View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16580_low_6 (Length: 316)
Name: NF16580_low_6
Description: NF16580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16580_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 20 - 306
Target Start/End: Original strand, 10434701 - 10434987
Alignment:
| Q |
20 |
gatggaaggggaataggccaacagggtaccttgttatatagcgtagatcgcaatcattacaaagagagtaatttgaacagacatagaaagcatagctaca |
119 |
Q |
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| T |
10434701 |
gatggaaggggaataggccaacaaggtaccttgttatatagcgtagatcgcaatcattacaaagagagtaatttgaacagacatagaaagcatagctaca |
10434800 |
T |
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| Q |
120 |
ttactaaccttattgtcctgaaaaaccagctcaatatcagagagatcttgttgggcttctaatattgctttcaatgaaggaatcacatcctcctccatca |
219 |
Q |
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| T |
10434801 |
ttactaaccttattgtcctgaaaaaccagctcaatatcagagagatcttgttgggcttctaatattgctttcaatgaaggaatcacatcctcctccatca |
10434900 |
T |
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| Q |
220 |
tctgaggtaaaggcttaactggagctttagcaggagtcttctttactgcttctgcttttggagcttcttcttttacctcctcctttg |
306 |
Q |
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| T |
10434901 |
tctgaggtaaaggcttaactggagctttagcaggagtcttctttactgctgctgcttttggagcttcttcctttacctcctcctttg |
10434987 |
T |
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