View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16584_low_6 (Length: 284)
Name: NF16584_low_6
Description: NF16584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16584_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 274
Target Start/End: Original strand, 40469750 - 40470012
Alignment:
| Q |
20 |
tgtcatcaaatgttgcaacagaaagtaaataacctagtctctgtagttactacattccaaattgtcaccatctataagaggatccaaagcatttagtcat |
119 |
Q |
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| T |
40469750 |
tgtcatcaaatgttgcaacagaaagtaaataacccagtctctgtagttactacattccaaattgtcaccatctataagaggatccaaagcatttagtcat |
40469849 |
T |
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| Q |
120 |
aataactatactgttattgttaactaataaatgaaagtgtagtgtcaatatggtttatctttacttaagagaagtcattgaatctttttcaga------- |
212 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
40469850 |
aataactatactgttattgttaactaataaatgaaaatgtagtgtcaatatggtttatctttacttaagagaagtcgttgaatctttttcagatgtcata |
40469949 |
T |
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| Q |
213 |
-ttgttgtgttcttgagtggcatctcatggttgtgttttccttcatatgtagtcacaaatgat |
274 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
40469950 |
tttgttgtgttcttgagtggcatctcatggttgtgctttccttcatatgtagtcacaaatgat |
40470012 |
T |
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