View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16583_low_19 (Length: 278)
Name: NF16583_low_19
Description: NF16583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16583_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 1449754 - 1450016
Alignment:
| Q |
1 |
agaccttcattctcatttgactgattaagattaacatttttagaagaatttgaactccaatatttgactaaaagtggcatactgtatttattgtgaacag |
100 |
Q |
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| T |
1449754 |
agaccttcattctcatttgactgattaagatgaacatttttagaagaatttgaactccaatatttgactaaaagtggcatactgtatttattgtgaacag |
1449853 |
T |
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| Q |
101 |
gtggtattttataaaagactgcacaaagtatattttgttcatgcaattccaaagtctcctgcaggaaagatattgaggaaggacctgagagcaaagctag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
1449854 |
gtggtattttataaaagactgcacaaagtatattttgttcatgcaattccaaagtctcctgcaggaaagatattgaggaaggacctgaaagcaaagctag |
1449953 |
T |
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| Q |
201 |
aaagctccacctaaatgtcttagaagatatatagaagctttatcattcttttattgctgatat |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1449954 |
aaagctccacctaaatgtcttagaagatatatagaagctttatcattcttttattgctgatat |
1450016 |
T |
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