View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16580_high_5 (Length: 260)
Name: NF16580_high_5
Description: NF16580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16580_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 32266195 - 32265968
Alignment:
| Q |
17 |
aagaaatctatgagaatggtagcaaatgtttgaaatatgagttttttgattatgaaaaggacaatgatatttcttatgattcaacaacagatgttgagag |
116 |
Q |
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| T |
32266195 |
aagaaatctatgagaatggtagcaaaagtttgaaatatgagttttttgattatgaaaaggacaatgatatttcttatgattcaacaacagatgttgagag |
32266096 |
T |
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| Q |
117 |
tgatgaagaaaacagttcagaaagtgattcttttcctgctgcaaaatctcataacagtaaagctgtgaatagaaagaaattatcatcaagcaacaagggt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266095 |
tgatgaagaaaacagttcagaaagtgattcttttcctgctgcaaaatctcataacagtaaagctgtgaatagaaagaaattatcatcaagcaacaagggt |
32265996 |
T |
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| Q |
217 |
aagaagaagaagaagttgaagtcaaaga |
244 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
32265995 |
aagaagaagaagaagttgaagtcaaaga |
32265968 |
T |
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