View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16585_high_8 (Length: 367)
Name: NF16585_high_8
Description: NF16585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16585_high_8 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 12 - 367
Target Start/End: Complemental strand, 24755671 - 24755316
Alignment:
| Q |
12 |
attattctcattcaattttgttttgggtctttttggttaatttgggttgatgggtatatgttaatagttcttgctttgtattatttttattgggaatttt |
111 |
Q |
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| T |
24755671 |
attattctcattcaattttgttttgggtctttttggttaatttgggttgatgggtatatgttaatagttcttgctttgtattatttttattgggaatttt |
24755572 |
T |
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| Q |
112 |
ggtttatattgattagattggttttagttgatgatagtttgattgattctatgaaaatgttaggaaatgatgatttgaagtccaaaaatgagaaaggaag |
211 |
Q |
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| T |
24755571 |
ggtttatattgattagattggttttagttgatgatagtttgattgattctatgaaaatgttaggaaatgatgatttgaagtccaaaaatgagaaaggaag |
24755472 |
T |
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| Q |
212 |
tgatggtggagagtataattcacacccatcagctgctcgaccaattgcttctgaagtcatgtctgcgaaggaatcatgtcttgagagtgggaaccctggt |
311 |
Q |
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| T |
24755471 |
tgatggtggagagtataattcacacacatcagctgctcgaccaattgcttctgaagtcatgtctgcgaaggaatcatgtcttgagagtgggaaccctggt |
24755372 |
T |
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| Q |
312 |
ggtatttcaaatggcgagtccctagctgagaagaactcaaaggatgatgagtttgt |
367 |
Q |
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| T |
24755371 |
gttatttcaaatggcgagtccctagctgagaagaactcaaaggatgatgagtttgt |
24755316 |
T |
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