View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16583_high_5 (Length: 433)
Name: NF16583_high_5
Description: NF16583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16583_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 22 - 418
Target Start/End: Original strand, 21573294 - 21573692
Alignment:
| Q |
22 |
aaaattaaagacaatgtggcacataactgaatacaaaatataacatcctaataataatgcctttaaatttaactaccaaatagaataatatccggaaaca |
121 |
Q |
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| T |
21573294 |
aaaattaaagacaatgtggcacataactgaatacaaaatataacatcctaataataatgcctttaaatttaactaccaaatagaataatatccggaaaca |
21573393 |
T |
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| Q |
122 |
ggtctacgatcctaaacatggttttaagtcagcaaccgcaatttccccgcgatataaagatttgcaatgtaaccgcaaccacgactacaagaataatttc |
221 |
Q |
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| T |
21573394 |
ggtctatgatcctaaacatggttttaagtcagcaaccgcagtttccccgcgatataaaggtttgcaatgtaaccgcaaccacgactacaagaataatttc |
21573493 |
T |
|
| Q |
222 |
aaaccatgatctaaatgaaatatactaaaataagtaacaatggatcatcatttattgatttgttatccacactaactagaaaaaactattgatgttcaaa |
321 |
Q |
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| T |
21573494 |
aaaccatgatctaaatgaaatatactaaaatgagtaacaatggatcatcatttattgatttgttatctacactaactagaaaaaactattgatgttcaaa |
21573593 |
T |
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| Q |
322 |
ttctctgcttcaatcttggctaccaacaaa--gtgtgagattgagtcttgaataccagaaaagccatttggtctataaacttgtaggaaattgaattct |
418 |
Q |
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|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21573594 |
ttctttgcttcaatcttggctaccaacaaagtgtgtgaggttgagtcttgaataccagaaaagccatttggtctataaacttgtaggaaattgaattct |
21573692 |
T |
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