View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16582_low_1 (Length: 963)

Name: NF16582_low_1
Description: NF16582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16582_low_1
NF16582_low_1
[»] chr4 (59 HSPs)
chr4 (10-946)||(27571081-27572014)
chr4 (188-819)||(27418996-27419621)
chr4 (186-498)||(27411379-27411690)
chr4 (174-793)||(27566870-27567485)
chr4 (174-510)||(27414212-27414550)
chr4 (173-505)||(27421841-27422176)
chr4 (184-505)||(27424432-27424755)
chr4 (269-427)||(27556384-27556542)
chr4 (552-793)||(27422210-27422448)
chr4 (265-426)||(27478884-27479045)
chr4 (265-426)||(27485944-27486105)
chr4 (265-378)||(27506724-27506837)
chr4 (265-379)||(27412689-27412803)
chr4 (223-420)||(27513735-27513932)
chr4 (552-798)||(27414562-27414809)
chr4 (265-377)||(27444795-27444907)
chr4 (226-377)||(27431110-27431261)
chr4 (265-362)||(27563347-27563444)
chr4 (265-420)||(27486967-27487122)
chr4 (265-375)||(27585717-27585827)
chr4 (265-355)||(27595434-27595524)
chr4 (265-422)||(27559241-27559398)
chr4 (226-378)||(27425838-27425990)
chr4 (269-377)||(27557516-27557624)
chr4 (265-420)||(27526113-27526268)
chr4 (265-420)||(27479885-27480040)
chr4 (266-385)||(27501336-27501455)
chr4 (265-420)||(27505703-27505858)
chr4 (284-426)||(27527139-27527281)
chr4 (263-420)||(27498399-27498556)
chr4 (265-362)||(27503964-27504061)
chr4 (265-420)||(27476671-27476826)
chr4 (266-349)||(27554364-27554447)
chr4 (265-375)||(27415650-27415760)
chr4 (265-362)||(27468328-27468425)
chr4 (265-362)||(27475580-27475677)
chr4 (269-362)||(27524566-27524659)
chr4 (268-360)||(27490004-27490096)
chr4 (266-362)||(27514933-27515029)
chr4 (265-427)||(27446124-27446286)
chr4 (265-362)||(27420450-27420547)
chr4 (265-426)||(27497323-27497484)
chr4 (226-375)||(27565913-27566062)
chr4 (265-362)||(27570050-27570147)
chr4 (266-378)||(27502809-27502921)
chr4 (265-360)||(17970343-17970438)
chr4 (612-793)||(27424835-27425026)
chr4 (266-312)||(27507815-27507861)
chr4 (265-315)||(27600642-27600692)
chr4 (831-940)||(27419645-27419754)
chr4 (265-362)||(27423264-27423361)
chr4 (263-308)||(27473988-27474033)
chr4 (265-308)||(27460574-27460617)
chr4 (265-308)||(27466917-27466960)
chr4 (265-420)||(27469444-27469599)
chr4 (265-320)||(27495620-27495675)
chr4 (269-360)||(27508896-27508987)
chr4 (838-900)||(27425068-27425130)
chr4 (269-315)||(27577407-27577453)
[»] chr5 (3 HSPs)
chr5 (265-420)||(1756758-1756913)
chr5 (236-435)||(1755967-1756166)
chr5 (266-420)||(1754243-1754397)
[»] chr3 (16 HSPs)
chr3 (265-420)||(55084770-55084925)
chr3 (269-426)||(38032260-38032417)
chr3 (269-426)||(38035033-38035190)
chr3 (269-426)||(38038525-38038682)
chr3 (269-426)||(50913474-50913631)
chr3 (269-426)||(38027433-38027590)
chr3 (265-378)||(38043929-38044042)
chr3 (265-420)||(38024876-38025031)
chr3 (265-420)||(38031328-38031483)
chr3 (265-360)||(50910004-50910099)
chr3 (265-420)||(50911870-50912025)
chr3 (265-311)||(48840713-48840759)
chr3 (265-322)||(38028767-38028824)
chr3 (265-357)||(50904793-50904885)
chr3 (265-420)||(38036794-38036949)
chr3 (265-322)||(38040082-38040139)
[»] chr8 (3 HSPs)
chr8 (269-426)||(21608235-21608392)
chr8 (265-339)||(21634608-21634682)
chr8 (265-322)||(21607297-21607354)
[»] chr2 (1 HSPs)
chr2 (265-360)||(3073613-3073708)


Alignment Details
Target: chr4 (Bit Score: 781; Significance: 0; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 781; E-Value: 0
Query Start/End: Original strand, 10 - 946
Target Start/End: Complemental strand, 27572014 - 27571081
Alignment:
Q  10 gagagatgaaaaaagctgcaactgtttcaacaatatttggtgtcattaataatttaacattctcattcaggaaacattttgatttccgtaggaatgattg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27572014 gagagatgaaaaaagctgcaactgtttcaacaatatttggtgtcattaataatttaacattctcattcaggaaacattttgatttccgtaggaatgattg 27571915  T
Q  110 attaatacatggacggaacaataaaaaaatcttcaacagnnnnnnnnnnnntggtttctatagtaattagcttcaactaatctatctaaatctccattag 209  Q
    |||||||||||||||||||||||||||| ||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27571914 attaatacatggacggaacaataaaaaa-tcttcaacagaaaaaaaaaa--tggtttctatagtaattagcttcaactaatctatctaaatctccattag 27571818  T
Q  210 catgatctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccataggatgatcatatccaaattc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27571817 catgatctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccattggatgatcatatccaaattc 27571718  T
Q  310 ttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccgtctcattctatcgccaacatacactgcgaga 409  Q
    |||||||| |||||||||||||||||||||  |||| ||| |||| ||||||| ||||||||| ||||| ||||||||||| |||||||| |||||||||    
T  27571717 ttcttctgattgatttagtaattcttgaaacgatggctggctcaaatatgatactggaatcacgaaccgcctcattctatctccaacatagactgcgaga 27571618  T
Q  410 tagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattctgataagctttgctatgcggaaacccattgtttttatta 509  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27571617 tagccttttgggacttcaagtcccttggcagtctcttgtgttttggaaaatgatggcattctgataagctttgctatgcggaaacccattgtttttagta 27571518  T
Q  510 tttatggttcctcacnnnnnnnn-tactgatgatggcagaggattggatgagaaagaaatatttgagtttttataactcagaatggaaaagatttgtgtt 608  Q
    |||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27571517 tttatggttcctcacaaaaaaaaatactgatgatggcagaggattggatgagaaagaaatatttgagtttttataactcagaatggaaaagatttgtgtt 27571418  T
Q  609 gctttgagaactcaaggaatagtgtatatatagttgctaagggtctgaaacaaaccaattaaccaatgaatgtattttgatggattgtaatagagtctag 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27571417 gctttgagaactcaaggaatagtgtatatatagttgctaagggtctcaaacaaaccaattaaccaatgaatgtattttgatggattgtaatagagtctag 27571318  T
Q  709 ttaggtacaagggttcacatggtattgtcttatagaggtcattttcaaggattagatgaagctaaatataagaacatgcaaatactctaccttctgagat 808  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27571317 ttaggtacaagggttcacatggtattgtcttatagaggtcattttcaaggattagatgaagctaaatataagaacatgcaaatactctaccttctgagat 27571218  T
Q  809 aatggccaacagacatggtaaaacaatgcattggtgaaaaagacctgatgtttgttaatgcattttggtatagttgatccactggtagacatactacaga 908  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27571217 aatggccaacagacatggtaaaacaatgcattggtgaaaaagacctgatgtttgttaatgcattttgg-atagttgatccactggtagacatactacaga 27571119  T
Q  909 catatctcatgtttcttcagattgacaatgcacaatat 946  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27571118 catatctcatgtttcttcagattgacaatgcacaatat 27571081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 188 - 819
Target Start/End: Original strand, 27418996 - 27419621
Alignment:
Q  188 aatctatctaaatctccattagcatgatctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccaccca 287  Q
    ||||||||| |||||||||||||||||| || |  ||| || ||||||||||| || | || |||  |||| || |||||||||||||| ||||||||||    
T  27418996 aatctatcttaatctccattagcatgatttacaaatcactt-aagcgagaagtgagttgtaagaaagcatcttcaccgcaaggaattgtaagaccaccca 27419094  T
Q  288 taggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccgtctcattct 387  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||  |||| ||| |||| ||||||| ||||||||| ||||| ||||||||    
T  27419095 ttggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaacgatggctggctcaaatatgatactggaatcacgaaccgcctcattct 27419194  T
Q  388 atcgccaacatacactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattctgataagctttgctatg 487  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||    
T  27419195 atctccaacatagactgcgagatagccttttgggacttcaagtcccttggcagtctcttgtgttttggaaaatgatggcattctgataagctttgctatg 27419294  T
Q  488 cggaaacccattgtttttattatttatggttcctcacnnnnnnnntactgatgatggcagaggattggatgagaaagaaatatttgagtttttataactc 587  Q
    ||||||||||||||||||||||| ||||| |||||||        |||||||||||||||||||||||||||||||||||||||||| || |||||| ||    
T  27419295 cggaaacccattgtttttattatgtatggctcctcac-aaaaagatactgatgatggcagaggattggatgagaaagaaatatttgaattcttataattc 27419393  T
Q  588 agaatggaaaagatttgtgttgctttgagaactcaaggaatagtgtatatatagttgctaagggtctgaaacaaaccaattaaccaatgaatgtattttg 687  Q
    |||||| ||||||||| ||||| ||||||||  ||||||||| ||||||||||||| ||||||| ||   ||||||||||||| || |||||||| ||||    
T  27419394 agaatgcaaaagatttatgttgatttgagaatccaaggaataatgtatatatagtttctaagggcct-ctacaaaccaattaatcagtgaatgtaatttg 27419492  T
Q  688 atggattgtaatagagtctagttaggtacaagggttcacatggtattgtcttatagaggtcattttcaaggattagatgaagctaaatataagaacatgc 787  Q
     ||   ||| |||| ||| ||| | | ||||||| ||||||||||||||| |||| |  |  ||||||||||||||  |||||| |||  |||| |||||    
T  27419493 gtgagctgtgatagggtcaagtgaaggacaagggatcacatggtattgtcctatacatat-tttttcaaggattag--gaagcttaatggaagagcatgc 27419589  T
Q  788 aaatactctaccttctgagataatggccaaca 819  Q
    | |||| | || || |||||||||||||||||    
T  27419590 acataccccacattgtgagataatggccaaca 27419621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 186 - 498
Target Start/End: Original strand, 27411379 - 27411690
Alignment:
Q  186 ctaatctatctaaatctccattagcatgatctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacc 285  Q
    ||||||||||| ||||||||||||| |||| || || ||| | ||| ||||| || || ||| ||||||||||||||| |||||||||||||||||||||    
T  27411379 ctaatctatcttaatctccattagcttgatttacagttcact-caaacgagatgtgaggttttggaattcatcctcgctgcaaggaattgtgagaccacc 27411477  T
Q  286 cataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccgtctcatt 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||||    
T  27411478 cataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaacgatggttggttcaagtatgatactggaatcacgaaccgtctcatt 27411577  T
Q  386 ctatcgccaacatacactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattctgataagctttgcta 485  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27411578 ctatctccaacatagactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattctaataagctttgcta 27411677  T
Q  486 tgcggaaacccat 498  Q
    |||||||||||||    
T  27411678 tgcggaaacccat 27411690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 174 - 793
Target Start/End: Complemental strand, 27567485 - 27566870
Alignment:
Q  174 aattagcttcaactaatctatctaaatctccattagcatgatctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaat 273  Q
    ||||||| ||||||| |||||||||||||||||| |||||| ||  ||||||||||||| ||||||| || | || |||  |||| |||| |||||||||    
T  27567485 aattagcctcaactattctatctaaatctccatttgcatgaccttcagctcaattcaagtgagaagtgagttctaagaaagcatcttcgctgcaaggaat 27567386  T
Q  274 tgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatcaca 373  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||||||     
T  27567385 tgtgagaccacccattggatgatcataaccaaattcttcttctgtttgatttagtaattcttgaaacgatggttggttcaagtatgatactggaatcacg 27567286  T
Q  374 aaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattctga 473  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||| | || |||    
T  27567285 aaccgtctcattctatctccaacatagactgcgagatagccttttgggacttcaaatcccttgctagatccttgagttttggaaaatgatgcccttttga 27567186  T
Q  474 taagctttgctatgcggaaacccattgtttttattatttatggt-tcctcacnnnnnnnntactgatgatggcagaggattggatgagaaagaaatattt 572  Q
    |||   | ||||| |||||||||||||||||     ||||||||  |  ||         ||||||| |||  |||||||||||||||||||||||||||    
T  27567185 taatactggctatacggaaacccattgtttt-----tttatggtagcaccaaaaaaaaaatactgattatgttagaggattggatgagaaagaaatattt 27567091  T
Q  573 gagtttttataactcagaatggaaaagatttgtgttgctttgagaactcaaggaata--gtgtatatatagttgctaagggtctgaaacaaaccaattaa 670  Q
    || || | || | | |  ||| |||||| ||||| ||  ||||||||| || |||||  || ||||||||||||||||||| |||  |||||||| |||     
T  27567090 gaattctgatgatttatgatgcaaaagacttgtggtg-attgagaactaaaagaataatgtatatatatagttgctaagggcctg-tacaaaccacttag 27566993  T
Q  671 ccaatgaatgtattttgatggattgtaatagagtctagttaggtacaagggttcacatggtattgtcttatagaggtcattttcaaggattagatgaagc 770  Q
    |||||||| || || |||||   ||| |||| | ||| | ||| || |||| |||||||| ||||| | || || |||||||||||| |||||||||||     
T  27566992 ccaatgaaagtgttgtgatgagctgtgatagggcctactgagggaccagggatcacatggcattgtatcatggaagtcattttcaagcattagatgaaga 27566893  T
Q  771 taaatataagaacatgcaaatac 793  Q
    |||||  ||||||||||| ||||    
T  27566892 taaatggaagaacatgcacatac 27566870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 174 - 510
Target Start/End: Original strand, 27414212 - 27414550
Alignment:
Q  174 aattagcttcaactaatctatctaaatctccattagcatgat--ctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaagga 271  Q
    ||||||| |||||||||||||||||| |||| ||||||| ||  ||| ||||||||||| ||||||||| || ||| |||||||||| || | ||| |||    
T  27414212 aattagcctcaactaatctatctaaagctccgttagcataatatctacagctcaattcatgcgagaagtgaggttttggaattcatcttcactgcacgga 27414311  T
Q  272 attgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatca 371  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||  |||||||    
T  27414312 attgtaagaccacccattggatgatcatatccaaattcttcttctgattgatttagtaattcttgaaatgagggttggttcaagtatgatacaggaatca 27414411  T
Q  372 caaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattct 471  Q
    |||||||||||||| |||| ||||| || ||||| |||||||||||||| ||||||| ||||||| ||||| ||||||||   |||||||||||| ||||    
T  27414412 caaaccgtctcattttatctccaacgtagactgcaagatagccttttggcacttcaaatcccttgctagatgcttgtgttgacgaaaatgatggctttct 27414511  T
Q  472 gataagctttgctatgcggaaacccattgtttttattat 510  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  27414512 gataagctttgctatgcggaaacccattgttttttttat 27414550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 173 - 505
Target Start/End: Original strand, 27421841 - 27422176
Alignment:
Q  173 taattagcttcaactaatctatctaaatctccattagcatgatctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaa 272  Q
    |||||||| | ||||||||||||||| |||  ||||||||||| ||  ||||||||||| |||||||| || | || |||   ||| || | ||||||||    
T  27421841 taattagccttaactaatctatctaagtctg-attagcatgatttacggctcaattcaatcgagaagtgagttgtaagaaagaatcttcactgcaaggaa 27421939  T
Q  273 ttgtgagaccacccataggatgatcatatcc----aaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||||||||| | |||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27421940 ttgtgagaccacccgttggatgatcgtatccatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgatactggaa 27422039  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcat 468  Q
    |||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |||  |||||||||||||||    
T  27422040 tcacgaaccgtttcattctatctccaacatagactgcgagatagccttttgggacttcaaatcccttggtagatgcttgcgttgaggaaaatgatggcat 27422139  T
Q  469 tctgataagctttgctatgcggaaacccattgttttt 505  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27422140 tctgataagttttgctatgcggaaacccattgttttt 27422176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 184 - 505
Target Start/End: Original strand, 27424432 - 27424755
Alignment:
Q  184 aactaatctatctaaatctccattagcatgat--ctagagctcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagac 281  Q
    ||||||||||| | |||||| |||||||||||  ||| ||||||||||| ||||||||| || ||| ||||||||||||||| ||| ||||| || ||||    
T  27424432 aactaatctatattaatctctattagcatgatatctacagctcaattcatgcgagaagtgaggtttcggaattcatcctcgctgcacggaatggtaagac 27424531  T
Q  282 cacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccgtct 381  Q
    ||||||| ||||||||||||||| |||||||||| | ||||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||| ||    
T  27424532 cacccattggatgatcatatccatattcttcttcagattgatttagcaattcttgaaatgaaggttggttcaagtatgatactggaatcacaaaccgcct 27424631  T
Q  382 cattctatcgccaacatacactgcgagatagccttttgggacttcaagtcccttggtagattcttgtgttttggaaaatgatggcattctgataagcttt 481  Q
    ||||  ||| |||||||| |||||||||||||||||||||||||| | ||| ||  ||||| ||||||||   |||||||||||||||||||||||||||    
T  27424632 catttgatctccaacatagactgcgagatagccttttgggacttcgaatcctttactagatgcttgtgttgacgaaaatgatggcattctgataagcttt 27424731  T
Q  482 gctatgcggaaacccattgttttt 505  Q
    ||||||||||||||||||||||||    
T  27424732 gctatgcggaaacccattgttttt 27424755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 269 - 427
Target Start/End: Original strand, 27556384 - 27556542
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||  |||| |  ||||    
T  27556384 ggaattgtgagaccacccatagaatgatcatatccaaattcttcttctgcttgatgtagtaattcttgaaatgaaggttggttcaataatgaaatgggaa 27556483  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttca 427  Q
    ||||||| ||  ||||| | || |||||||| |||||||||||||||||||||||||||    
T  27556484 tcacaaatcgcttcattttttctccaacataaactgcgagatagccttttgggacttca 27556542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 552 - 793
Target Start/End: Original strand, 27422210 - 27422448
Alignment:
Q  552 ttggatgagaaagaaatatttgagtttttataactcagaatggaaaagatttgtgttgctttgagaactcaaggaatagtgtatatatagttgctaaggg 651  Q
    ||||||||||||||||||||||| || | |||| | |  ||| |||||| ||||||| ||| |||| | ||| || ||||||||| ||||||||||||||    
T  27422210 ttggatgagaaagaaatatttgaattctgataatttatgatgcaaaagacttgtgttactt-gagacc-caaagagtagtgtataaatagttgctaaggg 27422307  T
Q  652 tctgaaacaaaccaattaaccaatgaatgtattttgatggattgtaatagagtctagttaggtacaagggttcacatggtattgtcttatagaggtcatt 751  Q
     ||  | ||||||||||| |||||||| |||||||||||   ||| |||| | ||||| ||| ||||| | |||||||||||||||||||||| ||||||    
T  27422308 actcta-caaaccaattagccaatgaaagtattttgatgagctgtgatagggcctagtgagggacaagagatcacatggtattgtcttatagaagtcatt 27422406  T
Q  752 ttcaaggattagatgaagctaaatataagaacatgcaaatac 793  Q
    |||||||||||||||||| |||||  ||||||||||||||||    
T  27422407 ttcaaggattagatgaagttaaatggaagaacatgcaaatac 27422448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 265 - 426
Target Start/End: Original strand, 27478884 - 27479045
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||| |    
T  27478884 gcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggttcaagtatgatatt 27478983  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    || |  ||||||||  ||  | | || |||||||||||||| | |||||| ||||| |||||    
T  27478984 gggacaacaaaccgcttctgtttctctccaacatacactgcaacatagccctttggaacttc 27479045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 265 - 426
Target Start/End: Original strand, 27485944 - 27486105
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||| |    
T  27485944 gcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggttcaagtatgatatt 27486043  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    || |  ||||||||  ||  | | || |||||||||||||| | |||||| ||||| |||||    
T  27486044 gggacaacaaaccgcttctgtttctctccaacatacactgcaacatagccctttggaacttc 27486105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 27506837 - 27506724
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||||||| |||||||||| |    
T  27506837 gcaaggaatggtgagtccacccatgggatgatcatatccaaattcttcttccgcttgatgtagcaattcttgaaacaatggttggtttaagtatgatatt 27506738  T
Q  365 ggaatcacaaaccg 378  Q
    || |||||||||||    
T  27506737 gggatcacaaaccg 27506724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 265 - 379
Target Start/End: Complemental strand, 27412803 - 27412689
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| ||||||||||||||||| |||||||| |||||| | | ||| ||||||||||||||||||||||||||||||| |    
T  27412803 gcaaggaatggtgaggccacccattggatgatcatatccaaactcttcttcagcttgactcaataagtcttgaaataatggttggttcaagtatgatatt 27412704  T
Q  365 ggaatcacaaaccgt 379  Q
    || ||||||||||||    
T  27412703 gggatcacaaaccgt 27412689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 223 - 420
Target Start/End: Original strand, 27513735 - 27513932
Alignment:
Q  223 tcaattcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttga 322  Q
    |||||||||||||||||| | || || |||| | || || | ||||||||| |||||||||||||| |||||||||||| || ||| |||||| |||||     
T  27513735 tcaattcaagcgagaagtgatatctaagaatacttcttctctgcaaggaatagtgagaccacccattggatgatcatattcatattgttcttcagcttgg 27513834  T
Q  323 tttagtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |  |||||||| ||  | | ||||||||||||||||| ||| |||||||||||  ||||| | || || ||||||||||| ||||| ||||||||    
T  27513835 ttcaacaattcttggaacgaggtttggttcaagtatgatattgggatcacaaaccgcttcattttctctcctacatacactgctagatatccttttgg 27513932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 552 - 798
Target Start/End: Original strand, 27414562 - 27414809
Alignment:
Q  552 ttggatgagaaagaaatatttgagtttttataactcagaatggaaaagatttgtgttgctttgagaactcaaggaatag-tgtatatatagttgctaagg 650  Q
    ||||||||||||||  ||||||| || | |||| | || ||| |||||| ||||||||||| |||||| ||| |||||| ||||||||||||||| ||||    
T  27414562 ttggatgagaaagatttatttgaattatgataatttaggatgcaaaagacttgtgttgctt-gagaacacaatgaataggtgtatatatagttgccaagg 27414660  T
Q  651 gtctgaaacaaaccaattaaccaatgaatgtattttgatggattgtaatagagtctagttaggtacaagggttcacatggtattgtcttatagaggtcat 750  Q
    | ||  |  ||| |||| | |||||| | | |||||||||   ||| |||| | ||||| ||| ||||||| ||||||||||||||| |||||| |||||    
T  27414661 gactctacaaaatcaatcagccaatggaagcattttgatgagctgtgatagggcctagtgagggacaagggatcacatggtattgtcctatagaagtcat 27414760  T
Q  751 tttc-aaggattagatgaagctaaatataagaacatgcaaatactctac 798  Q
    |||| ||  |||||||||||||||||  ||||||||||| |||| ||||    
T  27414761 tttcaaactattagatgaagctaaatggaagaacatgcacataccctac 27414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 27444795 - 27444907
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    |||||||||||||||||||||||| ||||| |||||||| |||| ||| || |||||||| | ||||||||||||| ||| |||| |||||||||||| |    
T  27444795 gcaaggaattgtgagaccacccattggatggtcatatccgaattgttcctcggcttgattcaataattcttgaaatgatgattggctcaagtatgatatt 27444894  T
Q  365 ggaatcacaaacc 377  Q
    || ||||||||||    
T  27444895 gggatcacaaacc 27444907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 226 - 377
Target Start/End: Original strand, 27431110 - 27431261
Alignment:
Q  226 attcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgattt 325  Q
    |||||| |||||||||| ||||| |||  | || || | |||||||||||||||||||||  | ||||| ||||||||||||| ||| || ||||||||     
T  27431110 attcaaacgagaagtaatatttaagaaaacgtcttctctgcaaggaattgtgagaccaccggttggatggtcatatccaaattgttcctcggcttgattc 27431209  T
Q  326 agtaattcttgaaataatggttggttcaagtatgataatggaatcacaaacc 377  Q
    |  |||||||||||| | ||||||||||||||||||| ||| ||||||||||    
T  27431210 aacaattcttgaaatgacggttggttcaagtatgatattgggatcacaaacc 27431261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 27563347 - 27563444
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||| | || || |||||||| |||| |||||||||||||||||    
T  27563347 gcaaggaattgtgaggccacccattggatgatcatatccaaactcttcttcggcttgactcagcaaatcttgaaacaatgtttggttcaagtatgata 27563444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 27487122 - 27486967
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| || ||||||||||| |||||||||||| |||||| |||||| ||||| || |  |||||||||||  |||||||||| |||||||||||     
T  27487122 gcaaggaatagtaagaccacccattggatgatcatattcaaattgttcttcagcttggttcaacaattcttgaaacgatggttggtttaagtatgataaa 27487023  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |||||||||||  ||||| | || || || |||||||| ||||| || |||||    
T  27487022 gggatcacaaaccgcttcattttctctcctacgtacactgctagatatccctttgg 27486967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 27585827 - 27585717
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| |||||||| ||||| ||||||||||||||||| |||||||| |||||| | |  || |||||||| ||||||||||||||||||||||      
T  27585827 gcaaggaatggtgagacctcccattggatgatcatatccaaactcttcttcggcttgactcatcaaatcttgaaacaatggttggttcaagtatgatacg 27585728  T
Q  365 ggaatcacaaa 375  Q
    || ||||||||    
T  27585727 gggatcacaaa 27585717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 265 - 355
Target Start/End: Complemental strand, 27595524 - 27595434
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaag 355  Q
    |||||||||||| ||||||||||| |||||||   ||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  27595524 gcaaggaattgtaagaccacccatgggatgattgaatccaaactctttttctgcttgacttagtaattcttgaaataatggtcggttcaag 27595434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 265 - 422
Target Start/End: Original strand, 27559241 - 27559398
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||  ||| ||| | ||||||| | | ||| |||||  |||| |      
T  27559241 gcaaggaattgtgagaccacccattggatgatcatatccaaactcttcttctgattggcttaataactattgaaatgaagattgattcaataatgaaata 27559340  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttggga 422  Q
    ||||||| ||| |   ||||| | || |||||||| ||||||||||||||||||||||    
T  27559341 ggaatcagaaatctcttcattttgtctccaacataaactgcgagatagccttttggga 27559398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 226 - 378
Target Start/End: Complemental strand, 27425990 - 27425838
Alignment:
Q  226 attcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgattt 325  Q
    |||||||||||| || | || | | ||| ||||||||  ||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||   |||| |     
T  27425990 attcaagcgagatgtcatatgttgaaatacatcctcggtgcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaaattgactc 27425891  T
Q  326 agtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccg 378  Q
    | ||| ||||||||| ||||||||||||||||||||| ||| |||||| ||||    
T  27425890 aataagtcttgaaatgatggttggttcaagtatgatattgggatcacataccg 27425838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 269 - 377
Target Start/End: Complemental strand, 27557624 - 27557516
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    ||||| |||||||||||||| |||||| ||||| |||||| ||| || |||||||| || |||||||||||| |||||||||| |||||||| | ||| |    
T  27557624 ggaatagtgagaccacccattggatgaacatattcaaattgttcctcagcttgattcagcaattcttgaaatgatggttggtttaagtatgacattggga 27557525  T
Q  369 tcacaaacc 377  Q
    |||||||||    
T  27557524 tcacaaacc 27557516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 27526113 - 27526268
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| |||||||||||| | |||||||||||| |||||| ||| || |||||  | |  |||||||| ||| | | |||||||||||||||||      
T  27526113 gcaaggaatagtgagaccacccgttggatgatcatattcaaattgttcctcagcttggctcaacaattcttggaatgaggtttggttcaagtatgataca 27526212  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    ||||||||||||||  ||||| | || |||||||||||||| ||||| || |||||    
T  27526213 ggaatcacaaaccgcttcattttctctccaacatacactgctagatatccctttgg 27526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 27480040 - 27479885
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| |||||||||||||| |||||||||||| |||||| ||| || ||||| || |  || | ||| ||| ||| |||||||||||||||||      
T  27480040 gcaaggaatggtgagaccacccattggatgatcatattcaaattgttcctcagcttggttcaacaacttttggaatgatgtttggttcaagtatgataca 27479941  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    ||||||||||| ||  ||||| | || || || || ||||| ||||||||||||||    
T  27479940 ggaatcacaaaacgcttcattttctctcctacgtatactgctagatagccttttgg 27479885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 266 - 385
Target Start/End: Complemental strand, 27501455 - 27501336
Alignment:
Q  266 caaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatg 365  Q
    |||||||| |||||||||||| | |||||||| ||| |||||| ||| || ||||| || |  || |||||||| ||||||||||| |||||||||| ||    
T  27501455 caaggaatagtgagaccacccgttggatgatcgtattcaaattgttcctcggcttggttcaacaagtcttgaaacaatggttggtttaagtatgatattg 27501356  T
Q  366 gaatcacaaaccgtctcatt 385  Q
    | |||||||||||| |||||    
T  27501355 ggatcacaaaccgtttcatt 27501336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 27505703 - 27505858
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| |||||||||||||| ||||| |||||| |||||| ||| || ||||| || |  |||||||| ||| | | |||||||||||||||||      
T  27505703 gcaaggaatagtgagaccacccattggatggtcatattcaaattgttcctcagcttggttcaacaattcttggaatgaggtttggttcaagtatgataca 27505802  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    ||||||||||||||  ||||| | || || || |||||||| ||||| || |||||    
T  27505803 ggaatcacaaaccgcttcattttctctcctacgtacactgctagatacccctttgg 27505858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 426
Target Start/End: Complemental strand, 27527281 - 27527139
Alignment:
Q  284 cccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaatcacaaaccgtctca 383  Q
    ||||| ||||||||||||||||| ||||| || |||||| | || || ||| ||||  |||||||||| |||| ||||| ||| |||||||||||| ||     
T  27527281 cccatgggatgatcatatccaaactcttcctcagcttgactcagcaactctagaaacgatggttggtttaagtgtgatattgggatcacaaaccgtttct 27527182  T
Q  384 ttctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
     | |||| ||||||||||| || |||||||| ||||| |||||    
T  27527181 gtttatctccaacatacaccgcaagatagccctttggtacttc 27527139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 263 - 420
Target Start/End: Complemental strand, 27498556 - 27498399
Alignment:
Q  263 ccgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||||| |||||||||||||| |||||||||||| | |||| ||| || ||||| || |  || ||||| ||  |||||||||||||||||||||    
T  27498556 ccgcaaggaatagtgagaccacccattggatgatcatattcgaattgttcctcggcttggttcaacaagtcttggaacgatggttggttcaagtatgata 27498457  T
Q  363 atggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
      || |||||||| ||| |||||   || |||||||| ||||| ||||| || |||||    
T  27498456 tagggatcacaaaacgtttcatttcctctccaacatatactgctagatatccctttgg 27498399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 27504061 - 27503964
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||| ||||| |||||||| ||||||||||||||||| ||||| || |||||| | |  || ||||||||| | |||||||||||||||||||    
T  27504061 gcaaggaatggtgaggccacccattggatgatcatatccaaactcttcctcggcttgactcaacaagtcttgaaatgaaggttggttcaagtatgata 27503964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 27476826 - 27476671
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| || ||||||||||| |||||||||||| |||||| ||| ||   |||  | || | |||||| ||| | | |||||||||||||||||      
T  27476826 gcaaggaatagttagaccacccattggatgatcatattcaaattgttcctcactttggctcagcagttcttggaatgaggtttggttcaagtatgataca 27476727  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    ||||||||||||||  ||||| | || |||||||||||||| ||||| || |||||    
T  27476726 ggaatcacaaaccgcttcattttctcaccaacatacactgctagatatccctttgg 27476671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 27554447 - 27554364
Alignment:
Q  266 caaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttgg 349  Q
    |||||||||||||||| |||| | ||||||||||||||||||| ||| || |||||||| || |||||||||||  ||||||||    
T  27554447 caaggaattgtgagactacccgttggatgatcatatccaaattgttcctcagcttgattcagcaattcttgaaacgatggttgg 27554364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 27415760 - 27415650
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| | ||||||||||||||| ||||| || |||||| | |  || ||||||||  |||||||||||||||||||||      
T  27415760 gcaaggaatggtgaggccacccatggaatgatcatatccaaactcttcctcagcttgactcaacaagtcttgaaacgatggttggttcaagtatgatatg 27415661  T
Q  365 ggaatcacaaa 375  Q
    || ||||||||    
T  27415660 gggatcacaaa 27415650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 27468328 - 27468425
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||| || | |||| | |  || ||||||||| | |||||||| ||||||||||    
T  27468328 gcaaggaatggtgaggccacccatgggatgatcatatccaaattcttcctcggattgactcaacaagtcttgaaatgaaggttggtttaagtatgata 27468425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 27475580 - 27475677
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||| ||||| |||||||| ||||||||||||||||| ||||| || |||||| | |  || ||||||||| | ||||| |||||||||||||    
T  27475580 gcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcggcttgactcaacaagtcttgaaatgaaggttgattcaagtatgata 27475677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 269 - 362
Target Start/End: Complemental strand, 27524659 - 27524566
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||| ||||| |||||||| ||||||||||||||||| ||||| || |||||||| |  || ||||||||| | ||||||||||| |||||||    
T  27524659 ggaatggtgaggccacccattggatgatcatatccaaactcttcctcagcttgattcaacaagtcttgaaatgaaggttggttcaaatatgata 27524566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 27490096 - 27490004
Alignment:
Q  268 aggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatga 360  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||||| || |||||||| |  || ||||||||| |||||| ||| ||||||||    
T  27490096 aggaatggtgaggccacccattggatgatcatatccaaactcttcctcggcttgattcaacaaatcttgaaatgatggtttgtttaagtatga 27490004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 27515029 - 27514933
Alignment:
Q  266 caaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||| || | |||| | |  || ||||||||| | ||||| |||||||||||||    
T  27515029 caaggaatggtgaggccacccatgggatgatcatatccaaattcttcctcggattgactcaacaagtcttgaaatgaaggttgattcaagtatgata 27514933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 427
Target Start/End: Complemental strand, 27446286 - 27446124
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| | ||||||| ||||  ||||||||||| |||| |||||||||| |||  |||   | ||||||||| | ||||| |||||  ||||   |    
T  27446286 gcaaggaatcgagagaccatccattcgatgatcatattcaaactcttcttctgattggcttaacgactcttgaaatgaaggttgattcaataatgaagtt 27446187  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttca 427  Q
    ||||||||||| ||  ||||| | || |||||||| || || |||||||||||||||||||||    
T  27446186 ggaatcacaaatcgcttcattttttctccaacataaaccgcaagatagccttttgggacttca 27446124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 27420547 - 27420450
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||| ||||| |||||||| ||||||||||||||||| ||||| ||  ||||| | || ||  |||||||| | |||||| ||||||||||||    
T  27420547 gcaaggaatggtgaggccacccatgggatgatcatatccaaactcttcctcaacttgactcagcaagccttgaaatgaaggttggctcaagtatgata 27420450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 265 - 426
Target Start/End: Original strand, 27497323 - 27497484
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||  | ||||||||||||||||| ||||| || |||||| | |  || | |||||| ||||||||||| |||||||| |      
T  27497323 gcaaggaatggtgaggccacctgtgggatgatcatatccaaactcttcctcagcttgactcaacaaatattgaaacaatggttggtttaagtatgagata 27497422  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    || |||||||||||  |   | |||| |||||||||||||| | |||||| ||||| |||||    
T  27497423 gggatcacaaaccgcttttgtttatctccaacatacactgcaacatagccctttggaacttc 27497484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 375
Target Start/End: Original strand, 27565913 - 27566062
Alignment:
Q  226 attcaagcgagaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgattt 325  Q
    |||||||| |||||| | || | ||||  |||| ||||| |||||||| ||||| |||||||| |||||||||||||||   ||||| ||  ||||  |     
T  27565913 attcaagcaagaagttatatgttggaagacatcttcgccacaaggaatggtgaggccacccattggatgatcatatccatgctcttcctcaacttgtatc 27566012  T
Q  326 agtaattcttgaaataatggttggttcaagtatgataatggaatcacaaa 375  Q
    || || |||||||| ||||||||||||| ||||||||  || ||||||||    
T  27566013 agcaagtcttgaaacaatggttggttcaggtatgatatggggatcacaaa 27566062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 27570050 - 27570147
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||| ||||| |||||||| |||||||||||||| || ||||| || |||||| | || || ||||||||| | |||||| | ||||||||||    
T  27570050 gcaaggaatggtgaggccacccatgggatgatcatatccgaactcttcctcagcttgactcagcaagtcttgaaatgaaggttggcttaagtatgata 27570147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 266 - 378
Target Start/End: Original strand, 27502809 - 27502921
Alignment:
Q  266 caaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatg 365  Q
    |||||||| || ||||||||||| ||||| |||||||||||||||||  | |||||  | || || ||||||||| | | ||| ||||| ||||| | ||    
T  27502809 caaggaatagtaagaccacccattggatggtcatatccaaattcttccacagcttggctcagcaagtcttgaaatgaagtttgattcaaatatgacattg 27502908  T
Q  366 gaatcacaaaccg 378  Q
    |||||||||||||    
T  27502909 gaatcacaaaccg 27502921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 17970438 - 17970343
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatga 360  Q
    ||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||  || | || || | ||||||| | | |||||||||||||||    
T  17970438 gcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttggttcaagtatga 17970343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 612 - 793
Target Start/End: Original strand, 27424835 - 27425026
Alignment:
Q  612 ttgagaactcaaggaatagtgtatatatagttgctaagggtctgaaacaaaccaattaaccaatgaatgtattttgatggattgtaatagagtctagtta 711  Q
    |||||||| || ||||||||||||||||||  |||||||  ||  |  ||| |||||| |||||||| |||||||| ||   ||| |||| | ||||| |    
T  27424835 ttgagaacccatggaatagtgtatatatagaagctaaggaactctacaaaatcaattagccaatgaaagtattttggtgagctgtgatagggcctagtga 27424934  T
Q  712 ggtacaagggttcacatggtatt--------gtcttatagaggtcattttcaaggat--tagatgaagctaaatataagaacatgcaaatac 793  Q
     | ||||||| ||||||||||||        |||||||||| |||||||||||||||  ||||||||| |||||  |||||||| |||||||    
T  27424935 cggacaagggatcacatggtattgtactattgtcttatagaagtcattttcaaggattatagatgaagttaaatggaagaacattcaaatac 27425026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 27507815 - 27507861
Alignment:
Q  266 caaggaattgtgagaccacccataggatgatcatatccaaattcttc 312  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  27507815 caaggaattgtaagaccacccattggatggtcatatccaaattcttc 27507861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 27600692 - 27600642
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttc 315  Q
    |||||||||||||||||||||||| |||||||  || ||||||||||||||    
T  27600692 gcaaggaattgtgagaccacccattggatgattgtaaccaaattcttcttc 27600642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 940
Target Start/End: Original strand, 27419645 - 27419754
Alignment:
Q  831 acaatgcattggtgaaaaagacctgatgtttgttaatgcattttggtatagttgatccactggtagacatactacagacatatctcatgtttcttcagat 930  Q
    |||||||| |||||||| | ||||||||||| ||  ||||||| ||||||| | ||||| | |||||||| ||  |||||| || |||||||||||  ||    
T  27419645 acaatgcaatggtgaaagaaacctgatgttttttcttgcatttgggtatagataatccaattgtagacatgctttagacatctcacatgtttcttctaat 27419744  T
Q  931 tgacaatgca 940  Q
    ||||| ||||    
T  27419745 tgacattgca 27419754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 27423361 - 27423264
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgata 362  Q
    ||||||||  ||||| |||||||| |||||||  || ||||| ||||| || |||||| | |  |||||||||||| | |||||||||||||||||||    
T  27423361 gcaaggaacggtgaggccacccatgggatgattgtaaccaaactcttcctcggcttgactcaacaattcttgaaatgaaggttggttcaagtatgata 27423264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 27474033 - 27473988
Alignment:
Q  263 ccgcaaggaattgtgagaccacccataggatgatcatatccaaatt 308  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||    
T  27474033 ccgcaaggaatggtgagaccacccattggatgatcatattcaaatt 27473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 27460617 - 27460574
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaatt 308  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||    
T  27460617 gcaaggaatggtgagaccacccattggatgatcatattcaaatt 27460574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 27466960 - 27466917
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaatt 308  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||    
T  27466960 gcaaggaatagtgagaccacccattggatgatcatattcaaatt 27466917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 27469599 - 27469444
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| || ||||||||||| ||||| |||||| |||||| |||||| |||||  | |  | |||||| ||| ||| ||| ||||| |||||||      
T  27469599 gcaaggaatagttagaccacccattggatgttcatattcaaattgttcttcagcttggctcaacagttcttgtaatgatgtttgcttcaaatatgatata 27469500  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |||||||||||  ||||| | || || || |||||||| ||||| || |||||    
T  27469499 gggatcacaaaccgcttcattttctctcctacgtacactgctagatatccctttgg 27469444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 27495675 - 27495620
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgctt 320  Q
    ||||||||| |||||||||||||| ||||||| | ||||||| |||||||| ||||    
T  27495675 gcaaggaatggtgagaccacccattggatgattaaatccaaactcttcttcagctt 27495620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 360
Target Start/End: Complemental strand, 27508987 - 27508896
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatga 360  Q
    ||||| ||||| |||||| | ||||||||||||||||| ||||| || || ||||| |  || ||||||||| | ||||||||||| |||||    
T  27508987 ggaatggtgaggccacccgttggatgatcatatccaaactcttcctcagcctgattcaacaagtcttgaaatgaaggttggttcaaatatga 27508896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 838 - 900
Target Start/End: Original strand, 27425068 - 27425130
Alignment:
Q  838 attggtgaaaaagacctgatgtttgttaatgcattttggtatagttgatccactggtagacat 900  Q
    |||||||||| | ||||||||||||||| || |||||||||||| | || || ||||||||||    
T  27425068 attggtgaaagaaacctgatgtttgttattgaattttggtatagctaatgcaatggtagacat 27425130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 27577453 - 27577407
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttc 315  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||||    
T  27577453 ggaattgtgagaccacccatagggtgattgaatccaaattcttcttc 27577407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 1e-22; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 1756758 - 1756913
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| || ||||||||||||||||||||||| |||||| | |  || | ||||||  ||||||||||||||||||||| |    
T  1756758 gcaaggaatggtgaggccacccatggggtgatcatatccaaattcttcttcagcttgactcaacaagtattgaaacgatggttggttcaagtatgatatt 1756857  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |||||||||||  ||  | | || ||||||| |||||| |||||||| |||||    
T  1756858 gggatcacaaaccgcttctgtttctctccaacattcactgcaagatagccctttgg 1756913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 435
Target Start/End: Original strand, 1755967 - 1756166
Alignment:
Q  236 gaagtaagatttaggaattcatcctcgccgcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattctt 335  Q
    |||||||  |||| || |||||||||   ||| ||||||||||||||| |  | |||||||||||||  ||||  |||||||||||   |||||||||||    
T  1755967 gaagtaaagtttaagatttcatcctccttgcatggaattgtgagaccaacagttggatgatcatatctgaattgctcttctgcttggcatagtaattctt 1756066  T
Q  336 gaaataatggttggttcaagtatgataatggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttcaagtccctt 435  Q
    ||||| | ||||| ||||||||||||| || |||||| | | |  |||||| |||  ||||||| ||||| || ||||||||   |||||||| ||||||    
T  1756067 gaaattaaggttgattcaagtatgatattgaaatcactatctgcttcattcgatcttcaacatagactgcaaggtagcctttctagacttcaaatccctt 1756166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 266 - 420
Target Start/End: Original strand, 1754243 - 1754397
Alignment:
Q  266 caaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatg 365  Q
    |||||||| |||||||||||||| |||||||||||| |||| | ||| || | ||  ||||| |||| ||||||| | | |||||||||||||||||  |    
T  1754243 caaggaatagtgagaccacccatcggatgatcatattcaaactgttcctcagatttgtttagcaatttttgaaatgacgattggttcaagtatgatacgg 1754342  T
Q  366 gaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    | |||||||||||  |||||   || |||||||| || || ||||| ||||||||    
T  1754343 ggatcacaaaccgcttcatttcttctccaacatatacagctagatatccttttgg 1754397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 3e-20; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 55084925 - 55084770
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||| || ||  || | |  || ||||||||| |||||||||||||||| || |      
T  55084925 gcaaggaattgtgaggccacccattggatgatcgtatccaaattcttcctccgcccgactcaacaagtcttgaaatgatggttggttcaagtaagacata 55084826  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |||||||||||  ||||| | || |||||||||||||| ||| | ||||||||    
T  55084825 gggatcacaaaccgcttcattttctctccaacatacactgcaagacacccttttgg 55084770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 38032417 - 38032260
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||| ||||| ||||| ||||||  ||| || ||||| ||||| | |||  | || |||||||||||||| || |  |||||| |||||| |||||    
T  38032417 ggaattgtaagaccgcccattggatgacaataaccgaattcctcttcagattggctaagcaattcttgaaataaaggctcattcaagaatgatactggaa 38032318  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    ||| ||||| ||||||| | || |||||||||||||| |||||||||||||| |||||    
T  38032317 tcataaaccttctcattttctctccaacatacactgcaagatagccttttggaacttc 38032260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 38035190 - 38035033
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||||||||||||||| ||||||  ||| || ||||| ||||| |||||  | || |||||||||||||| || |  |||||| |||||| |||||    
T  38035190 ggaattgtgagaccacccattggatgacaataaccgaattcctcttcagcttggctaagcaattcttgaaataaaggctcattcaagaatgatattggaa 38035091  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    |||  |||| || |||| | || ||||||||||| || |||| |||||||||||||||    
T  38035090 tcatgaaccttcgcattttctctccaacatacaccgcaagatggccttttgggacttc 38035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 38038682 - 38038525
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||| ||||| ||||| ||||||  ||| || ||||| ||||| |||||  | || |||||||||||||| || |  |||||| |||||| |||||    
T  38038682 ggaattgtaagacctcccattggatgacaataaccgaattcctcttcagcttggctaagcaattcttgaaataaaggctcattcaagaatgatattggaa 38038583  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    |||  |||| ||||||| | || |||||||||||||| |||| |||||||||||||||    
T  38038582 tcatgaaccttctcattttctctccaacatacactgcaagatggccttttgggacttc 38038525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 50913631 - 50913474
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||| ||||||||||| ||||||   || |||||||| ||||| |||||  | || |||||||||||||| || |  |||||| |||||| |||||    
T  50913631 ggaattgtaagaccacccattggatgacagtagccaaattcctcttcagcttggctaagcaattcttgaaataaaggctcattcaagaatgatattggaa 50913532  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    |||  ||||   ||||| | || |||||||||||||| ||||||||||||||||||||    
T  50913531 tcaagaacctcttcattttctctccaacatacactgcaagatagccttttgggacttc 50913474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 38027590 - 38027433
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||| ||||||||||| ||||||  ||| || ||||| ||||| | |||  | || |||||||||||||| || |  |||||| ||||||  ||||    
T  38027590 ggaattgtaagaccacccattggatgacaataaccgaattcctcttcagattggctaagcaattcttgaaataaaggctcattcaagaatgatacgggaa 38027491  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    ||| ||||| ||||||| | || |||||||||||||| |||| ||||||||| |||||    
T  38027490 tcataaaccttctcattttctctccaacatacactgcaagatggccttttggaacttc 38027433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 38044042 - 38043929
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||| | || || ||||||||  | | ||| ||||||||||| |      
T  38044042 gcaaggaattgtgaggccgcccattggatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaacgaagtttgattcaagtatgacata 38043943  T
Q  365 ggaatcacaaaccg 378  Q
    || |||||||||||    
T  38043942 gggatcacaaaccg 38043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 38024876 - 38025031
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| || |||||||||||||||||||| ||||||||| | | ||| | ||||||  | | ||||||||||||||| |      
T  38024876 gcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttggttcaagtatgacatg 38024975  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || || ||||||||  |||||   || |||||||| ||||| |||||||| |||||    
T  38024976 gggataacaaaccgcttcatttgctctccaacatatactgcaagatagccctttgg 38025031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 38031328 - 38031483
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||| ||||| |||||||| || |||||||||||||||||||| ||||||||| | | ||| | ||||||  | | ||||||||||||||| |      
T  38031328 gcaaggaatcgtgaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaataagttttgaaaggaagcttggttcaagtatgacatg 38031427  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || || ||||||||  |||||   || |||||||| ||||| |||||||| |||||    
T  38031428 gggataacaaaccgcttcatttgctctccaacatatactgcaagatagccctttgg 38031483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 50910099 - 50910004
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatga 360  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| ||  ||||||| |  || | ||||||| | | |||||||||||||||    
T  50910099 gcaaggaattgtgaggccacccattggatgatcatatccaaattcttcctccacttgattcaacaagttttgaaatgaagcttggttcaagtatga 50910004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 50911870 - 50912025
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    |||||||||||| || |||||||| || |||||||||||||||||||| ||||||||| | |  || | ||||||| | | |||||||||||||||        
T  50911870 gcaaggaattgttaggccacccattgggtgatcatatccaaattcttcctctgcttgactcaacaagttttgaaatgaagcttggttcaagtatgacttg 50911969  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |||||||||||| ||||  | || |||||||| || || |||||||| |||||    
T  50911970 gggatcacaaaccgtttcatcttgtctccaacatataccgcaagatagccctttgg 50912025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 48840713 - 48840759
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattctt 311  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  48840713 gcaaggaattgtgaggccacccattggatgatcatatccaaattctt 48840759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 38028767 - 38028824
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttga 322  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||||||| || ||||||    
T  38028767 gcaaggaattgtgaggccgcccattggatggtcatatccaaattcttcctcggcttga 38028824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 50904793 - 50904885
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagta 357  Q
    ||||||||| ||||| |||||||| |||||||||||||| ||||| || |||||| || | |  || ||||||||| | | ||||||||||||    
T  50904793 gcaaggaatggtgaggccacccattggatgatcatatccgaattcatcctctgctcgactcaacaagtcttgaaatgaagtttggttcaagta 50904885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 420
Target Start/End: Original strand, 38036794 - 38036949
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataat 364  Q
    ||||||||||||||| || ||||| ||||| |||||||| |||||||| || |||||| | |  || | ||||||| | | ||||||||||||||  |      
T  38036794 gcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttgactcaacaaattttgaaatgaagcttggttcaagtatggcatg 38036893  T
Q  365 ggaatcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgg 420  Q
    || |  ||||||||| |||||   || ||||| |||||||| |||||||| |||||    
T  38036894 gggacaacaaaccgtttcatttgctctccaacgtacactgcaagatagccctttgg 38036949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 38040082 - 38040139
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttga 322  Q
    ||||||||||||||| || ||||| ||||| |||||||| |||||||| || ||||||    
T  38040082 gcaaggaattgtgaggccgcccattggatggtcatatccgaattcttcctcggcttga 38040139  T

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Target: chr8 (Bit Score: 50; Significance: 4e-19; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 269 - 426
Target Start/End: Complemental strand, 21608392 - 21608235
Alignment:
Q  269 ggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatgataatggaa 368  Q
    |||||||| ||||| ||||| ||||||  ||| || ||||| ||||| |||||  | || |||||||||||||| || |  |||||| |||||| |||||    
T  21608392 ggaattgtaagacctcccattggatgacaataaccgaattcctcttcagcttggctaagcaattcttgaaataaaggctcattcaagaatgatattggaa 21608293  T
Q  369 tcacaaaccgtctcattctatcgccaacatacactgcgagatagccttttgggacttc 426  Q
    |||  |||| ||||||| | || |||||||||||||| |||||||||||||| |||||    
T  21608292 tcatgaaccttctcattttctctccaacatacactgcaagatagccttttggaacttc 21608235  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 21634682 - 21634608
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaa 339  Q
    ||||||||||||||  || |||||  |||||||||||||||||||||| ||||||||| | || || ||||||||    
T  21634682 gcaaggaattgtgaagccgcccattcgatgatcatatccaaattcttcctctgcttgactcagcaagtcttgaaa 21634608  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 21607297 - 21607354
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttga 322  Q
    ||||||||  ||||| |||||||| || |||||||||||||||||||| |||||||||    
T  21607297 gcaaggaaccgtgaggccacccattgggtgatcatatccaaattcttcctctgcttga 21607354  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 3073708 - 3073613
Alignment:
Q  265 gcaaggaattgtgagaccacccataggatgatcatatccaaattcttcttctgcttgatttagtaattcttgaaataatggttggttcaagtatga 360  Q
    ||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||  || | || || | ||||||| | | |||||||||||||||    
T  3073708 gcaaggaattgtgaggccacccattggatgatcgtatccgaattcttcctctgcccgactcagcaagtattgaaatgaagtttggttcaagtatga 3073613  T

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