View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16583_low_8 (Length: 431)

Name: NF16583_low_8
Description: NF16583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16583_low_8
NF16583_low_8
[»] chr8 (3 HSPs)
chr8 (18-414)||(5088139-5088550)
chr8 (91-140)||(10727451-10727500)
chr8 (83-133)||(12361293-12361343)
[»] chr6 (5 HSPs)
chr6 (82-144)||(29249491-29249553)
chr6 (91-142)||(10452333-10452384)
chr6 (82-135)||(30536884-30536937)
chr6 (104-137)||(31776189-31776222)
chr6 (95-135)||(34882340-34882380)
[»] chr7 (6 HSPs)
chr7 (105-143)||(33266397-33266435)
chr7 (89-141)||(7087056-7087108)
chr7 (82-133)||(389936-389987)
chr7 (89-135)||(3019888-3019934)
chr7 (95-143)||(37064379-37064427)
chr7 (107-143)||(40371565-40371601)
[»] chr1 (3 HSPs)
chr1 (104-141)||(26866433-26866470)
chr1 (82-135)||(21002253-21002306)
chr1 (79-135)||(33723301-33723357)
[»] chr5 (7 HSPs)
chr5 (104-143)||(14331486-14331525)
chr5 (104-143)||(14932416-14932455)
chr5 (106-143)||(9174938-9174975)
chr5 (95-135)||(1773025-1773065)
chr5 (79-135)||(26004916-26004972)
chr5 (71-135)||(32194011-32194074)
chr5 (103-143)||(42646789-42646829)
[»] chr4 (2 HSPs)
chr4 (104-143)||(27043741-27043780)
chr4 (89-129)||(23676933-23676973)
[»] chr2 (5 HSPs)
chr2 (104-135)||(30331871-30331902)
chr2 (89-136)||(37419585-37419632)
chr2 (83-135)||(2790337-2790389)
chr2 (105-141)||(6772446-6772482)
chr2 (79-135)||(9996833-9996889)
[»] chr3 (6 HSPs)
chr3 (95-144)||(32582848-32582897)
chr3 (103-136)||(46407861-46407894)
chr3 (82-135)||(50211833-50211886)
chr3 (103-135)||(8007585-8007617)
chr3 (104-136)||(26990143-26990175)
chr3 (105-141)||(31615473-31615509)
[»] scaffold0024 (1 HSPs)
scaffold0024 (104-144)||(21208-21248)


Alignment Details
Target: chr8 (Bit Score: 345; Significance: 0; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 18 - 414
Target Start/End: Original strand, 5088139 - 5088550
Alignment:
Q  18 cttatatctaaactaataaactattggtataa-----gataaaataaagccaaattgcttctctataagcagtcttacaagtacttatagaagtagat-- 110  Q
    ||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||      
T  5088139 cttatatctaaactaataaactattggtataactaaagataaaataaagccaaattgcttctctataagtagtcttacaagtatttatagaagtagataa 5088238  T
Q  111 --------aagctgaaataagtcaatccaaacatacccttatgatgttccatggtgtttctatatgattgtatactcagttctatgtgtctaatttaagc 202  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5088239 gctgagataagctgaaataagtcaatccaaacatacccttatgatgttccatggtgtttctatatgattgtatactcagttctatgtgtctaatttaagc 5088338  T
Q  203 tttttgtccagtagctaaattgtgctgtgatttgtttagttggctgcacctttggagacattaggaaaagctgcagctgaactacaaataaagaaacgga 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5088339 tttttgtccagtagctaaattgtgctgtgatttgtttagttggctgcacctttggagacattaggaagagctgcagctgaactacaaataaagaaacgga 5088438  T
Q  303 ctcatataggtaggtatatgcaaatccacaaaaggagcatgtgttctaccgaatacagttttatgtttaagttcacgttgtaaaatgtagctagctagca 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5088439 ctcatataggtaggtatatgcaaatccacaaaaggagcatgtgttctaccgaatacagttttatgtttaagttcacgttgtaaaatgtagctagctagca 5088538  T
Q  403 tgtgatgtgatc 414  Q
    ||||||||||||    
T  5088539 tgtgatgtgatc 5088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 10727451 - 10727500
Alignment:
Q  91 aagtacttatagaagtagataagctgaaataagtcaatccaaacataccc 140  Q
    ||||||||||| |||||||||| || ||||||||||||||||||| ||||    
T  10727451 aagtacttatacaagtagataaactcaaataagtcaatccaaacagaccc 10727500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 12361293 - 12361343
Alignment:
Q  83 agtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaa 133  Q
    ||||| |||||||||||||  |||||||||| | |||||||||||||||||    
T  12361293 agtctaacaagtacttatatcagtagataagttcaaataagtcaatccaaa 12361343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 29249491 - 29249553
Alignment:
Q  82 cagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaacatacccttat 144  Q
    ||||||||||||||||||||  |||| ||||||| |||||||||||||||||||| |||||||    
T  29249491 cagtcttacaagtacttataacagtaaataagctcaaataagtcaatccaaacatgcccttat 29249553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 10452384 - 10452333
Alignment:
Q  91 aagtacttatagaagtagataagctgaaataagtcaatccaaacataccctt 142  Q
    ||||||||||| || |||||||||| ||||||| |||||||||||| |||||    
T  10452384 aagtacttatataaatagataagctcaaataagccaatccaaacatgccctt 10452333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 30536937 - 30536884
Alignment:
Q  82 cagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    |||||| | ||||||||||  |||||||||| || |||||||||||||||||||    
T  30536937 cagtctaataagtacttatgtaagtagataaactcaaataagtcaatccaaaca 30536884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 137
Target Start/End: Complemental strand, 31776222 - 31776189
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacata 137  Q
    |||||||||||| |||||||||||||||||||||    
T  31776222 agtagataagctcaaataagtcaatccaaacata 31776189  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 34882380 - 34882340
Alignment:
Q  95 acttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  34882380 acttatactagtagataagatgaaataagtcaatccaaaca 34882340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 33266435 - 33266397
Alignment:
Q  105 gtagataagctgaaataagtcaatccaaacataccctta 143  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  33266435 gtagataagctcaaataagtcaatccaaacataccctta 33266397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 7087108 - 7087056
Alignment:
Q  89 acaagtacttatagaagtagataagctgaaataagtcaatccaaacataccct 141  Q
    |||||| ||||||  ||||||||| ||||||| ||||||||||||||||||||    
T  7087108 acaagtgcttatactagtagataaactgaaattagtcaatccaaacataccct 7087056  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 389936 - 389987
Alignment:
Q  82 cagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaa 133  Q
    |||||| |||||||||||| |||||||||| ||| ||||||| |||||||||    
T  389936 cagtctcacaagtacttatggaagtagataggctcaaataagccaatccaaa 389987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 3019888 - 3019934
Alignment:
Q  89 acaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    |||||||||||||  |||||||||||| ||||||||||||| |||||    
T  3019888 acaagtacttatactagtagataagctcaaataagtcaatcaaaaca 3019934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 37064427 - 37064379
Alignment:
Q  95 acttatagaagtagataagctgaaataagtcaatccaaacataccctta 143  Q
    |||||||  |||||||||| | ||||||||||||||||||| |||||||    
T  37064427 acttatatcagtagataagatcaaataagtcaatccaaacagaccctta 37064379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 40371601 - 40371565
Alignment:
Q  107 agataagctgaaataagtcaatccaaacataccctta 143  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  40371601 agataagctcaaataagtcaatccaaacatgccctta 40371565  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 26866433 - 26866470
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacataccct 141  Q
    |||||||||||||||||||||||||||||||| |||||    
T  26866433 agtagataagctgaaataagtcaatccaaacagaccct 26866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 21002253 - 21002306
Alignment:
Q  82 cagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    |||||| |||||| |||||  ||||||||||||| ||||||| |||||||||||    
T  21002253 cagtctcacaagttcttatgcaagtagataagctcaaataagccaatccaaaca 21002306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 33723357 - 33723301
Alignment:
Q  79 aagcagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    ||||||||| ||||||  |||| | |||||||||| | |||||||||||||||||||    
T  33723357 aagcagtctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaaca 33723301  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 14331486 - 14331525
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacataccctta 143  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  14331486 agtagataagctcaaataagtcaatccaaacagaccctta 14331525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 14932416 - 14932455
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacataccctta 143  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  14932416 agtagataagctcaaataagtcaatccaaacatactctta 14932455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 9174938 - 9174975
Alignment:
Q  106 tagataagctgaaataagtcaatccaaacataccctta 143  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  9174938 tagataagctcaaataagtcaatccaaacatgccctta 9174975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 1773065 - 1773025
Alignment:
Q  95 acttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    |||||| |||||||||||||| ||||||| |||||||||||    
T  1773065 acttatggaagtagataagctaaaataagccaatccaaaca 1773025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 26004972 - 26004916
Alignment:
Q  79 aagcagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    ||||||| | |||||| |||||   |||||||||||| |||||||||||||||||||    
T  26004972 aagcagtttgacaagtgcttatgctagtagataagctaaaataagtcaatccaaaca 26004916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 32194074 - 32194011
Alignment:
Q  71 ttctctataagcagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    |||||||||| |||||| |||||| ||||||  | ||| |||||| |||||||||||||||||||    
T  32194074 ttctctataa-cagtctcacaagttcttatatcattagttaagctcaaataagtcaatccaaaca 32194011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 42646789 - 42646829
Alignment:
Q  103 aagtagataagctgaaataagtcaatccaaacataccctta 143  Q
    ||||||||||||| || |||||||||||||||| |||||||    
T  42646789 aagtagataagctcaagtaagtcaatccaaacagaccctta 42646829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 27043780 - 27043741
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacataccctta 143  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  27043780 agtagataagctcaaataagtcaatccaaacagaccctta 27043741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 23676973 - 23676933
Alignment:
Q  89 acaagtacttatagaagtagataagctgaaataagtcaatc 129  Q
    ||||||||||||| ||||||||||| | |||||||||||||    
T  23676973 acaagtacttatacaagtagataagttcaaataagtcaatc 23676933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 135
Target Start/End: Original strand, 30331871 - 30331902
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaaca 135  Q
    ||||||||||||||||||||||||||||||||    
T  30331871 agtagataagctgaaataagtcaatccaaaca 30331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 37419632 - 37419585
Alignment:
Q  89 acaagtacttatagaagtagataagctgaaataagtcaatccaaacat 136  Q
    |||||| |||||| |||||||||| || ||||||||||||||||||||    
T  37419632 acaagtgcttatataagtagataaactcaaataagtcaatccaaacat 37419585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 2790337 - 2790389
Alignment:
Q  83 agtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    ||||| |||||||||||||  |||||||||| | ||||||| |||||||||||    
T  2790337 agtctgacaagtacttatactagtagataagttcaaataagccaatccaaaca 2790389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 6772482 - 6772446
Alignment:
Q  105 gtagataagctgaaataagtcaatccaaacataccct 141  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  6772482 gtagataagctcaaataagtcaatccaaacatgccct 6772446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 9996833 - 9996889
Alignment:
Q  79 aagcagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    ||||||||| ||||||||||||   ||| |||||||| ||||||||||| |||||||    
T  9996833 aagcagtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaaca 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 32582848 - 32582897
Alignment:
Q  95 acttatagaagtagataagctgaaataagtcaatccaaacatacccttat 144  Q
    |||||| | ||||||||| || ||||||||||||||||||||||| ||||    
T  32582848 acttatggtagtagataaactcaaataagtcaatccaaacatacctttat 32582897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 46407861 - 46407894
Alignment:
Q  103 aagtagataagctgaaataagtcaatccaaacat 136  Q
    ||||||||||||| ||||||||||||||||||||    
T  46407861 aagtagataagctcaaataagtcaatccaaacat 46407894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 50211833 - 50211886
Alignment:
Q  82 cagtcttacaagtacttatagaagtagataagctgaaataagtcaatccaaaca 135  Q
    ||||||||||||| |||||   |||||||||||| |||||||| ||||||||||    
T  50211833 cagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 50211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 8007617 - 8007585
Alignment:
Q  103 aagtagataagctgaaataagtcaatccaaaca 135  Q
    ||||||||||||| |||||||||||||||||||    
T  8007617 aagtagataagctaaaataagtcaatccaaaca 8007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 26990175 - 26990143
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacat 136  Q
    |||||||||||| ||||||||||||||||||||    
T  26990175 agtagataagctcaaataagtcaatccaaacat 26990143  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 31615509 - 31615473
Alignment:
Q  105 gtagataagctgaaataagtcaatccaaacataccct 141  Q
    |||||||| || |||||||||||||||||||||||||    
T  31615509 gtagataaactcaaataagtcaatccaaacataccct 31615473  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 21248 - 21208
Alignment:
Q  104 agtagataagctgaaataagtcaatccaaacatacccttat 144  Q
    |||||||||||| | ||||||||||||||||||||| ||||    
T  21248 agtagataagctcagataagtcaatccaaacatacctttat 21208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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