(41099029-41099070)
chr1 (42-98)||(46282713-46282769)
chr1 (42-98)||(50062327-50062383)
chr1 (40-99)||(13295258-13295317)
chr1 (90-129)||(43759118-43759157)
chr1 (89-131)||(19017720-19017762)
chr1 (89-131)||(23209452-23209494)
chr1 (89-131)||(24905258-24905300)
chr1 (93-131)||(32917559-32917597)
chr1 (89-131)||(40772767-40772809)
chr1 (41-131)||(46899152-46899242)
chr1 (41-131)||(46899847-46899937)
chr1 (90-131)||(28011633-28011674)
chr1 (1-46)||(30326701-30326746)
chr1 (90-131)||(35473722-35473763)
chr1 (91-131)||(19322983-19323023)
chr1 (91-131)||(19323189-19323229)
chr1 (95-131)||(47999214-47999250)
chr1 (89-131)||(7231544-7231586)
chr1 (89-135)||(30711414-30711460)
chr1 (105-134)||(32558416-32558445)
chr1 (89-133)||(32133219-32133262)
[»] chr6 (47 HSPs)
chr6 (1-135)||(7160891-7161025)
chr6 (1-135)||(15913753-15913887)
chr6 (1-151)||(21836097-21836251)
chr6 (1-135)||(22502979-22503113)
chr6 (1-135)||(31407083-31407217)
chr6 (1-135)||(7905448-7905582)
chr6 (1-132)||(12065310-12065441)
chr6 (40-135)||(22502861-22502956)
chr6 (39-135)||(21836273-21836369)
chr6 (39-135)||(6517589-6517685)
chr6 (1-128)||(10781248-10781379)
chr6 (39-151)||(7905309-7905426)
chr6 (39-132)||(31406968-31407061)
chr6 (39-135)||(15913635-15913731)
chr6 (43-135)||(7161051-7161143)
chr6 (39-135)||(10781401-10781497)
chr6 (40-135)||(8089530-8089625)
chr6 (41-131)||(20651101-20651191)
chr6 (89-131)||(21627804-21627846)
chr6 (89-131)||(30726054-30726096)
chr6 (89-131)||(30804156-30804198)
chr6 (89-131)||(33517829-33517871)
chr6 (42-98)||(14657129-14657185)
chr6 (42-98)||(33400090-33400146)
chr6 (89-131)||(17734287-17734329)
chr6 (89-131)||(30337713-30337755)
chr6 (42-99)||(4117467-4117524)
chr6 (90-131)||(12080932-12080973)
chr6 (46-131)||(20651899-20651984)
chr6 (89-131)||(3059551-3059593)
chr6 (89-131)||(11393099-11393141)
chr6 (89-131)||(11434893-11434935)
chr6 (89-131)||(32593581-32593623)
chr6 (89-131)||(33647246-33647288)
chr6 (90-131)||(14196706-14196747)
chr6 (42-99)||(14656603-14656660)
chr6 (43-86)||(3176304-3176347)
chr6 (80-131)||(11435955-11436006)
chr6 (66-132)||(139883-139949)
chr6 (66-132)||(147904-147970)
chr6 (42-84)||(1661350-1661392)
chr6 (41-131)||(13379729-13379819)
chr6 (42-99)||(33401045-33401103)
chr6 (82-151)||(33517600-33517674)
chr6 (42-99)||(4116922-4116979)
chr6 (90-131)||(25486044-25486085)
chr6 (95-131)||(22367516-22367552)
[»] chr5 (67 HSPs)
chr5 (1-151)||(17544253-17544408)
chr5 (1-135)||(20153123-20153257)
chr5 (1-151)||(33871544-33871698)
chr5 (39-135)||(17544135-17544231)
chr5 (39-135)||(33871426-33871522)
chr5 (43-135)||(21287904-21287996)
chr5 (39-135)||(22298629-22298725)
chr5 (40-132)||(11741763-11741855)
chr5 (39-135)||(20152868-20152963)
chr5 (53-135)||(8875536-8875618)
chr5 (61-135)||(21287830-21287904)
chr5 (40-99)||(22869728-22869787)
chr5 (39-109)||(20153031-20153101)
chr5 (82-131)||(8322692-8322741)
chr5 (40-131)||(22870380-22870471)
chr5 (89-131)||(5994184-5994226)
chr5 (89-131)||(6150715-6150757)
chr5 (89-131)||(11047732-11047774)
chr5 (89-131)||(14194514-14194556)
chr5 (89-131)||(16156946-16156988)
chr5 (1-51)||(22298747-22298797)
chr5 (89-131)||(28269513-28269555)
chr5 (89-131)||(39453594-39453636)
chr5 (89-131)||(43159109-43159151)
chr5 (82-131)||(27587403-27587452)
chr5 (42-98)||(20072245-20072301)
chr5 (42-98)||(20072789-20072845)
chr5 (42-98)||(36477296-36477352)
chr5 (42-98)||(39181716-39181772)
chr5 (41-84)||(21257408-21257451)
chr5 (93-131)||(186718-186756)
chr5 (89-131)||(3528964-3529006)
chr5 (89-131)||(6301838-6301880)
chr5 (89-131)||(11762012-11762054)
chr5 (89-131)||(13362318-13362360)
chr5 (89-131)||(13963124-13963166)
chr5 (89-131)||(17202694-17202736)
chr5 (89-131)||(19892399-19892441)
chr5 (89-131)||(20814226-20814268)
chr5 (89-131)||(21265234-21265276)
chr5 (89-131)||(27937144-27937186)
chr5 (89-131)||(32242537-32242579)
chr5 (93-131)||(35920319-35920357)
chr5 (89-131)||(38475124-38475166)
chr5 (89-130)||(5024111-5024152)
chr5 (90-131)||(5255108-5255149)
chr5 (90-131)||(38442363-38442404)
chr5 (42-98)||(16533545-16533601)
chr5 (42-98)||(36476889-36476945)
chr5 (42-86)||(39181193-39181237)
chr5 (89-131)||(6301634-6301676)
chr5 (89-131)||(6757956-6757998)
chr5 (89-131)||(16083238-16083280)
chr5 (89-131)||(18670460-18670502)
chr5 (89-131)||(19517902-19517944)
chr5 (42-99)||(20857055-20857113)
chr5 (89-131)||(24547281-24547323)
chr5 (89-131)||(29646453-29646495)
chr5 (89-131)||(35512409-35512451)
chr5 (90-131)||(10684234-10684275)
chr5 (42-98)||(16533017-16533073)
chr5 (91-131)||(41930782-41930822)
chr5 (9-52)||(20152991-20153034)
chr5 (89-128)||(28770963-28771002)
chr5 (42-99)||(20857466-20857524)
chr5 (88-151)||(14194717-14194785)
chr5 (92-132)||(30005243-30005283)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-135)||(2480-2614)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-135)||(11985-12119)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-151)||(221856-222010)
scaffold0006 (39-135)||(222032-222128)
[»] scaffold0388 (2 HSPs)
scaffold0388 (1-151)||(12444-12599)
scaffold0388 (39-151)||(12306-12422)
[»] scaffold0771 (2 HSPs)
scaffold0771 (40-135)||(1007-1102)
scaffold0771 (1-59)||(1125-1183)
[»] scaffold0775 (2 HSPs)
scaffold0775 (42-131)||(5053-5142)
scaffold0775 (43-134)||(6227-6318)
[»] scaffold0128 (1 HSPs)
scaffold0128 (44-132)||(19947-20035)
[»] scaffold0005 (1 HSPs)
scaffold0005 (89-131)||(37655-37697)
[»] scaffold0295 (1 HSPs)
scaffold0295 (89-131)||(2438-2480)
[»] scaffold0031 (1 HSPs)
scaffold0031 (89-131)||(69260-69302)
[»] scaffold0075 (1 HSPs)
scaffold0075 (89-131)||(14520-14562)
[»] scaffold0007 (1 HSPs)
scaffold0007 (89-131)||(2036-2078)
[»] scaffold0020 (1 HSPs)
scaffold0020 (89-131)||(139936-139978)
[»] scaffold0707 (1 HSPs)
scaffold0707 (102-131)||(6387-6416)


Alignment Details
Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 51859628 - 51859473
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  51859628 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtgattaag 51859529  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  51859528 ttggtcaaaggacgaaattttaaatgattaaataatgcaagggtaaattgccagga 51859473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 52573449 - 52573315
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  52573449 gaagacaggggtaaaaatgtcatttcatgaatggatgacgagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaag 52573350  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  52573349 ttggtcaaaggacgaaattttaaatgattaaacaa 52573315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27069131 - 27068976
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  27069131 gaagacagggataaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 27069032  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  27069031 ttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 27068976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10408094 - 10408249
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |  ||||||||||||    
T  10408094 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattctcatatcattttgctaatttgatgatgtggcagtgattaag 10408193  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  10408194 ttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 10408249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39666981 - 39667115
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||    
T  39666981 gaagacaagggtaaaaatgtcatttcacgaatggatgacgatggtatttttgtccattctcatgccattttgctaatttgatgacgtggcggtgattaag 39667080  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  39667081 ttggtcaaaagacgaaattttaaatgattaaacaa 39667115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 54858780 - 54858647
Alignment:
Q  2 aagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagt 101  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||| ||||||||||||||||||||||||||  |||||||||||||    
T  54858780 aagacaggggtaaaaatgtcatttcacgaatggatgatgagggtatttttgtctgttcccatgccattttgctaatttgatgacgtggcagtgattaagt 54858681  T
Q  102 tggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||||||||||||||||    
T  54858680 tggtcaaaggacgaaattttaaatgattaaacaa 54858647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27891805 - 27891671
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||   |||||||||||    
T  27891805 gaagacagaggtaaaaatgtcatttcacgaatggatgacgaggatatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaag 27891706  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  27891705 ttggtcaaaggacgaaattttaaatgattaaacaa 27891671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 45463279 - 45463412
Alignment:
Q  2 aagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagt 101  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  | |||||||||||    
T  45463279 aagacaggggtaaaaatgtcatttcacgaatggatgacgagggtgtttttgtccattcccatgccattttgctaatttgatgacgtggtagtgattaagt 45463378  T
Q  102 tggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| || |||||||||||||||||||||    
T  45463379 tggtcaaagaacaaaattttaaatgattaaacaa 45463412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22718144 - 22718278
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||   | ||||||||     
T  22718144 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgtcggtgattaaa 22718243  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  22718244 ttggtcaaatgacgaaattttaaatgattaaacaa 22718278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 39701130 - 39700999
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    ||||||||||    
T  39701130 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtgtttttgtccattcccatgccattttgctaatttgatgacgtgagagtgattaag 39701031  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||| |||||||||||| ||||||    
T  39701030 ttggtcaaaggatgaaattttaaataattaaa 39700999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9731417 - 9731551
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||| |||||||||||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  9731417 gaagacaagggtaaaaatgtcatttcacgaatagatgacgaggatatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaag 9731516  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    || ||||||| ||||||||||||||||||||||||    
T  9731517 ttagtcaaagaacgaaattttaaatgattaaacaa 9731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22987072 - 22986938
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||   | ||||||||     
T  22987072 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtctattcccatgtcattttgctaatttgatgacgtgtcggtgattaaa 22986973  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  22986972 ttggtcaaatgacgaaattttaaatgattaaacaa 22986938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 50504030 - 50504164
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||   | ||||||||||    
T  50504030 gaagacatgggtaaaaatgtcatttcaagaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacttgggagtgattaag 50504129  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    || ||||||||||||||||||||||||||||||||    
T  50504130 tttgtcaaaggacgaaattttaaatgattaaacaa 50504164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 50504008 - 50503912
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  50504008 cgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacggaattttaaatgattaaacaa 50503912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 54858803 - 54858920
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||     |    
T  54858803 cgagggtatttttgtccattcacatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 54858902  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  54858903 aagggtaaattgccagga 54858920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 52573471 - 52573567
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  52573471 cgagggtatttttgtccattctcatgccatattgctaatttgatgacgtggcagtgattaaattgatcaaaggacggaattttaaatgattaaacaa 52573567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 27069153 - 27069270
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   || |||||||| ||||||||| ||||||||||||||||||||||     |    
T  27069153 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaaattggtcaaaagacgaaattttaaatgattaaacaatgc 27069252  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  27069253 aagggtaaattgccagga 27069270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 45463256 - 45463139
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||   | ||||||||||||||||||| ||||||||||||||||||||||     |    
T  45463256 cgagggtatttttgtccattcccatgctattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgc 45463157  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  45463156 aagggtaaattgccagga 45463139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 39666959 - 39666863
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | ||||||||||||| || ||||||||||||||||||||||||||||    
T  39666959 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttgctcgaaggacgaaattttaaatgattaaacaa 39666863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 39701152 - 39701248
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||    
T  39701152 cgagggtatttttgtccattcccatactattttgctaatttgatgacttggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 39701248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 10408071 - 10407976
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||  |||||||||||||||||||||||||   | ||||||||||||| |||||||||||||||||||||||||||||||    
T  10408071 gagggtatttttgtccatttccatgccattttgctaatttgatgacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaa 10407976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 22718122 - 22718026
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||   |  ||||||||||||||||||||||||||||||||||||||||||||    
T  22718122 cgagggtatttttgtctattcttataccattttgctaatttgatgacttggtggtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 22718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 22987094 - 22987190
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||   |  ||||||||||||||||||||||||||||||||||||||||||||    
T  22987094 cgagggtatttttgtctattcttataccattttgctaatttgatgacttggtggtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 22987190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 51859658 - 51859745
Alignment:
Q  48 ttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||| |||||||||||||||||||||||||   | ||||||||||||| |||||||||||||||||||||||||||||||    
T  51859658 ttttgtccattcccatgccattttgctaatttgatgacttgggagtgattaagttgatcaaaggacgaaattttaaatgattaaacaa 51859745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 3032765 - 3032648
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| ||   || |||||||||||||||||| ||||||||||||||||||||||     |    
T  3032765 cgagtgtatttttgtccattcctatgccattttgctaatttgataacttggcggtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgc 3032666  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  3032665 aagggtaaattgccagga 3032648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 11524132 - 11524036
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||   |   ||||||||||||||||| |||||||||||||||||||||||||    
T  11524132 cgagggtatttttgtctattcccatgccattttgctaatttgatgacttggtgatgattaagttggtcaaatgacgaaattttaaatgattaaacaa 11524036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 5818024 - 5818114
Alignment:
Q  45 tatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||| |||| ||||||||||||||||||||| |||    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5818024 tatttttgtctattcccatgccattttgctaatttgaagacttgacagtgattaagttggtcaaaggatgaaattttaaatgattaaacaa 5818114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11524154 - 11524232
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaattt 79  Q
    ||||| |||||||||||| |||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  11524154 gaagataggggtaaaaatatcatttcatgaatggatgacgaggatatttttgtccattcccatgccattttgctaattt 11524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 32063582 - 32063675
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||  ||  | ||||| ||||||||||||||||||    
T  32063582 gagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcaataattaagtgcgtgcagggacggaattttaaatgattaaac 32063675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 23455136 - 23455077
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  23455136 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaa 23455077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 30641699 - 30641607
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    ||||||| |||||||||||| |||| |||||||||||||||||||||   |||| |||||| ||||  | ||||||||||||||||||||||||    
T  30641699 gagggtaattttgtccattcccatgacattttgctaatttgatgacgtgacagtaattaag-tggtgtagggacgaaattttaaatgattaaac 30641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 55867362 - 55867455
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||| ||||  ||| |||||||||||||||||||||  ||||||||||| | ||   | ||||||||||||||||||||||||||    
T  55867362 gggtatttttgtcaattccaatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaa 55867455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 148002 - 148092
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||   |||| ||||| | ||   | ||||||||||||||||||||||    
T  148002 agggcatttttgtccattttcatgccattttgctaatttgatgacgtgacagtaattaactgggctcatggacgaaattttaaatgattaa 148092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3032787 - 3032833
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtat 47  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  3032787 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtat 3032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 14802030 - 14802072
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14802030 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 14802072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 22923287 - 22923225
Alignment:
Q  73 ctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||   |||||||||| ||||||||| |||||||||||||||||||||||||    
T  22923287 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaa 22923225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 22927940 - 22927878
Alignment:
Q  73 ctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||   |||||||||| ||||||||| |||||||||||||||||||||||||    
T  22927940 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaa 22927878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 22984219 - 22984157
Alignment:
Q  73 ctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||   |||||||||| ||||||||| |||||||||||||||||||||||||    
T  22984219 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaa 22984157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 22997807 - 22997745
Alignment:
Q  73 ctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||   |||||||||| ||||||||| |||||||||||||||||||||||||    
T  22997807 ctaatttgatgacgtgtcagtgattaaattggtcaaatgacgaaattttaaatgattaaacaa 22997745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 46661209 - 46661251
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46661209 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 46661251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 23455609 - 23455666
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    |||||||||||||||||| |||| |||||||||||||||||||||  |||||||||||    
T  23455609 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaa 23455666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 40316909 - 40317002
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |  | ||| ||||||| |||  | ||||| ||||||||| ||||||||    
T  40316909 gagggtatttttgtccattcccatgtcattttgctaatttgatgatgtggtagtaattaagtaggtgtagggacggaattttaaaggattaaac 40317002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 40326983 - 40327076
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |  | ||| ||||||| |||  | ||||| ||||||||| ||||||||    
T  40326983 gagggtatttttgtccattcccatgtcattttgctaatttgatgatgtggtagtaattaagtaggtgtagggacggaattttaaaggattaaac 40327076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 51692815 - 51692856
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51692815 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 51692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 52815844 - 52815787
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  52815844 agggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 52815787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 1178174 - 1178134
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1178174 agtgattaagttggtcaaaggacgaaattttaaatgattaa 1178134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 38982516 - 38982572
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  38982516 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 38982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 52816343 - 52816399
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  52816343 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 52816399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 56556762 - 56556706
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  56556762 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 56556706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 147500 - 147442
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||  ||||| |||||    
T  147500 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagtaattaa 147442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 7452098 - 7452140
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  7452098 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 7452140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 11447977 - 11448070
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaag-gacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||| |  |||||||||||  |||  | || |||||||||||||||||||||||||    
T  11447977 gggtatttttgtcaattttcatgccattttgttaatttgatgatgtggcagtgattaa-ctggaaatagtgacgaaattttaaatgattaaacaa 11448070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 13058277 - 13058319
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  13058277 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 13058319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 17356058 - 17356016
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  17356058 gcagtgattaagttggtcaaatgacgaaattttaaatgattaa 17356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 27149298 - 27149356
Alignment:
Q  98 aagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  27149298 aagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 27149356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 37976282 - 37976244
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37976282 tgattaagttggtcaaaggacgaaattttaaatgattaa 37976244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 44967202 - 44967160
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  44967202 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 44967160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 49879340 - 49879298
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  49879340 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 49879298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 50418801 - 50418759
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  50418801 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 50418759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 50751745 - 50751839
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||| |||||||||||||| ||||| |||||| ||||||||||| |  |||||  |||||| |||  | ||||||| ||||||||||||||||||    
T  50751745 agggcatttttgtccattcccatgctattttgttaatttgatgatgtggcagtctttaagtgggttcagggacgaatttttaaatgattaaacaa 50751839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 53129639 - 53129597
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  53129639 gcagtgattaagttggtcaaagaacgaaattttaaatgattaa 53129597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 54086828 - 54086786
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  54086828 gcagtgattaagttggtcaaaggacaaaattttaaatgattaa 54086786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 34765512 - 34765471
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  34765512 cagtgattaagttgatcaaaggacgaaattttaaatgattaa 34765471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 52909549 - 52909590
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  52909549 cagtgattaagttggtcaaaggacgaaattttaaataattaa 52909590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 36008975 - 36008935
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  36008975 agtgattaagttggtcaaaggactaaattttaaatgattaa 36008935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 38814247 - 38814303
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| || |||||| |||||||||||||||||||||  ||||||||||    
T  38814247 gggtatttttgtcaatgctcatgtcattttgctaatttgatgacgtggcagtgatta 38814303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 39538262 - 39538170
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||| || |  |||| |||||||||||||||||||||   ||| |||||| | | | || |||||||||||||||||||||||    
T  39538262 gagggtatttttgttcaattacatgtcattttgctaatttgatgacgtgacagcgattaattagattaagggacgaaattttaaatgattaaa 39538170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 56557245 - 56557301
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||  ||||||||||    
T  56557245 gggtatttttgtcaattcctatgccattttgctaatttgatgacgtggcagtgatta 56557301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 35028128 - 35028089
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35028128 gtgattaagttggtcaaaagacgaaattttaaatgattaa 35028089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 1179095 - 1179137
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  1179095 gcagtgattaagttggttaaaggatgaaattttaaatgattaa 1179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 4982859 - 4982817
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  4982859 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 4982817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 22567063 - 22567105
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  22567063 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 22567105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 24711375 - 24711417
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  24711375 gcagtgattaaattggtcaaatgacgaaattttaaatgattaa 24711417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 27934795 - 27934837
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  27934795 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 27934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 43155662 - 43155620
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  43155662 gcagtgattaagttggtcaaatgactaaattttaaatgattaa 43155620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 53702111 - 53702149
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  53702111 tgattaagttggtcaaatgacgaaattttaaatgattaa 53702149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 9400651 - 9400610
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  9400651 cagtgattaagttggtccaaggaccaaattttaaatgattaa 9400610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 30642441 - 30642485
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  30642441 gcagtcattaagtgggtcaagggacgaaattttaaatgattaaac 30642485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 8438410 - 8438371
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  8438410 gtgattaagtgggtcaagggacgaaattttaaatgattaa 8438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 8439522 - 8439561
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  8439522 gtgattaagtgggtcaagggacgaaattttaaatgattaa 8439561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 18831615 - 18831654
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  18831615 gtgattaagttggtcaaatgatgaaattttaaatgattaa 18831654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 23613575 - 23613614
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgatta 130  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  23613575 agtgattaagttggtcaaagaactaaattttaaatgatta 23613614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 39539213 - 39539256
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||    
T  39539213 gcagtcattaactgggtcaaaggacgaaattttaaatgattaaa 39539256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 9144899 - 9144857
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||| |||||| |||||||||||||||||    
T  9144899 gcagtgattaatttggtccaaggaccaaattttaaatgattaa 9144857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 15507802 - 15507768
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatga 127  Q
    |||||||||||||||||||||||||||| ||||||    
T  15507802 tgattaagttggtcaaaggacgaaatttgaaatga 15507768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 16006102 - 16006143
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  16006102 gcagtgattaagttggt-aaaggactaaattttaaatgattaa 16006143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 37248504 - 37248542
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  37248504 tgattaaattggtcaaaggacgaaatttaaaatgattaa 37248542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 38012434 - 38012476
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||    
T  38012434 gcagtgattaatttggtcaaaggaccaaattttaaacgattaa 38012476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 35508372 - 35508332
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  35508372 cagtgattaagttggtcaaa-gacaaaattttaaatgattaa 35508332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 38813731 - 38813678
Alignment:
Q  45 tatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    |||||||||| |||| |||| |||||||||||||||| ||||  ||||||||||    
T  38813731 tatttttgtcaattcccatgtcattttgctaatttgaagacgtggcagtgatta 38813678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 24350741 - 24350769
Alignment:
Q  103 ggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||    
T  24350741 ggtcaaaggacgaaattttaaatgattaa 24350769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 119
Target Start/End: Original strand, 24411655 - 24411683
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaatt 119  Q
    |||||||||||||||||||||||||||||    
T  24411655 agtgattaagttggtcaaaggacgaaatt 24411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 54713748 - 54713720
Alignment:
Q  103 ggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||    
T  54713748 ggtcaaaggacgaaattttaaatgattaa 54713720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 7e-61; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15230136 - 15230270
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  15230136 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 15230235  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  15230236 ttggtcaaaggacgaaattttaaatgattaaacaa 15230270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25124768 - 25124902
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||    
T  25124768 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaag 25124867  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||| |||||||| ||||||||||||||||||||||    
T  25124868 ttgttcaaaggatgaaattttaaatgattaaacaa 25124902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44664729 - 44664595
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||    
T  44664729 gaagacaggggtaaaaatgtcatttcacgaatggatgacgaggatatttttgtccattcccgtgccattttgctaatttgatgacgtggcagtgattaag 44664630  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  44664629 ttggtcaaatgacgaaattttaaatgattaaacaa 44664595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 41353779 - 41353909
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||   | |||||||||    
T  41353779 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagg-tatttttgtccattctcatgtcattttgctaatttgatgacgtgacggtgattaag 41353877  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  41353878 ttggtcaaaggacgaaattttaaatgattaaa 41353909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21432898 - 21433032
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||| |||   |||||||||||    
T  21432898 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttatccattcccatgtcattttgctaatttgataacgtgtcagtgattaag 21432997  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||| ||| |||||||||||||||    
T  21432998 ttggtcaaaggacgacattgtaaatgattaaacaa 21433032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 42945325 - 42945453
Alignment:
Q  7 aggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtc 106  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||   ||||||||||||||||||    
T  42945325 aggggtaaaaatgtcattacaagaatggatgacgagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtc 42945424  T
Q  107 aaaggacgaaattttaaatgattaaacaa 135  Q
    ||| |||||||||||||||||||||||||    
T  42945425 aaatgacgaaattttaaatgattaaacaa 42945453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 6471911 - 6471756
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||| |||| |||||||||||||||||||||  ||||||||||||    
T  6471911 gaagacaggggtaaaaatgtcattttacgaatggatgacgaggatatttttatccattcccatgtcattttgctaatttgatgacgtggcagtgattaag 6471812  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||| | ||| ||||||||||||||||||||||     |||||||||||||||||||    
T  6471811 ttgataaaaagacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 6471756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 37542433 - 37542564
Alignment:
Q  5 acaggggtaaaa-atgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttg 103  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||  ||||||  | |||||||||||||    
T  37542433 acaggggtaaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattctaatgtcattttgctaattcaatgacgttggagtgattaagttg 37542532  T
Q  104 gtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||||||||||||||    
T  37542533 gtcaaaggacgaaattttaaatgattaaacaa 37542564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27500293 - 27500423
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||| ||||| ||||| ||||||||||||||   |||||||||||    
T  27500293 gaagacaggggtaaaaatatcaattcacgaatggatgacgagggtatttttgcccattcccatgcaatttttctaatttgatgacgtgacagtgattaag 27500392  T
Q  101 ttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||| || ||||||||||||||||||    
T  27500393 ttggtcaaatgatgaaattttaaatgattaa 27500423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 10445578 - 10445695
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||     |    
T  10445578 cgagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgc 10445677  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  10445678 aagggtaaattgccagga 10445695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 42945297 - 42945201
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  42945297 cgagggtatttttgtccattcccatgccattttactaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 42945201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 35634343 - 35634438
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||    
T  35634343 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggttaaaggacgaaattttaaatgattaaacaa 35634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 15230113 - 15229997
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----ca 134  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||   | ||||||||||||| ||||||||||||||||||||||||||||     ||    
T  15230113 gagggtatttttgtccattcccatgccattttgctaatttgataacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatcca 15230014  T
Q  135 agggtaaattgccagga 151  Q
    |||||||||||||||||    
T  15230013 agggtaaattgccagga 15229997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 39474728 - 39474633
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  39474728 cgagggtatttttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaa-gacgaaattttaaatgattaaacaa 39474633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 8997943 - 8998028
Alignment:
Q  50 ttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||    
T  8997943 ttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaagttggtcaaaggacggaattttaaatgattaaacaa 8998028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 37542407 - 37542290
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||   || ||||||||||||||||||| |||||||||||||||||||||     |    
T  37542407 cgagggtatttttgttcattcccatgccattttgttaatttgatgacttggcggtgattaagttggtcaaagaacgaaattttaaatgattaaacaatgc 37542308  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  37542307 aagggtaaattgccagga 37542290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 38003667 - 38003740
Alignment:
Q  9 gggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgat 82  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  38003667 gggtaaaaatgtcatttcacgaatggatggcgatggtatttttgtctattctcatgccattttgctaatttgat 38003740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 34177216 - 34177308
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |  ||||| ||||||| |||||| |||||||||||||||||||||||    
T  34177216 gagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaa 34177308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 38003638 - 38003542
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||   || |||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||    
T  38003638 cgagggtatttttgtccatttctataccattttgctaatttgatgacttagtagtgattaagttggtcaaagaacgaaattttaaatgattaaacaa 38003542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 25124746 - 25124629
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    |||| ||||||||||| |||| |||  ||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||     |    
T  25124746 cgagagtatttttgtcaattcccatatcattttgctaatttgatgacttggcagtggttaagttggtcaaaggacgaaattttaaatgattaaacaatgc 25124647  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  25124646 aagggtaaattgccagga 25124629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 21432872 - 21432780
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||  |||||||||||||||||||||||||   | |||||||||||| |||||| |||||||||||||||||||||||||    
T  21432872 ggtatttttgtccatttccatgccattttgctaatttgatgacttgggagtgattaagttagtcaaaagacgaaattttaaatgattaaacaa 21432780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 44664751 - 44664847
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||   ||| |||||||||||||||||  ||||||||||||||||||||||||    
T  44664751 cgaggatatttttgtccattcccatgccattttgctaatctgatgacttggcaatgattaagttggtcaaataacgaaattttaaatgattaaacaa 44664847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 2535800 - 2535889
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||| ||||||||||| |||||||||||| |  ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  2535800 gtatttttgtccattcccatgccattttactaatttgatgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaac 2535889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7983633 - 7983702
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattt 70  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  7983633 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgttcattcccatgccattt 7983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 6471933 - 6472029
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||| ||||| |||||| ||||||||| ||   | ||||||||||||||||||||||| |||||||||||||||||||||    
T  6471933 cgagggtatttttgtcaattcccatgctattttgttaatttgataacttggtagtgattaagttggtcaaaggacaaaattttaaatgattaaacaa 6472029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 7983606 - 7983494
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caaggg 138  Q
    ||||||||||||||| ||||| |||||| |||||||||||||   | ||||||||||||  ||||||||||||||||||||||||||||     ||||||    
T  7983606 gtatttttgtccattttcatgtcatttttctaatttgatgactttgtagtgattaagtttttcaaaggacgaaattttaaatgattaaacaatgcaaggg 7983507  T
Q  139 taaattgccagga 151  Q
    |||||||||||||    
T  7983506 taaattgccagga 7983494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 41353757 - 41353661
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||| ||   | ||||||||||||| ||||| |||||||||||||||||||||||||    
T  41353757 cgagggtatatttgtccattctcatgtcattttgttaatttgataacttggtagtgattaagttgctcaaatgacgaaattttaaatgattaaacaa 41353661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 7294283 - 7294191
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||| |||||||||||||||| |||||||||||||||||||||||     |||||||||| | |||||||||| |||||||||||||||||||    
T  7294283 gaggttatttttgtccattcttatgccattttgctaatttgatgatctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaa 7294191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 27500271 - 27500176
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||     ||||||||||||| ||||| || ||||||||| ||||||||||||    
T  27500271 cgagggtatttttgtccattctcatgtcattttgctaatttgatgacttgatagtgattaagttgctcaaa-gatgaaattttatatgattaaacaa 27500176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 34176621 - 34176531
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||| ||| || ||||||||||||||||||||||    |||||||||| | |||||||||| |||||||||||||||||||    
T  34176621 gggtatttttgtcctttcccaagccattttgctaatttgatgacctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaa 34176531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 34666461 - 34666517
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  34666461 gggtatttttgtcaattctcatgccattttgctaatttgatgacgtggcagtgatta 34666517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 8316786 - 8316744
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8316786 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 8316744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 23663678 - 23663636
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23663678 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 23663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 36928771 - 36928813
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36928771 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 36928813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 38862858 - 38862900
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38862858 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 38862900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 39071937 - 39071979
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39071937 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 39071979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 234035 - 234100
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||    
T  234035 agtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 234100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 710446 - 710511
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||    
T  710446 agtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 710511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 747658 - 747723
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||    
T  747658 agtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 747723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 871553 - 871618
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||    
T  871553 agtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 871618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 2534875 - 2534782
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||| |||  ||| |||||||||||||||||||| |  ||||||||||| | ||   | ||||||||||||||||||||||||||    
T  2534875 gggtatttttgtcaatttccataccattttgctaatttgatgatgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaa 2534782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 11762020 - 11761963
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  11762020 gggtatttttgtccattcccatgctattttgctaatttgatgacgtggcagtgattaa 11761963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 34213944 - 34213887
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  34213944 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaa 34213887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 34665950 - 34665894
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  34665950 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 34665894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 34061623 - 34061666
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  34061623 gcagtgattaacttggtcaaaggacgaaattttaaatgattaaa 34061666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 12273051 - 12273009
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  12273051 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 12273009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 35756877 - 35756919
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  35756877 gcagtgcttaagttggtcaaaggacgaaattttaaatgattaa 35756919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 12199082 - 12199041
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  12199082 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 12199041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 12443510 - 12443469
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  12443510 cagtgattaaattggtcaaaggacgaaattttaaatgattaa 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 34685554 - 34685595
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  34685554 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 34685595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 34214448 - 34214504
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |  ||||||||||    
T  34214448 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgatta 34214504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 1425182 - 1425144
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1425182 tgattaagttggtcaaaggactaaattttaaatgattaa 1425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 11674958 - 11675000
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  11674958 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 11675000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 13186354 - 13186396
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  13186354 gcagtgattaacttggtcaaatgacgaaattttaaatgattaa 13186396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 23698442 - 23698400
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  23698442 gcagtgattaaattggtcaaaggacgaaattttaactgattaa 23698400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 36325498 - 36325540
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  36325498 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 36325540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 40318097 - 40318055
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  40318097 gcagtgattaagttggtcaaatgacgcaattttaaatgattaa 40318055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 36186233 - 36186192
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  36186233 cagtgattaagttggtcaaaagacgaaattttaaataattaa 36186192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 38955968 - 38956009
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  38955968 cagtgattaagttgatcaaaggactaaattttaaatgattaa 38956009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 4994788 - 4994748
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  4994788 agtgattaagttggtcaaaagacgaaattttaaataattaa 4994748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 31608646 - 31608604
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| |||||| ||||||||||||||| |||||    
T  31608646 gcagtgattaagtttgtcaaatgacgaaattttaaattattaa 31608604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 4405794 - 4405753
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||| |||| |||||    
T  4405794 cagtgattaagttggtcaaatgacgaaatttaaaataattaa 4405753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 39071816 - 39071763
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||| ||||||||||||| ||   | ||||||||||||||||||||||||||    
T  39071816 tgacgcggcagtgattaagtggggagagggacgaaattttaaatgattaaacaa 39071763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 16388692 - 16388652
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||| |||||| |||||||||||||| |||||    
T  16388692 agtgattaagttgatcaaagcacgaaattttaaataattaa 16388652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 23505183 - 23505143
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  23505183 agtgattaatttggtccaaggaccaaattttaaatgattaa 23505143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 23507722 - 23507762
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  23507722 agtgattaatttggtccaaggaccaaattttaaatgattaa 23507762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 40318278 - 40318326
Alignment:
Q  108 aaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    |||||||||||||||||||||||||     |||||||||||||||||||    
T  40318278 aaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 40318326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 11345 - 11500
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  11345 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 11444  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||| ||||||||||||||||||||||     |||||||||||||||||||    
T  11445 ttggtcaaaagacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 11323 - 11227
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  11323 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 11227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 5e-59; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 25628699 - 25628544
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  25628699 gaagataggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 25628600  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  25628599 ttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 25628544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22081780 - 22081646
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||    
T  22081780 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattctcatgccatttcgctaatttgatgacttggcagtgattaag 22081681  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||| |||||||||||||||||||||||||||||||    
T  22081680 ttgatcaaaggacgaaattttaaatgattaaacaa 22081646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 42618116 - 42618271
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  42618116 gaagacaggggtaaaaatgtcatttcatgaatggatgacgaggatatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaag 42618215  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  42618216 ttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 42618271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 46205514 - 46205648
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    ||||||||||    
T  46205514 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttcctaatttgatgacgtgatagtgattaag 46205613  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  46205614 ttggtcaaaggacgaaattttaaatgattaaacaa 46205648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32068301 - 32068435
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||||  ||||||||||||    
T  32068301 gaagacaggggtaaaaatgtcatttcatgaatggatgacgagggtctttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaag 32068400  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  32068401 ttggtcaaatgacgaaattttaaatgattaaacaa 32068435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10600154 - 10600288
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||    
T  10600154 gaagacaggggtaaaaatgtcatttcacaaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacatgacagtgattaag 10600253  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||| ||||||| |||||||||||||    
T  10600254 ttggtcaaaggacaaaattttgaatgattaaacaa 10600288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25453333 - 25453467
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||  || |||||||||    
T  25453333 gaagacaggggtaaaaatgtcatttcacaaatggatgacgaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcggtgattaag 25453432  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
     ||||||||||||||||| ||||||||||||||||    
T  25453433 ctggtcaaaggacgaaatgttaaatgattaaacaa 25453467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32934553 - 32934687
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| ||   |||||||||||    
T  32934553 gaagataggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgtcgtgacagtgattaag 32934652  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  32934653 ttggtcaaatgacgaaattttaaatgattaaacaa 32934687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23058634 - 23058789
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||  |||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||  ||||| ||||||    
T  23058634 gaagacaggggtaaaaatgtcattttgcgaatggatgacaagggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtaattaag 23058733  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaaca-----agggtaaattgccagga 151  Q
    ||||||||| ||||||||||||||||||||||||     |||||||||||||||||    
T  23058734 ttggtcaaatgacgaaattttaaatgattaaacaatgcgagggtaaattgccagga 23058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43266487 - 43266353
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |||||||| |||||||||||||   |||||||||||    
T  43266487 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgttcattcccataccattttgttaatttgatgacgtgacagtgattaag 43266388  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| || ||||||||||||||||||||||    
T  43266387 ttggtcaaatgatgaaattttaaatgattaaacaa 43266353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 43266509 - 43266605
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  43266509 cgagagtatttttgtccattctcatgtcattttgctaatttgatgacttagtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 43266605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 28890767 - 28890666
Alignment:
Q  34 gatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||||| |||||| |||||||||||||||||||||||    
T  28890767 gatgacgagggtatttttgtccattttcatgccattttgctaatttgatgacgtgacagtgattaagttagtcaaaagacgaaattttaaatgattaaac 28890668  T
Q  134 aa 135  Q
    ||    
T  28890667 aa 28890666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 25628721 - 25628817
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25628721 cgagggtagttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 25628817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 32934531 - 32934435
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  32934531 cgagggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 32934435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 42618094 - 42617998
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | ||||||||||||| |||||||||||||||||||||||||||||||    
T  42618094 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaa 42617998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 32068279 - 32068162
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||   ||| |||||||||||||||||| |||||||||||||||||||||     |    
T  32068279 cgagggtatttttgtcctttcccatgccattttgctaatttgatgacttggcattgattaagttggtcaaagtacgaaattttaaatgattaaacaatgc 32068180  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  32068179 aagggtaaattgccagga 32068162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 25453307 - 25453218
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||||||||| |||||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||    
T  25453307 ggtatttttgtccattcccatgcctttttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaa 25453218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 39275045 - 39274957
Alignment:
Q  47 tttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtc-aaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39275045 tttttgtccattctcatgccattt-gctaatttgatgacgtggcagtgattaagttggtcaaaaggacgaaattttaaatgattaaacaa 39274957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 12228567 - 12228474
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||   |||| ||||||| ||| ||| |||||||||||||||||||||||    
T  12228567 gagggtatttttgtccattctcatgccattttgttaatttgatgacgtgacagtcattaagtgggttaaacgacgaaattttaaatgattaaac 12228474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 33808505 - 33808413
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||  |||| |||||| | |||||| |||||||||||||||||||||||    
T  33808505 gagggtatttttgtccattcccatcccattttgctaatttgatgacggggcagcgattaactgggtcaatggacgaaattttaaatgattaaa 33808413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 46204599 - 46204515
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgat 128  Q
    |||||||||| ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  46204599 gtatttttgttcattcccatgccattttactaatttgatgacttagcagtgattaagttggtcaatggacgaaattttaaatgat 46204515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 18087584 - 18087675
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||| ||| || |||| |||||||||||||||||    
T  18087584 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtcattaagtgggttaagggacaaaattttaaatgattaa 18087675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 23058607 - 23058516
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||| ||||||||||||||||||||   |  | ||||||||||||||||||||||||||||||||||||||||||    
T  23058607 gtatttttgtccattcccatgacattttgctaatttgatgacttggtggcgattaagttggtcaaaggacgaaattttaaatgattaaacaa 23058516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 33828219 - 33828313
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||| |||||||||||| || ||||||||     |||||||||||||||||||| |||||||||||||||||||||||||    
T  33828219 agggtatttttgtccattcccatgccattttgttagtttgatgatttgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 33828313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 5456009 - 5455916
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||| |||  | ||| ||||||||||||||||||||    
T  5456009 gagggtatttttgtccattctcatgccattttgctaatttgatgatgtggcagtaattaagtgggtgtagggatgaaattttaaatgattaaac 5455916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 22081803 - 22081919
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||||||   ||| ||||||||||||||||| ||||||||||||||||||||||     |    
T  22081803 cgagggtatttt-gtccattcccataccatttggctaatttgatgacttggcaatgattaagttggtcaaatgacgaaattttaaatgattaaacaatgc 22081901  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  22081902 aagggtaaattgccagga 22081919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 27138184 - 27138280
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||||||   || ||||||||||||||||||| | ||||||||||||||||||||||    
T  27138184 cgagggtatttttgtccattcccatgttattttgttaatttgatgacttggcggtgattaagttggtcaaagaaagaaattttaaatgattaaacaa 27138280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 4226307 - 4226216
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||   ||   ||||||||||||||||||||||||    
T  4226307 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaaccgggaagaaggacgaaattttaaatgattaa 4226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 32688464 - 32688555
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||| |||  ||||| ||||||||||||||||||||  ||||| ||||||| |||||| ||||||||||||||||||||||    
T  32688464 gagggtatttttgtctatttccatgcaattttgctaatttgatgacgtggcagttattaagtgggtcaagggacgaaattttaaatgattaa 32688555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 43124400 - 43124493
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||| | ||   | ||||||||||||||||||||||||||    
T  43124400 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaa 43124493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 18086471 - 18086380
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||  |||||||||||||||||||||||||   ||||| ||||| | |||||| |||||||||||||| |||||||    
T  18086471 gagggtatttttgtccatttccatgccattttgctaatttgatgacatggcagtaattaactgggtcaagggacgaaattttaagtgattaa 18086380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 18855902 - 18855993
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||   |||| ||||||| ||| || ||||||||||||||||||||||||    
T  18855902 gggtatttttgtcctttcccatgctattttgctaatttgatgacgtgtcagtcattaagtgggttaagggacgaaattttaaatgattaaac 18855993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 12644051 - 12644142
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||   ||   | ||||||||||||||||||||||    
T  12644051 gagggcatttttgttcattctcatgccattttgctaatttgatgacgtggcagtgattaaccgggaagagggacgaaattttaaatgattaa 12644142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 45914706 - 45914615
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||  |||||||||||   ||   | ||||||||||||||||||||||    
T  45914706 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaa 45914615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 2640311 - 2640269
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2640311 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 2640269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 6571243 - 6571285
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6571243 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 6571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 42731714 - 42731756
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42731714 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 42731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 37657146 - 37657187
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37657146 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 37657187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 4227093 - 4227149
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  |||||||||||    
T  4227093 ggtatttttgtccattctcatgccattttgctaattttatgatgtggcagtgattaa 4227149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 22661537 - 22661481
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  22661537 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 22661481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 27480167 - 27480111
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  27480167 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 27480111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 13384684 - 13384593
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||   | ||| |||||||  ||  | ||||||||||||||||||||||    
T  13384684 gagggtatttttgtccattcccatgtcattttgttaatttgatgacatgggagtaattaagtgagtgtagggacgaaattttaaatgattaa 13384593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 32687575 - 32687488
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||| |||||||| ||||| |||||||||||||||||| |  ||||| ||| | | |||||| | ||||||||||||||||||||    
T  32687575 gtattttggtccattcccatgcaattttgctaatttgatgaagtggcagtcattgattgggtcaaggaacgaaattttaaatgattaa 32687488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 17102284 - 17102326
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  17102284 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 17102326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 22871441 - 22871399
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  22871441 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 22871399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 24389080 - 24389122
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  24389080 gcagtgattaagttggtcaaaggacaaaattttaaatgattaa 24389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 27992003 - 27992045
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  27992003 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 27992045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 28469139 - 28469101
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28469139 tgattaagttggtcaaaggacgaaattttaaatgattaa 28469101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 6253736 - 6253777
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6253736 cagtgattaagttggtcaaaggactaaattttaaatgattaa 6253777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 42019737 - 42019688
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  42019737 tgacgtagcagtgattaatttggtcaaagaacgaaattttaaatgattaa 42019688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 27480667 - 27480711
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacg 86  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  27480667 gggtatttttgtcaattcccatgccattttgctaatttgatgacg 27480711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 32298903 - 32298863
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgatt 129  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  32298903 gcagtgattaagttggtcaaatgacgaaattttaaatgatt 32298863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 12643282 - 12643223
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||||||||||  ||||||||  |||||||||||||||  |||||||||||    
T  12643282 gagggtatttttgtccattcctatgccattaagctaatttgatgacgtggcagtgattaa 12643223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 47558212 - 47558153
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    |||||||||||| ||||||| |||| |||||||||||||||||||||   ||||||||||    
T  47558212 gagggtatttttatccattcccatgacattttgctaatttgatgacgtgacagtgattaa 47558153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 3914433 - 3914475
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  3914433 gcagtgattaagttggtcaaatgatgaaattttaaatgattaa 3914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 17885761 - 17885719
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  17885761 gcagtgattaactgggtcaaaggacgaaattttaaatgattaa 17885719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 17886785 - 17886827
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  17886785 gcagtgattaagtgggtcaagggacgaaattttaaatgattaa 17886827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 27396762 - 27396720
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  27396762 gcagtgattaagttggtcaaatgatgaaattttaaatgattaa 27396720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 32053276 - 32053234
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  32053276 gcagtgattaagttggtcaaaagatgaaattttaaatgattaa 32053234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 32680728 - 32680686
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  32680728 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 32680686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 10936082 - 10936131
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||| ||| |||||||||||  ||||||||||||||||||||||||||    
T  10936082 tgacgcggcaatgattaagttgtccaaaggacgaaattttaaatgattaa 10936131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 47945530 - 47945486
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatga 84  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||    
T  47945530 gagggtatttttgtccattcctatgccattttgttaatttgatga 47945486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 47950960 - 47950916
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatga 84  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||    
T  47950960 gagggtatttttgtccattcctatgccattttgttaatttgatga 47950916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 3914271 - 3914225
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||   | ||||||||||||||||||||||||||    
T  3914271 gcagtgattaagttggaagagggacgaaattttaaatgattaaacaa 3914225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 13044805 - 13044759
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||| || || ||||||| ||||||||||||||||||    
T  13044805 gcagtgattaagtttgttaagggacgaatttttaaatgattaaacaa 13044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 22827127 - 22827085
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||| |||||| | ||||||||||||||||||||    
T  22827127 gcagtgattaagtgggtcaaggaacgaaattttaaatgattaa 22827085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 48788932 - 48788894
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  48788932 tgattaagttggtcaaatgatgaaattttaaatgattaa 48788894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 13386042 - 13386087
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 134  Q
    ||||||||||| | ||||||||||  ||||||||||||||||||||    
T  13386042 gcagtgattaactgggtcaaaggataaaattttaaatgattaaaca 13386087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 29144232 - 29144272
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatga 84  Q
    |||||||||||||||| ||| | ||||||||||||||||||    
T  29144232 gtatttttgtccattcccatacaattttgctaatttgatga 29144272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 5e-59; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 3469421 - 3469266
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||    
T  3469421 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggccgtgattaag 3469322  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  3469321 ttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 3469266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40788625 - 40788759
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  40788625 gaagactggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 40788724  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||| ||||||||||    
T  40788725 ttggtcaaaggacgaaattttaaaagattaaacaa 40788759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 29118744 - 29118877
Alignment:
Q  2 aagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagt 101  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||  |||||||||||||    
T  29118744 aagacgggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtctattcccatgccattttgctaatgtgatgacgtggcagtgattaagt 29118843  T
Q  102 tggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||||||||||||||||    
T  29118844 tggtcaaaggacgaaattttaaatgattaaacaa 29118877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11910920 - 11910786
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||||||||||||||||||| |||  | ||||||||||    
T  11910920 gaagacaggggtaaaaatgtcatttcacgaatggatgacgatgatatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaag 11910821  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  11910820 ttggtcaaaggacgaaattttaaatgattaaacaa 11910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 29686162 - 29686028
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||| |||    
T  29686162 gaagacagggataaaaatgtcatttcacgaatggatgacgagggtatttttctccattcccatgccattttgctaatttgatgacgtggcagtgatcaag 29686063  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||| ||||||||||||||||||||||||    
T  29686062 ttggtcaaagaacgaaattttaaatgattaaacaa 29686028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 52032354 - 52032225
Alignment:
Q  6 caggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggt 105  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||||||||  | |||||||||||||||    
T  52032354 caggggtaaaaatgtcatttcacgaatgaatgacgagggtatttttgtccattcccatgccattttgttaatttgatgacgtggtagtgattaagttggt 52032255  T
Q  106 caaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||||||||||||    
T  52032254 caaaggacgaaattttaaatgattaaacaa 52032225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 32306645 - 32306511
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||| || | |||||||||||||||||||||  | ||||||||||    
T  32306645 gaagacagcggtaaaaatatcatttcacgaatggatgacgaggatatttttgtccattcccaagtcattttgctaatttgatgacgtggtagtgattaag 32306546  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  32306545 ttggtcaaaggacgaaattttaaatgattaaacaa 32306511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 37778489 - 37778633
Alignment:
Q  12 taaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaagg 111  Q
    |||||| |||||||||| |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  37778489 taaaaaagtcatttcacaaatggatgacaagggtatttttgtctattctcatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaagg 37778588  T
Q  112 acgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    | |||||||||||||||||||     |||||||||||||||||||    
T  37778589 atgaaattttaaatgattaaacaatgcaagggtaaattgccagga 37778633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 47551704 - 47551580
Alignment:
Q  11 gtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaag 110  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  47551704 gtaaaaatgtcatttcacgaatggatgacgagggtaattttgtccatttccatgccattttgctaatttgatgatgtggcagtgattaagttggtcaaag 47551605  T
Q  111 gacgaaattttaaatgattaaacaa 135  Q
    || ||||||||||||||||||||||    
T  47551604 gatgaaattttaaatgattaaacaa 47551580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 35644034 - 35643917
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa--- 135  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||       
T  35644034 cgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagtttgtcaaaggacgaaattttaaatgattaaacaatgc 35643935  T
Q  136 --gggtaaattgccagga 151  Q
      ||||||||||||||||    
T  35643934 acgggtaaattgccagga 35643917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3596314 - 3596422
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||||||||   |||||||||||    
T  3596314 gaagacaggggtaaaaatgtcatttcacgaatgcatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaag 3596413  T
Q  101 ttggtcaaa 109  Q
    |||||||||    
T  3596414 ttggtcaaa 3596422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 29118721 - 29118625
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29118721 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 29118625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10294781 - 10294654
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||  |||| ||||||||||||||||||||      |||||||||    
T  10294781 gaagacaggggtaaaaatgtcatttcacgaat-gatgatgagggtatttttgtacatttccatgtcattttgctaatttgatgac------gtgattaag 10294689  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| |||||||||||||||||||||||||||||    
T  10294688 ttggttaaaggacgaaattttaaatgattaaacaa 10294654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 13948962 - 13948867
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13948962 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 13948867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 3469443 - 3469560
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | |||||||||||||||||||||||| |||||||||||||||||     |    
T  3469443 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacggaattttaaatgattaaacaatgc 3469542  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  3469543 aagggtaaattgccagga 3469560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 41422155 - 41422059
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||    
T  41422155 cgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 41422059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 3596288 - 3596199
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||| |||||||||||||||||||||    
T  3596288 ggtatttttgtccattctcatgccattttgctaatttgatgacatggtagtgattaagttggtcaaagaacgaaattttaaatgattaaa 3596199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 10307618 - 10307735
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||     |    
T  10307618 cgagggtatttttgtccattcccatgcaattttgctaattttatgacgtgcgagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 10307717  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  10307718 aagggtaaattgccagga 10307735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 32306669 - 32306784
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caa 135  Q
    |||||||||||||||||||  ||||||||||||||||||||||||   | ||||||||||||||||||| ||||||||||||||||||||||     |||    
T  32306669 agggtatttttgtccattcctatgccattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaa 32306768  T
Q  136 gggtaaattgccagga 151  Q
    ||||||||||||||||    
T  32306769 gggtaaattgccagga 32306784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43998350 - 43998434
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgac 85  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  43998350 gaagacatgggtaaaaatgtcatttcacgaatgaatgacgaggatatttttgtccattctcatggcattttgctaatttgatgac 43998434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 52032382 - 52032478
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||   |  ||||||||||||||||||||| ||||||||||||||||||||||    
T  52032382 cgagggtatttttgtccattcccatgtcattttgctaatttgatgacttggtggtgattaagttggtcaaaggaagaaattttaaatgattaaacaa 52032478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 10294803 - 10294898
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||   |||||||||||||||||||||  ||||||||||||||||||||||||    
T  10294803 cgagggtatttttgtccattcccatgccatttgg-taatttgatgacttggcagtgattaagttggtcaaaaaacgaaattttaaatgattaaacaa 10294898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 40788602 - 40788510
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    | ||||||||||||| ||||| ||||||||||||||||||||||    
T  40788602 gagggtatttttgtccattcccatgccattttgctaatttgatgatttggtagtgattaagttgatcaaatgacgaaattttaaatgattaaa 40788510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 43998328 - 43998232
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| |||||||| |||||| ||||||||||||| |||||||||||   | ||||||||||||||||||| |||||||||||||||||||||||||    
T  43998328 cgaggatatttttgaccattcccatgccattttgcgaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 43998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 9368547 - 9368642
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  ||| | ||||||| ||| || | ||||||||||||||||||||||||    
T  9368547 gagggtatttttgtccattctcatgccattttgttaatttgatgacgtggcaatcattaagtgggttaaggaacgaaattttaaatgattaaacaa 9368642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 29686184 - 29686300
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||   | ||||||||||||||||||| ||| ||||||||||||||||||     |    
T  29686184 cgagggtatttttgtccatttccatgccattttgctaattt-atgacttggtagtgattaagttggtcaaatgacaaaattttaaatgattaaacaatgc 29686282  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  29686283 aagggtaaattgccagga 29686300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 32716431 - 32716340
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||  |||   | ||||||||||||||||| ||||    
T  32716431 gagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaatctggaagagggacgaaattttaaatggttaa 32716340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 47857493 - 47857584
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||| ||||||| |||  |||| ||||||||||||| ||||||  ||| ||||||||||||||||| |||||||||||||||||||||||    
T  47857493 gggtatatttgtcctttcctatgctattttgctaattttatgacgtggcattgattaagttggtcaaatgacgaaattttaaatgattaaac 47857584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13948985 - 13949043
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattc 59  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13948985 gaagacaagggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattc 13949043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 43608728 - 43608821
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||||||  |||||||| |||||||||||||||   |||||| ||||| | |||  | ||||||||||||||||||||||||    
T  43608728 gagggtatttttgtccatttccatgccatcttgctaatttgatgatatagcagtaattaaataggtgtagggacgaaattttaaatgattaaac 43608821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 1757224 - 1757280
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  1757224 gggtatttttgtcaattctcatgccattttgctaatttgatgacgtggcagtgatta 1757280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 35759047 - 35759091
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatga 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35759047 gagggtatttttgtccattctcatgccattttgctaatttgatga 35759091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 29192217 - 29192126
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||  |||||||||||   ||   | ||||||||||||||||||||||    
T  29192217 gagggtatttttgtcaattctcatgtcattttgctaatttaatgacgtggcagtgattaatcgggaagagggacgaaattttaaatgattaa 29192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 23458112 - 23458070
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23458112 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 23458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 26463765 - 26463723
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26463765 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 26463723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 40758405 - 40758447
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40758405 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 40758447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 46475076 - 46475118
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46475076 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 46475118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 2944093 - 2944036
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  2944093 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaa 2944036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 32717025 - 32717114
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||  ||||| ||||| | ||   | ||||||||||||||||||||||    
T  32717025 gggtatttttgtccattcctatgtcattttgctaatttgatgacgtggcagtaattaattgggaagagggacgaaattttaaatgattaa 32717114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 1756730 - 1756674
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  1756730 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 1756674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 2944586 - 2944642
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  2944586 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 2944642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 37249718 - 37249774
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  37249718 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 37249774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 45278724 - 45278668
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  45278724 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 45278668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 45279204 - 45279260
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    |||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||    
T  45279204 gggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgatta 45279260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 48189019 - 48189075
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  48189019 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 48189075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 11026552 - 11026607
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatt 97  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||    
T  11026552 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatt 11026607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 2796409 - 2796451
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  2796409 gcagtgattaagttggtcaaaggacgaaattttaactgattaa 2796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 4322772 - 4322678
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||| |||||||||||||| ||||| |||||| ||||||||||| |  |||||  |||||| |||  | ||||||| ||||||||||||||||||    
T  4322772 agggcatttttgtccattcccatgctattttgttaatttgatgatgtggcagtctttaagtgggttcagggacgaatttttaaatgattaaacaa 4322678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 6956431 - 6956341
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatt-aagttggtcaaaggacgaaattttaaatgatt 129  Q
    |||||||||||||||||||| |||| ||||||| |||||| ||||||  ||||| ||| |||| |||  | ||||||||||||||||||||    
T  6956431 gagggtatttttgtccattcccatgtcattttgttaattttatgacgtggcagtaattaaagtgggtgtagggacgaaattttaaatgatt 6956341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 33689514 - 33689472
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  33689514 gcagtgattaagttggtcaaaggacaaaattttaaatgattaa 33689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 36417983 - 36418025
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  36417983 gcagtgattaagtttgtcaaaggacgaaattttaaatgattaa 36418025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 42343030 - 42343068
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42343030 tgattaagttggtcaaaggacgaaattttaaatgattaa 42343068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 43384578 - 43384616
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatga 127  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43384578 gcagtgattaagttggtcaaaggacgaaattttaaatga 43384616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 51994084 - 51994042
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  51994084 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 51994042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 55052412 - 55052370
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  55052412 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 55052370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 40033638 - 40033597
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  40033638 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 40033597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 43105414 - 43105357
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    |||||||||||||| |||| |||||||||||||||||||||||||   ||||||||||    
T  43105414 agggtatttttgtcaattcccatgccattttgctaatttgatgacatggcagtgatta 43105357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 53757011 - 53757060
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  53757011 tgacgcggtagtgattaagttggttaaaggacgaaattttaaatgattaa 53757060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10307596 - 10307560
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  10307596 gaagacaggggtaaaaatgtcatttcacgaatggatg 10307560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 37249379 - 37249323
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||  ||||||||||    
T  37249379 gggtatttttgtcaatttccatgccattttgctaatttgatgacgtggcagtgatta 37249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 47856567 - 47856476
Alignment:
Q  42 gggtatttttgtccattctc-atgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    ||||||||||||| ||| || |||| ||||||||||||| ||||||    | ||||||||||||||||| ||| |||||||||||||||||||    
T  47856567 gggtatttttgtc-attttctatgctattttgctaatttaatgacgtgaaattgattaagttggtcaaatgacaaaattttaaatgattaaac 47856476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 48188558 - 48188502
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||  ||||||||||    
T  48188558 gggtatttttgtcaattcccatggcattttgctaatttgatgacgtggcagtgatta 48188502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 29192911 - 29192970
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||   ||||||||||    
T  29192911 gagggtatttttgtcaattcccatgtcattttgctaatttgatgacgtgacagtgattaa 29192970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 36417818 - 36417779
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  36417818 gtgattaagtttgtcaaaggacgaaattttaaatgattaa 36417779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 9294091 - 9294049
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  9294091 gcagtgattaagttggtcaaaagacaaaattttaaatgattaa 9294049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 10770623 - 10770581
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  10770623 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 10770581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 19741052 - 19741014
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  19741052 tgattaaattggtcaaaggacgaaattttaaatgattaa 19741014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 36314431 - 36314389
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  36314431 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 36314389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 41989541 - 41989575
Alignment:
Q  47 tttttgtccattctcatgccattttgctaatttga 81  Q
    |||||||||||||||||||||||||||||||||||    
T  41989541 tttttgtccattctcatgccattttgctaatttga 41989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 48322510 - 48322468
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  48322510 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 48322468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 1078714 - 1078625
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||| | |||||| ||||||||||||||||    || | ||||| | |||  | ||||||||||||||||||||||||    
T  1078714 gtatttttgtccattcccgtgccatcttgctaatttgatgacatgacaataattaaatgggtgtagggacgaaattttaaatgattaaac 1078625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 135
Target Start/End: Original strand, 33506252 - 33506289
Alignment:
Q  98 aagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33506252 aagttggtcaaaggacaaaattttaaatgattaaacaa 33506289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 41558138 - 41558219
Alignment:
Q  50 ttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| ||| |||||||| ||||||||||| |  ||||| ||||| | ||   ||||||||||||||||||||||||    
T  41558138 ttgtccattcccataccattttgataatttgatgatgtggcagtaattaactgggctcaaggacgaaattttaaatgattaa 41558219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 35712163 - 35712119
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 134  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||    
T  35712163 cagtgattaactgggtcaaaagacgaaattttaaatgattaaaca 35712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 43105754 - 43105798
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacg 86  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||    
T  43105754 gggtatttttgtcaattccaatgccattttgctaatttgatgacg 43105798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 21185993 - 21186032
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  21185993 gtgattaagtgggtcaagggacgaaattttaaatgattaa 21186032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 11026117 - 11026060
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||  ||||| |||||||||||||||||||   |||||||||||    
T  11026117 gggtatttttgtcaatttccatgcgattttgctaatttgatgacatggcagtgattaa 11026060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15604544 - 15604699
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  15604544 gaaggcaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacggggcagtgattaag 15604643  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||    
T  15604644 ttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 15604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8710673 - 8710807
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||    
T  8710673 gaagacaggggtaaaaatgtcatttcacgaattgatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgataaag 8710772  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  8710773 ttggtcaaaggacgaaattttaaatgattaaacaa 8710807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11830585 - 11830451
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||    
T  11830585 gaagaaagggataaaaatgtcatttcatgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgag 11830486  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    || |||||| |||||||||||||||||||||||||    
T  11830485 tttgtcaaatgacgaaattttaaatgattaaacaa 11830451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41587455 - 41587321
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||| |||||||| |||||||||  || ||||||||||||||||| ||||| ||||||||||||||||||||   |||||||||||    
T  41587455 gaagacaggggtaaaaatatcatttcatgaatggatgatgacggtatttttgtccattcccatgcaattttgctaatttgatgacgtgacagtgattaag 41587356  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| |||||| ||||||||||||||||||||||    
T  41587355 ttggttaaaggatgaaattttaaatgattaaacaa 41587321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 8342370 - 8342274
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  8342370 cgagggtatttttgtcaattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 8342274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 15604521 - 15604405
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----ca 134  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||   | ||||||||||||| ||||||||||||||||||||||||||||     ||    
T  15604521 gagggtatttttgtccattcccatgccattttgctaatttcatgacttggtagtgattaagttgatcaaaggacgaaattttaaatgattaaacaatgca 15604422  T
Q  135 agggtaaattgccagga 151  Q
    |||||||||||||||||    
T  15604421 agggtaaattgccagga 15604405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 41588301 - 41588397
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||    
T  41588301 cgagggtatttttgtcaatttccatgccattttgctaatttgatgacttggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaa 41588397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 6588872 - 6588773
Alignment:
Q  33 ggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||   |||||||| || | ||||||||||||||||||||||||||||||    
T  6588872 ggatggtgagggtatttttgtccattcccatgccattttgctaatttgatgacctggcagtgatcaactgggtcaaaggacgaaattttaaatgattaaa 6588773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8342392 - 8342518
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||| || ||| |||| | ||| ||||||||||||||| |||||||        |||||||||||| ||||||||||||    
T  8342392 gaagacaggggtaaaaatgtcattttacaaatagatgacaaggttatttttgtccattcccatgcca--------atttgatgacgcggcagtgattaag 8342483  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||| ||||||||||||||||||||| |||||||||    
T  8342484 ttgttcaaaggacgaaattttaaataattaaacaa 8342518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 39936495 - 39936586
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||    
T  39936495 gggtatttttgtccttttccatgccattttgctaatttgatgacgtggcattgattaaattggtcaaaggacgaaattttaaatgattaaac 39936586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 28226009 - 28226104
Alignment:
Q  61 catgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    |||||||||||||||||||||||||   | |||||||||||||||||||| |||||||||||||||||||||     |||||||||||||||||||    
T  28226009 catgccattttgctaatttgatgacttggtagtgattaagttggtcaaagtacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 28226104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 25623470 - 25623379
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||   |||  | ||||||||||||||||||||||    
T  25623470 gagggtatttttgtccattcccatgccattttgttaatttgatgacgtggcagtgattaaccgggtagagggacgaaattttaaatgattaa 25623379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 202605 - 202695
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||| ||||||||||||||||||||||||||| |||  | ||| ||||||| |||  | ||||||||||||||||||||||||    
T  202605 ggtatttttgtctattctcatgccattttgctaatttgataacgtgggagtaattaagtgggtgtagggacgaaattttaaatgattaaac 202695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 25624351 - 25624442
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| |  |||||||||||   |||  | ||||||||||||||||||||||    
T  25624351 gagggtatttttgtccattcccatgccattttgttaatttgatgatgtggcagtgattaaccgggtagagggacgaaattttaaatgattaa 25624442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 3555430 - 3555340
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||| ||| | |||||||||||||||| |||||||||||    ||||||||||| | ||| ||||||||||||||||||||||||||    
T  3555430 gggtatttatgttctttctcatgccattttgttaatttgatgatctggcagtgattaactgggttaaaggacgaaattttaaatgattaaa 3555340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 15848383 - 15848425
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15848383 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 15848425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 34448090 - 34448132
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34448090 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 34448132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 44713928 - 44713886
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44713928 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 44713886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 8710650 - 8710605
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgac 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  8710650 gagggtatttttgtccattcccatgccattttgctaatttgatgac 8710605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 13692516 - 13692557
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13692516 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 13692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 29958467 - 29958524
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  29958467 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgattaa 29958524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 36755384 - 36755425
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36755384 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 36755425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 20983181 - 20983237
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  20983181 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 20983237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 21103261 - 21103205
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  21103261 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 21103205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 199188 - 199097
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||||||||||||||||| |||||  ||||| ||||||||||| |   |||| ||||||| ||| || |||| |||||||||||||||||||    
T  199188 gggtatttttgtccattcgcatgctcttttgttaatttgatgatgtgacagtcattaagtgggttaagggacaaaattttaaatgattaaac 199097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 22051127 - 22051088
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgat 128  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22051127 gcagtgattaagttggtcaaaggacgaaattttaaatgat 22051088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 6658142 - 6658184
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  6658142 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 6658184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 10713018 - 10713060
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  10713018 gcagtgattaagttggtcaaaggacgacattttaaatgattaa 10713060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 11163187 - 11163145
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  11163187 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 11163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 16099319 - 16099361
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16099319 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 16099361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 25230284 - 25230194
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgatta 130  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||| |  ||||| ||||| | ||   | |||||||||||||||||||||    
T  25230284 gagggtatttttgtccattcgcatgccattttgccaatctgatgatgtggcagtaattaactgggctcagggacgaaattttaaatgatta 25230194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 36382422 - 36382464
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  36382422 gcagtgattaagttggccaaaggacgaaattttaaatgattaa 36382464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 36480013 - 36480055
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  36480013 gcagtgattaagttggtcaaaggacgaaattttaaattattaa 36480055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 37895480 - 37895438
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  37895480 gcagtgattaagttggtcaaaggatgaaattttaaatgattaa 37895438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 39423810 - 39423852
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  39423810 gcagtgattaagttggtcaaaggacaaaattttaaatgattaa 39423852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 29957997 - 29957940
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||| |||||||    
T  29957997 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcaatgattaa 29957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 20982704 - 20982648
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||    
T  20982704 gggtatttttgtcaattcccataccattttgctaatttgatgacgtggcagtgatta 20982648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 1695873 - 1695831
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  1695873 gcagtgattaatttggtcaaaggaccaaattttaaatgattaa 1695831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 9076362 - 9076404
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  9076362 gcagtgattaagttggttaaatgacgaaattttaaatgattaa 9076404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 39498574 - 39498616
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  39498574 gcagtgattaagttggtcaaaggattaaattttaaatgattaa 39498616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 45556342 - 45556384
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  45556342 gcagtgattaagttggtcaaaggattaaattttaaatgattaa 45556384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 30729755 - 30729711
Alignment:
Q  88 agcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||| | |||||||||||||||||||||| |||||||    
T  30729755 agcagtgattaactgggtcaaaggacgaaattttaaacgattaaa 30729711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 13995806 - 13995764
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||    
T  13995806 gcagtgattaatttggtcaaaggaccaaattttaaacgattaa 13995764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 41248692 - 41248650
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||    
T  41248692 gcagtgattaatttggtcaaaggaccaaattttaaacgattaa 41248650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 14900614 - 14900574
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||| ||| |||||| |||||||||||||||||    
T  14900614 agtgattaagtttgtccaaggaccaaattttaaatgattaa 14900574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 5e-59; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40714665 - 40714510
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  40714665 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 40714566  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||| ||||||||||||||||||||||     |||||||||||||||||||    
T  40714565 ttggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 40714510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 49955568 - 49955413
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |  ||||||||||||    
T  49955568 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgatgtggcagtgattaag 49955469  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||| ||||||||||||||||||     |||||||||||||||||||    
T  49955468 ttggtcaaaggacaaaattttaaatgattaaacaatgcaagggtaaattgccagga 49955413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8898738 - 8898604
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||     
T  8898738 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaaa 8898639  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  8898638 ttggtcaaaggacgaaattttaaatgattaaacaa 8898604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 28325025 - 28324894
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||    
T  28325025 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccatttccatgccattttgctaatttgatgacgtggcagtgattaag 28324926  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||| ||||||||||||||||||||||    
T  28324925 ttggtcaaaagacgaaattttaaatgattaaa 28324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31058262 - 31058396
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  31058262 gaagacaggggtaaaaatgtcatttcgcgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 31058361  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||  ||||||||||||||||||||||||    
T  31058362 ttggtcaaaatacgaaattttaaatgattaaacaa 31058396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35038676 - 35038542
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||    
T  35038676 gaagacaggggtaaaaatgtcatttcacgaatggatgatgaggatatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattgag 35038577  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  35038576 ttggtcaaaggacgaaattttaaatgattaaacaa 35038542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 45750047 - 45750181
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||| || |||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  45750047 gaagacatggataaaaatgtcatttcacgaatggatgacgatgatatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 45750146  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| || ||||||||||||||||||||||    
T  45750147 ttggtcaaatgatgaaattttaaatgattaaacaa 45750181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 7371473 - 7371377
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  7371473 cgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaagttggtcaaaggacgaaattttaaataattaaacaa 7371377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 49955590 - 49955707
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||     |    
T  49955590 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggcggtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgc 49955689  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  49955690 aagggtaaattgccagga 49955707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 35040857 - 35040953
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  35040857 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 35040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 45750025 - 45749929
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||| ||||||||||||||||||||||||||||||||    
T  45750025 cgagggtatttttgtccattctcatgccattttgctaatttgatgacttggtagtgattaagtttgtcaaaggacgaaattttaaatgattaaacaa 45749929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 37929595 - 37929508
Alignment:
Q  45 tatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  37929595 tatttttgtccattctcatgccattttgctaatttgatgacgttacagtgattaagttggtcaaaggacgaaattttaaatgattaaa 37929508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 12905902 - 12906019
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||     |    
T  12905902 cgagggtatttttgtccattctcatgccattttgttaatttgatgacttgacagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgc 12906001  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  12906002 aagggtaaattgccagga 12906019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 40714687 - 40714782
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  40714687 cgagggtatttttgtccattc-catgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 40714782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 17189137 - 17189020
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | |||||||||| |||||||| ||||||||||||||||||||||     |    
T  17189137 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagctggtcaaatgacgaaattttaaatgattaaataatgc 17189038  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  17189037 aagggtaaattgccagga 17189020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 20760752 - 20760865
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagg 137  Q
    ||||||||||||||||| |||| |||||||||||||||||||    | ||||||||||||||||||||||||||||||||||||||||||     |||||    
T  20760752 ggtatttttgtccattcccatgtcattttgctaatttgatgatttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagg 20760851  T
Q  138 gtaaattgccagga 151  Q
    ||||||||||||||    
T  20760852 gtaaattgccagga 20760865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 8898760 - 8898856
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||   | ||||||||||||||||||| |||||||||||||||||||||||||    
T  8898760 cgagggtatttttgtccattcccgtgtcattttgctaatttgatgacttggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 8898856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 31051118 - 31051037
Alignment:
Q  54 ccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||| ||||||||||| |||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  31051118 ccattcccatgccattttactaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 31051037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 28325047 - 28325143
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||     ||||||||||||||||||| |||||||||||||||||||||||||    
T  28325047 cgaggatatttttgtccattcctatgtcattttgctaatttgatgacttgatagtgattaagttggtcaaaagacgaaattttaaatgattaaacaa 28325143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 30326673 - 30326583
Alignment:
Q  45 tatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||| |||| ||||||||||||||||||||   | |||||||||||| || ||| | |||||||||||||||||||||||    
T  30326673 tatttttgtccattcccatgtcattttgctaatttgatgacttggtagtgattaagttagttaaatgtcgaaattttaaatgattaaacaa 30326583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 32132486 - 32132393
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||  ||||| ||||||| |||  | |||||||||||||| |||||||||    
T  32132486 gaggttatttttgtccattcccatgacattttgctaatttgatgacgtggcagtaattaagtgggtgtagggacgaaattttaattgattaaac 32132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 5734191 - 5734096
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||   |||| |||||   |||  | |||| |||||||||||||||||||||    
T  5734191 gagggtatttttgtccattcccatgccattttgttaatttgatgacgtgacagtaattaaacgggtgcagggacaaaattttaaatgattaaacaa 5734096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 1841754 - 1841796
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1841754 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 1841796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 6367857 - 6367899
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6367857 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 6367899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 7821087 - 7821041
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  7821087 gcagtgattacgttggtcaaaggacgaaattttaaatgattaaacaa 7821041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 14879266 - 14879308
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14879266 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 14879308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 40210503 - 40210461
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40210503 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 40210461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 48779414 - 48779456
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48779414 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 48779456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 34464582 - 34464537
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 134  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34464582 gcagtgattaagttggtcaaatgacgaaattttaaatgattaaaca 34464537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 35152639 - 35152680
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  35152639 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 35152680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 13914199 - 13914159
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13914199 agtgattaagttggtcaaaggacgaaattttaaatgattaa 13914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 46282251 - 46282195
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  46282251 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 46282195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 49093221 - 49093165
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  49093221 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 49093165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 49093733 - 49093789
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  49093733 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 49093789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 50062868 - 50062912
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacg 86  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  50062868 gggtatttttgtcaattctcatgccattttgctaatttgatgacg 50062912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 5734957 - 5735048
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||   |||| ||||| | ||   | ||||||||||||||||||||||    
T  5734957 gagggcatttttgtctattctcatgccattttgttaatttgatgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaa 5735048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 37578326 - 37578283
Alignment:
Q  88 agcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  37578326 agcagtgattaagttggtcaaagaacgaaattttaaatgattaa 37578283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 183354 - 183312
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  183354 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 183312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 1103756 - 1103798
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  1103756 gcagtgaataagttggtcaaaggacgaaattttaaatgattaa 1103798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 4960804 - 4960846
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  4960804 gcagtgattaagttgatcaaaggacgaaattttaaatgattaa 4960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 17661980 - 17661942
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17661980 tgattaagttggtcaaaggacgaaattttaaatgattaa 17661942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 26024687 - 26024729
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  26024687 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 26024729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 30711622 - 30711664
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  30711622 gcagtgattaagttggtcaaatgacgaaattttaaatgattaa 30711664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 49723021 - 49723063
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  49723021 gcagtgattaagttggtcaaaggatgaaattttaaatgattaa 49723063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 7821250 - 7821291
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  7821250 cagtgattaagttggtcaaaggacgaaattataaatgattaa 7821291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 24009707 - 24009666
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  24009707 cagtgattaagttggtcaaaggatgaaattttaaatgattaa 24009666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 36694414 - 36694373
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  36694414 cagtgattaagttggtcaaagggcgaaattttaaatgattaa 36694373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 36710515 - 36710474
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  36710515 cagtgattaagttggtcaaagggcgaaattttaaatgattaa 36710474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 41099029 - 41099070
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  41099029 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 41099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 46282713 - 46282769
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |  ||||||||||    
T  46282713 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgatta 46282769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 50062383 - 50062327
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||  ||||||||||    
T  50062383 gggtatttttgtcaattcccatgtcattttgctaatttgatgacgtggcagtgatta 50062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 13295317 - 13295258
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||||  |||||||||||    
T  13295317 gagggtatttttgtctatttccatgtcattttgctaatttgatgacgtggcagtgattaa 13295258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 43759118 - 43759157
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgatt 129  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  43759118 cagtggttaagttggtcaaaggacgaaattttaaatgatt 43759157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 19017762 - 19017720
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  19017762 gcagtgattaagttggtcaacgaacgaaattttaaatgattaa 19017720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 23209494 - 23209452
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  23209494 gcagtgattaagttggtcaaagaacaaaattttaaatgattaa 23209452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 24905300 - 24905258
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  24905300 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 24905258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 32917559 - 32917597
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32917559 tgattaagttggtcaaaggatgaaattttaaatgattaa 32917597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 40772767 - 40772809
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  40772767 gcagtgattaagttggtcaaaggacgaaatttgaaataattaa 40772809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 46899242 - 46899152
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||| |||||||||||||| |||||||||||| | ||||||||| |  ||||| ||||| | ||   | ||||||||||||||||||||||    
T  46899242 agggcatttttgtccattcccatgccattttgtttatttgatgatgtggcagtaattaactgggctcagggacgaaattttaaatgattaa 46899152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 46899847 - 46899937
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||| |||||||| ||||| ||||||||||| ||||||||||||||   |||| ||||| | ||   | ||||||||||||||||||||||    
T  46899847 agggcatttttgttcattcccatgccattttactaatttgatgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaa 46899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 28011633 - 28011674
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  28011633 cagtgattaagttggtccaaggaccaaattttaaatgattaa 28011674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30326701 - 30326746
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggta 46  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  30326701 gaagacatgggtaaaaatgtcatttcatgaatggatgacgagggta 30326746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 35473763 - 35473722
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  35473763 cagtgattaagttggtcaaaggacaaaattttaaatgtttaa 35473722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 19323023 - 19322983
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  19323023 agtgattaagttggtcaaagaacgaacttttaaatgattaa 19322983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 19323189 - 19323229
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  19323189 agtgattaagttggtcaaagaacgaacttttaaatgattaa 19323229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 47999250 - 47999214
Alignment:
Q  95 attaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47999250 attaagttggtcaaaggactaaattttaaatgattaa 47999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 7231544 - 7231586
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||    
T  7231544 gcagtgattaagttggtcaaatgacaaaattttaaataattaa 7231586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 30711460 - 30711414
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||| || | | ||||||||||||||||||||||||||    
T  30711460 gcagtgattaagtggggcgagggacgaaattttaaatgattaaacaa 30711414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 134
Target Start/End: Original strand, 32558416 - 32558445
Alignment:
Q  105 tcaaaggacgaaattttaaatgattaaaca 134  Q
    ||||||||||||||||||||||||||||||    
T  32558416 tcaaaggacgaaattttaaatgattaaaca 32558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 32133219 - 32133262
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaaac 133  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||    
T  32133219 gcagtaattaagtgggtcaa-ggacgaaattttaaatgattaaac 32133262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7161025 - 7160891
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||  | ||||||||||    
T  7161025 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgctattttgctaatttgatgacgtggtagtgattaag 7160926  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  7160925 ttggtcaaaggacgaaattttaaatgattaaacaa 7160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15913753 - 15913887
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  15913753 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtgattaag 15913852  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||||||| |||||||||    
T  15913853 ttggtcaaaggacgaaattttaaattattaaacaa 15913887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 21836251 - 21836097
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  21836251 gaagacaggggtaaaaatgtcatttcaagaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 21836152  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    || |||||||||||||||||||||||||||||     |||||||||||||||||||    
T  21836151 tt-gtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 21836097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22502979 - 22503113
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||    
T  22502979 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaag 22503078  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| ||||||| |||||||||||||||||    
T  22503079 ttggtcaaatgacgaaaatttaaatgattaaacaa 22503113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31407083 - 31407217
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||   |||||||||||    
T  31407083 gaagacagggataaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtgacagtgattaag 31407182  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  31407183 ttggtcaaaggacgaaattttaaatgattaaacaa 31407217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7905448 - 7905582
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  7905448 gaagacaggggtaagaatgtcatttcacaaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacgtggcagtgattaag 7905547  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||| |||||||||| ||||||||||||||    
T  7905548 ttggtcaaatgacgaaatttgaaatgattaaacaa 7905582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 12065441 - 12065310
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||    
T  12065441 gaagacaagggtaaaaatgtcatttcacaaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacctgacagtgattaag 12065342  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||| ||||||||||||||||||||    
T  12065341 ttggtcaaaggtcgaaattttaaatgattaaa 12065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 22502956 - 22502861
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  22502956 gagggtatttttgtccattctcataccattttgctaatttgatgacttggcagttattaagttggtcaaaggacgaaattttaaatgattaaacaa 22502861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 21836273 - 21836369
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  21836273 cgaggatatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 21836369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 6517685 - 6517589
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  6517685 cgaggctatttttgttcattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 6517589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 10781379 - 10781248
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgat-----gacgcagcagtga 95  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||| |||||||||||||| ||     ||||  | |||||    
T  10781379 gaagacaggggtaaaaatgtcatttcacgaatggatgacgaggatatttttgtccattaccatggcattttgctaatttaatttaatgacgtggtagtga 10781280  T
Q  96 ttaagttggtcaaaggacgaaattttaaatgat 128  Q
    |||||||||||||| ||||||||||||||||||    
T  10781279 ttaagttggtcaaa-gacgaaattttaaatgat 10781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 7905426 - 7905309
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    | |||||||||||||||||| ||||||||||||||||||||||     |    
T  7905426 cgagggtatttttgtccattcccgtgccattttgctaatttgatgacttgacggtgattaagttggtcaaatgacgaaattttaaatgattaaataatgc 7905327  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  7905326 aagggtaaattgccagga 7905309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 31407061 - 31406968
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||   | |||||||||||| |||||||||||||||||||||||||||||    
T  31407061 cgagggtatttttgtccatttccatgccattttgctaatttgatgacttgggagtgattaagtttgtcaaaggacgaaattttaaatgattaaa 31406968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 15913731 - 15913635
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||   | ||||||||||||| ||||| |||||||||||||||||||||||||    
T  15913731 cgagggtatttttgtcaatttccatgccattttgctaatttgatgacttggtagtgattaagttgttcaaatgacgaaattttaaatgattaaacaa 15913635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 7161051 - 7161143
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||| ||||| |||||||||||||||||||      |||||||||||||||||| |||||||||||||||||||||||||    
T  7161051 ggtatttttgtccattcccatgcaattttgctaatttgatgacttgatggtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 7161143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 10781401 - 10781497
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||   | |||||||||||||||||||| || ||||||||||| |||||||||    
T  10781401 cgaggatatttttgtccattcccatgccattttgcgaatttgatgacttggtagtgattaagttggtcaaagaacaaaattttaaataattaaacaa 10781497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 8089625 - 8089530
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||   | || ||||||| ||| || ||||||||||||||||||||||||||    
T  8089625 gagggtatttttgtccattcccatgccattttgttaatttgatgacgtgtcggtcattaagtgggttaagggacgaaattttaaatgattaaacaa 8089530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 20651191 - 20651101
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||  ||||| ||||| | |    | ||||||||||||||||||||||    
T  20651191 agggcatttttgtccattcccatgccattttgctaatttgatgacgtggcagttattaactggactcatggacgaaattttaaatgattaa 20651101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 21627846 - 21627804
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21627846 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 21627804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 30726054 - 30726096
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30726054 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 30726096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 30804156 - 30804198
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30804156 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 30804198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 33517829 - 33517871
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33517829 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 33517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 14657129 - 14657185
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  14657129 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 14657185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 33400146 - 33400090
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  33400146 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 33400090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 17734329 - 17734287
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  17734329 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 17734287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 30337713 - 30337755
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  30337713 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 30337755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 4117467 - 4117524
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |  |||||||||||    
T  4117467 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgattaa 4117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 12080932 - 12080973
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  12080932 cagtaattaagttggtcaaaggacgaaattttaaatgattaa 12080973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 20651899 - 20651984
Alignment:
Q  46 atttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||| ||||||| |||| |||||||||||||| ||||||  ||||| ||||| | |||  | ||||||||||||||||||||||    
T  20651899 atttttatccattcccatgtcattttgctaatttaatgacgtggcagtaattaactgggttcagggacgaaattttaaatgattaa 20651984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 3059551 - 3059593
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  3059551 gcagtgattaagttggtcaaaagatgaaattttaaatgattaa 3059593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 11393099 - 11393141
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  11393099 gcagtgattaagttggtcaaatgacgaaatttgaaatgattaa 11393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 11434935 - 11434893
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  11434935 gcagtgattaactgggtcaaaggacgaaattttaaatgattaa 11434893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 32593623 - 32593581
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  32593623 gcagtgattaagttggtccaaagacgaaattttaaatgattaa 32593581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 33647246 - 33647288
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  33647246 gcagtgattaagtttgtcaaaggactaaattttaaatgattaa 33647288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 14196747 - 14196706
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  14196747 cagtgattaagttggtccaaggaccaaattttaaatgattaa 14196706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 14656660 - 14656603
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||   |||||||||||    
T  14656660 gggtatttttgtcaattcccatgccattttactaatttgatgacatggcagtgattaa 14656603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 3176304 - 3176347
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacg 86  Q
    ||||||||||||||||||||| | |||||| |||||||||||||    
T  3176304 ggtatttttgtccattctcatactattttggtaatttgatgacg 3176347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 11435955 - 11436006
Alignment:
Q  80 gatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||  ||| ||||||||| |||||| ||||||||||||||||||||||    
T  11435955 gatgacgtggcaatgattaagtgggtcaagggacgaaattttaaatgattaa 11436006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 139949 - 139883
Alignment:
Q  66 cattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||||||  ||||| ||||||| | | ||  || |||||||||||||||||||    
T  139949 cattttgctaatttgatgacgtggcagtcattaagtggattaagtgatgaaattttaaatgattaaa 139883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 147970 - 147904
Alignment:
Q  66 cattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||||||  ||||| ||||||| | | ||  || |||||||||||||||||||    
T  147970 cattttgctaatttgatgacgtggcagtcattaagtggattaagtgatgaaattttaaatgattaaa 147904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 1661350 - 1661392
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatga 84  Q
    ||||||||||||| |||| |||||||||||| |||||||||||    
T  1661350 gggtatttttgtcaattcccatgccattttgataatttgatga 1661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 13379729 - 13379819
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||| |||||||||||||| ||  |||||||||||||||||||||    |||| ||||| | ||   | ||||||||||||||||||||||    
T  13379729 agggcatttttgtccattcccaaaccattttgctaatttgatgacatgacagtaattaactgggctcagggacgaaattttaaatgattaa 13379819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 33401045 - 33401103
Alignment:
Q  42 gggtatttttgtccattctcatgcca-ttttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||  |||||| ||||    
T  33401045 gggtatttttgtcaattcccatgccatttttgctaatttgatgacgtggcagtggttaa 33401103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 33517674 - 33517600
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||| |||||||||||||| ||   | |||||||||||||||||||||||     |||||||||||||||||||    
T  33517674 tgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 33517600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 4116979 - 4116922
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| || ||||||||||||||||||| | |  |||||||||||    
T  4116979 gggtatttttgtcaattcccacgccattttgctaatttgataatgtggcagtgattaa 4116922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 25486085 - 25486044
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  25486085 cagtgattaaattggtccaaggaccaaattttaaatgattaa 25486044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 22367552 - 22367516
Alignment:
Q  95 attaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  22367552 attaatttggtcaaaggaccaaattttaaatgattaa 22367516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17544253 - 17544408
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||    
T  17544253 gaagacaggggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaag 17544352  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||||||| ||||||||||||||||||     |||||||||||||||||||    
T  17544353 ttggtcaaaggacaaaattttaaatgattaaacaatgcaagggtaaattgccagga 17544408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20153123 - 20153257
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  20153123 gaagataggggtaaaaatgtcatttcgcgaatggatgacgagggtatttttgtccattcccatgtcattttgctaatttgatgacgtagcagtgattaag 20153222  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||| ||||||||||||||||||||||    
T  20153223 ttggtcaaaggatgaaattttaaatgattaaacaa 20153257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 33871544 - 33871698
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||| |||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  33871544 gaagacaggggtaaaaatatcatttcacgaatggatgacgatggtatttt-gtccattcccatgtcattttgctaatttgatgacgtagcagtgattaag 33871642  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    ||||||||| ||||||||||||||||||||||     |||||||||||||||||||    
T  33871643 ttggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 33871698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 17544231 - 17544135
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  17544231 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaatgacaaaattttaaatgattaaacaa 17544135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 33871522 - 33871426
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||   || ||||||||||||||||||||||||||||||||||||||||||||    
T  33871522 cgagggtatttttgtccatttccatgccattttgctagtttgatgacttggcggtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 33871426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 135
Target Start/End: Original strand, 21287904 - 21287996
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||| |||||||||||||||||||||||||   |  ||||||||||||||||||||| ||||||||||||||||||||||    
T  21287904 ggtatttttgtccattcccatgccattttgctaatttgatgacttggtggtgattaagttggtcaaaggaagaaattttaaatgattaaacaa 21287996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 22298725 - 22298629
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||   | |||||||||||||||||||||| ||||||||||||||||||||||    
T  22298725 cgagggtatttttgtcaattcccatgtcattttgctaatttgatgacttggtagtgattaagttggtcaaaggatgaaattttaaatgattaaacaa 22298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 11741763 - 11741855
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    |||||||||| | ||||||||||||||||||||||||||||||    
T  11741763 gagggtatttttgtccattccaatgccattttgctaatttgatgacctgacagtgattaactgggtcaaaggacgaaattttaaatgattaaa 11741855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 20152963 - 20152868
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||| ||||| ||| |||||| ||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  20152963 cgagggtatttttgttcattcccataccattt-gctaatttgatgacttggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 20152868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 8875618 - 8875536
Alignment:
Q  53 tccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||  |||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8875618 tccattcctatgccattttactaatttgatgacgtggcagtgattaagttggtcaaagaacgaaattttaaatgattaaacaa 8875536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 21287904 - 21287830
Alignment:
Q  61 catgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||| ||||||  | ||||||||||||||||||| |||||||||||||||||||||||||    
T  21287904 catgccattttgctaatttaatgacgtggtagtgattaagttggtcaaatgacgaaattttaaatgattaaacaa 21287830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 22869787 - 22869728
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22869787 gagggtatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaa 22869728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 20153101 - 20153031
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaa 109  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   | |||||||||||||||||||    
T  20153101 cgagggtatttttgtccattcccatgccattttgctaatttgatgacttggtagtgattaagttggtcaaa 20153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 8322692 - 8322741
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8322692 tgacgcggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 8322741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 22870380 - 22870471
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaag-gacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||  ||||||||||| | ||  | || |||||||||||||||||||||    
T  22870380 gagggtatttttgtccattcccatgtcattttgctaatttgatgacgtggcagtgattaa-tcgggaagagagacgaaattttaaatgattaa 22870471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 5994184 - 5994226
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5994184 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 5994226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 6150715 - 6150757
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6150715 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 6150757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 11047732 - 11047774
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11047732 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 11047774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 14194556 - 14194514
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14194556 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 14194514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 16156988 - 16156946
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16156988 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 16156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22298747 - 22298797
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtattttt 51  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  22298747 gaagacacgggtaaaaatgtcatttcacgaatggatgacgagggtattttt 22298797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 28269555 - 28269513
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28269555 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 28269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 39453594 - 39453636
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39453594 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 39453636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 43159109 - 43159151
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43159109 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 43159151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 27587403 - 27587452
Alignment:
Q  82 tgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  27587403 tgacgtagcagtgattaagttggtcaaaggactaaattttaaatgattaa 27587452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 20072301 - 20072245
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  20072301 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 20072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 20072789 - 20072845
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  20072789 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 20072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 36477296 - 36477352
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  36477296 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 36477352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 39181716 - 39181772
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  39181716 gggtatttttgtcaattcccatgccattttgctaatttgatgacgtggcagtgatta 39181772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 21257408 - 21257451
Alignment:
Q  41 agggtatttttgtccattctcatgccattttgctaatttgatga 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  21257408 agggcatttttgtccattctcatgccattttgctaatttgatga 21257451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 186718 - 186756
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||    
T  186718 tgattaagttggtcaaaggacgaaattttaaatgattaa 186756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 3529006 - 3528964
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  3529006 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 3528964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 6301838 - 6301880
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6301838 gcagtgattaaattggtcaaaggacgaaattttaaatgattaa 6301880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 11762012 - 11762054
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  11762012 gcagtgattaagttggtcaaaggactaaattttaaatgattaa 11762054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 13362360 - 13362318
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  13362360 gcagtgattaagttggtcagaggacgaaattttaaatgattaa 13362318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 13963124 - 13963166
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  13963124 gcagtgattaagttggtcaaagaacgaaattttaaatgattaa 13963166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 17202694 - 17202736
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  17202694 gcagtgattaagttggtcaaatgacgaaattttaaatgattaa 17202736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 19892441 - 19892399
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  19892441 gcagtgattaagttgatcaaaggacgaaattttaaatgattaa 19892399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 20814268 - 20814226
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  20814268 gcagtgattaagttggttaaaggacgaaattttaaatgattaa 20814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 21265276 - 21265234
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  21265276 gcagtgattaagttggtcaaaggacgaaattttaaataattaa 21265234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 27937186 - 27937144
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  27937186 gcagtgattaagttggtcaaatgacgaaattttaaatgattaa 27937144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 32242537 - 32242579
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  32242537 gcagtgattaagttggtcaaaggacaaaattttaaatgattaa 32242579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 35920357 - 35920319
Alignment:
Q  93 tgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35920357 tgattaagttggtcaaaggacgaaattttaaatgattaa 35920319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 38475166 - 38475124
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  38475166 gcagtgattaagttggtcaaatgacgaaattttaaatgattaa 38475124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 5024152 - 5024111
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgatta 130  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  5024152 gcagtgattaagttggtcaaaggacaaaattttaaatgatta 5024111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 5255149 - 5255108
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  5255149 cagtgattaagttggtcaaatgacgaaattttaaatgattaa 5255108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 38442363 - 38442404
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  38442363 cagtgattaagttggtcaaaggacgaaattttaaatggttaa 38442404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 16533545 - 16533601
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||  ||||||||||    
T  16533545 gggtatttttgtcaattcccatgccattttgctaatttaatgacgtggcagtgatta 16533601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 36476945 - 36476889
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |  ||||||||||    
T  36476945 gggtatttttgtcaattcccatgccattttgctaatttgatgatgtggcagtgatta 36476889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 39181237 - 39181193
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacg 86  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  39181237 gggtatttttgtcaattcccatgccattttgctaatttgatgacg 39181193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 6301676 - 6301634
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||||||||||||||||||| |||||    
T  6301676 gcagtgattaaattggtcaaaggacgaaattttaaataattaa 6301634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 6757998 - 6757956
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  6757998 gcagtgattaagttggtccaaggaccaaattttaaatgattaa 6757956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 16083238 - 16083280
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  16083238 gcagtgattaagttggtcaaataacgaaattttaaatgattaa 16083280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 18670460 - 18670502
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  18670460 gcagtgattaagttggttaaatgacgaaattttaaatgattaa 18670502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 19517902 - 19517944
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  19517902 gcagtgattaagttggtcaaaagacaaaattttaaatgattaa 19517944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 20857113 - 20857055
Alignment:
Q  42 gggtatttttgtccattctcatgccatttt-gctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||  |||||||||||    
T  20857113 gggtatttttgtcaattcccatgccatttttgctaatttgatgacgtggcagtgattaa 20857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 24547323 - 24547281
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  24547323 gcagtgattaaattggtcaaatgacgaaattttaaatgattaa 24547281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 29646495 - 29646453
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  29646495 gcagtgattaagttggtcaaaggataaaattttaaatgattaa 29646453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 35512409 - 35512451
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  35512409 gcagtgattaagttagtcaaatgacgaaattttaaatgattaa 35512451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 10684234 - 10684275
Alignment:
Q  90 cagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  10684234 cagtgattaagttggtcaaatgacgaaactttaaatgattaa 10684275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 16533073 - 16533017
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgatta 98  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||  ||||||||||    
T  16533073 gggtatttttgtgaattcccatgccattttgctaatttaatgacgtggcagtgatta 16533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 41930782 - 41930822
Alignment:
Q  91 agtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  41930782 agtgattaagttggtccaaggaccaaattttaaatgattaa 41930822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 20152991 - 20153034
Alignment:
Q  9 gggtaaaaatgtcatttcacgaatggatggcgagggtatttttg 52  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||    
T  20152991 gggtaaaaatgtcatttcgtgaatggatgacgagggtatttttg 20153034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 28771002 - 28770963
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgat 128  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  28771002 gcagtgattaagttggtcaaatgactaaattttaaatgat 28770963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 20857466 - 20857524
Alignment:
Q  42 gggtatttttgtccattctcatgcca-ttttgctaatttgatgacgcagcagtgattaa 99  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||| |  |||||||||||    
T  20857466 gggtatttttgtcaattcccatgccatttttgctaatttgatgaggtggcagtgattaa 20857524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 14194717 - 14194785
Alignment:
Q  88 agcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    |||||||||||||| ||   | |||||||||||||||||||||||     |||||||||||||||||||    
T  14194717 agcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 14194785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 30005283 - 30005243
Alignment:
Q  92 gtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  30005283 gtgattaagttggtcaaaagataaaattttaaatgattaaa 30005243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 2614 - 2480
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||||||||||||||||||| |||  | ||||||||||    
T  2614 gaagacaggggtaaaaatgtcatttcacgaatggatgacgatgttatttttgtccattcccatgccattttgctaatttgataacgtggtagtgattaag 2515  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  2514 ttggtcaaaggacgaaattttaaatgattaaacaa 2480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11985 - 12119
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||||||||||||||  |||||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  11985 gaagacaggggtaaaaattgcatttcccgaatggatgacgatgatatttttgtccattctcatgccattttgctaatttgatgacgtggcagtgattaag 12084  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||||||||||||||||||    
T  12085 ttggtcaaaggacgaaattttaaatgattaaacaa 12119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 222010 - 221856
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    |||||||||| |||||||||||||||| |||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  222010 gaagacagggataaaaatgtcatttcaagaatggatgatgagggtatttttgttcattcccatgccattttgctaatttgatgacgtggcagtgattaag 221911  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    || |||||||||||||||||||||||||||||     |||||||||||||||||||    
T  221910 tt-gtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 221856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 222032 - 222128
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  222032 cgagggtatttttgtccattcccatgccattttgttaatttgatgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12444 - 12599
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaag 100  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||| |||| |||| |||||||||||||||||||||  ||||||||||||    
T  12444 gaagacatgggtaaaaatgtcatttcaagaatggatgacgatggtatttttgtctattcccatgtcattttgctaatttgatgacgtggcagtgattaag 12543  T
Q  101 ttggtcaaaggacgaaattttaaatgattaaa-----caagggtaaattgccagga 151  Q
    | |||||||| |||||||||||||||||||||     |||||||||||||||||||    
T  12544 taggtcaaagaacgaaattttaaatgattaaacaatgcaagggtaaattgccagga 12599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 12422 - 12306
Alignment:
Q  39 cgagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa-----c 133  Q
    ||||| ||||||||||||||  |||| ||||||||||||||||||||   | ||||||| |||| |||||| ||||||||||||||||||||||     |    
T  12422 cgaggatatttttgtccatttccatgtcattttgctaatttgatgacttgggagtgatttagtttgtcaaa-gacgaaattttaaatgattaaacaatgc 12324  T
Q  134 aagggtaaattgccagga 151  Q
    ||||||||||||||||||    
T  12323 aagggtaaattgccagga 12306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 1102 - 1007
Alignment:
Q  40 gagggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1102 gagggtatttttgtccattcccatgccattttgctaatttgatgacttgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaa 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1125 - 1183
Alignment:
Q  1 gaagacaggggtaaaaatgtcatttcacgaatggatggcgagggtatttttgtccattc 59  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1125 gaagacaagggtaaaaatgtcatttcacgaatggatgacgagggtatttttgtccattc 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 5142 - 5053
Alignment:
Q  42 gggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||| ||  |||| |||||||||||||||||||||  |||| |||||| | |||||||||||||||||||||||||||||    
T  5142 gggtatttttgtccttttccatgtcattttgctaatttgatgacgtggcagcgattaattaggtcaaaggacgaaattttaaatgattaa 5053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 6227 - 6318
Alignment:
Q  43 ggtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaaca 134  Q
    ||||||||||||| |||  |||||| ||||||||||||||||||  ||||| ||||||| ||| || | |||||||||||||||||||||||    
T  6227 ggtatttttgtcctttcctatgccactttgctaatttgatgacgtggcagtcattaagtgggttaaggaacgaaattttaaatgattaaaca 6318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 20035 - 19947
Alignment:
Q  44 gtatttttgtccattctcatgccattttgctaatttgatgacgcagcagtgattaagttggtcaaaggacgaaattttaaatgattaaa 132  Q
    |||||||||||||||| ||||||||||||||||||||||||||   |||| ||||| | ||| || | |||||||||||||||||||||    
T  20035 gtatttttgtccattcccatgccattttgctaatttgatgacgtgacagtcattaattaggttaatgaacgaaattttaaatgattaaa 19947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 37697 - 37655
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37697 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 37655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 2438 - 2480
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2438 gcagtgattaagttggtcaaagggcgaaattttaaatgattaa 2480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 69260 - 69302
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  69260 gcagtgattaagttggttaaaggacgaaattttaaatgattaa 69302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 14562 - 14520
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  14562 gcagtgattaagttggtcaaaagacaaaattttaaatgattaa 14520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 2036 - 2078
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  2036 gcagtgattaaattggtcaaagaacgaaattttaaatgattaa 2078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 139936 - 139978
Alignment:
Q  89 gcagtgattaagttggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||    
T  139936 gcagttattaagttggtcaaaggactaaattttaaataattaa 139978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 6387 - 6416
Alignment:
Q  102 tggtcaaaggacgaaattttaaatgattaa 131  Q
    ||||||||||||||||||||||||||||||    
T  6387 tggtcaaaggacgaaattttaaatgattaa 6416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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