View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16585_high_20 (Length: 243)
Name: NF16585_high_20
Description: NF16585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16585_high_20 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 42679993 - 42679843
Alignment:
| Q |
37 |
gtgtactgtgagagaagtcgtagcaaggaggcgaaattcttgtccaagaagccggaggcaaggtagttttctgattcaaagatgtttcttggaaagcata |
136 |
Q |
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| T |
42679993 |
gtgtactgtgagagaagtcgtagcaaggaggcgaaattcttgtccaagaagccggaggcaaggtagttttctgattcaaagatgtttcttggaaagcata |
42679894 |
T |
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| Q |
137 |
aattagtaatacggtaaaccaccagtttgtaaggtgaaccatgtcactcac |
187 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
42679893 |
aattagtaatacggtaaaccaccggtttgtaaggtgaaccatgtcactcac |
42679843 |
T |
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