View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16588_low_35 (Length: 260)
Name: NF16588_low_35
Description: NF16588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16588_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 43 - 235
Target Start/End: Complemental strand, 55067741 - 55067549
Alignment:
| Q |
43 |
tttatgttatttatacgctaaaattaggttggagtatcccttgcactctgtttctaacataatcatacaggttaaaaaattcaacaaagaaaaagattgt |
142 |
Q |
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| T |
55067741 |
tttatgttatttatacgctaaaattaggttggagtatcccttgcactctgtttctaacataatcatacaggttaaaaaattgaacaaagaaaaagattgt |
55067642 |
T |
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| Q |
143 |
ttgtttataaatttataagaaacagacatattgaaatggaaaatagagaataccataacaaaaattgcatcttatttctttattcatctcttg |
235 |
Q |
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| T |
55067641 |
ttgtttataaatttataagaaacagacatatagaaatggaaaatagagaataccacaacaaaaattgcatcttatttctttattcatctcttg |
55067549 |
T |
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