View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16585_low_5 (Length: 570)

Name: NF16585_low_5
Description: NF16585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16585_low_5
NF16585_low_5
[»] chr5 (26 HSPs)
chr5 (19-542)||(6938505-6939008)
chr5 (395-446)||(37611188-37611239)
chr5 (395-446)||(37787918-37787969)
chr5 (401-439)||(5531086-5531124)
chr5 (123-177)||(7097343-7097397)
chr5 (336-377)||(16937800-16937841)
chr5 (393-449)||(8089980-8090036)
chr5 (124-184)||(26516180-26516240)
chr5 (403-466)||(10152388-10152451)
chr5 (393-444)||(14295550-14295601)
chr5 (332-379)||(30585764-30585811)
chr5 (332-379)||(42034168-42034215)
chr5 (123-177)||(6738542-6738596)
chr5 (123-177)||(13244616-13244670)
chr5 (332-378)||(25705575-25705621)
chr5 (121-171)||(41052769-41052819)
chr5 (332-373)||(10771809-10771850)
chr5 (332-377)||(25720334-25720379)
chr5 (332-377)||(26004914-26004959)
chr5 (401-442)||(26516459-26516500)
chr5 (123-184)||(29115341-29115402)
chr5 (396-441)||(29363055-29363100)
chr5 (393-441)||(6109527-6109575)
chr5 (332-376)||(11153364-11153408)
chr5 (332-379)||(17258797-17258845)
chr5 (401-441)||(34690925-34690965)
[»] chr4 (21 HSPs)
chr4 (405-467)||(2996629-2996691)
chr4 (393-448)||(33534140-33534195)
chr4 (331-372)||(30585659-30585700)
chr4 (123-184)||(47771876-47771937)
chr4 (402-446)||(6428071-6428115)
chr4 (336-376)||(35571549-35571589)
chr4 (330-378)||(38478818-38478866)
chr4 (331-379)||(45104311-45104359)
chr4 (336-379)||(18815135-18815178)
chr4 (123-182)||(33640989-33641048)
chr4 (121-175)||(17823017-17823071)
chr4 (336-378)||(54426155-54426197)
chr4 (338-379)||(23319965-23320006)
chr4 (335-379)||(26780-26824)
chr4 (393-465)||(4071922-4071994)
chr4 (123-182)||(4243221-4243281)
chr4 (122-177)||(24193465-24193520)
chr4 (75-103)||(27970043-27970071)
chr4 (123-171)||(39886715-39886763)
chr4 (421-449)||(52428737-52428765)
chr4 (405-465)||(53315382-53315442)
[»] chr3 (21 HSPs)
chr3 (396-446)||(24281094-24281144)
chr3 (332-379)||(19679243-19679290)
chr3 (396-446)||(34707469-34707519)
chr3 (396-465)||(34382989-34383058)
chr3 (401-469)||(1810029-1810097)
chr3 (421-469)||(50211807-50211855)
chr3 (332-379)||(44014713-44014760)
chr3 (396-446)||(37273181-37273231)
chr3 (337-379)||(53762309-53762351)
chr3 (405-446)||(25182960-25183001)
chr3 (332-369)||(27795938-27795975)
chr3 (332-377)||(40240738-40240783)
chr3 (401-446)||(40880921-40880966)
chr3 (393-446)||(42817195-42817248)
chr3 (422-467)||(47584523-47584568)
chr3 (412-464)||(2175804-2175856)
chr3 (426-466)||(2413632-2413672)
chr3 (396-440)||(3015822-3015866)
chr3 (332-376)||(25459548-25459592)
chr3 (336-376)||(39980841-39980881)
chr3 (336-376)||(49605769-49605809)
[»] chr2 (15 HSPs)
chr2 (401-467)||(37474817-37474883)
chr2 (123-172)||(41702326-41702375)
chr2 (332-376)||(30990357-30990401)
chr2 (334-378)||(33503108-33503152)
chr2 (393-441)||(43065428-43065476)
chr2 (332-375)||(11514004-11514047)
chr2 (332-375)||(43259943-43259986)
chr2 (393-436)||(44606093-44606136)
chr2 (396-446)||(16398444-16398494)
chr2 (123-184)||(4550658-4550719)
chr2 (334-379)||(15370238-15370283)
chr2 (121-174)||(42974231-42974284)
chr2 (406-446)||(1494419-1494459)
chr2 (328-376)||(33942010-33942058)
chr2 (124-172)||(39567784-39567832)
[»] chr6 (22 HSPs)
chr6 (389-466)||(1669751-1669828)
chr6 (393-468)||(9027622-9027697)
chr6 (123-177)||(33828527-33828581)
chr6 (380-449)||(10616511-10616580)
chr6 (332-379)||(12111075-12111122)
chr6 (393-440)||(30863290-30863337)
chr6 (150-184)||(2767796-2767830)
chr6 (122-184)||(2785796-2785858)
chr6 (332-378)||(32861650-32861696)
chr6 (393-467)||(2167108-2167184)
chr6 (393-467)||(2178741-2178817)
chr6 (123-184)||(9027458-9027519)
chr6 (405-446)||(31338032-31338073)
chr6 (333-362)||(31338086-31338115)
chr6 (393-446)||(32577959-32578012)
chr6 (393-446)||(34939557-34939610)
chr6 (336-376)||(835179-835219)
chr6 (129-184)||(6654501-6654557)
chr6 (336-376)||(7490251-7490291)
chr6 (117-177)||(14340938-14340998)
chr6 (412-464)||(19752761-19752813)
chr6 (401-441)||(20377898-20377938)
[»] chr1 (14 HSPs)
chr1 (332-372)||(2832080-2832120)
chr1 (401-449)||(6262790-6262838)
chr1 (389-466)||(6659720-6659797)
chr1 (125-177)||(24263274-24263326)
chr1 (332-379)||(32515356-32515403)
chr1 (336-379)||(38247439-38247482)
chr1 (393-467)||(27140522-27140596)
chr1 (123-177)||(48133074-48133128)
chr1 (334-376)||(51957314-51957356)
chr1 (123-172)||(10744188-10744237)
chr1 (401-446)||(38867804-38867849)
chr1 (393-429)||(15064825-15064861)
chr1 (148-176)||(19389808-19389836)
chr1 (393-441)||(38170668-38170716)
[»] chr8 (19 HSPs)
chr8 (332-379)||(9700109-9700156)
chr8 (332-379)||(31884855-31884902)
chr8 (123-177)||(2482742-2482796)
chr8 (395-449)||(30259160-30259214)
chr8 (124-177)||(12833260-12833313)
chr8 (393-446)||(30918157-30918209)
chr8 (335-379)||(31891922-31891966)
chr8 (122-177)||(6950216-6950271)
chr8 (336-375)||(9130238-9130277)
chr8 (332-379)||(16162868-16162915)
chr8 (405-452)||(30987958-30988005)
chr8 (126-172)||(41442576-41442622)
chr8 (336-378)||(43045641-43045683)
chr8 (332-378)||(44236739-44236785)
chr8 (393-442)||(11183589-11183638)
chr8 (393-466)||(28769292-28769365)
chr8 (393-441)||(14949910-14949958)
chr8 (421-449)||(27412852-27412880)
chr8 (334-378)||(38874757-38874801)
[»] chr7 (16 HSPs)
chr7 (393-467)||(33894671-33894745)
chr7 (393-441)||(46082080-46082128)
chr7 (123-166)||(6824815-6824858)
chr7 (123-170)||(34672892-34672939)
chr7 (336-379)||(40252038-40252081)
chr7 (332-362)||(8094414-8094444)
chr7 (125-171)||(32156891-32156937)
chr7 (328-374)||(32791665-32791711)
chr7 (124-173)||(22204392-22204441)
chr7 (124-173)||(22230298-22230347)
chr7 (332-377)||(24363517-24363562)
chr7 (153-185)||(19624137-19624169)
chr7 (330-362)||(22759267-22759299)
chr7 (405-441)||(28340398-28340434)
chr7 (332-376)||(29363616-29363660)
chr7 (121-177)||(46945773-46945829)
[»] scaffold0254 (1 HSPs)
scaffold0254 (393-467)||(3517-3593)
[»] scaffold0147 (1 HSPs)
scaffold0147 (393-441)||(12682-12730)
[»] scaffold0020 (1 HSPs)
scaffold0020 (343-379)||(159888-159924)


Alignment Details
Target: chr5 (Bit Score: 407; Significance: 0; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 19 - 542
Target Start/End: Complemental strand, 6939008 - 6938505
Alignment:
Q  19 ctctctgctgttgcattgccttatgaacaggttccctcccactcttaacttaacactattttcatataagttataacttgttttcgtcaagaagatcttg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6939008 ctctctgctgttgcattgccttatgaacaggttccctcccactcttaacttaacactattttcatataagttataacttgttttcgtcatgaagatcttg 6938909  T
Q  119 aacttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttatacattatgtacaagtcgataaaataaagtcaaat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6938908 aacttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttatacattatgtacaagtcgataaaataaagtcaaat 6938809  T
Q  219 tggtttcaatataaatagactattagttttttagtaagctgttctcaagagtttaatgatataagctgaaaataactataagttgtttccataagcaccc 318  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6938808 ttgtttcaatataaatagactattagttttttagtaagctgttctcaagagtttaatgatataagctgaaaataattataagttgtttccataagcaccc 6938709  T
Q  319 ccacaattgcactagtgcttatgctagtagataagctcaaataacctaatccaaacaggccgcttatatcaatgagctgaagacaacttatggacatatc 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  6938708 ccacaattgcactagtgcttatgctagtagataagctcaaataacctaatccaaacaggccgcttatatcaatgagctgaagacaacttatgg------- 6938616  T
Q  419 acaagttgttttcataagctctctcaaatagacttaaaagtgcttatgttattgttagaacaacaaccgatatacaagtataagnnnnnnnnnnnnttga 518  Q
                 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||    
T  6938615 -------------ataagctttctcaaatagacttaaaagtgcttatgttattgttagaacaacaaccgatatacaagtataagaaaaaacaaaaattga 6938529  T
Q  519 aagacaatgagacacagttttgtt 542  Q
    ||||||||||||||||||||||||    
T  6938528 aagacaatgagacacagttttgtt 6938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 37611239 - 37611188
Alignment:
Q  395 ctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||| ||| |||||| |||| ||||||||||||||||||||||||||||||    
T  37611239 ctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 37787969 - 37787918
Alignment:
Q  395 ctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||| ||| |||||| |||| ||||||||||||||||||||||||||||||    
T  37787969 ctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaa 37787918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 439
Target Start/End: Original strand, 5531086 - 5531124
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctc 439  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5531086 acaacttatggacatatcataagttgttttcataagctc 5531124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 7097343 - 7097397
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    ||||||| ||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  7097343 tgtttggctaaacagcttaattatatgcttatagcataaatgcttatcatataag 7097397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 16937841 - 16937800
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacagg 377  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  16937841 cttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 8089980 - 8090036
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatag 449  Q
    ||||||| ||| |||| | | |||||| |||||||||||||||||||||||||||||    
T  8089980 agctgaaaacagcttaggaatatatcataagttgttttcataagctctctcaaatag 8090036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 26516180 - 26516240
Alignment:
Q  124 gtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 184  Q
    |||||||||||||  |||||||   ||||||||||||| ||||||||||||||| ||||||    
T  26516180 gtttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttat 26516240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 10152388 - 10152451
Alignment:
Q  403 aacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 466  Q
    ||||||||||||| ||| |||||||||||||||||||||  |||||| || | | |||||||||    
T  10152388 aacttatggacatgtcataagttgttttcataagctctccaaaatagtctcacatgtgcttatg 10152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 14295550 - 14295601
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctca 444  Q
    ||||||| ||| ||||| ||||||||| ||| ||||||||||||||||||||    
T  14295550 agctgaaaacagcttatcgacatatcataagctgttttcataagctctctca 14295601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 30585764 - 30585811
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||| |||||||||||| ||||||||| ||||||| ||||||    
T  30585764 agtgcttatgttagtagataagcacaaataaccaaatccaatcaggcc 30585811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 42034168 - 42034215
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  42034168 agtgcttatgtcagtaggtaagctcaaataagctaatccaaacaggcc 42034215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 6738596 - 6738542
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    |||||| |||||| |||||||||  || ||||||||||||| |||||||||||||    
T  6738596 tgtttgcataaaccgtttaattaagagtttatagcataaacacttatcatataag 6738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 13244670 - 13244616
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    ||||||||||||||||| ||||    | |||||||||||||||||||||||||||    
T  13244670 tgtttggataaacagttaaattgagcgtttatagcataaacgcttatcatataag 13244616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 378
Target Start/End: Complemental strand, 25705621 - 25705575
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    |||||||||| ||||||||||| ||||||||  ||||||||||||||    
T  25705621 agtgcttatgttagtagataagttcaaataatttaatccaaacaggc 25705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 41052769 - 41052819
Alignment:
Q  121 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatca 171  Q
    |||||||||||||||| ||||||||   |||| ||||||||||||||||||    
T  41052769 cttgtttggataaacaatttaattaagtgcttgtagcataaacgcttatca 41052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 373
Target Start/End: Complemental strand, 10771850 - 10771809
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaa 373  Q
    ||||||||||| ||||||||||||||||||| | ||||||||    
T  10771850 agtgcttatgccagtagataagctcaaataagccaatccaaa 10771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 25720379 - 25720334
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 377  Q
    ||||||||||| ||||||||| ||||||||| ||||| ||||||||    
T  25720379 agtgcttatgccagtagataacctcaaataagctaattcaaacagg 25720334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 26004959 - 26004914
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 377  Q
    |||||||||||||||||||||||| ||||||   ||||||||||||    
T  26004959 agtgcttatgctagtagataagctaaaataagtcaatccaaacagg 26004914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 26516459 - 26516500
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctct 442  Q
    |||||| |||||||||||| ||| ||||||||||||||||||    
T  26516459 acaactaatggacatatcataagctgttttcataagctctct 26516500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 29115402 - 29115341
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 184  Q
    |||||||||||||| ||||||||   |||||||||||||||  |||||||| ||| ||||||    
T  29115402 tgtttggataaacactttaattacgcgcttatagcataaacatttatcataaaagtgcttat 29115341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 441
Target Start/End: Original strand, 29363055 - 29363100
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    |||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  29363055 tgaaaacaacttatgggcatgtcataagttgttttcataagctctc 29363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 6109527 - 6109575
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||| ||||||||||||||||||| || || ||| |||||||||||    
T  6109527 agctgaaaacaacttatggacatatcataatttttttccataagctctc 6109575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 11153408 - 11153364
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||| ||||||||||||||||||||||| || | |||||||||||    
T  11153408 agtgtttatgctagtagataagctcaaacaagccaatccaaacag 11153364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 17258845 - 17258797
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataa-cctaatccaaacaggcc 379  Q
    |||||||||| |||| ||||||||||||||| || ||||||||||||||    
T  17258845 agtgcttatgttagttgataagctcaaataagccaaatccaaacaggcc 17258797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 34690925 - 34690965
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||||||||||| |||||| ||||||| ||||||||||    
T  34690925 acaacttatggacatgtcacaatttgtttttataagctctc 34690965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 2996629 - 2996691
Alignment:
Q  405 cttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    ||||||||||| ||| |||||||||||||||||||||||||| || || ||||||||||||||    
T  2996629 cttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgt 2996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 33534195 - 33534140
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaata 448  Q
    ||||||| |||||||||||| || |||||| |||||||||||||||||||||||||    
T  33534195 agctgaaaacaacttatggatatgtcacaatttgttttcataagctctctcaaata 33534140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 30585659 - 30585700
Alignment:
Q  331 tagtgcttatgctagtagataagctcaaataacctaatccaa 372  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  30585659 tagtgcttatgcaagtagataagctcaaataaactaatccaa 30585700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 47771876 - 47771937
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 184  Q
    ||||||||||||||| ||| ||   |||||||||||||| ||||||||||||||| ||||||    
T  47771876 tgtttggataaacagcttattttggagcttatagcataagcgcttatcatataagcgcttat 47771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 6428071 - 6428115
Alignment:
Q  402 caacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||    
T  6428071 caacttatggacatgtcataagttgttttcataatctctctcaaa 6428115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 35571589 - 35571549
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  35571589 cttatgctagtagataagctcaaataagccaatccaaacag 35571549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 38478818 - 38478866
Alignment:
Q  330 ctagtgcttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    ||||||||||||| |||||||| |||||||||| | |||||||||||||    
T  38478818 ctagtgcttatgccagtagatatgctcaaataagccaatccaaacaggc 38478866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 45104359 - 45104311
Alignment:
Q  331 tagtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  45104359 tagtgcttatgccaatagatatgctcaaataagctaatccaaacaggcc 45104311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 18815135 - 18815178
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||    
T  18815135 cttatgctagtaggtaagctcaaataagccaatccaaacaggcc 18815178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 33640989 - 33641048
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggctt 182  Q
    ||||||||||||||| |||||||   |||||||| |||| ||||||||||||||| ||||    
T  33640989 tgtttggataaacagcttaattaagtgcttatagaataatcgcttatcatataagtgctt 33641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 17823017 - 17823071
Alignment:
Q  121 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatata 175  Q
    ||||||||||||||||| ||||||  ||||| |||||||||  ||||||||||||    
T  17823017 cttgtttggataaacagcttaatttgcagctcatagcataagggcttatcatata 17823071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 54426155 - 54426197
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    ||||||| ||||||||||||||||||| | |||||||||||||    
T  54426155 cttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 379
Target Start/End: Original strand, 23319965 - 23320006
Alignment:
Q  338 tatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||||||||| ||||||||| | ||||||||||||||    
T  23319965 tatgctagtagataatctcaaataagccaatccaaacaggcc 23320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 26824 - 26780
Alignment:
Q  335 gcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||| ||| ||||||||||||||| | ||||||||||||||    
T  26824 gcttatgccagttgataagctcaaataagccaatccaaacaggcc 26780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 4071922 - 4071994
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttat 465  Q
    ||||||| ||||||||   ||| |||| ||| |||||||||||||||||||||| || || | ||||||||||    
T  4071922 agctgaaaacaacttaccaacaaatcataagctgttttcataagctctctcaaacagtctcacaagtgcttat 4071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 4243221 - 4243281
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttat-agcataaacgcttatcatataagggctt 182  Q
    ||||||||||||||| |||||||   |||||| ||||||| ||||||||||||||| ||||    
T  4243221 tgtttggataaacagcttaattaagtgcttattagcataagcgcttatcatataagtgctt 4243281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 24193465 - 24193520
Alignment:
Q  122 ttgtttggataaacagtttaatt-atcagcttatagcataaacgcttatcatataag 177  Q
    |||||||||||||||  |||||| | || ||||||||||||||||||||||||||||    
T  24193465 ttgtttggataaacaacttaattgagca-cttatagcataaacgcttatcatataag 24193520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 27970043 - 27970071
Alignment:
Q  75 tattttcatataagttataacttgttttc 103  Q
    |||||||||||||||||||||||||||||    
T  27970043 tattttcatataagttataacttgttttc 27970071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 39886763 - 39886715
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatca 171  Q
    ||||||||||||||  ||| ||  |||||||||||||||||||||||||    
T  39886763 tgtttggataaacaaattattttgcagcttatagcataaacgcttatca 39886715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 449
Target Start/End: Original strand, 52428737 - 52428765
Alignment:
Q  421 aagttgttttcataagctctctcaaatag 449  Q
    |||||||||||||||||||||||||||||    
T  52428737 aagttgttttcataagctctctcaaatag 52428765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 53315382 - 53315442
Alignment:
Q  405 cttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttat 465  Q
    ||||||||||| | | | ||||||||||||||||||| ||||||| |||| | ||||||||    
T  53315382 cttatggacatgtgatatgttgttttcataagctctcacaaatagtcttatatgtgcttat 53315442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 24281094 - 24281144
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  24281094 tgaaaacaacttatggagatatcataagttgttttcataagctctctcaaa 24281144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 19679290 - 19679243
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  19679290 agtgcttatgctagtagataaactcaaataacccaatccaaataggcc 19679243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 34707519 - 34707469
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||| ||||||||||||||| |||||||||||||||| ||| |||||||||    
T  34707519 tgaaaacaacttatggacatgtcacaagttgttttcaaaagttctctcaaa 34707469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 465
Target Start/End: Original strand, 34382989 - 34383058
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttat 465  Q
    |||| ||||||||| ||||||||| ||  ||||| |||||||| ||||||| ||||||||||||| ||||    
T  34382989 tgaaaacaacttatagacatatcataatctgtttccataagctatctcaaacagacttaaaagtgtttat 34383058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 469
Target Start/End: Original strand, 1810029 - 1810097
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgtta 469  Q
    |||||| |||||||| ||| ||||||||| | ||||||||||||||||| || | ||||| ||||||||    
T  1810029 acaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattatgtta 1810097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 50211807 - 50211855
Alignment:
Q  421 aagttgttttcataagctctctcaaatagacttaaaagtgcttatgtta 469  Q
    |||||||||||||||| ||||||||| || |||| ||||||||||||||    
T  50211807 aagttgttttcataagttctctcaaacagtcttacaagtgcttatgtta 50211855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 44014760 - 44014713
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  44014760 agtgtttatgctagtagataaactcaaataagccaatccaaacaggcc 44014713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 37273181 - 37273231
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||| ||||||||||||||| ||| ||||||||| ||||||||||| ||||    
T  37273181 tgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaa 37273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 379
Target Start/End: Complemental strand, 53762351 - 53762309
Alignment:
Q  337 ttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||||||||||||||||||| | ||||||| ||||||    
T  53762351 ttatgctagtagataagctcaaataaaccaatccaagcaggcc 53762309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 25183001 - 25182960
Alignment:
Q  405 cttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||||||| || ||| ||||||||||||||||||||||||||    
T  25183001 cttatggatatgtcataagttgttttcataagctctctcaaa 25182960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Complemental strand, 27795975 - 27795938
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatc 369  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  27795975 agtgcttatgccagtagataagctcaaataagctaatc 27795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 40240783 - 40240738
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 377  Q
    |||| ||||||||||| ||||||||||||||  |||||||||||||    
T  40240783 agtgtttatgctagtatataagctcaaataagttaatccaaacagg 40240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 40880966 - 40880921
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||||||| || ||| ||| ||||||||||||||||||||||||||    
T  40880966 acaacttacggtcatgtcataagttgttttcataagctctctcaaa 40880921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 42817248 - 42817195
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||||| ||||||||||||||| ||| | | ||||| ||||||||||||||||    
T  42817248 agctgaaaacaacttatggacatgtcatatgctgtttccataagctctctcaaa 42817195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 467
Target Start/End: Original strand, 47584523 - 47584568
Alignment:
Q  422 agttgttttcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    |||| ||||||||||||||||||||||| || | ||||||||||||    
T  47584523 agttcttttcataagctctctcaaatagtctcacaagtgcttatgt 47584568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 2175856 - 2175804
Alignment:
Q  412 acatatcacaagttgttttcataagctctctcaaatagacttaaaagtgctta 464  Q
    |||| ||| ||||||||||||||| || |||||||||| |||| |||||||||    
T  2175856 acatgtcataagttgttttcataaactatctcaaatagtcttacaagtgctta 2175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 2413672 - 2413632
Alignment:
Q  426 gttttcataagctctctcaaatagacttaaaagtgcttatg 466  Q
    ||||||||||||||||||||| ||||||| ||||| |||||    
T  2413672 gttttcataagctctctcaaacagacttacaagtgattatg 2413632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 3015866 - 3015822
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctct 440  Q
    |||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  3015866 tgaaaacatcttatggacatgtcataagttgttttcataagctct 3015822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 25459592 - 25459548
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    ||||||||||||||| |||||||||||||||   |||||||||||    
T  25459592 agtgcttatgctagttgataagctcaaataaatcaatccaaacag 25459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 39980841 - 39980881
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||||||||||||||||||||||| || | |||||||||||    
T  39980841 cttatgctagtagataagctcaaacaagccaatccaaacag 39980881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 49605809 - 49605769
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||||||||| |||||| ||||||||| |||||||||||||    
T  49605809 cttatgctagaagataaactcaaataaactaatccaaacag 49605769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 401 - 467
Target Start/End: Original strand, 37474817 - 37474883
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| || || | ||||| ||||||    
T  37474817 acaactaatggacatatcacaagtagttttcataagctctctcaaagagtctcataagtgtttatgt 37474883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 41702375 - 41702326
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcat 172  Q
    ||||||||||||||| |||||| ||||||||||||| |||| ||||||||    
T  41702375 tgtttggataaacagcttaattttcagcttatagcaaaaacacttatcat 41702326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 30990401 - 30990357
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||||||||| |||||||||||||||||||| | |||||||||||    
T  30990401 agtgcttatgttagtagataagctcaaataagccaatccaaacag 30990357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 33503108 - 33503152
Alignment:
Q  334 tgcttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||    
T  33503108 tgcttatgctagtagataagctcaaataagccaatacaaacaggc 33503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 43065476 - 43065428
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||| |||| |||||||||| ||| |||||||||||||||||||||    
T  43065476 agctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 375
Target Start/End: Original strand, 11514004 - 11514047
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaaca 375  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||    
T  11514004 agtgcttatgctagtagataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 375
Target Start/End: Original strand, 43259943 - 43259986
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaaca 375  Q
    |||||||||||||||||||||| |||||||| | ||||||||||    
T  43259943 agtgcttatgctagtagataagttcaaataagccaatccaaaca 43259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 44606136 - 44606093
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataag 436  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  44606136 agctgaaaacaacttatggacatgtcataagttgttttcataag 44606093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 446
Target Start/End: Complemental strand, 16398494 - 16398444
Alignment:
Q  396 tgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||||||| ||||||||||| ||| |||||||||||||| | |||||||||    
T  16398494 tgaagacagcttatggacatgtcataagttgttttcatatgttctctcaaa 16398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 4550658 - 4550719
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 184  Q
    ||||||||||||||  ||||||| || |||||||||||| | ||||||| ||||| ||||||    
T  4550658 tgtttggataaacaacttaattaacaacttatagcataatctcttatcacataagtgcttat 4550719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 15370283 - 15370238
Alignment:
Q  334 tgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||| |||||||||||||||||||   ||||||||||||||    
T  15370283 tgcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 42974231 - 42974284
Alignment:
Q  121 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatat 174  Q
    ||||||||||||| ||  |||||||  |||||||||||||||| ||||||||||    
T  42974231 cttgtttggataagcaacttaattaagagcttatagcataaacacttatcatat 42974284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 1494459 - 1494419
Alignment:
Q  406 ttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  1494459 ttatggacatgtcataagctgttttcataagctctctcaaa 1494419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 33942010 - 33942058
Alignment:
Q  328 cactagtgcttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    ||||||| ||||||| ||||||||| ||||||||| | |||||||||||    
T  33942010 cactagtacttatgccagtagataacctcaaataagccaatccaaacag 33942058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 39567784 - 39567832
Alignment:
Q  124 gtttggataaacagtttaattatcagcttatagcataaacgcttatcat 172  Q
    |||||||||||||| ||||||  |||||||| |||||| ||||||||||    
T  39567784 gtttggataaacagcttaattcacagcttattgcataagcgcttatcat 39567832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 1669828 - 1669751
Alignment:
Q  389 aatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 466  Q
    ||||||||||| ||| ||||| ||||| ||| ||||||||||||||||||||| ||| ||| |||| |||||| ||||    
T  1669828 aatgagctgaaaacagcttatagacatgtcataagttgttttcataagctctcccaattagtcttacaagtgcatatg 1669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 468
Target Start/End: Original strand, 9027622 - 9027697
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgtt 468  Q
    ||||||| ||||||||||||||| ||| ||||| ||| |||||||||| ||||| ||||||  | |||||||||||    
T  9027622 agctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacagacttgcacgtgcttatgtt 9027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 33828527 - 33828581
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    |||||||||||||||||||| ||   |||||||||||||||||||||||| ||||    
T  33828527 tgtttggataaacagtttaactaagtgcttatagcataaacgcttatcatttaag 33828581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 10616580 - 10616511
Alignment:
Q  380 gcttatatcaatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatag 449  Q
    |||||||  ||| ||||||| |||||||| |||||| ||| ||||||||| ||||||||||| |||||||    
T  10616580 gcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaatag 10616511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 12111075 - 12111122
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||||||||||||||||||||||||   |||||||| |||||    
T  12111075 agtgcttatgctagtagataagctcaaataagtcaatccaaataggcc 12111122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 440
Target Start/End: Original strand, 30863290 - 30863337
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctct 440  Q
    ||||||| |||||||||| |||| ||| ||||||||||||||||||||    
T  30863290 agctgaaaacaacttatgtacatgtcataagttgttttcataagctct 30863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 2767830 - 2767796
Alignment:
Q  150 cttatagcataaacgcttatcatataagggcttat 184  Q
    |||||||||||||||||| ||||||||||||||||    
T  2767830 cttatagcataaacgcttctcatataagggcttat 2767796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 2785858 - 2785796
Alignment:
Q  122 ttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 184  Q
    |||||||||||||||  |||||||   ||||||||||||||||||| ||||||| | ||||||    
T  2785858 ttgtttggataaacaacttaattaatcgcttatagcataaacgcttgtcatatatgtgcttat 2785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 378
Target Start/End: Original strand, 32861650 - 32861696
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    ||||||||| ||||||||||||||||||||| | |||||||| ||||    
T  32861650 agtgcttattctagtagataagctcaaataagcaaatccaaaaaggc 32861696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 2167184 - 2167108
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttt--tcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    ||||||| ||||||||||||||||||| ||| || ||   |||||||||||||||| || |||| ||| ||||||||    
T  2167184 agctgaaaacaacttatggacatatcataaggtgcttccacataagctctctcaaacagtcttacaagggcttatgt 2167108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 2178817 - 2178741
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttt--tcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    ||||||| ||||||||||||||||||| ||| || ||   |||||||||||||||| || |||| ||| ||||||||    
T  2178817 agctgaaaacaacttatggacatatcataaggtgcttccacataagctctctcaaacagtcttacaagggcttatgt 2178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 9027458 - 9027519
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataagggcttat 184  Q
    |||||||||||||||||||| ||   ||||||||||| ||| ||||| ||||||| ||||||    
T  9027458 tgtttggataaacagtttaagtaagcgcttatagcatgaacacttattatataagtgcttat 9027519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 446
Target Start/End: Original strand, 31338032 - 31338073
Alignment:
Q  405 cttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||    
T  31338032 cttatggacatgtcataagttgttttcataagctctcacaaa 31338073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 31338086 - 31338115
Alignment:
Q  333 gtgcttatgctagtagataagctcaaataa 362  Q
    ||||||||||||||||||||||||||||||    
T  31338086 gtgcttatgctagtagataagctcaaataa 31338115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 32578012 - 32577959
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||||| ||| || | |||||| ||| ||||||||||||||||||||||||||    
T  32578012 agctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaa 32577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 34939557 - 34939610
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||||| |||||||| |||| | ||| ||||||||| ||||||||||||||||    
T  34939557 agctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaa 34939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 835219 - 835179
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  835219 cttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 6654501 - 6654557
Alignment:
Q  129 gataaacagtttaattatcagcttatagcataaacgcttatc-atataagggcttat 184  Q
    ||||| ||| ||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  6654501 gataaccagcttaatttgcagcttatagcattaacgcttatcaatataagggcttat 6654557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 7490291 - 7490251
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||| |||||||||||||||||||||| |||||| ||||||    
T  7490291 cttaagctagtagataagctcaaataaactaatcaaaacag 7490251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 14340998 - 14340938
Alignment:
Q  117 tgaacttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    ||||| ||||||||||||||  |||||||   ||||||| ||||||| |||||||||||||    
T  14340998 tgaacatgtttggataaacaacttaattaagtgcttataacataaacacttatcatataag 14340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 19752813 - 19752761
Alignment:
Q  412 acatatcacaagttgttttcataagctctctcaaatagacttaaaagtgctta 464  Q
    |||||||| | |||||||| |||||||||||||||||| || | |||||||||    
T  19752813 acatatcatacgttgtttttataagctctctcaaatagtctcacaagtgctta 19752761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 20377938 - 20377898
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  20377938 acaacttatagacatgtcataagttgttttcataagctctc 20377898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 2832080 - 2832120
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaa 372  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  2832080 agtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 6262790 - 6262838
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctctcaaatag 449  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  6262790 acaacttatggacatatcataagttattttcataagctctcccaaatag 6262838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 6659720 - 6659797
Alignment:
Q  389 aatgagctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 466  Q
    ||||||||||| |||||||||||||||  || | |||||| ||||||||| || ||||||| || | |||||||||||    
T  6659720 aatgagctgaaaacaacttatggacatgccaaatgttgttatcataagctatcccaaatagtctcacaagtgcttatg 6659797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 24263326 - 24263274
Alignment:
Q  125 tttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    |||||||||||||||||||||   |||||||||||||||| ||| ||||||||    
T  24263326 tttggataaacagtttaattaagtgcttatagcataaacgtttagcatataag 24263274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 32515403 - 32515356
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||| |||||||||| ||||||||  ||||||||||||||||    
T  32515403 agtgcttatgttagtagataaactcaaatatgctaatccaaacaggcc 32515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 38247439 - 38247482
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||    
T  38247439 cttatgccagtagataagttcaaataacccaatccaaacaggcc 38247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 27140522 - 27140596
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    ||||||| ||||||||||||||| ||| ||| ||||| | ||| |||||||||| ||||||| || || ||||||    
T  27140522 agctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaagagacttacaattgtttatgt 27140596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 48133128 - 48133074
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    |||||||||| |||  |||||||   |||||||||||||||||||||||||||||    
T  48133128 tgtttggatagacaacttaattaagcgcttatagcataaacgcttatcatataag 48133074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 51957356 - 51957314
Alignment:
Q  334 tgcttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||||||||||||||||||| |||||||| ||||| |||||||    
T  51957356 tgcttatgctagtagataagttcaaataagctaatacaaacag 51957314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 10744188 - 10744237
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcat 172  Q
    |||||| |||||||  |||||| |||||||||||||||| ||||||||||    
T  10744188 tgtttgtataaacaacttaattctcagcttatagcataagcgcttatcat 10744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 38867849 - 38867804
Alignment:
Q  401 acaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    |||||| |||||||||||| ||||| ||| ||||||||||||||||    
T  38867849 acaactgatggacatatcataagttatttccataagctctctcaaa 38867804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 15064861 - 15064825
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttt 429  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  15064861 agctgaaaacaacttatggacatatcataagttgttt 15064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 19389808 - 19389836
Alignment:
Q  148 agcttatagcataaacgcttatcatataa 176  Q
    |||||||||||||||||||||||||||||    
T  19389808 agcttatagcataaacgcttatcatataa 19389836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 38170716 - 38170668
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||| |||||||||| |||| ||| ||| |||||||||||||||||    
T  38170716 agctgaaaacaacttatgaacatgtcataagctgttttcataagctctc 38170668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 9700109 - 9700156
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  9700109 agtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 9700156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 31884902 - 31884855
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  31884902 agtgcttatgctagtagataagctcaaataacgcaatccaagcaggcc 31884855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 2482742 - 2482796
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    ||||||||||||||| ||||||   |||||||||||||||| |||||||||||||    
T  2482742 tgtttggataaacagcttaatttgaagcttatagcataaacacttatcatataag 2482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 449
Target Start/End: Original strand, 30259160 - 30259214
Alignment:
Q  395 ctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatag 449  Q
    ||||| ||||||||| ||||||||| ||| ||||| |||||||||||||||||||    
T  30259160 ctgaaaacaacttatagacatatcataagctgtttccataagctctctcaaatag 30259214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 12833260 - 12833313
Alignment:
Q  124 gtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    |||| ||||||||||||||||  |||||||||||||||  ||||||||||||||    
T  12833260 gttttgataaacagtttaattcacagcttatagcataagggcttatcatataag 12833313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 30918157 - 30918209
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaa 446  Q
    ||||||| |||||||||| | || ||||||||||||||||||||||||||||||    
T  30918157 agctgaaaacaacttatgaa-atgtcacaagttgttttcataagctctctcaaa 30918209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 31891922 - 31891966
Alignment:
Q  335 gcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||||||||||| |||||||||  |||||||||||||||    
T  31891922 gcttatgctagtagataaactcaaataaattaatccaaacaggcc 31891966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 6950216 - 6950271
Alignment:
Q  122 ttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    |||||| ||||||||  |||||||   |||||||||||||||||||||||||||||    
T  6950216 ttgtttagataaacaacttaattaagtgcttatagcataaacgcttatcatataag 6950271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 9130277 - 9130238
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaaca 375  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  9130277 cttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 16162868 - 16162915
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  16162868 agtgtttatgctagtagataaactcaaataagccaatccaaacaggcc 16162915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 30988005 - 30987958
Alignment:
Q  405 cttatggacatatcacaagttgttttcataagctctctcaaatagact 452  Q
    ||||||||||| ||| ||||||||| |||||||||||||||| |||||    
T  30988005 cttatggacatgtcataagttgtttccataagctctctcaaacagact 30987958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 41442622 - 41442576
Alignment:
Q  126 ttggataaacagtttaattatcagcttatagcataaacgcttatcat 172  Q
    |||||||||||| |||||| | |||||||||||||||| ||||||||    
T  41442622 ttggataaacagcttaatttttagcttatagcataaacacttatcat 41442576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 43045683 - 43045641
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    |||||||||||||||||||| |||||| | |||||||||||||    
T  43045683 cttatgctagtagataagcttaaataagccaatccaaacaggc 43045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 378
Target Start/End: Complemental strand, 44236785 - 44236739
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    ||||||||||| ||||||||| |||||||||  ||||||||||||||    
T  44236785 agtgcttatgccagtagataaactcaaataaggtaatccaaacaggc 44236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 11183589 - 11183638
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctct 442  Q
    ||||||| ||| ||||| ||||||||| |||||||||| |||||||||||    
T  11183589 agctgaaaacagcttatagacatatcataagttgtttttataagctctct 11183638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 28769365 - 28769292
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatg 466  Q
    ||||||| ||||||||||||||||||| | | | ||| || |||||||||||||||  || | |||||||||||    
T  28769365 agctgaaaacaacttatggacatatcatatgctatttacacaagctctctcaaataatctcacaagtgcttatg 28769292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 14949910 - 14949958
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||| ||| ||||||||||| ||| ||||| |||||||||||||||    
T  14949910 agctgaaaacagcttatggacatgtcataagttattttcataagctctc 14949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 449
Target Start/End: Complemental strand, 27412880 - 27412852
Alignment:
Q  421 aagttgttttcataagctctctcaaatag 449  Q
    |||||||||||||||||||||||||||||    
T  27412880 aagttgttttcataagctctctcaaatag 27412852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 38874757 - 38874801
Alignment:
Q  334 tgcttatgctagtagataagctcaaataacctaatccaaacaggc 378  Q
    ||||||||||| |||||||||||||||||   |||||||||||||    
T  38874757 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 38874801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 33894671 - 33894745
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    ||||||| ||||||||||||||| ||| | | ||||||||||||||||| |||| || || | ||||||||||||    
T  33894671 agctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgt 33894745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 46082080 - 46082128
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  46082080 agctgaaaacaacttatggtcatgtcataagttgttttcataagctctc 46082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 6824815 - 6824858
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgct 166  Q
    ||||||||||||||||||||||  || |||||||||||||||||    
T  6824815 tgtttggataaacagtttaatttgcaccttatagcataaacgct 6824858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 34672939 - 34672892
Alignment:
Q  123 tgtttggataaacagtttaattatcagcttatagcataaacgcttatc 170  Q
    ||||||||||||||| |||||| |||||||||||||||| | ||||||    
T  34672939 tgtttggataaacagcttaattttcagcttatagcataagcacttatc 34672892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 379
Target Start/End: Complemental strand, 40252081 - 40252038
Alignment:
Q  336 cttatgctagtagataagctcaaataacctaatccaaacaggcc 379  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||    
T  40252081 cttatgctagtagataagctcaaataagccaattcaaacaggcc 40252038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 8094414 - 8094444
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataa 362  Q
    |||||||||||||||||||||||||||||||    
T  8094414 agtgcttatgctagtagataagctcaaataa 8094444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 32156891 - 32156937
Alignment:
Q  125 tttggataaacagtttaattatcagcttatagcataaacgcttatca 171  Q
    ||||||||||||  ||||||  |||||||||||||||||||||||||    
T  32156891 tttggataaacaacttaatttgcagcttatagcataaacgcttatca 32156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 32791711 - 32791665
Alignment:
Q  328 cactagtgcttatgctagtagataagctcaaataacctaatccaaac 374  Q
    |||||||||||||||||||||||||||||  |||| | |||||||||    
T  32791711 cactagtgcttatgctagtagataagctctgataagccaatccaaac 32791665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 22204392 - 22204441
Alignment:
Q  124 gtttggataaacagtttaattatcagcttatagcataaacgcttatcata 173  Q
    ||||||||||||  |||||||||  |||||||||||||| ||||||||||    
T  22204392 gtttggataaactatttaattatatgcttatagcataaatgcttatcata 22204441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 22230347 - 22230298
Alignment:
Q  124 gtttggataaacagtttaattatcagcttatagcataaacgcttatcata 173  Q
    ||||||||||||  |||||||||  |||||||||||||| ||||||||||    
T  22230347 gtttggataaactatttaattatatgcttatagcataaatgcttatcata 22230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 24363562 - 24363517
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacagg 377  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||    
T  24363562 agtgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 19624137 - 19624169
Alignment:
Q  153 atagcataaacgcttatcatataagggcttata 185  Q
    ||||||||||| |||||||||||||||||||||    
T  19624137 atagcataaacacttatcatataagggcttata 19624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 22759267 - 22759299
Alignment:
Q  330 ctagtgcttatgctagtagataagctcaaataa 362  Q
    ||||||||||||| |||||||||||||||||||    
T  22759267 ctagtgcttatgccagtagataagctcaaataa 22759299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 441
Target Start/End: Complemental strand, 28340434 - 28340398
Alignment:
Q  405 cttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  28340434 cttatggacatgtcataagttgttttcataagctctc 28340398  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 29363616 - 29363660
Alignment:
Q  332 agtgcttatgctagtagataagctcaaataacctaatccaaacag 376  Q
    |||||||||| ||||||||||| |||||||| | |||||||||||    
T  29363616 agtgcttatgttagtagataagttcaaataagccaatccaaacag 29363660  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 46945773 - 46945829
Alignment:
Q  121 cttgtttggataaacagtttaattatcagcttatagcataaacgcttatcatataag 177  Q
    ||||||||||||||||  ||| ||  ||||||||||| ||| |||||||||||||||    
T  46945773 cttgtttggataaacaacttagtttgcagcttatagcttaagcgcttatcatataag 46945829  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 3517 - 3593
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttt--tcataagctctctcaaatagacttaaaagtgcttatgt 467  Q
    ||||||| ||||||||||||||||||| ||| || ||   |||||||||||||||| || |||| ||| ||||||||    
T  3517 agctgaaaacaacttatggacatatcataaggtgcttccacataagctctctcaaacagtcttacaagggcttatgt 3593  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 12730 - 12682
Alignment:
Q  393 agctgaagacaacttatggacatatcacaagttgttttcataagctctc 441  Q
    ||||||| ||||||||||||||| ||| ||||||||| |||||| ||||    
T  12730 agctgaaaacaacttatggacatgtcataagttgtttccataaggtctc 12682  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 379
Target Start/End: Complemental strand, 159924 - 159888
Alignment:
Q  343 tagtagataagctcaaataacctaatccaaacaggcc 379  Q
    |||||||||||||||||||| | ||||||||||||||    
T  159924 tagtagataagctcaaataagccaatccaaacaggcc 159888  T

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