View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16589_high_3 (Length: 422)

Name: NF16589_high_3
Description: NF16589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16589_high_3
NF16589_high_3
[»] chr5 (33 HSPs)
chr5 (1-306)||(10735761-10736067)
chr5 (50-306)||(1102616-1102873)
chr5 (1-306)||(11797344-11797651)
chr5 (32-292)||(4127090-4127356)
chr5 (202-293)||(10736951-10737042)
chr5 (109-311)||(35081357-35081560)
chr5 (199-313)||(35047410-35047525)
chr5 (201-311)||(13519466-13519576)
chr5 (224-306)||(28702567-28702650)
chr5 (115-293)||(8521267-8521444)
chr5 (199-293)||(41144528-41144622)
chr5 (205-307)||(4124753-4124857)
chr5 (115-293)||(1010291-1010468)
chr5 (21-293)||(22308630-22308903)
chr5 (50-170)||(30859030-30859151)
chr5 (1-291)||(22047746-22048037)
chr5 (50-170)||(30910878-30910998)
chr5 (21-165)||(36898809-36898957)
chr5 (97-170)||(27705223-27705296)
chr5 (96-270)||(9220364-9220541)
chr5 (97-291)||(325094-325287)
chr5 (104-166)||(11262532-11262594)
chr5 (96-170)||(39603990-39604064)
chr5 (206-306)||(1103985-1104086)
chr5 (201-306)||(11796567-11796672)
chr5 (201-293)||(8523758-8523850)
chr5 (119-182)||(324162-324225)
chr5 (115-165)||(1009325-1009375)
chr5 (68-125)||(15548423-15548478)
chr5 (223-289)||(22049170-22049236)
chr5 (243-288)||(41805848-41805893)
chr5 (241-308)||(23325908-23325976)
chr5 (202-309)||(42642023-42642131)
[»] scaffold0219 (2 HSPs)
scaffold0219 (21-306)||(8022-8308)
scaffold0219 (209-306)||(6893-6991)
[»] chr2 (33 HSPs)
chr2 (21-234)||(8320824-8321042)
chr2 (43-293)||(28611107-28611356)
chr2 (50-306)||(4920920-4921176)
chr2 (164-293)||(19398775-19398904)
chr2 (203-291)||(19397544-19397632)
chr2 (194-293)||(1309410-1309509)
chr2 (1-170)||(18616818-18616985)
chr2 (224-306)||(1149223-1149306)
chr2 (84-293)||(34513448-34513657)
chr2 (50-170)||(42641720-42641841)
chr2 (199-310)||(1310678-1310790)
chr2 (96-271)||(29219419-29219596)
chr2 (96-271)||(29332718-29332895)
chr2 (50-173)||(43034340-43034454)
chr2 (201-306)||(28610020-28610126)
chr2 (68-173)||(43033213-43033319)
chr2 (247-306)||(102414-102474)
chr2 (224-306)||(1147747-1147830)
chr2 (32-170)||(11317209-11317348)
chr2 (202-293)||(25559294-25559385)
chr2 (104-170)||(32469285-32469351)
chr2 (105-293)||(34463980-34464168)
chr2 (202-293)||(25561672-25561763)
chr2 (199-269)||(23233706-23233776)
chr2 (97-270)||(35903543-35903715)
chr2 (106-138)||(30748646-30748678)
chr2 (201-293)||(34512826-34512918)
chr2 (202-293)||(40556952-40557043)
chr2 (97-170)||(6030377-6030450)
chr2 (254-306)||(8320780-8320833)
chr2 (223-292)||(29080196-29080265)
chr2 (247-306)||(101995-102055)
chr2 (105-181)||(34467630-34467706)
[»] chr1 (47 HSPs)
chr1 (50-293)||(48527546-48527789)
chr1 (1-172)||(24517428-24517600)
chr1 (4-172)||(26802073-26802242)
chr1 (1-141)||(40109522-40109664)
chr1 (43-311)||(5612938-5613208)
chr1 (51-308)||(26286408-26286666)
chr1 (97-293)||(12665803-12665998)
chr1 (1-293)||(7306066-7306359)
chr1 (50-307)||(14478263-14478522)
chr1 (50-306)||(51445588-51445845)
chr1 (202-316)||(48528910-48529025)
chr1 (52-170)||(16964988-16965106)
chr1 (97-270)||(18821647-18821820)
chr1 (202-289)||(12667288-12667375)
chr1 (50-173)||(52078005-52078128)
chr1 (164-308)||(7304808-7304953)
chr1 (202-306)||(26287797-26287902)
chr1 (106-174)||(13147333-13147401)
chr1 (25-173)||(9226050-9226199)
chr1 (1-141)||(49801782-49801919)
chr1 (199-291)||(40533614-40533706)
chr1 (199-293)||(28050333-28050427)
chr1 (84-270)||(46467181-46467366)
chr1 (109-270)||(3617417-3617578)
chr1 (74-178)||(6049309-6049414)
chr1 (25-181)||(35943282-35943439)
chr1 (50-269)||(48096894-48097111)
chr1 (201-306)||(14479527-14479633)
chr1 (68-170)||(15232888-15232990)
chr1 (88-170)||(45584906-45584988)
chr1 (50-172)||(44999321-44999445)
chr1 (223-308)||(5611722-5611808)
chr1 (201-286)||(28051619-28051704)
chr1 (120-181)||(15746697-15746758)
chr1 (50-137)||(13894781-13894869)
chr1 (21-141)||(46318450-46318570)
chr1 (50-93)||(3616752-3616795)
chr1 (248-309)||(48492724-48492786)
chr1 (152-182)||(48492852-48492882)
chr1 (147-293)||(49802854-49802999)
chr1 (223-292)||(24499689-24499758)
chr1 (114-174)||(9482586-9482646)
chr1 (106-170)||(9485221-9485285)
chr1 (102-182)||(27814415-27814495)
chr1 (102-174)||(41872707-41872779)
chr1 (97-173)||(41873879-41873955)
chr1 (97-181)||(46110405-46110489)
[»] chr8 (36 HSPs)
chr8 (50-293)||(31845656-31845898)
chr8 (43-305)||(43202095-43202362)
chr8 (1-170)||(22620019-22620191)
chr8 (50-306)||(9854739-9854997)
chr8 (52-270)||(24192525-24192744)
chr8 (50-270)||(20180534-20180755)
chr8 (50-285)||(17455067-17455302)
chr8 (78-270)||(10669333-10669526)
chr8 (202-307)||(31844365-31844471)
chr8 (199-287)||(42793717-42793805)
chr8 (199-311)||(38697861-38697974)
chr8 (202-293)||(28291307-28291398)
chr8 (1-170)||(32695088-32695254)
chr8 (50-170)||(32798391-32798512)
chr8 (202-306)||(43203293-43203398)
chr8 (220-309)||(28291396-28291486)
chr8 (226-293)||(24306162-24306229)
chr8 (115-270)||(42877654-42877808)
chr8 (104-293)||(38696320-38696509)
chr8 (96-170)||(42098699-42098773)
chr8 (68-161)||(13117511-13117604)
chr8 (50-181)||(6397906-6398038)
chr8 (97-173)||(14840807-14840883)
chr8 (225-288)||(24305070-24305133)
chr8 (86-293)||(45437380-45437586)
chr8 (163-292)||(28420148-28420277)
chr8 (109-270)||(42362671-42362831)
chr8 (223-291)||(7844725-7844793)
chr8 (199-279)||(35799477-35799557)
chr8 (97-183)||(30786799-30786885)
chr8 (53-158)||(40437458-40437565)
chr8 (50-170)||(42870950-42871071)
chr8 (248-293)||(42878875-42878920)
chr8 (97-170)||(45281096-45281169)
chr8 (105-181)||(8571532-8571608)
chr8 (97-141)||(37400944-37400988)
[»] chr4 (47 HSPs)
chr4 (1-172)||(41349339-41349511)
chr4 (25-318)||(1519797-1520091)
chr4 (50-308)||(26629787-26630045)
chr4 (50-270)||(44498495-44498717)
chr4 (50-306)||(26496170-26496427)
chr4 (50-272)||(36845442-36845665)
chr4 (202-293)||(36846572-36846663)
chr4 (32-181)||(56085471-56085620)
chr4 (202-308)||(35348793-35348900)
chr4 (32-170)||(7707725-7707863)
chr4 (202-307)||(39056422-39056528)
chr4 (21-170)||(2312313-2312461)
chr4 (202-306)||(26631232-26631337)
chr4 (50-271)||(13165530-13165751)
chr4 (224-306)||(35350143-35350226)
chr4 (96-170)||(27850844-27850918)
chr4 (50-269)||(40723264-40723480)
chr4 (104-218)||(4871581-4871695)
chr4 (224-306)||(39057802-39057885)
chr4 (201-306)||(8363401-8363507)
chr4 (202-306)||(1521207-1521312)
chr4 (32-172)||(19750136-19750277)
chr4 (32-172)||(19789529-19789670)
chr4 (84-170)||(1794548-1794634)
chr4 (96-170)||(52240013-52240087)
chr4 (208-293)||(26425784-26425869)
chr4 (97-270)||(53432097-53432270)
chr4 (208-264)||(26491458-26491514)
chr4 (50-167)||(52138652-52138771)
chr4 (202-293)||(37106263-37106354)
chr4 (104-170)||(11968647-11968713)
chr4 (199-293)||(36243531-36243625)
chr4 (201-316)||(26495110-26495226)
chr4 (50-164)||(34326868-34326982)
chr4 (308-346)||(43776940-43776978)
chr4 (199-293)||(56157506-56157600)
chr4 (105-181)||(15449990-15450069)
chr4 (201-270)||(44499996-44500065)
chr4 (97-270)||(53435661-53435834)
chr4 (43-170)||(6349402-6349532)
chr4 (102-170)||(42810116-42810184)
chr4 (223-291)||(42872333-42872401)
chr4 (97-173)||(49896492-49896568)
chr4 (209-293)||(56156947-56157031)
chr4 (226-293)||(52137438-52137505)
chr4 (241-308)||(20620135-20620203)
chr4 (97-141)||(23103917-23103960)
[»] chr7 (38 HSPs)
chr7 (84-270)||(35295734-35295920)
chr7 (97-293)||(669297-669492)
chr7 (50-293)||(43441358-43441601)
chr7 (50-270)||(44372764-44372985)
chr7 (50-270)||(44381620-44381841)
chr7 (102-306)||(2414747-2414948)
chr7 (202-303)||(43442776-43442878)
chr7 (50-306)||(39981315-39981571)
chr7 (1-140)||(22537725-22537861)
chr7 (224-310)||(10957189-10957276)
chr7 (50-306)||(41328217-41328474)
chr7 (202-306)||(10955843-10955948)
chr7 (50-173)||(16756003-16756125)
chr7 (202-289)||(666742-666829)
chr7 (2-170)||(32255126-32255290)
chr7 (68-279)||(13564117-13564329)
chr7 (50-170)||(11502281-11502401)
chr7 (105-181)||(46201255-46201331)
chr7 (224-321)||(26135623-26135722)
chr7 (104-170)||(43460737-43460803)
chr7 (102-179)||(30334555-30334631)
chr7 (50-291)||(47059122-47059368)
chr7 (43-181)||(47060329-47060468)
chr7 (97-170)||(40811456-40811529)
chr7 (97-293)||(3413544-3413740)
chr7 (102-166)||(22336119-22336183)
chr7 (147-291)||(32256354-32256497)
chr7 (201-311)||(41329482-41329593)
chr7 (50-141)||(48312204-48312296)
chr7 (250-309)||(3414895-3414955)
chr7 (224-311)||(26146742-26146830)
chr7 (247-317)||(7354491-7354562)
chr7 (82-181)||(47454460-47454559)
chr7 (109-190)||(22337292-22337373)
chr7 (152-181)||(44554730-44554759)
chr7 (231-306)||(8426928-8427004)
chr7 (226-270)||(25533223-25533267)
chr7 (201-289)||(35296830-35296918)
[»] chr6 (21 HSPs)
chr6 (1-193)||(11967328-11967523)
chr6 (54-308)||(11722782-11723038)
chr6 (1-170)||(17837752-17837920)
chr6 (1-170)||(29381542-29381710)
chr6 (202-293)||(11968490-11968581)
chr6 (21-169)||(5187453-5187601)
chr6 (32-170)||(7311566-7311705)
chr6 (224-306)||(30231476-30231559)
chr6 (1-162)||(18346564-18346722)
chr6 (104-293)||(23397270-23397458)
chr6 (50-162)||(23392358-23392472)
chr6 (224-306)||(30232941-30233024)
chr6 (224-293)||(138241-138310)
chr6 (224-293)||(146262-146331)
chr6 (224-306)||(136625-136708)
chr6 (227-293)||(11967260-11967326)
chr6 (105-173)||(12669855-12669923)
chr6 (250-292)||(6452572-6452614)
chr6 (104-293)||(17839055-17839243)
chr6 (78-173)||(15728862-15728958)
chr6 (230-270)||(35037168-35037208)
[»] chr3 (42 HSPs)
chr3 (84-270)||(14745095-14745281)
chr3 (3-293)||(37415007-37415299)
chr3 (164-293)||(37416413-37416542)
chr3 (50-293)||(13620932-13621175)
chr3 (1-162)||(26886416-26886575)
chr3 (104-293)||(20288139-20288328)
chr3 (2-269)||(3208520-3208788)
chr3 (1-170)||(35371043-35371211)
chr3 (21-170)||(34819116-34819265)
chr3 (50-174)||(49379833-49379957)
chr3 (50-170)||(10731989-10732109)
chr3 (2-138)||(41264468-41264601)
chr3 (115-293)||(3455550-3455729)
chr3 (32-170)||(38242357-38242496)
chr3 (68-171)||(53614151-53614254)
chr3 (78-173)||(10301066-10301161)
chr3 (96-270)||(10338773-10338947)
chr3 (77-234)||(20314651-20314809)
chr3 (104-234)||(20336572-20336702)
chr3 (104-173)||(48083359-48083428)
chr3 (50-137)||(24487180-24487266)
chr3 (96-170)||(27841616-27841690)
chr3 (105-270)||(28909523-28909686)
chr3 (121-270)||(7270358-7270507)
chr3 (84-181)||(42685000-42685097)
chr3 (67-140)||(46368973-46369045)
chr3 (201-307)||(13621970-13622077)
chr3 (50-126)||(53622831-53622907)
chr3 (43-139)||(54110138-54110233)
chr3 (105-291)||(53420330-53420517)
chr3 (251-293)||(3817325-3817367)
chr3 (25-91)||(50809563-50809629)
chr3 (25-91)||(50810742-50810808)
chr3 (25-91)||(50865056-50865122)
chr3 (25-91)||(50866233-50866299)
chr3 (97-279)||(53194520-53194701)
chr3 (240-293)||(20599513-20599566)
chr3 (163-292)||(50810808-50810937)
chr3 (163-292)||(50864927-50865056)
chr3 (121-181)||(18442372-18442432)
chr3 (121-181)||(19487446-19487506)
chr3 (201-293)||(49380966-49381058)
[»] scaffold0011 (1 HSPs)
scaffold0011 (25-293)||(127445-127713)
[»] scaffold0118 (1 HSPs)
scaffold0118 (48-170)||(43433-43554)
[»] scaffold0077 (1 HSPs)
scaffold0077 (84-170)||(54080-54164)
[»] scaffold0114 (1 HSPs)
scaffold0114 (201-318)||(38526-38644)
[»] scaffold2071 (1 HSPs)
scaffold2071 (68-293)||(559-785)
[»] scaffold0092 (1 HSPs)
scaffold0092 (201-293)||(39836-39928)
[»] scaffold0031 (2 HSPs)
scaffold0031 (84-181)||(124092-124188)
scaffold0031 (68-170)||(125108-125212)
[»] scaffold0034 (1 HSPs)
scaffold0034 (104-165)||(108654-108715)
[»] scaffold0019 (1 HSPs)
scaffold0019 (250-293)||(61863-61906)


Alignment Details
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 10736067 - 10735761
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10736067 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtccttttttaaaaaattaatca 10735968  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||  ||    
T  10735967 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagatatttggagttaaagttaacggttagggacctt 10735868  T
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaa 299  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||    
T  10735867 tttgactaacggagcaaaacaagagggaccaaaacgttgattttacgagttatgggaccaaaatgaaaacaagtaattacttaggggaccaaaagtccaa 10735768  T
Q  300 ttaagcc 306  Q
    |||||||    
T  10735767 ttaagcc 10735761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 50 - 306
Target Start/End: Complemental strand, 1102873 - 1102616
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||| ||| ||||| | ||||| || |||||||||   |||| ||||||||||||||||||||||||| ||||||||||||||  || |||    
T  1102873 agataaaatacacttgcataatccactggtcatcatttaaaaaaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccactctta 1102774  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | ||||||| ||||||||||||||| ||||||  |||| || |||||  |||||||  ||||||| |||    |||||||| ||| ||| ||||||||||    
T  1102773 aggttggtctaccatagacatttggggttaaagttaacagtcagggacctttttgatgaacggagaaaacgttgagggacctaaatgttgattttacgag 1102674  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    |||||||||||| ||| ||||||  ||||| ||| |||||| ||||| ||||||||||    
T  1102673 ttatgggaccaatatgtaaacaacaaattagttatgggaccaaaagtccaattaagcc 1102616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 11797344 - 11797651
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaat-taatc 99  Q
    ||||||||||||||| || ||||||||||| |  ||||| |||||||||| |||||||| || || |||||| ||||||||||||||||||||  |||||    
T  11797344 agaagatgaagaaaaagtacaaaaaattaggtaatgatgttgcaccattaaataaaataaacatgtgtaatccaatggtcctcttttaaaaaaaataatc 11797443  T
Q  100 agacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatat 199  Q
      |||||| ||||||||| |  || || | ||||| ||||||     ||     || |||||  |||||||||  |||||||  |||| | || |||  |    
T  11797444 taacggttaaaattaaaagacatattaaggtctattgtggacaaacattgtttgtgttccactttagacatttaaagttaaagttaacagctaaggacct 11797543  T
Q  200 ttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttca 298  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||   |||||||||||||||||||| || ||    
T  11797544 ttttgactaacggagaaaaacaagagggaccaaaatgttgattttacgagttatgagaccaaaatgtaaactcataattatttaggggaccaaatgtcca 11797643  T
Q  299 attaagcc 306  Q
    ||||||||    
T  11797644 attaagcc 11797651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 292
Target Start/End: Original strand, 4127090 - 4127356
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttta----aaaaattaa--tcagacggtttaaattaaaataattaat 125  Q
    ||||| |||| || ||| |||||||||| ||||| | |||| |||||| ||||||||    |||||| ||  ||| | ||||||||||||| |||||||     
T  4127090 tgttggtggtacatcataagataaaatagacctgtgcaatctaatggttctcttttacaaaaaaaataaaaatcaaatggtttaaattaaattaattaac 4127189  T
Q  126 atgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagag 225  Q
    | ||||||||||||||  || ||||  ||| || | ||||||||||||| ||||||  ||||||  || ||  |||| |||||||||||||||    ||     
T  4127190 aggatctatggtggaccacttttaagattgatctatcatagacatttggggttaaagttaacggcaagagactttttagactaacggagcaaacgttgaa 4127289  T
Q  226 ggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaa 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  4127290 ggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttagaggaccaa 4127356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 10736951 - 10737042
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  10736951 ttgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaagaaattacttaggggaccaaa 10737042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 311
Target Start/End: Original strand, 35081357 - 35081560
Alignment:
Q  109 aaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgacta 208  Q
    ||||||||| ||||| || | | ||||||||||  || |||| |||| ||||| |||||||||||  ||||||  |||||||||| |||   ||||||||    
T  35081357 aaattaaaaaaattattaaggtttatggtggacaactcttaaggttgatccactatagacatttgaggttaaagttaacggttagtgatcaatttgacta 35081456  T
Q  209 acggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcca 307  Q
    | ||||   |||  || ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||| ||||||||||     
T  35081457 atggaggttaacttgaaggaccaaaacgttgattttacgagttatgggaccaaaatgaaaacaaacaattacttaggggaccaaaagtccaattaagcct 35081556  T
Q  308 atat 311  Q
    ||||    
T  35081557 atat 35081560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 313
Target Start/End: Complemental strand, 35047525 - 35047410
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttagggga-ccaaagttc 297  Q
    |||||||||||||||||||||||| ||||||   |||||| |||||||||||||||||||||||||||||||| | ||| | |||||||| | ||| | |    
T  35047525 tttttgactaacggagcaaaacaaaagggacttgaacgttgattttacgagttatgggaccaaaatgaaaacacgaaataacttaggggatcaaaaatcc 35047426  T
Q  298 aattaagccaatatat 313  Q
    ||||||||||||||||    
T  35047425 aattaagccaatatat 35047410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 13519576 - 13519466
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaagttcaat 300  Q
    |||||| ||||||||||||||||| ||||||||| ||| ||||| ||||||||||||| |||||| ||||||| ||||| |||||| || ||||| ||||    
T  13519576 tttgacaaacggagcaaaacaagaaggaccaaaatgttgatttttcgagttatgggactaaaatgtaaacaagaaattagttagggaacaaaagtccaat 13519477  T
Q  301 taagccaatat 311  Q
    |||||| ||||    
T  13519476 taagcctatat 13519466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 28702650 - 28702567
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac-caaagttcaattaagcc 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||  ||||| ||||||||||    
T  28702650 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttaggggacaaaaagtccaattaagcc 28702567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 293
Target Start/End: Complemental strand, 8521444 - 8521267
Alignment:
Q  115 aaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggag 214  Q
    |||||||||||| ||||||||||||||   | |||| |||||||||||||| |||||||| ||||||  |||| | | ||||| | ||||||| ||||||    
T  8521444 aaataattaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccg-tcgggatttatttgactgacggag 8521346  T
Q  215 caaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
      ||||  ||||||||||||| | | |||||  |||||||||||||||||||||||  | ||||| ||| |||||||||    
T  8521345 acaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggaccaaa 8521267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 41144528 - 41144622
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||||||||||||  | ||||||||||||||| ||||||  | |||||||||||||||||||||||  ||||| |||||||||||||    
T  41144528 tttttgactaacggagcaaaatcaaagggaccaaaacgttgattttagaatttatgggaccaaaatgaaaacaacaaattaattaggggaccaaa 41144622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 4124857 - 4124753
Alignment:
Q  205 actaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaa-ttatttaggggacc-aaagttcaatta 302  Q
    |||||||||||||||||| ||||||||||||||| |||||| || |||||| ||||||||||||||||| || ||| |||| ||||| ||||| ||||||    
T  4124857 actaacggagcaaaacaaaagggaccaaaacgttgattttatgaattatggaaccaaaatgaaaacaagaaatttacttagaggaccaaaagtccaatta 4124758  T
Q  303 agcca 307  Q
    |||||    
T  4124757 agcca 4124753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 293
Target Start/End: Original strand, 1010291 - 1010468
Alignment:
Q  115 aaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggag 214  Q
    |||||||||||| ||||||||| ||||  || |||| |||||||||||||| |||||||| ||||||  |||| | | ||||| | ||||||| ||||||    
T  1010291 aaataattaataggatctatggcggaccactcttaaggttggtccaccatacacatttggggttaaagttaaccg-tcgggatttatttgactgacggag 1010389  T
Q  215 caaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
      ||||  ||||||||||||| | | |||||  ||||||||||||||||| |||||  | ||||| ||| |||||||||    
T  1010390 acaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaataaaaacttgaaattaattaagggaccaaa 1010468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 293
Target Start/End: Original strand, 22308630 - 22308903
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaata 119  Q
    |||||||||| ||||| |||| |||| | ||  | |||| || ||| ||||| ||||||| |||||| |||||  | |||| | |||||| ||||||| |    
T  22308630 aaaaaattaggtgttgttggtacaccgtaagtaacaatagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaa 22308729  T
Q  120 attaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaa 219  Q
     ||||||   ||||||||||||  || |||| || |||||||||||||||||||| ||||||  ||||    | |||| | |||| | ||||||||||||    
T  22308730 tttaataatgtctatggtggaccactcttaaggtaggtccaccatagacatttggggttaaacttaacaaccatggatttatttggcaaacggagcaaaa 22308829  T
Q  220 caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
       ||||||| ||||||    |||||  | |||||||||||||||||||||| | |||||||||||||||||||    
T  22308830 tgtgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaaa 22308903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 30859030 - 30859151
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaa-tcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||| || ||  ||||| |||||| ||||||| |||||  || ||| ||||||||||||||||||||||||| ||||||||||||||  || ||    
T  30859030 agataaaatagacttgtctaatccaatggttctctttttaaaaagaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactctt 30859129  T
Q  149 aacgttggtccaccatagacat 170  Q
    ||  ||||||||||||||||||    
T  30859130 aagattggtccaccatagacat 30859151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 22048037 - 22047746
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttt--aaaaaattaat 98  Q
    ||||||||||||||| |   |||||||||| |||||||||| ||   | |||||||||| ||||   ||||  |||||| |||||||  ||||||  |||    
T  22048037 agaagatgaagaaaagg---aaaaaattaggtgttgatggtacattgtaagataaaatagacctttctaattcaatggttctcttttcaaaaaaaaaaat 22047941  T
Q  99 cagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccataga---catttggagttaaaaataacggttaggg 195  Q
    || ||||||||||||||||||||| ||| ||| ||||||||||  || |||| |||| |||||||||||   ||||| ||||||||  |||| |  | ||    
T  22047940 caaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagcca-gg 22047842  T
Q  196 atatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    || | |||| | ||||||| |||| | |||||||||||||||   |||||  | || ||||||||||||||||||  | ||||| ||| |||||||    
T  22047841 atttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggacca 22047746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 30910998 - 30910878
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||| || ||| ||||  |||||| |||||||||| ||  | ||| |||||| |||||||||||||||||| ||||||||||||||  || |||    
T  30910998 agataaaatagacatgcctaattcaatggttctcttttaaagaaaaactcaaacggttgaaattaaaataattaataggatctatggtggaccactctta 30910899  T
Q  150 acgttggtccaccatagacat 170  Q
    | |||||||||||| ||||||    
T  30910898 aggttggtccaccaaagacat 30910878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 36898809 - 36898957
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttta----aaaaattaatcagacggtttaaattaaa 116  Q
    |||||||||| ||||| |||| || | | |||||||||| || ||||||||| ||||||| |||||||    |||||  ||||| | |||||||| ||||    
T  36898809 aaaaaattaggtgttggtggtacatcgtaagataaaatagacatgcgtaatccaatggtcatcttttagaagaaaaaaaaatcaaagggtttaaactaaa 36898908  T
Q  117 ataattaatatgatctatggtggactgctgttaacgttggtccaccata 165  Q
    |||||||| |  |||||||||||||| || |||| ||||| ||||||||    
T  36898909 ataattaacagaatctatggtggactacttttaaggttgggccaccata 36898957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 27705223 - 27705296
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||  || |||| |||||||||||||||||||    
T  27705223 atcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27705296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 270
Target Start/End: Original strand, 9220364 - 9220541
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtgg---actgctgttaacgttggtccaccatagacatttggagttaaaaataacggtta 192  Q
    ||||| ||||||||||||||||||||||||| ||| ||||| ||   |||  | |||| ||||||||||||||||||||||  ||||||  ||||    |    
T  9220364 aatcaaacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccatagacatttgaggttaaagttaacaacga 9220463  T
Q  193 gggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    ||||  ||||||| |||| ||||||||   ||||||||||||   | |||| | || |||||||| ||||||||||||    
T  9220464 gggacttttttgaataacagagcaaaagttgagggaccaaaattctgatttcaagacttatgggaacaaaatgaaaac 9220541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 291
Target Start/End: Original strand, 325094 - 325287
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||| ||||||| | |||||||| | |||| | |||||  || |||| ||||||||||||||||||||| ||||||||  |||| | | ||||    
T  325094 atcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacatttagagttaaagttaacag-tcggga 325192  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    | | |||| | ||||||| |||||  |||||||||||| ||   |||||  | || ||||||||||||||||||  | ||||||||  |||||||    
T  325193 tttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 11262594 - 11262532
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatag 166  Q
    ||||||||||| ||||||||||| ||||||||||||||  || |||| |||||||||||||||    
T  11262594 ggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccaccatag 11262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 39604064 - 39603990
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||| || |||||||||||||||||||||| |||||||||||||   || |||| ||||||| |||||||||||    
T  39604064 aatcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacat 39603990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 1103985 - 1104086
Alignment:
Q  206 ctaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaag 304  Q
    ||||| ||| ||||||||||| ||  ||| ||| ||||||||||||||||||| ||||||  |||||  ||||| |||||||||| ||||| ||||||||    
T  1103985 ctaacagagaaaaacaagaggaactgaaatgttgattttacgagttatgggactaaaatgttaacaacaaattacttaggggaccaaaagtccaattaag 1104084  T
Q  305 cc 306  Q
    ||    
T  1104085 cc 1104086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 11796672 - 11796567
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaa 299  Q
    ||||||| | |||||||||| | |||||||||||  | | |||||| | |||||||||||||||| ||||   |||||||||||||||||||| || |||    
T  11796672 tttgactgagggagcaaaacca-agggaccaaaatatgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatgtccaa 11796574  T
Q  300 ttaagcc 306  Q
    |||||||    
T  11796573 ttaagcc 11796567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 8523758 - 8523850
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||| ||||||  ||||| || ||| |||||| | | |||||  |||||||||||||||||||||||  | ||||| |||||||||||||    
T  8523758 tttgactgacggagacaaacatgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaggggaccaaa 8523850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 324225 - 324162
Alignment:
Q  119 aattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaa 182  Q
    |||||||| | |||||| |||||  || |||| ||||||||||||||||||||| |||||||||    
T  324225 aattaataaggtctatgatggaccactattaaagttggtccaccatagacatttagagttaaaa 324162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 1009375 - 1009325
Alignment:
Q  115 aaataattaatatgatctatggtggactgctgttaacgttggtccaccata 165  Q
    |||||||||||| ||||||||||||||  || |||| ||||||||||||||    
T  1009375 aaataattaataggatctatggtggaccactcttaaggttggtccaccata 1009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 15548478 - 15548423
Alignment:
Q  68 taatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaat 125  Q
    ||||| |||||| |||||||||||||  ||||| | ||||||||||||||||||||||    
T  15548478 taatccaatggttctcttttaaaaaa--aatcaaatggtttaaattaaaataattaat 15548423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 22049170 - 22049236
Alignment:
Q  223 gagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac 289  Q
    |||||||||||||||   |||||  | |||||||||||||||||||||  | |||||||||||||||    
T  22049170 gagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggac 22049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 41805893 - 41805848
Alignment:
Q  243 ttacgagttatgggaccaaaatgaaaacaagtaattatttagggga 288  Q
    |||| |||||||||| ||||||||||||||| ||||| ||||||||    
T  41805893 ttacaagttatgggatcaaaatgaaaacaagaaattagttagggga 41805848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 23325976 - 23325908
Alignment:
Q  241 ttttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagccaa 308  Q
    |||||| | |||||||||||||||| ||||   ||||||||||| |||||||| || ||||||||||||    
T  23325976 ttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagccaa 23325908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 42642023 - 42642131
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaagttc-aat 300  Q
    |||||| |||| ||||||  | |||||| ||| |||| ||||||  | |||||||| ||||||||||||||  ||||| |||| ||||||||  || |||    
T  42642023 ttgactgacggggcaaaagcaaagggactaaatcgttgattttagaacttatgggatcaaaatgaaaacaataaattagttagaggaccaaatatcgaat 42642122  T
Q  301 taagccaat 309  Q
    |||||||||    
T  42642123 taagccaat 42642131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 306
Target Start/End: Original strand, 8022 - 8308
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatt-aatcagacggtttaaattaaaata 119  Q
    |||||||||| |||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  8022 aaaaaattaggtgttgatggtgcaccattagataaaatagacttgcatgatcaaatggtcctcttttaaaaaaaacaatcaaacggtttaaattaaaata 8121  T
Q  120 attaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaa 219  Q
    |||||||| ||||||| |||||  || |||| |||| |||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||| ||||    
T  8122 attaatataatctatgatggacc-ctcttaaggttgatccaccatagacatttggggttaaaattaacggttagggatcaaattgactaacggagtaaaa 8220  T
Q  220 caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    | ||||||||||||| ||| |||||||||||||||||||||||||| ||||||  ||||| |||||||||| ||||||||||||||||    
T  8221 cgagagggaccaaaatgttgattttacgagttatgggaccaaaatgtaaacaaagaattacttaggggaccaaaagttcaattaagcc 8308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 6991 - 6893
Alignment:
Q  209 acggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
    |||||||||||| | ||| ||||||| |||  |||||| | |||||||||||||||| |||||  ||||||||||| |||||||| || ||||||||||    
T  6991 acggagcaaaaccaaaggaaccaaaatgttggttttacaatttatgggaccaaaatgtaaacacataattatttagaggaccaaatgtccaattaagcc 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 7e-53; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 21 - 234
Target Start/End: Complemental strand, 8321042 - 8320824
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaa-aaaattaatcagacggtttaaattaaaata 119  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||| ||||  ||||| ||||||||||||||||||    
T  8321042 aaaaaattaggtgttgatggtgcaccattagataaaatagacttgcgtgatcaaatgttcctcttttaaaaaaaacaatcaaacggtttaaattaaaata 8320943  T
Q  120 attaatatgatctatggtggactgctgttaacgttggtccacc----atagacatttggagttaaaaataacggttagggatatttttgactaacggagc 215  Q
    |||||||| ||||||||||||| ||| |||| | |||||||||    |||||||||||| ||||||| ||||||||||||||    ||||||| ||||||    
T  8320942 attaatataatctatggtggaccgctcttaaggatggtccaccatagatagacatttggggttaaaattaacggttagggatcaaattgactagcggagc 8320843  T
Q  216 aaaacaagagggaccaaaa 234  Q
    ||||| | |||||||||||    
T  8320842 aaaactaaagggaccaaaa 8320824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 293
Target Start/End: Original strand, 28611107 - 28611356
Alignment:
Q  43 caccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggact 142  Q
    |||||| ||||||||||||||||||||||  ||||  |||| ||| |||||  ||||| |||||||||||| |||||||||||| ||||||| ||||||     
T  28611107 caccataagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaatcaaacggtttaaatt-aaataattaataggatctatagtggacc 28611205  T
Q  143 gctgttaacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaat 241  Q
      | |||| || |||||||||||||||||| || ||||||   ||| |||| | |  ||||||||| |||||||||||| | | |||||||||  | |||    
T  28611206 atttttaaagtcggtccaccatagacatttgggggttaaagtaaacagtta-gaacctttttgactgacggagcaaaaccaaaaggaccaaaatatgaat 28611304  T
Q  242 tttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||| | |||||||||||||||| ||||   ||||||||||| ||||||||    
T  28611305 tttacaatttatgggaccaaaatgtaaacgcataattatttagaggaccaaa 28611356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 50 - 306
Target Start/End: Original strand, 4920920 - 4921176
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||  ||||| ||||||||||||| ||||||||||| ||| ||||||||||   | ||    
T  4920920 agataaaatacacctgcgtaatccaatgatcctccttttaaaaaa--aatcaaacggtttaaattagaataattaataggatttatggtggaccattttt 4921017  T
Q  149 aacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttac 246  Q
    || ||||||| ||||||||||||| || ||||||  |||| | || |||  ||||| ||| || |||||||| ||||| ||||||||| || | ||||||    
T  4921018 aaagttggtctaccatagacatttgggggttaaagttaacaggta-ggacctttttaactgacagagcaaaaccaaga-ggaccaaaatgtgagttttac 4921115  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
     | ||||||||| |||||| ||||   ||||||||||| |||||||| || ||||||||||    
T  4921116 aatttatgggactaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagcc 4921176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 19398775 - 19398904
Alignment:
Q  164 tagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaa 263  Q
    |||||||||  |||||||  ||||||| |||||  ||| |||||||||||||||||||||||||||||||| ||   |||||| | ||||||||||||||    
T  19398775 tagacatttaaagttaaagttaacggtcagggacttttctgactaacggagcaaaacaagagggaccaaaatgtaggttttacaatttatgggaccaaaa 19398874  T
Q  264 tgaaaacaagtaattatttaggggaccaaa 293  Q
    || ||||  |||||||||||||| ||||||    
T  19398875 tgtaaaccggtaattatttagggaaccaaa 19398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 19397632 - 19397544
Alignment:
Q  203 tgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    |||||||||||||||||| ||||||||||||| |||| |||||  | |||||||||||||||| ||||  |||||||||||||||||||    
T  19397632 tgactaacggagcaaaacgagagggaccaaaatgttagttttaaaatttatgggaccaaaatgtaaactggtaattatttaggggacca 19397544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 1309509 - 1309410
Alignment:
Q  194 ggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||| ||||||||||||  |  ||||||||||||||||||| ||||||||||||||||||  ||| |||||||||||||  ||||| |||||||||||||    
T  1309509 ggatctttttgactaacaaaagaaaacaagagggaccaaaatgttaattttacgagttatatgactaaaatgaaaacaacaaattacttaggggaccaaa 1309410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 18616818 - 18616985
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    ||||||||||||||| |   |||||||||| ||||| |||| || | | |||||||||| ||||   ||||| |||||| |||||||  ||||  |||||    
T  18616818 agaagatgaagaaaagga--aaaaaattaggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctcttttttaaaaaaaatca 18616915  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     |||||| |||||||||||||||||| ||||||||||||||  || ||||   |||||||||||||||||    
T  18616916 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacat 18616985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 1149223 - 1149306
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||  ||||| |||||||||| ||||| ||||||||||    
T  1149223 agggaccaaaacgttgattttagaagttatgggaccaaaatgaaaacaacaaattagttaggggaccaaaagtccaattaagcc 1149306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 293
Target Start/End: Original strand, 34513448 - 34513657
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaa 183  Q
    ||||||||||   |||| |||||||||||||||| |||||||| | |||||||||||   || |||| ||||||| |||||| |||||||| |||||       
T  34513448 ttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccatatacatttggggttaagct 34513547  T
Q  184 taacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattattta 283  Q
    |||||   |||||  | ||||||||||||||  ||||  ||| |||| |||| | | |||||  | |||||| |||||||||||||   ||||||| |||    
T  34513548 taacgaccagggaattatttgactaacggaggcaaacccgagagacctaaacatgagttttattaattatggaaccaaaatgaaaattggtaattaatta 34513647  T
Q  284 ggggaccaaa 293  Q
    ||||||||||    
T  34513648 ggggaccaaa 34513657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 42641720 - 42641841
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||||| ||| ||| || | | |||||||||||||  | |||| || |||||||||||||||||||||| |||||||||| |||  || ||    
T  42641720 agataaaatacacctacgtgatccaacgattctcttttaaaaaaaaagatcaaacagtttaaattaaaataattaataggatctatggtagaccactctt 42641819  T
Q  149 aacgttggtccaccatagacat 170  Q
    || ||||| |||||||||||||    
T  42641820 aaggttggcccaccatagacat 42641841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 1310678 - 1310790
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttc 297  Q
    ||||||||||||| | |||||| ||||||||||||| ||| ||||||||||||||| ||  |||||||||||||  ||||| || |||||||   ||| |    
T  1310678 tttttgactaacgaaacaaaacgagagggaccaaaatgttgattttacgagttatgagattaaaatgaaaacaacaaattacttcggggaccttgagtcc 1310777  T
Q  298 aattaagccaata 310  Q
    |||||||||||||    
T  1310778 aattaagccaata 1310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 271
Target Start/End: Complemental strand, 29219596 - 29219419
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat---ttggagttaaaaataacggtta 192  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||  || ||||  ||||||||||||||||||   |||| ||||||  |||| |||     
T  29219596 aatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagtt- 29219498  T
Q  193 gggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaaca 271  Q
    ||||| | |||| | ||||||| ||||   ||||||| ||||||  | |||||  | || |||||||||||||||||||    
T  29219497 gggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaaca 29219419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 271
Target Start/End: Complemental strand, 29332895 - 29332718
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat---ttggagttaaaaataacggtta 192  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||  || ||||  ||||||||||||||||||   |||| ||||||  |||| |||     
T  29332895 aatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagtt- 29332797  T
Q  193 gggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaaca 271  Q
    ||||| | |||| | ||||||| ||||   ||||||| ||||||  | |||||  | || |||||||||||||||||||    
T  29332796 gggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaaca 29332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 43034340 - 43034454
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||| || ||| ||||| ||||||| ||||||||||||||||||| ||||||||         |||||||| ||||||||||||||  || |||    
T  43034340 agataaaatagacatgcataatccaatggtcatcttttaaaaaattaatcaaacggttta---------aattaataggatctatggtggaccactctta 43034430  T
Q  150 acgttggtccaccatagacatttg 173  Q
    | |||| |||||||||||||||||    
T  43034431 aagttgatccaccatagacatttg 43034454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 28610126 - 28610020
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaa 299  Q
    ||||||| |||||||||||| |  |||||||||| || |||||||| | |||||||||||||||| ||||   |||||||||||| ||||||| || |||    
T  28610126 tttgactgacggagcaaaaccaaggggaccaaaatgtgaattttacaatttatgggaccaaaatgtaaactcataattatttaggtgaccaaatgtccaa 28610027  T
Q  300 ttaagcc 306  Q
    |||||||    
T  28610026 ttaagcc 28610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 43033319 - 43033213
Alignment:
Q  68 taatcaaatggtcctcttttaaaa-aattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatag 166  Q
    ||||| ||||||||||||||| || || | |||| | ||||||||||||||||||||||| | | ||||||||||  || |||| ||||||| |||||||    
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  167 acatttg 173  Q
    |||||||    
T  43033219 acatttg 43033213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 102414 - 102474
Alignment:
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||    
T  102414 gagttatgggaccaaaatgaaaacaagaaattagttaggggaccaaatgatcaattaagcc 102474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 1147830 - 1147747
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    ||||||| ||||||| ||||||  ||||||||||| |||||||||||||  ||||| |||||||||| ||||| ||||||||||    
T  1147830 agggaccgaaacgttgattttagaagttatgggactaaaatgaaaacaacaaattagttaggggaccaaaagtccaattaagcc 1147747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 11317209 - 11317348
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgat 130  Q
    |||||||||| || | | ||||||||||||||| ||  ||| || |||| || |||| ||||| | | || ||| ||||||||||||||||||||| |||    
T  11317209 tgttgatggttcaacctaagataaaatacacctacgggatccaacggtcatcctttttaaaaaatgaccaaacgatttaaattaaaataattaataggat 11317308  T
Q  131 ctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||| |||  || |||| ||||||| |||||||||||    
T  11317309 ctatggtagaccactcttaaggttggtctaccatagacat 11317348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 25559385 - 25559294
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||| |||||||||||  | |||||||||| |||| ||||||  | ||||||||||||||| |||||||  ||||| |||||||||||||    
T  25559385 ttgactgacggagcaaaagcaaagggaccaaatcgttgattttagaacttatgggaccaaaataaaaacaacaaattagttaggggaccaaa 25559294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 32469351 - 32469285
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||||||||||||||||||| ||||||| ||||||  || |||| |||||||||||||| ||||    
T  32469351 ggtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccaccatatacat 32469285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 293
Target Start/End: Complemental strand, 34464168 - 34463980
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttg 204  Q
    ||||||||||||| |  ||||| | ||||||||||||  || |||| ||||||| || |||||||||||| ||||||  |||| || || ||| | ||||    
T  34464168 gtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacatttggggttaaacttaacagtcagagatttatttg 34464069  T
Q  205 actaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    | ||||||||  ||||  || |||||||||  ||  |||||  | ||||   ||||||||||||||  ||||||| |||||||||||||    
T  34464068 attaacggaggcaaacctgatggaccaaaagatttgttttattaattatcaaaccaaaatgaaaactggtaattaattaggggaccaaa 34463980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 25561672 - 25561763
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||| | |||||||||  | |||||||||| |||| ||||||  | |||||||||||||||||||||||  ||||| ||||| |||||||    
T  25561672 ttgactgatggagcaaaagcaaagggaccaaatcgttgattttagaatttatgggaccaaaatgaaaacaacaaattagttaggcgaccaaa 25561763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 23233706 - 23233776
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaa 269  Q
    ||||||| |||||||||||||   |||||||||||| | | |||||| || ||||||||||||||||||||    
T  23233706 tttttgaataacggagcaaaagttgagggaccaaaatgatgattttaagacttatgggaccaaaatgaaaa 23233776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 270
Target Start/End: Complemental strand, 35903715 - 35903543
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||  || | || | |  || | ||||||||||||| ||||||  |||| |  | |||    
T  35903715 atcaaacggtttaaattaaaatatttaataggatctatggtggaccactctaaaag-taatctatcatagacatttggggttaaacttaacagccaagga 35903617  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    | | ||||||| ||||||  | |   ||||||||||||| | | |||||  |||||||||||||||||||||||    
T  35903616 tttatttgactgacggagatataattgagggaccaaaacatgacttttattagttatgggaccaaaatgaaaac 35903543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 30748678 - 30748646
Alignment:
Q  106 tttaaattaaaataattaatatgatctatggtg 138  Q
    |||||||||||||||||||||||||||||||||    
T  30748678 tttaaattaaaataattaatatgatctatggtg 30748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 34512918 - 34512826
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||||||||  |||   |||||| |||||| | | |||||  | |||||||||||||||||||||  ||||||| |||||||||||||    
T  34512918 tttgactaacggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaactggtaattaattaggggaccaaa 34512826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 40557043 - 40556952
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||| |||| ||||||  | |||||||||| |||| ||||||  | ||||| |||||||||||||||||  ||||| |||| ||||||||    
T  40557043 ttgactgacggggcaaaagcaaagggaccaaatcgttgattttagaacttatgagaccaaaatgaaaacaacaaattaattagaggaccaaa 40556952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 6030377 - 6030450
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||| ||||||||||||||||  ||||||| |||||||||| ||   || |||| ||||||||||| |||||||    
T  6030377 atcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtagacat 6030450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 8320833 - 8320780
Alignment:
Q  254 gggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    |||||||||||| ||||||| ||||| |||||||||| ||||| ||||||||||    
T  8320833 gggaccaaaatgtaaacaagaaattacttaggggaccaaaagtccaattaagcc 8320780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 29080196 - 29080265
Alignment:
Q  223 gagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaa 292  Q
    ||||||||||||||| ||||||| ||| ||||  | ||||||||||| ||| ||||| |||||| |||||    
T  29080196 gagggaccaaaacgtgaattttaagagctatgcaatcaaaatgaaaataagaaattaattagggaaccaa 29080265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 102055 - 101995
Alignment:
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
    ||||||||| ||||||||||||||||| ||||| ||||| || |||| | |||||||||||    
T  102055 gagttatggaaccaaaatgaaaacaagaaattagttaggtgatcaaatgatcaattaagcc 101995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 34467706 - 34467630
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||||||||||||| | |||||| | | ||||||||||  || |||| ||| ||||| |||||||||||| |||||||    
T  34467706 gtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatcatagacatttgaagttaaa 34467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 50 - 293
Target Start/End: Complemental strand, 48527789 - 48527546
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||| ||| ||||| ||||||| || |||||||||   |||| || |||||||||||||||||| ||| ||||||||||||||  || |||    
T  48527789 agataaaatacacttgcataatccaatggtcatcatttaaaaaaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactctta 48527690  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | ||||||| ||||||||||||||||||||||  ||||  |||||||  ||||||| ||||  ||||||     ||||||||||| ||||||||||||||    
T  48527689 aagttggtcgaccatagacatttggagttaaagttaacaattagggacctttttgattaacacagcaaacgttaagggaccaaaatgttaattttacgag 48527590  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||    
T  48527589 ttatgggaccaaaatgtaaacaacaaattacttaggggaccaaa 48527546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24517428 - 24517600
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatc 99  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| |||||    
T  24517428 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaataatc 24517527  T
Q  100 agacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacattt 172  Q
    | ||||||||||| ||||| ||||||||||||||| ||||||  || |||| ||| || |||| |||||||||    
T  24517528 aaacggtttaaataaaaatgattaatatgatctatagtggacaactcttaatgttagttcaccttagacattt 24517600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 26802242 - 26802073
Alignment:
Q  4 agatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaa-aaaattaatcaga 102  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||| |||| | |||||||||||||||||||||| |||| |||||| |    
T  26802242 agatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattaaatagaatagacctacataatcaaatggtcctcttttaaaaaaaataatcaaa 26802143  T
Q  103 cggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacattt 172  Q
    |||||||||||||||| ||||||||||||||| ||||||  || |||| |||||| |||| |||||||||    
T  26802142 cggtttaaattaaaatgattaatatgatctatagtggacaactcttaaggttggttcaccttagacattt 26802073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 40109664 - 40109522
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttt--aaaaaattaat 98  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||  |||||| ||||    
T  40109664 agaagatgaaaaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaaataat 40109565  T
Q  99 cagacggtttaaattaaaataattaatatgatctatggtggac 141  Q
    || ||||||||||| ||||| ||||||||||||||| ||||||    
T  40109564 caaacggtttaaataaaaatgattaatatgatctatagtggac 40109522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 43 - 311
Target Start/End: Original strand, 5612938 - 5613208
Alignment:
Q  43 caccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaat-taatcagacggtttaaattaaaataattaatatgatctatggtggac 141  Q
    |||||| ||||||||||||| | ||||||| ||||||| || ||| |||||| |||||| ||||||||||||||||||||||||| |||||||||||||     
T  5612938 caccataagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatcaaacggtttaaattaaaataattaataggatctatggtggat 5613037  T
Q  142 tgctgttaacgttggtccaccatagacatttggagttaaaaataac-ggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaa 240  Q
      || |||| | || ||||||||| |||||||| ||||||  |||| |   |||||  ||||||||||||||||||||    |||||||||| | ||| |    
T  5613038 cact-ttaaaggtgatccaccataaacatttggggttaaagttaacagcgcagggacctttttgactaacggagcaaacgttgagggaccaatatgttga 5613136  T
Q  241 ttttacgagttatgggaccaaaatgaaaacaagtaattatttagggga-ccaaagttcaattaagccaatat 311  Q
    |||||||| ||||||||||||||||||||| |  ||||| |||||||| | ||||| |||||||||| ||||    
T  5613137 ttttacgaattatgggaccaaaatgaaaacgacaaattagttaggggatcaaaagtccaattaagcctatat 5613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 51 - 308
Target Start/End: Complemental strand, 26286666 - 26286408
Alignment:
Q  51 gataaaatacacctgcgtaatcaaatggtcctcttttaaaaaat-taatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||||| | ||||||| ||||||| || ||| |||||| |||||| |||||||||||||||||||||||||   |||||||||||   || |||    
T  26286666 gataaaatacacttacgtaatctaatggtcatccttttaaaaatataatcaaacggtttaaattaaaataattaatagagtctatggtggatcact-tta 26286568  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | | || ||||||||| |||||||| ||||||  |||| |  |||||  ||||||||||||||||||||    |||||||||| | ||| |||||||||     
T  26286567 aaggtgatccaccataaacatttggggttaaagttaacagccagggacctttttgactaacggagcaaacgttgagggaccaatatgttgattttacgaa 26286468  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaa 308  Q
    ||||||||||||||||||||| |  ||||| |||||||||| ||||| ||||||||||||    
T  26286467 ttatgggaccaaaatgaaaacgacaaattagttaggggaccaaaagtccaattaagccaa 26286408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 97 - 293
Target Start/End: Complemental strand, 12665998 - 12665803
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||||||||||| | |||||||| ||||||||||||||  || |||| | |||| ||||||| |||||||  ||||||  |||||||||||||    
T  12665998 atcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaa-gatggttcaccataaacatttgaggttaaagttaacggttaggga 12665900  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
      ||||||||||||| ||||||| |||||||||| ||| ||| ||||||||| ||||||||||||||| |||||   |||||| |||||||||||||    
T  12665899 cctttttgactaacgaagcaaaataagagggaccgaaatgttgattttacgaattatgggaccaaaataaaaactgataattacttaggggaccaaa 12665803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 7306066 - 7306359
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatt-aatc 99  Q
    ||||||||||||||| || ||||||||||  | || ||||||||||||| ||||||||| |  || |||||||| ||||||||||||||||||   ||||    
T  7306066 agaagatgaagaaaaagtacaaaaaattaagtattaatggtgcaccattggataaaatagaaatgtgtaatcaattggtcctcttttaaaaaaaacaatc 7306165  T
Q  100 agacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatat 199  Q
    | | || | ||||||||| |||||||| ||||||||||||||     ||     || || ||   ||| ||||  |||||||  |||| | || |||| |    
T  7306166 aaatggctaaaattaaaagaattaataagatctatggtggaccaacattgtttgtgttctacttgagatatttaaagttaaagttaacagctaaggatct 7306265  T
Q  200 ttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||||| ||| || ||||||    
T  7306266 ttttgactaacagaggaaaacaagagggaccaaaatgttaattttacgagttataggaccaaaatgaaaacaacaaattacttaaggaaccaaa 7306359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 50 - 307
Target Start/End: Complemental strand, 14478522 - 14478263
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||||||||||||  ||||  |||| ||||||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||   | ||    
T  14478522 agataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccattttt 14478423  T
Q  149 aacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttac 246  Q
    || || |||||||||||||||||| || ||||||  |||  |||| |||  ||||||||| ||||||||||| | ||| ||||||||| || | ||||||    
T  14478422 aaagtcggtccaccatagacatttgggggttaaagttaatagtta-ggacctttttgactgacggagcaaaacccaga-ggaccaaaatgtgagttttac 14478325  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcca 307  Q
     | |||||||| ||||||| |||||  ||||||||||| |||||||| || |||||||||||    
T  14478324 aatttatgggatcaaaatgtaaacacataattatttagaggaccaaatgtccaattaagcca 14478263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 306
Target Start/End: Complemental strand, 51445845 - 51445588
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||||||||||||| ||||  |||| | |  ||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||   | |||    
T  51445845 agataaaatacacctgcgtaatccaatgaccctcctgtttaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccattttta 51445746  T
Q  150 acgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttacg 247  Q
    | |||| |||||||||||||||| || ||||||  |||| |||| |||  ||||||||| || || ||||| ||||| ||||||||| || | ||||||     
T  51445745 aagttgatccaccatagacatttgggggttaaagttaacagtta-ggacctttttgactgacagatcaaaaccaaga-ggaccaaaatgtgagttttaca 51445648  T
Q  248 agttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
    | |||||||||||||||| ||||   ||||||||||| |||||||| || ||||||||||    
T  51445647 atttatgggaccaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagcc 51445588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 316
Target Start/End: Original strand, 48528910 - 48529025
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    ||||||||||||| |||| ||||||||| |||| ||| |||||||||||||||||||||||||| ||||||  ||||| || ||||||| ||||| ||||    
T  48528910 ttgactaacggagaaaaataagagggactaaaatgttgattttacgagttatgggaccaaaatgtaaacaacaaattacttgggggaccaaaagtccaat 48529009  T
Q  301 taagccaatatattat 316  Q
    |||||| || ||||||    
T  48529010 taagcccatttattat 48529025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 16964988 - 16965106
Alignment:
Q  52 ataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaac 151  Q
    |||||||| |||||||||||  |||||| ||||||||||| |  || || |||||| |||||||||||||||||| ||||||||||||||  || ||||     
T  16964988 ataaaatagacctgcgtaatacaatggttctcttttaaaagaaaaaacaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 16965087  T
Q  152 gttggtccaccatagacat 170  Q
    |||||||||||||| ||||    
T  16965088 gttggtccaccatatacat 16965106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 18821647 - 18821820
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||| || || ||| |||||||| ||||| |||| |||  || |||| ||| |||||||||||||||||| ||||||| |||||||||| |||    
T  18821647 atcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagacatttgaagttaaagataacggttatgga 18821746  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |   |||| ||||||| |||||    |||||||| ||||||| |||||||||||| || || ||||||||||||    
T  18821747 tcaatttggctaacggtgcaaacgttgagggaccgaaacgttgattttacgagttgtgagatcaaaatgaaaac 18821820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 12667288 - 12667375
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac 289  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| || | ||||||||||||||||   ||||||||||| ||||    
T  12667288 ttgactaacggagcaaaacaagagggaccgaaatgttaattttacgaattctaggaccaaaatgaaaactgataattatttagaggac 12667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 52078005 - 52078128
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||| | ||||||| |||||||||| |||  ||||  ||||| |||||| |||||||||||||||||| ||||||||||| |   || |||    
T  52078005 agataaaatacacttacgtaatctaatggtcctcctttttaaaaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactctta 52078104  T
Q  150 acgttggtccaccatagacatttg 173  Q
    | |||||| |||||||||||||||    
T  52078105 aggttggttcaccatagacatttg 52078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 308
Target Start/End: Complemental strand, 7304953 - 7304808
Alignment:
Q  164 tagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaa 263  Q
    |||||||||  |||||||  |||| | || |||| ||||| ||||| | ||||||| ||||||||||||||  || |||||||||||||||||| || ||    
T  7304953 tagacatttaaagttaaagttaacagctaaggatctttttaactaatgaagcaaaataagagggaccaaaatattgattttacgagttatgggatcacaa 7304854  T
Q  264 tgaaaacaagtaattatttaggggaccaa-agttcaattaagccaa 308  Q
    |||||||||  |||||||| ||| ||||| ||| ||||||||||||    
T  7304853 tgaaaacaacaaattatttcgggaaccaagagtccaattaagccaa 7304808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 26287797 - 26287902
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    ||||||||||||| ||||   |||||||||||| ||| ||||||||| |||||||||||||||||||||||  ||||| |||| ||||| ||||| ||||    
T  26287797 ttgactaacggagtaaaagttgagggaccaaaatgttgattttacgaattatgggaccaaaatgaaaacaacaaattagttagaggaccaaaagtccaat 26287896  T
Q  301 taagcc 306  Q
    ||||||    
T  26287897 taagcc 26287902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 13147333 - 13147401
Alignment:
Q  106 tttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttgg 174  Q
    ||||||||||||||||||||| ||||||||||||||  || |||| |||||||||||||||||||||||    
T  13147333 tttaaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacatttgg 13147401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 9226050 - 9226199
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataatta 123  Q
    ||||||||||| |||   |||| | |||||||||| || ||||| ||  |||||| ||||||||| |||  | |||| ||  ||||||||||||||||||    
T  9226050 aattagatgttaatgactcaccgtaagataaaatagacatgcgtgatttaatggttctcttttaataaaaaagatcaaacaatttaaattaaaataatta 9226149  T
Q  124 atatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    ||| ||||||||||||||  || |||| |||| |||||||||||||||||    
T  9226150 ataggatctatggtggaccacttttaaggttgatccaccatagacatttg 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 49801919 - 49801782
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    |||||||||||||||||   |||||||||||||||| |||| || | | |||||||||| |||||| | ||| |||||| | |||| | ||||  |||||    
T  49801919 agaagatgaagaaaatga--aaaaaattagatgttggtggtacatcgtaagataaaatagacctgcatgatccaatggttccctttaacaaaaa-aatca 49801823  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggac 141  Q
     |||||||||||||||||||||||||  || ||||||||||    
T  49801822 aacggtttaaattaaaataattaatagaatttatggtggac 49801782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 40533614 - 40533706
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    |||||||||||||||||||| | ||||||||||||| |||  |||||| | |||||| ||||||||| ||||   ||||||||||||||||||    
T  40533614 tttttgactaacggagcaaagcgagagggaccaaaatgttggttttacaatttatggaaccaaaatgtaaactgataattatttaggggacca 40533706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 28050427 - 28050333
Alignment:
Q  199 tttttgactaacggagcaaaa-caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||||||||||||||| |||| |||||||||| ||  ||||||| | |||||||||||||||| |||||  |||||||||| |||||||||    
T  28050427 tttttgactaacggagcaaaatcaag-gggaccaaaatgtggattttacaatttatgggaccaaaatgtaaacacataattatttaagggaccaaa 28050333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 270
Target Start/End: Complemental strand, 46467366 - 46467181
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaa 183  Q
    ||||| |||||  |||| |||||||||||||||| | ||||||  ||||| ||||||   || |||| |||||||||||||||||||||   ||||||      
T  46467366 ttttagaaaatatatcaaacggtttaaattaaaa-atttaataacatctacggtggatcacttttaatgttggtccaccatagacatttatggttaaact 46467268  T
Q  184 taacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |||| |  |||||| | |||||| |||||||  ||||  |||||||| |||| | | |||||  |||||||||||||||||||||||    
T  46467267 taacagcgagggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatgggaccaaaatgaaaac 46467181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 270
Target Start/End: Original strand, 3617417 - 3617578
Alignment:
Q  109 aaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgacta 208  Q
    |||||||||||||||||| ||||||| ||||||  || |||| |||||| |||||||||||||||  ||||||  |||| |  | |||  ||||||| ||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacatttgaggttaaagttaacagccaaggacttttttgaata 3617516  T
Q  209 acggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    ||||||||||    |||||||||||| | | |||||   | |||||||||||||| ||||||    
T  3617517 acggagcaaacgttgagggaccaaaatgatgatttttaaacttatgggaccaaaacgaaaac 3617578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 6049309 - 6049414
Alignment:
Q  74 aatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacattt 172  Q
    |||||||||||||||| |||  | ||||  |||||||||||||||||||||| | |||||| |||||||  || || |  ||||||||||||||||||||    
T  6049309 aatggtcctcttttaataaaaaatatcaatcggtttaaattaaaataattaacaggatctacggtggaccactatttagattggtccaccatagacattt 6049408  T
Q  173 ggagtt 178  Q
    ||||||    
T  6049409 ggagtt 6049414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 35943282 - 35943439
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggttt-aaattaaaataatta 123  Q
    ||||||||||| ||||| || | | |||||||||| |||||||||||  ||||||| || ||| |||||   |||| ||||||| ||| ||||| | |||    
T  35943282 aattagatgttaatggttcatcgtaagataaaatagacctgcgtaattcaatggtcatcctttcaaaaaaagatcaaacggttttaaaataaaaaattta 35943381  T
Q  124 atatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||| | |||||||||||   || |||| ||||||||||||||||||||| | ||||||    
T  35943382 ataaggtctatggtggatcactcttaaggttggtccaccatagacatttagggttaaa 35943439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 48096894 - 48097111
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||||||||  |||||| |||||||||| |  ||||||  | ||| ||| || | ||| |||||||||||| |||||||||| |||  || |||    
T  48096894 agataaaatacacctatgtaatccaatggtcctcgtaaaaaaaaaga-tcaaacgattaatatttaaataattaataggatctatggtagaccactctta 48096992  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | |||||||||||||| |||||||  ||||||  |||| | ||||||| | ||||||  ||||||  ||||   |||||| ||||| | | |||||  ||    
T  48096993 aggttggtccaccatatacatttgaggttaaacttaacag-tagggatttatttgaccgacggagacaaacctaagggactaaaacatgagttttattag 48097091  T
Q  250 ttatgggaccaaaatgaaaa 269  Q
    ||||||||||||||| ||||    
T  48097092 ttatgggaccaaaataaaaa 48097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 14479527 - 14479633
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaa 299  Q
    ||||||| | |||||||||| |  |||||||||| || | |||||| | |||||||||||||||| ||||   |||||||||||||||||||| || |||    
T  14479527 tttgactgatggagcaaaaccaaggggaccaaaatgtgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatgtccaa 14479626  T
Q  300 ttaagcc 306  Q
    |||||||    
T  14479627 ttaagcc 14479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 15232990 - 15232888
Alignment:
Q  68 taatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccataga 167  Q
    ||||| |||||| |||||||||||||   |||| |||||| | |||||||||||||||| |||||||| |||||  || |||| |||||||||| ||| |    
T  15232990 taatccaatggttctcttttaaaaaaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatata 15232891  T
Q  168 cat 170  Q
    |||    
T  15232890 cat 15232888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 45584906 - 45584988
Alignment:
Q  88 aaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||| ||||| ||| |||| |||||||||||||||| |||||||||||||   || |||| ||||| |||||||||||||    
T  45584906 aaaaaataaatcaaacgatttatattaaaataattaataggatctatggtggagcactcttaaagttgggccaccatagacat 45584988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 44999321 - 44999445
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaa--tcagacggtttaaattaaaataattaatatgatctatggtggactgctgt 147  Q
    ||||| |||| || ||||||||| ||||||| |||||| |||||  ||  ||| | ||||||| ||||||||||||||| ||||||||||| ||  || |    
T  44999321 agatataatagacttgcgtaatccaatggtcatcttttgaaaaaacaagatcaaatggtttaagttaaaataattaataagatctatggtgaaccactct 44999420  T
Q  148 taacgttggtccaccatagacattt 172  Q
    ||   ||||||||||||||||||||    
T  44999421 tacgattggtccaccatagacattt 44999445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 5611808 - 5611722
Alignment:
Q  223 gagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaa 308  Q
    |||| ||||||| ||| ||||||| | |||||||||||||||||||||||  ||||| |||  ||||| ||||| ||||||||||||    
T  5611808 gaggcaccaaaatgttgattttacaaattatgggaccaaaatgaaaacaacaaattagttaaaggaccaaaagtccaattaagccaa 5611722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 28051619 - 28051704
Alignment:
Q  201 tttgactaacggagcaaaa-caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggg 286  Q
    ||||||||||||||||||| |||| |||||||||| || | |||||| | |||||||||||||||| ||||   |||||||||||||    
T  28051619 tttgactaacggagcaaaatcaag-gggaccaaaatgtgagttttacaatttatgggaccaaaatgtaaactcataattatttaggg 28051704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 15746697 - 15746758
Alignment:
Q  120 attaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||||||| ||||||||||||||  || ||||  ||||||||||||||||||||| |||||||    
T  15746697 attaataggatctatggtggaccactcttaagattggtccaccatagacatttgaagttaaa 15746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 13894869 - 13894781
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcct-cttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggt 137  Q
    ||||||||||||| ||||||||  ||||||  | | |||||||||   |||| ||||||||||||||||||||||| | ||||||||||    
T  13894869 agataaaatacacatgcgtaattcaatggtttttcatttaaaaaaaagatcaaacggtttaaattaaaataattaacaggatctatggt 13894781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 46318450 - 46318570
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataa 120  Q
    ||||| |||| ||||| |||| || ||| |||||||||| || ||  ||||| |||||| || ||  ||||||   |||| ||| ||||||||||||||     
T  46318450 aaaaagttaggtgttgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaagatcaaacgatttaaattaaaatat 46318549  T
Q  121 ttaatatgatctatggtggac 141  Q
    |||||| ||||||||||||||    
T  46318550 ttaataggatctatggtggac 46318570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 3616752 - 3616795
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaa 93  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  3616752 agataaaatacacttgcgtaatctaatggtcctcctttaaaaaa 3616795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 48492786 - 48492724
Alignment:
Q  248 agttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagccaat 309  Q
    |||||||||||||||||||||||||  ||| | |||| |||||||| ||| ||||||||||||    
T  48492786 agttatgggaccaaaatgaaaacaacaaataagttagaggaccaaaggtttaattaagccaat 48492724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 182
Target Start/End: Complemental strand, 48492882 - 48492852
Alignment:
Q  152 gttggtccaccatagacatttggagttaaaa 182  Q
    |||||||||||||||||||||||||||||||    
T  48492882 gttggtccaccatagacatttggagttaaaa 48492852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 49802854 - 49802999
Alignment:
Q  147 ttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttac 246  Q
    |||| |||||| |||||||||||||| ||||| ||  |||| ||  ||||| | |||| | ||||||| |||| | ||||||| ||||||| | |||||     
T  49802854 ttaaggttggtacaccatagacatttagagttgaagttaaccgtc-gggatttatttggcaaacggagaaaaagatgagggactaaaacgtcatttttat 49802952  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
     | || ||||||||||||||||||| | |||||  || |||||||||    
T  49802953 taattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 49802999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 24499689 - 24499758
Alignment:
Q  223 gagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaa 292  Q
    ||||||||||||||| | |||||  | || || |||||||||||||||  | ||||||||||||||||||    
T  24499689 gagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaa 24499758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 9482646 - 9482586
Alignment:
Q  114 aaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttgg 174  Q
    ||||||||||||| ||||||||||| ||  || |||| ||||||||||  |||||||||||    
T  9482646 aaaataattaataagatctatggtgaaccactcttaaagttggtccactgtagacatttgg 9482586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 9485221 - 9485285
Alignment:
Q  106 tttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||||||||||||||||| ||| ||||||  ||  || |||| |||| ||||||||||||||    
T  9485221 tttaaattaaaataattaataggatttatggttaaccactcttaaagttgatccaccatagacat 9485285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 27814495 - 27814415
Alignment:
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaa 182  Q
    |||||| ||||||| | |||||||| | | || | |||||  || |||| ||||||||||||||||||||| |||||||||    
T  27814495 acggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacatttagagttaaaa 27814415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 41872779 - 41872707
Alignment:
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttgg 174  Q
    |||||||||||||||| | |||||| | ||||||||| |||  | ||||  ||||| ||||||||||||||||    
T  41872779 acggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacatttgg 41872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 41873879 - 41873955
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    |||| |||||| ||||| ||| |||||||    ||||||||||||  || |||| ||||||||||||||||||||||    
T  41873879 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagacatttg 41873955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 46110489 - 46110405
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    |||| |||||| ||||||| | |||||||| | |||| | |||||  || |||| |||||||||||||||| |||| ||||||||    
T  46110489 atcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccatagatatttagagttaaa 46110405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 6e-47; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 50 - 293
Target Start/End: Original strand, 31845656 - 31845898
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||||| ||||||| ||||||| || |||||||||   |||| || ||||| |||||||||||||||| || |||||||||||  || |||    
T  31845656 agataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccactctta 31845755  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | |||||| |||||||||||||||| ||||||  |||| ||||||||  ||||||| ||||||||||||    |||||||||||| ||| |||||| |||    
T  31845756 a-gttggttcaccatagacatttggggttaaagttaaccgttagggacctttttgattaacggagcaaacgttgagggaccaaaatgttgattttatgag 31845854  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||||||||||||||  | ||| ||| |||||||||    
T  31845855 ttatgggaccaaaatgaaaacaacaatttacttaagggaccaaa 31845898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 305
Target Start/End: Complemental strand, 43202362 - 43202095
Alignment:
Q  43 caccattagataaaatacacctgcgtaatcaaatggtcct-cttttaaaaaattaa---tcagacggtttaaattaaaataattaatatgatctatggtg 138  Q
    |||||| ||||| ||||||||||| ||||| ||||||| | |||||||||||  ||   ||| || ||||||||| |||||| ||||| |||||||||||    
T  43202362 caccataagatagaatacacctgcataatccaatggtcattcttttaaaaaaaaaaaaatcaaacagtttaaatttaaataactaataggatctatggtg 43202263  T
Q  139 gactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgtt 238  Q
    |||  || |||| |||| ||||| ||||| |||||| ||||||| ||||||| |||||  |||||||||||||| |||||    |||||||||||| |||    
T  43202262 gaccactcttaaggttgatccactatagatatttggggttaaaattaacggtcagggacctttttgactaacggtgcaaacgttgagggaccaaaatgtt 43202163  T
Q  239 aattttacgagttatgggaccaaaatgaaaacaagtaattatttagggga-ccaaagttcaattaagc 305  Q
     ||||||||||||||||||| |||||||||||||  ||||| |||||||| | ||||| |||||||||    
T  43202162 gattttacgagttatgggactaaaatgaaaacaacaaattacttaggggatcaaaagtccaattaagc 43202095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 22620191 - 22620019
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaa---aaaattaa 97  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||   ||||  ||    
T  22620191 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaaaaaaa 22620092  T
Q  98 tcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||| ||||||||||| ||||| |||||||||||||||  ||||| ||| |||| ||| || |||| |||||||    
T  22620091 tcaaacggtttaaataaaaatgattaatatgatctataatggacagctcttaaagttagttcaccttagacat 22620019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 306
Target Start/End: Original strand, 9854739 - 9854997
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcct-cttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||| |||| ||||||||| ||||  ||| |||||||||||  ||||| | ||||||||||| || |||||||| ||||||||||||||  || ||    
T  9854739 agataaaacacacatgcgtaatccaatgacccttcttttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggaccactctt 9854838  T
Q  149 aacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttac 246  Q
    || ||||||||||||||||||||| || ||||||  ||||||| | |||  ||||||||| ||||||||||| ||||| ||||||||| ||  |||||||    
T  9854839 aaagttggtccaccatagacatttgggggttaaagttaacggtca-ggacctttttgactgacggagcaaaatcaaga-ggaccaaaatgtggattttac 9854936  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
     | |||||||||||||||| |||||  ||||||||||| |||||||| || ||||||||||    
T  9854937 aatttatgggaccaaaatgtaaacacataattatttagaggaccaaatgtccaattaagcc 9854997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 270
Target Start/End: Original strand, 24192525 - 24192744
Alignment:
Q  52 ataaaatacacctgcgtaatcaaatggtcctcttttaa-aaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaa 150  Q
    |||||||| || ||||||||| |||||| ||||||||| ||||  ||||| ||||||| ||||||||||||||||| ||||||||||||||  || ||||    
T  24192525 ataaaatagacatgcgtaatctaatggttctcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaa 24192624  T
Q  151 cgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagt 250  Q
     ||||||||||||||||||||| | ||||||  |||| || | |||  ||||||| |||||||| ||||   ||| |||||||| | | |||||| ||||    
T  24192625 ggttggtccaccatagacatttagggttaaagttaacagtcaaggacctttttgattaacggagtaaaagttgagagaccaaaatgatgattttaagagt 24192724  T
Q  251 tatgggaccaaaatgaaaac 270  Q
    ||||||||||||| ||||||    
T  24192725 tatgggaccaaaacgaaaac 24192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 270
Target Start/End: Original strand, 20180534 - 20180755
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||| || || |||||| |||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| ||||||||||||||  || ||    
T  20180534 agataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtggaccactctt 20180633  T
Q  149 aacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacga 248  Q
    || ||| |||||| |||||||||| | ||||||  |||  || | |||  ||||||| |||||||||||||   |||||||||||| | |||||||| ||    
T  20180634 aatgttagtccactatagacatttagggttaaagttaatagtcatggacctttttgaataacggagcaaaagtcgagggaccaaaatgataattttaaga 20180733  T
Q  249 gttatgggaccaaaatgaaaac 270  Q
    |||||| |||||||||||||||    
T  20180734 gttatgagaccaaaatgaaaac 20180755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 285
Target Start/End: Complemental strand, 17455302 - 17455067
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||| |||||||||||| |||||||||||||||||||||  || | |||||| |||||||||||||||||| ||||||||||||||  || |||    
T  17455302 agataaaatagacctgcgtaatctaatggtcctcttttaaaaaatagataaaacggttcaaattaaaataattaataagatctatggtggaccactttta 17455203  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    |  |||||| | |||||| ||||| |||||||  ||||    | |||| | ||||| | | ||||  |||||  ||||||||||| ||| ||||||| |     
T  17455202 agattggtctagcatagatatttgaagttaaagttaacataaaaggatttatttgaatgaaggagacaaacataagggaccaaaaagttgattttacaaa 17455103  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttagg 285  Q
    ||||| |||||||||||||||||  ||||| |||||    
T  17455102 ttatgtgaccaaaatgaaaacaaaaaattagttagg 17455067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 78 - 270
Target Start/End: Original strand, 10669333 - 10669526
Alignment:
Q  78 gtcctcttttaaaaaa-ttaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggag 176  Q
    |||||||||||||||| || ||||  ||||||||||||||||| |||||| ||||||||||||||  || |||| |||||| |||||||||||||||  |    
T  10669333 gtcctcttttaaaaaaatttatcaatcggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacatttgagg 10669432  T
Q  177 ttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |||||  |||| |  | |||  ||||||| ||||||||||||    |||| ||||||| ||| |||||| || |||||||||||||||||||||    
T  10669433 ttaaagttaacagccaaggacttttttgaataacggagcaaacgttgaggtaccaaaatgttgattttaagatttatgggaccaaaatgaaaac 10669526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 31844471 - 31844365
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaatta-tttaggggaccaaagttcaat 300  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||  ||||| |||||||  | ||||| ||||    
T  31844471 ttgactaacggagcaaaacaagagggaccaaaatgttaattttacgagttacgggactaaaatgaaaacaacaaattactttagggaccaaaagtccaat 31844372  T
Q  301 taagcca 307  Q
    |||||||    
T  31844371 taagcca 31844365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 42793805 - 42793717
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttagggg 287  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||  ||||  |||||||||||||||    
T  42793805 tttttgactaacggagcaaaacaagagggaccaaaatgttaattttacaatttatgggaccaaaatataaactggtaattatttagggg 42793717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 199 - 311
Target Start/End: Complemental strand, 38697974 - 38697861
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttc 297  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||| ||| |   ||||| |||||||||| |||| ||    
T  38697974 tttttgactaacggagcaaaacaagagggaccaaaatgttgattttacaagttatggaaccaaaatgtaaatagaaaattacttaggggaccaaaagatc 38697875  T
Q  298 aattaagccaatat 311  Q
    ||||||||| ||||    
T  38697874 aattaagcctatat 38697861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 28291398 - 28291307
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||| ||||||| |||||||||| ||| ||| ||||||||| |||||||||||||||||||||   |||||| |||||||||||||    
T  28291398 ttgactaacgaagcaaaataagagggaccgaaatgttgattttacgaattatgggaccaaaatgaaaactgataattacttaggggaccaaa 28291307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 32695088 - 32695254
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    ||||||||||||||| |   |||||||||| ||||| ||||  | | | |||||||||| || ||  ||||| |||||| |||||||||||||  |||||    
T  32695088 agaagatgaagaaaagga--aaaaaattaggtgttggtggtatatcgtaagataaaatagacttgtctaatccaatggttctcttttaaaaaaa-aatca 32695184  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     ||||||||||||||||||||||||| ||||||||||||||   | ||||  ||||| ||||||||||||    
T  32695185 aacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacat 32695254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 32798391 - 32798512
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||||| || |||| |  ||||||| ||||||| ||   |||| ||||||||||||||||||||||||| ||||||||||||||  || ||    
T  32798391 agataaaatacacctacgcaatccagcggtcctccttttaaagaaaagatcaaacggtttaaattaaaataattaataggatctatggtggaccactctt 32798490  T
Q  149 aacgttggtccaccatagacat 170  Q
    || |||| ||||||||||||||    
T  32798491 aaggttgatccaccatagacat 32798512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 43203293 - 43203398
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    |||||| ||||||||||| |||||||||  ||| ||| |||||||||||||||||||||||||||||| ||  |||||||||  ||||| ||||| ||||    
T  43203293 ttgactgacggagcaaaataagagggacggaaatgttgattttacgagttatgggaccaaaatgaaaataacaaattatttaatggaccaaaagtccaat 43203392  T
Q  301 taagcc 306  Q
    ||||||    
T  43203393 taagcc 43203398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 28291396 - 28291486
Alignment:
Q  220 caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac-caaagttcaattaagccaat 309  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| |||||||   ||||||||||||||||  ||| | |||||||||||||    
T  28291396 caagagggaccgaaatgttaattttacgagttatgggaccaaagtgaaaactgataattatttaggggactaaaaatccaattaagccaat 28291486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 24306162 - 24306229
Alignment:
Q  226 ggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||  || |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  24306162 ggaccaaaatattgattttacgagttatgggaccaaaatgaaaacaagaaattacttagggaaccaaa 24306229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 270
Target Start/End: Complemental strand, 42877808 - 42877654
Alignment:
Q  115 aaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggag 214  Q
    |||||||||||| ||||||||||||||   | |||| |||||||||||||| |||||||| ||||||  |||| | | ||||| | ||||||| ||| ||    
T  42877808 aaataattaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccg-tcgggatttatttgactgacgaag 42877710  T
Q  215 caaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
      ||||  ||||||||||||| | | |||||  ||||||| |||||||||||||||    
T  42877709 acaaacgtgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaac 42877654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 293
Target Start/End: Complemental strand, 38696509 - 38696320
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatattttt 203  Q
    |||| |||||| || |||||||  ||||||||||||||  || |||| ||||||| ||||||||||||| | ||||||  |||  |  |||||| | |||    
T  38696509 ggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacatttagggttaaacttaatagcaagggatttattt 38696410  T
Q  204 gactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||  ||||||  ||||  ||||||||||||| | | |||||  ||||||| |||||||||||||||    ||||| |||||||||||||    
T  38696409 gaccgacggaggcaaacttgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttaaaattaattaggggaccaaa 38696320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 42098773 - 42098699
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||| |||||| |||||||| ||||||||| ||||||||||||||  || |||| |||||||||||| ||||||    
T  42098773 aatcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacat 42098699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 13117511 - 13117604
Alignment:
Q  68 taatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccac 161  Q
    ||||| |||||| |||||||||||||   |||| |||||| | |||||||||||||||| |||||||| |||||  || |||| ||||||||||    
T  13117511 taatccaatggttctcttttaaaaaaaacatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccac 13117604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 181
Target Start/End: Complemental strand, 6398038 - 6397906
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||  || ||||||||||| || || |||| |||||   |||| | |||||||||||||| |||||||| | ||||||||||||  ||||     
T  6398038 agataaaatacatttgtgtaatcaaatgatcatcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccactgta 6397939  T
Q  149 aacgttggtccaccatagacatttggagttaaa 181  Q
    || ||||||  |||||||  |||||||||||||    
T  6397938 aaggttggtttaccatagttatttggagttaaa 6397906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 14840807 - 14840883
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    |||| |||||||||||||||| | |||||| || ||||||||||   || |||| ||||||||||||||||||||||    
T  14840807 atcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccatagacatttg 14840883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 24305133 - 24305070
Alignment:
Q  225 gggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttagggga 288  Q
    |||||||||| ||| ||||||| |||||| | ||||||||||||||||| ||||| ||||||||    
T  24305133 gggaccaaaatgttgattttactagttatagaaccaaaatgaaaacaaggaattacttagggga 24305070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 45437380 - 45437586
Alignment:
Q  86 ttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaata 185  Q
    ||||||||||| ||| | |||| ||||| ||| |||||||| | | ||||||| ||||    ||| ||||| || ||||| | |||||| ||||||  ||    
T  45437380 ttaaaaaatta-tcaaagggttaaaattgaaaaaattaataaggtatatggtgcactgtctataatgttggcccgccataaatatttggggttaaactta 45437478  T
Q  186 acggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttagg 285  Q
    || || |||||| | |||||||| |||||  ||||| ||||||||||||| | | |||||  | |||||||| ||||||||||||  | ||||| |||||    
T  45437479 acagtcagggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaaacttgaaattaattagg 45437578  T
Q  286 ggaccaaa 293  Q
    ||| ||||    
T  45437579 ggatcaaa 45437586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 28420148 - 28420277
Alignment:
Q  163 atagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaa 262  Q
    |||||||||| ||||||||  |||| ||| | ||| | |||||| ||||||| |||| | ||||||| |||||||   |||||  | |||||||||||||    
T  28420148 atagacatttagagttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaa 28420247  T
Q  263 atgaaaacaagtaattatttaggggaccaa 292  Q
    |||||||   | ||||||||| ||||||||    
T  28420248 atgaaaaattgaaattatttaagggaccaa 28420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 270
Target Start/End: Original strand, 42362671 - 42362831
Alignment:
Q  109 aaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgacta 208  Q
    ||||||||| |||||||| |||||||| || ||  || |||| ||||||||||||||||||| |||| |||||  |||| ||    ||  ||||||| ||    
T  42362671 aaattaaaa-aattaataggatctatgatgaaccactcttaatgttggtccaccatagacatctggaattaaagttaacagtcgttgacctttttgaata 42362769  T
Q  209 acggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |||||||||||   ||| |||||||   || ||||| |||||||| | ||||||||||||||    
T  42362770 acggagcaaaagttgagtgaccaaagtattgatttttcgagttatagaaccaaaatgaaaac 42362831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 7844793 - 7844725
Alignment:
Q  223 gagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    |||||||||||| | | |||||| || |||||||||||||||||||||  ||||||| ||| |||||||    
T  7844793 gagggaccaaaatgatgattttaagacttatgggaccaaaatgaaaactggtaattagttaagggacca 7844725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 35799557 - 35799477
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaatta 279  Q
    ||||||| |||||||||||||   |||||||||||| | |||||||| || ||||  |||||||||||||||  |||||||    
T  35799557 tttttgaataacggagcaaaagttgagggaccaaaatgataattttaagacttataagaccaaaatgaaaacttgtaatta 35799477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 30786885 - 30786799
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaa 183  Q
    |||| |||||| ||||||| | |||||||| | | |||| |||||  || |||| |||| |||||||||||||||| ||||||||||    
T  30786885 atcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacatttagagttaaaaa 30786799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 40437458 - 40437565
Alignment:
Q  53 taaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaa---tcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||| || ||||| ||| |||| || |||||||||||| |||   ||| || |||||||||||||||||||||| |||||| |||||||  || |||    
T  40437458 taaaatagacatgcgtgatctaatg-tcatcttttaaaaaaataaatatcaaacagtttaaattaaaataattaataggatctacggtggaccactttta 40437556  T
Q  150 acgttggtc 158  Q
    | |||||||    
T  40437557 aggttggtc 40437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 42871071 - 42870950
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||| ||||||||  ||||||| || |||||||| |   |||| ||||||||||||| || | |||||| | |||| |||||||  || ||    
T  42871071 agataaaatacacatgcgtaattcaatggtcatccttttaaaacacagatcaaacggtttaaattacaaaatttaataaggtctacggtggaccactctt 42870972  T
Q  149 aacgttggtccaccatagacat 170  Q
    ||  ||||||||| ||||||||    
T  42870971 aagattggtccacaatagacat 42870950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 42878875 - 42878920
Alignment:
Q  248 agttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||    
T  42878875 agttatgggaccaaaatgaaaacttgaaattaattaggggaccaaa 42878920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 45281096 - 45281169
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||| ||||||||||||||||  ||||||| ||| |||||| |||  || |||| ||||||||||| |||||||    
T  45281096 atcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtagacat 45281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 8571532 - 8571608
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    |||||||||||||   |||||| | | ||||||||||   | |||| ||||||||||||||||||||||| ||||||    
T  8571532 gtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccatagacatttggggttaaa 8571608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 37400988 - 37400944
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggac 141  Q
    |||| |||||||| ||||||| |||||||| ||||||||||||||    
T  37400988 atcaaacggtttatattaaaaaaattaataggatctatggtggac 37400944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 41349339 - 41349511
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttt-aaaaaattaatc 99  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||| |||||| |||||    
T  41349339 agaagatgaagaaaatgtacaaaaaattaggtgttgatagtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaataatc 41349438  T
Q  100 agacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacattt 172  Q
    | ||||||||||| ||||| ||||||||||||||| ||||||  || |||| ||| || |||| |||||||||    
T  41349439 aaacggtttaaataaaaatgattaatatgatctatagtggacatctcttaaagttagttcaccttagacattt 41349511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 1520091 - 1519797
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaat-taatcagacggtttaaattaaaataatta 123  Q
    |||||| ||||| || | |||| | ||||||||||||| | ||||||| ||||||| || ||| |||||| |||||| ||||||||||||||||||||||    
T  1520091 aattaggtgttgttgattcaccgtaagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatcaaacggtttaaattaaaataatta 1519992  T
Q  124 atatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaag 223  Q
    ||| |||||||||||||   || |||| | || || |||||| |||||||| ||||||  |||| || ||| |  |||||||||||| |||||||    |    
T  1519991 ataggatctatggtggatcact-ttaaaggtgatctaccataaacatttggggttaaagttaacagtcaggtacctttttgactaacagagcaaatgttg 1519893  T
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaatatattatta 318  Q
    ||||||||| | ||| ||||||||| ||||||||||||||||||||| |  ||||| |||||||||| ||||| |||||||||||| | |||||||    
T  1519892 agggaccaatatgttgattttacgaattatgggaccaaaatgaaaacgacaaattagttaggggaccaaaagtccaattaagccaaaaaattatta 1519797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 50 - 308
Target Start/End: Complemental strand, 26630045 - 26629787
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||||| ||||||| ||||||| || |||||||||   |||| || ||||| |||||||||||||||| || |||||||||||  || |||    
T  26630045 agataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccactctta 26629946  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | |||||| ||||||| |||||||| ||||||  |||| || | |||  ||||||| ||||||||||||    |||||||||||| ||| |||||| |||    
T  26629945 a-gttggttcaccataaacatttggggttaaagttaaccgtcatggacctttttgattaacggagcaaacgttgagggaccaaaatgttgattttatgag 26629847  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaa 308  Q
    |||||||||||||||||||||||  | ||| ||| |||||| ||||| ||||||||||||    
T  26629846 ttatgggaccaaaatgaaaacaacaatttacttaagggaccaaaagtccaattaagccaa 26629787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 44498717 - 44498495
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaa-aaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||| || ||||||||| ||||||| |||||||| ||||  ||||| ||||||| ||||||||||||||||| ||||||||||||||  || ||    
T  44498717 agataaaatagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactctt 44498618  T
Q  149 aacgttggtccaccatagacatttggagttaaaaataacggttaggga-tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacg 247  Q
    || |||| ||||||||||||||||  |||||||  |||| || |  || | ||||||| |||| ||||||||   |||||||||||| | | |||||| |    
T  44498617 aaggttgatccaccatagacatttaaagttaaagttaaccgtcaatgactttttttgaataacagagcaaaagttgagggaccaaaatgatgattttaag 44498518  T
Q  248 agttatgggaccaaaatgaaaac 270  Q
    |||||||||||||||| ||||||    
T  44498517 agttatgggaccaaaacgaaaac 44498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 50 - 306
Target Start/End: Original strand, 26496170 - 26496427
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||||| ||| |||||| ||||  |||| |||||||||| | |||| ||||||||||||| ||||||||||| ||||||||||||||   | ||    
T  26496170 agataaaatacatctgtgtaatccaatgaccctcattttaaaaaaat-atcaaacggtttaaattagaataattaataggatctatggtggaccattttt 26496268  T
Q  149 aacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaac-aagagggaccaaaacgttaattttac 246  Q
    || || |||||||||||||||||| || ||||||  |||| |||| |||  ||||||||| |||||||||| | |||| ||||||||| || | ||||||    
T  26496269 aaagtcggtccaccatagacatttgggggttaaagttaacagtta-ggacctttttgactgacggagcaaacctaaga-ggaccaaaatgtgagttttac 26496366  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
     | |||||||||||||||| |||||  |||||| |||| |||||||| || ||||||||||    
T  26496367 aatttatgggaccaaaatgtaaacacataattagttagaggaccaaatgtccaattaagcc 26496427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 50 - 272
Target Start/End: Complemental strand, 36845665 - 36845442
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||   |||| || ||||| |||||||||||||||| || |||||||||||  || |||    
T  36845665 agataaaatacacctgcgtaatccaatggtcatcttttaaaaaaaatatcaaacagtttacattaaaataattaataggacctatggtggaccactctta 36845566  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacg-ttaattttacga 248  Q
    | ||||||| | |||| |||||| | ||||||  | || || |||||  | ||||| ||||||||||||    |||| ||||||| | || |||||| ||    
T  36845565 atgttggtctatcataaacatttagggttaaagttgaccgtcagggacctctttgattaacggagcaaacgttgaggaaccaaaatgtttgattttatga 36845466  T
Q  249 gttatgggaccaaaatgaaaacaa 272  Q
    ||||||| || |||||||||||||    
T  36845465 gttatggaactaaaatgaaaacaa 36845442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 36846572 - 36846663
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||||| ||||||| |||||    
T  36846572 ttgacgaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaatgaaaacaacaaattacttagggggccaaa 36846663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 56085620 - 56085471
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatc 131  Q
    |||||||||| |||  | ||||||||||||| || || ||| || |||| || ||| |||||  ||||| ||||||||||||||||||||||||| ||||    
T  56085620 tgttgatggttcactgtaagataaaatacacatgtgtgatccaacggtcatccttttaaaaaaaaatcaaacggtttaaattaaaataattaataggatc 56085521  T
Q  132 tatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||||||||||  || |||| ||| ||||||||||||||||||| ||||||    
T  56085520 tatggtggaccactcttaaggttagtccaccatagacatttggggttaaa 56085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 35348900 - 35348793
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    |||||| ||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||  ||||| ||| |||||| ||||| ||||    
T  35348900 ttgactgacgaagcaaaacaagagggactaaaacgttgattttacaagttatgggaccaaaatgaaaacaacaaattacttaagggaccaaaagtccaat 35348801  T
Q  301 taagccaa 308  Q
    ||||||||    
T  35348800 taagccaa 35348793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 7707863 - 7707725
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatc 131  Q
    |||||||||| || | | |||||||||| |||||| ||||| |||||| |||||||||| ||  ||||| |||||| |||||||||||||||||| ||||    
T  7707863 tgttgatggtacatcgtaagataaaatagacctgcctaatccaatggttctcttttaaagaaaaaatcaaacggttgaaattaaaataattaataggatc 7707764  T
Q  132 tatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||||||  || |||| ||||||| |||| ||||||    
T  7707763 tatggtggaccactcttaaggttggtctaccaaagacat 7707725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 39056528 - 39056422
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| | ||||| |||||||||||||||||  ||||| ||| |||||| ||||| ||||    
T  39056528 ttgactaacggagcaaaacaagagggactaaaacgttgattttacaaattatgagaccaaaatgaaaacaacaaattacttaagggaccaaaagtccaat 39056429  T
Q  301 taagcca 307  Q
    |||||||    
T  39056428 taagcca 39056422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 2312313 - 2312461
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataa 120  Q
    |||||||||| ||||| |||| || ||| ||||||||||  ||||  ||||| |||||| ||||||| |||||  ||||| || ||||||||||||||||    
T  2312313 aaaaaattaggtgttggtggtacatcataagataaaataggcctgtctaatccaatggttctctttttaaaaaa-aatcaaacagtttaaattaaaataa 2312411  T
Q  121 ttaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||||| ||||||||||||||  || ||||  ||||||||||||||||||    
T  2312412 ttaataggatctatggtggaccacttttaagattggtccaccatagacat 2312461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 26631232 - 26631337
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||| ||  ||||| || ||||||| ||||| ||||    
T  26631232 ttgactaacggagcaaaacaagaggaaccaaaatgttgattttacgagttatgagaccaaaatgaaaataacaaattacttgggggaccaaaagtccaat 26631331  T
Q  301 taagcc 306  Q
    ||||||    
T  26631332 taagcc 26631337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 13165751 - 13165530
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatgg-tcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||||| |||||||||| ||||  |  ||||||||||||   |||| ||||||||||||||||||||||||    ||||||||||||  || ||    
T  13165751 agataaaatacatctgcgtaatccaatgactattcttttaaaaaaaagatcaaacggtttaaattaaaataattaatgaagtctatggtggaccactctt 13165652  T
Q  149 aacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacga 248  Q
    || |||||||||||||||| ||||| |||||||  |||| || | |||| | |||||| ||||||| |||| | || |||| ||||||  | |||||  |    
T  13165651 aaggttggtccaccatagaaatttgaagttaaacttaacagtcaaggatttatttgacaaacggaggaaaagatgaaggacgaaaacgccatttttatta 13165552  T
Q  249 gttatgggaccaaaatgaaaaca 271  Q
     ||| ||||||||||||||||||    
T  13165551 atta-gggaccaaaatgaaaaca 13165530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 35350143 - 35350226
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||  ||||| |||||||||| ||||| ||||||||||    
T  35350143 agggaccaaaacgttaattttacgagttatgagatcaaaatgaaaacaacaaattacttaggggaccaaaagtccaattaagcc 35350226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 27850844 - 27850918
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||  || |||| |||||||||||||||||||    
T  27850844 aatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27850918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 269
Target Start/End: Complemental strand, 40723480 - 40723264
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||||||| |||||||| |||||||||| |  ||||||   |||| ||| || | ||| |||||||||||| |||||||||| |||  || |||    
T  40723480 agataaaatacaccagcgtaatccaatggtcctcgtaaaaaaaag--atcaaacgattaacatttaaataattaataggatctatggtagaccactctta 40723383  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | |||||||||||||| |||||||  ||||||  |||| | || |||| | ||||||  ||||||  ||||   |||||||||||| | | |||||  ||    
T  40723382 aggttggtccaccatatacatttgaggttaaacttaacag-tatggatttatttgaccgacggagataaacctaagggaccaaaacatgagttttattag 40723284  T
Q  250 ttatgggaccaaaatgaaaa 269  Q
    ||||||||||||||||||||    
T  40723283 ttatgggaccaaaatgaaaa 40723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 4871695 - 4871581
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg-gagttaaaaataacggttagggatatttt 202  Q
    ||||||||||||||||||||||| |||||| |||||||  || || | |||||||||||||||||||||| | ||||||  ||||||| | |||| ||||    
T  4871695 ggtttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacatttgagggttaaagttaacggtca-ggatctttt 4871597  T
Q  203 tgactaacggagcaaa 218  Q
    ||| ||||||||||||    
T  4871596 tgaataacggagcaaa 4871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 39057802 - 39057885
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||  ||||| |||||||||| ||||| ||||||||||    
T  39057802 agggaccaaaacgttaattttacgagttataggacaaaaataaaaacaacaaattacttaggggaccaaaagtccaattaagcc 39057885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 8363401 - 8363507
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaa 299  Q
    |||||||||||||||||||| | ||||||||||| || | |||||| | |||| ||||||||||| ||||   |||||||||||||||||||| || |||    
T  8363401 tttgactaacggagcaaaaccaaagggaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtccaa 8363500  T
Q  300 ttaagcc 306  Q
    |||||||    
T  8363501 ttaagcc 8363507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 1521207 - 1521312
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    ||||||||||||| ||||   |||||||||||| ||| ||||||||| |||||||| ||||||||||||||  ||||| |||| ||||| ||||| ||||    
T  1521207 ttgactaacggagtaaaagttgagggaccaaaatgttgattttacgaattatgggatcaaaatgaaaacaacaaattagttagaggaccaaaagtccaat 1521306  T
Q  301 taagcc 306  Q
    ||||||    
T  1521307 taagcc 1521312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 19750136 - 19750277
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgat 130  Q
    |||||||||| || | | ||||| ||||||||||||| ||| ||   ||||| ||||||||||   |||| ||| ||||||||||||||||||||| |||    
T  19750136 tgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaataggat 19750235  T
Q  131 ctatggtggactgctgttaacgttggtccaccatagacattt 172  Q
    |||||||||||  || ||||  || |||||||||||||||||    
T  19750236 ctatggtggacaacttttaagatttgtccaccatagacattt 19750277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 19789670 - 19789529
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgat 130  Q
    |||||||||| || | | ||||| ||||||||||||| ||| ||   ||||| ||||||||||   |||| ||| ||||||||||||||||||||| |||    
T  19789670 tgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaataggat 19789571  T
Q  131 ctatggtggactgctgttaacgttggtccaccatagacattt 172  Q
    |||||||||||  || ||||  || |||||||||||||||||    
T  19789570 ctatggtggacaacttttaagatttgtccaccatagacattt 19789529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 1794634 - 1794548
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||||||||||| |||| |||||||||||||||| | |||||| | ||||||||||||  || |||| |||||||||||||| ||||    
T  1794634 ttttaaaaaattgatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacat 1794548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 52240087 - 52240013
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||  || |||| |||||||||||||||||||    
T  52240087 aatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacat 52240013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 26425784 - 26425869
Alignment:
Q  208 aacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||||||||| ||||||||  || |||||||||||||| | ||||||||||||||    ||||| |||||||||||||    
T  26425784 aacggagcaaaacaagagagaccaaaatattgattttacgagttattgtaccaaaatgaaaactgaaaattacttaggggaccaaa 26425869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 270
Target Start/End: Complemental strand, 53432270 - 53432097
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||| ||||| ||| |||||||| | | |||||||  |  || |||| |||||| |||||||||||||||| ||||||  |||| || |||||    
T  53432270 atcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatagacatttggggttaaacttaaccgtcaggga 53432171  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    | | |||||| |||| ||  ||||  ||||||||||||| | | |||||  | |||||||||||||||||||||    
T  53432170 tttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaac 53432097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 26491514 - 26491458
Alignment:
Q  208 aacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaat 264  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||    
T  26491514 aacggagcaaaataagagggaccaaaatgttgattttacgagttatgagaccaaaat 26491458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 52138652 - 52138771
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctctttt--aaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgt 147  Q
    ||||||||||||| ||||||||| |||   |||| |||  ||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||   | |    
T  52138652 agataaaatacacatgcgtaatccaataaccctccttttaaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccattct 52138751  T
Q  148 taacgttggtccaccataga 167  Q
    ||| ||||||| ||||||||    
T  52138752 taaagttggtctaccataga 52138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 37106263 - 37106354
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||| |||||||||||  | |||||||||| |||| ||||||  | ||||||||||||||| |||||||  ||||| |||||||||||||    
T  37106263 ttgactgacggagcaaaagcaaagggaccaaatcgttgattttagaacttatgggaccaaaataaaaacaacaaattagttaggggaccaaa 37106354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 11968713 - 11968647
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||||||||||||||||||| |||||||| |||||  || |||| ||||||||| |||||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacat 11968647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 36243625 - 36243531
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||| ||||||||| |  |||||||||| || | |||||| | |||| ||||||||||| ||||   ||||||||||||||||||||    
T  36243625 tttttgactaacagagcaaaactaaggggaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaa 36243531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 26495226 - 26495110
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaa 299  Q
    ||||||| |||||||||||| |  |||||||||| || | |||||| | |||| ||| ||||||| ||||   ||||||||||||||||||||  |||||    
T  26495226 tttgactgacggagcaaaaccaaggggaccaaaatgtgagttttacaatttataggagcaaaatgtaaactcataattatttaggggaccaaatattcaa 26495127  T
Q  300 ttaagccaatatattat 316  Q
    ||||||| |||| ||||    
T  26495126 ttaagcctatattttat 26495110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 34326982 - 34326868
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||| ||||||||  |||||||||| || ||||||  |  || ||| || ||||| |||||||||||| ||||||| || |||  || |||    
T  34326982 agataaaatacacttgcgtaattcaatggtcctcgttaaaaaaaaaatacaaacgattaaaatttaaataattaataggatctatagtagaccactctta 34326883  T
Q  150 acgttggtccaccat 164  Q
    | |||||||||||||    
T  34326882 aagttggtccaccat 34326868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 43776978 - 43776940
Alignment:
Q  308 atatattattaccagcttatatgagaacacattctgatg 346  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  43776978 atatattattaccagcttatatgagagcacattctgatg 43776940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 56157506 - 56157600
Alignment:
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||||| |||||||||| | ||||||||||| || | |||||| | |||||  ||||||||| ||||   ||||||||||| ||||||||    
T  56157506 tttttgactaatggagcaaaaccaaagggaccaaaatgtgagttttacaatttatgaaaccaaaatgtaaacgcataattatttagaggaccaaa 56157600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 15449990 - 15450069
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatag---acatttggagttaaa 181  Q
    |||||||||||||  ||||||| ||||||||||||||  || |||| |||||||||| ||||   |||||||||||||||    
T  15449990 gtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaa 15450069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 44499996 - 44500065
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |||||||||||||||||||    ||||||||||| | | |||||| ||||||||||||||||| ||||||    
T  44499996 tttgactaacggagcaaaagttaagggaccaaaatgatgattttaagagttatgggaccaaaacgaaaac 44500065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 53435661 - 53435834
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||| ||||| ||| |||||||    |||| |||||||  || |||| ||||||| |||||||||||||  |||||||  |||| || | |||    
T  53435661 atcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacatttaaagttaaacttaaccgtcaagga 53435760  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    | | |||||| |||||||  ||||  ||||| ||||||| | | |||||  | |||||||||||||||||||||    
T  53435761 tttatttgaccaacggaggtaaacttgaggggccaaaacatgagttttattacttatgggaccaaaatgaaaac 53435834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 6349402 - 6349532
Alignment:
Q  43 caccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaata---attaatatgatctatggtgg 139  Q
    |||||| ||||||||||||| ||||||||| || | ||||||||  |||||   |||| || |||||||||||||||   ||  ||||| ||||||||||    
T  6349402 caccataagataaaatacacttgcgtaatccaacgatcctctttagaaaaaaagatcaaacagtttaaattaaaatatatatatatatggtctatggtgg 6349501  T
Q  140 actgctgttaacgttggtccaccatagacat 170  Q
    ||  || |||| |||| ||||||||| ||||    
T  6349502 accactcttaaggttgatccaccatatacat 6349532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 42810116 - 42810184
Alignment:
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||||||||||||||| | |||||| | ||||||||||||| || ||||  ||||| ||||||||||||    
T  42810116 acggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacat 42810184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 42872333 - 42872401
Alignment:
Q  223 gagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    |||||||||||||||  ||||||  | ||||||||||||||||||||   ||||||| |||||||||||    
T  42872333 gagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggacca 42872401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 49896492 - 49896568
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    |||| ||||||||||||||||||||||| | ||||||  ||||||  || || | ||||||||||||||| ||||||    
T  49896492 atcaaacggtttaaattaaaataattaacaggatctacagtggaccactctttaggttggtccaccatagccatttg 49896568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 56157031 - 56156947
Alignment:
Q  209 acggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||| |  | |||||||| || | |||||| | |||||||||||||||| ||||   ||||||||||||||||||||    
T  56157031 acggagcaaaaccaaggagaccaaaatgtgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaa 56156947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 52137505 - 52137438
Alignment:
Q  226 ggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||| |||  |||||| | |||||||||||||||| |||||  ||||||||||| ||||||||    
T  52137505 ggaccaaaatgttggttttacaatttatgggaccaaaatgtaaacacataattatttagaggaccaaa 52137438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 20620203 - 20620135
Alignment:
Q  241 ttttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagccaa 308  Q
    |||||| | |||||||||||||||| ||||   ||||||||||| |||||||| || ||||||||||||    
T  20620203 ttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaaggtccaattaagccaa 20620135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 23103917 - 23103960
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggac 141  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||    
T  23103917 atcaaacggtttaaattaaaa-aattaataggatctatggtggac 23103960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 84 - 270
Target Start/End: Complemental strand, 35295920 - 35295734
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaa 183  Q
    |||||||| ||  |||| ||||||||||||||||||||||||| ||||||||||||||  || |||| |||||||||||| ||| |||||| ||||||      
T  35295920 ttttaaaatatagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacagatatttggggttaaagt 35295821  T
Q  184 taacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    ||||||| | | |  ||||||| |||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||||    
T  35295820 taacggtcatgaacttttttgattaactgagcaaaacaagagggactaaaacgttgactttacgagttatgggaccaaaatgtaaac 35295734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 293
Target Start/End: Original strand, 669297 - 669492
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||||||||||| | |||||||| ||||||||||||||  || |||| | ||||||||||||||||||||  ||||||  |||||||||||||    
T  669297 atcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagacatttgaggttaaagttaacggttaggga 669395  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
      |||||||| |||| ||||||| || ||||||| ||| ||| ||||||||| |||||||||||||||||||||   |||||| |||||||||||||    
T  669396 cctttttgacaaacgaagcaaaataaaagggaccgaaatgttgattttacgaattatgggaccaaaatgaaaactgataattacttaggggaccaaa 669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 50 - 293
Target Start/End: Complemental strand, 43441601 - 43441358
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    ||||||||||||| ||||||||| ||| ||| || |||||||||   |||| || ||||| |||||||||||||||| ||  ||||||||||  || |||    
T  43441601 agataaaatacacttgcgtaatccaatagtcatcctttaaaaaaaatatcaaacagtttacattaaaataattaataggacttatggtggaccactctta 43441502  T
Q  150 acgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgag 249  Q
    | |||||| |||||||||||||| | ||||||  |||| || | |||| ||||||| ||||||||||||    ||||||||||||  ||||||||| |||    
T  43441501 aggttggtacaccatagacatttagggttaaagttaaccgtcaaggatctttttgattaacggagcaaacgctgagggaccaaaatattaattttatgag 43441402  T
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||| |||||||||||||||||  | ||| |||||||||||||    
T  43441401 ttatgagaccaaaatgaaaacaacaatttacttaggggaccaaa 43441358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 44372985 - 44372764
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||| || || |||||| |||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| ||||||||||||||  || ||    
T  44372985 agataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtggaccactctt 44372886  T
Q  149 aacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacga 248  Q
    || ||| |||||| |||||||||| | ||||||  |||  || | |||  ||||||| |||||||||||||   |||||||||||| | |||||||| ||    
T  44372885 aatgttagtccactatagacatttagggttaaagttaatagtcatggacctttttgaataacggagcaaaagtcgagggaccaaaatgataattttaaga 44372786  T
Q  249 gttatgggaccaaaatgaaaac 270  Q
    |||||| |||||||||||||||    
T  44372785 gttatgagaccaaaatgaaaac 44372764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 44381841 - 44381620
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||| || || |||||| |||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| ||||||||||||||  || ||    
T  44381841 agataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtggaccactctt 44381742  T
Q  149 aacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacga 248  Q
    || ||| |||||| |||||||||| | ||||||  |||  || | |||  ||||||| |||||||||||||   |||||||||||| | |||||||| ||    
T  44381741 aatgttagtccactatagacatttagggttaaagttaatagtcatggacctttttgaataacggagcaaaagtcgagggaccaaaatgataattttaaga 44381642  T
Q  249 gttatgggaccaaaatgaaaac 270  Q
    |||||| |||||||||||||||    
T  44381641 gttatgagaccaaaatgaaaac 44381620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 306
Target Start/End: Complemental strand, 2414948 - 2414747
Alignment:
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatattt 201  Q
    |||||||||||||| | |||||||| ||||||||||||||  || |||| |||||||||  |||||||||||| ||||||  ||||||||| |||  |||    
T  2414948 acggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtccattatagacatttggggttaaagttaacggttaaggaccttt 2414849  T
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    ||||||||||||||||||| | |||||||||||||||  ||||| ||   |||||| ||||||||||||||| ||||| ||  |||||| ||||| ||||    
T  2414848 ttgactaacggagcaaaaccaaagggaccaaaacgttggtttta-ga---atgggagcaaaatgaaaacaagaaattacttgagggaccaaaagtccaat 2414753  T
Q  301 taagcc 306  Q
    ||||||    
T  2414752 taagcc 2414747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 43442776 - 43442878
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||  ||||| |||||||||| ||||||||||    
T  43442776 ttgactaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaatatgaaaacaacaaattacttaggggaccaaaagttcaat 43442875  T
Q  301 taa 303  Q
    |||    
T  43442876 taa 43442878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 50 - 306
Target Start/End: Complemental strand, 39981571 - 39981315
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||| ||||||||| ||||  || | ||||| ||||  ||||| ||||||||||||| ||||||||||  ||||||||||||||   | ||    
T  39981571 agataaaatacacatgcgtaatccaatgaccccccttttacaaaa--aatcaaacggtttaaattagaataattaattggatctatggtggaccattttt 39981474  T
Q  149 aacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacg 247  Q
    || ||||||||||||||||||||| || ||||||  |||| |||| ||| |||||||||| ||| |||||||| | | ||||||||| || ||||||||     
T  39981473 aaagttggtccaccatagacatttgggggttaaagttaacagtta-ggacatttttgactgacgaagcaaaaccaaaaggaccaaaatgtgaattttaca 39981375  T
Q  248 agttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
    | |||||||||||||||| ||||    |||||||||| ||| |||| || ||||||||||    
T  39981374 atttatgggaccaaaatgtaaacgcacaattatttagaggatcaaatgtccaattaagcc 39981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22537861 - 22537725
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    |||||||||||||||||   |||||||||| ||||| |||| || | | |||||||||| |||||| ||||| |||||| | |||||||||||  |||||    
T  22537861 agaagatgaagaaaatgaa-aaaaaattaggtgttggtggttcatcgtaagataaaatagacctgcataatccaatggttcccttttaaaaaa--aatca 22537765  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtgga 140  Q
     ||||||||||||||||||||||||| |||||||||||||    
T  22537764 aacggtttaaattaaaataattaataggatctatggtgga 22537725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 10957189 - 10957276
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaata 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||| ||||||||| ||||    
T  10957189 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaacaaattacttaggggaccaaaagtccaattaagctaata 10957276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 306
Target Start/End: Complemental strand, 41328474 - 41328217
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||  ||||||||| || |  |||| |||||||||| || ||| ||||||||||||| ||||||||||| ||||||||||||||   | ||    
T  41328474 agataaaatacatatgcgtaatccaacgaccctccttttaaaaaaata-tcaaacggtttaaattagaataattaataggatctatggtggaccattttt 41328376  T
Q  149 aacgttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttac 246  Q
    || |||| |||||||||||||||| || ||||||  |||| |||| |||  ||||||| | || || ||||| ||||| ||||||||| || | ||||||    
T  41328375 aaagttgttccaccatagacatttgggggttaaagttaacagtta-ggacctttttgattgactgatcaaaaccaaga-ggaccaaaatgtgagttttac 41328278  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagcc 306  Q
     | |||||||||||||||| ||||   ||||||||||| |||||||| || ||||||||||    
T  41328277 aatttatgggaccaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagcc 41328217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 10955948 - 10955843
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaat 300  Q
    |||||||||||||||||||||||||||| |||||||| ||||||  |||||||| | ||||||||||||||  ||||| ||| |||||| ||||| ||||    
T  10955948 ttgactaacggagcaaaacaagagggactaaaacgttgattttataagttatggaatcaaaatgaaaacaacaaattacttaagggaccaaaagtccaat 10955849  T
Q  301 taagcc 306  Q
    ||||||    
T  10955848 taagcc 10955843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 16756125 - 16756003
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||  ||||| | |||| |||||||||||||||||| |||||||||| |||  || ||    
T  16756125 agataaaatacacttgcgtaatctaatggtcctccttttaaaaaa--aatcaaatggttaaaattaaaataattaataggatctatggtagacaactttt 16756028  T
Q  149 aacgttggtccaccatagacatttg 173  Q
    || |||| | |||||||||||||||    
T  16756027 aaggttgtttcaccatagacatttg 16756003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 666829 - 666742
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac 289  Q
    ||||||||||||||||||||||||||||| |||  ||||||||| |||||||| || ||||||||||||   ||||||||||||||||    
T  666829 ttgactaacggagcaaaacaagagggaccgaaatattaattttatgagttatgagatcaaaatgaaaactgataattatttaggggac 666742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 32255290 - 32255126
Alignment:
Q  2 gaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcag 101  Q
    |||||||||||||| |   |||||||||| ||||| |||| || | | |||| ||||| |||||  ||||| ||||||  ||||||| ||||  |||||     
T  32255290 gaagatgaagaaaagg---aaaaaattaggtgttggtggtacatcgtaagattaaatagacctgtctaatccaatggttatcttttacaaaaa-aatcaa 32255195  T
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||||| |||||||||||||||||| ||||||||||||||  || |||| |||||||||||||| ||||    
T  32255194 acggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacat 32255126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 279
Target Start/End: Original strand, 13564117 - 13564329
Alignment:
Q  68 taatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccataga 167  Q
    ||||| |||||| ||||||| ||||| |||||  |||||| |||||||||||||||||| ||||||||||||||  || |||| | || |||||||||||    
T  13564117 taatccaatggttctctttttaaaaaataatctaacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccataga 13564216  T
Q  168 c---atttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaat 264  Q
    |   |||||| ||||||  |||||  | ||||| | |||| | ||||||| ||||   ||||||| ||||||  | |||||  | || ||||||||||||    
T  13564217 cattatttggggttaaacttaacg--tcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaat 13564314  T
Q  265 gaaaacaagtaatta 279  Q
    ||||||||| |||||    
T  13564315 gaaaacaagaaatta 13564329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 11502281 - 11502401
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||| |||||| ||||| |||||| ||||||| ||||   ||||| |||| | ||||||||||||||| || ||||||||||||||  || |||    
T  11502281 agataaaataaacctgcctaatccaatggttctctttttaaaagaaaatcaaacggctgaaattaaaataattactaggatctatggtggaccactctta 11502380  T
Q  150 acgttggtccaccatagacat 170  Q
    | ||||||| |||||||||||    
T  11502381 aggttggtctaccatagacat 11502401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 46201331 - 46201255
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||||| |||||||||||||||||||||||||||||||  || |||| |||||| |||||||||||||||| ||||||    
T  46201331 gtttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccatagacatttggggttaaa 46201255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 321
Target Start/End: Complemental strand, 26135722 - 26135623
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaat-atattattacca 321  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||   ||||| |||||||||| ||||| |||||||||| || ||||||||||||    
T  26135722 agggaccaaaacgttgattttagaagttatgggaccaaaatgaaaacatcaaattagttaggggaccaaaagtccaattaagcctataatattattacca 26135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 43460737 - 43460803
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||||||||||||||||||| ||||||||||||||  || |||| |||||||||||||||||||    
T  43460737 ggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacat 43460803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 30334555 - 30334631
Alignment:
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagtta 179  Q
    |||||||||||||||| |||||||| |||||||||||||||| | |||| |||||||| |||||||||||| ||||||    
T  30334555 acggtttaaattaaaa-aattaataggatctatggtggactgttcttaaagttggtcctccatagacatttagagtta 30334631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 291
Target Start/End: Complemental strand, 47059368 - 47059122
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaatta-atcagacggtttaaattaaaataa--ttaatatgatctatggtggactgct 145  Q
    ||||||||||||| ||||||||| ||||||| || ||||||| ||  | |||| |||||||||||||||| ||  |||||| | |||||||||| || ||    
T  47059368 agataaaatacacatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggctact 47059269  T
Q  146 gttaacgttggtccaccatagacatttgga--gttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattt 243  Q
     |||| |||| |||||||||||| ||||||  ||||||  ||||||| | |||| | |||| | ||||||| ||||   |||||| ||||||||  ||||    
T  47059268 cttaaggttgctccaccatagacttttggagggttaaacttaacggtca-ggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattt 47059170  T
Q  244 tacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    ||  | || | ||||||||||||||||    ||||| |||||||||||    
T  47059169 tattaattgtaggaccaaaatgaaaacttaaaattaattaggggacca 47059122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 47060329 - 47060468
Alignment:
Q  43 caccattagataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggac 141  Q
    |||||| ||||||||||||| || |||||  ||||||| || ||||||||||  ||||| ||| || || || ||| | |||||| | ||||||||||||    
T  47060329 caccataagataaaatacacttgtgtaattcaatggtcatccttttaaaaaacaaatcaaacgattaaattttaaaaatttaataaggtctatggtggac 47060428  T
Q  142 tgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    |  | |||| |||||||||||||| |||||||| ||||||    
T  47060429 tattcttaaggttggtccaccatatacatttggtgttaaa 47060468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 40811529 - 40811456
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    |||| ||||||||||||||||  |||||||  |||||||||||||  || |||| |||||||||||||||||||    
T  40811529 atcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacat 40811456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 293
Target Start/End: Complemental strand, 3413740 - 3413544
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||| ||||| ||| |||||||    ||||||||||||  || ||||  ||| |||||||||||||| || |||||||  |||| ||||||||    
T  3413740 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatccaccatagacatctgaagttaaacttaacagttaggga 3413641  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    | | |||| | ||| ||| ||||   ||||||| ||||||  | |||||  | || | ||||||||||||||||| | |||||||||| ||||||||    
T  3413640 tttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaattatttagaggaccaaa 3413544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 22336183 - 22336119
Alignment:
Q  102 acggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatag 166  Q
    |||||| |||||||||||||||||| ||||||||||||||  || |||| |||| ||||||||||    
T  22336183 acggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag 22336119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 291
Target Start/End: Original strand, 32256354 - 32256497
Alignment:
Q  147 ttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttac 246  Q
    |||| |||||||||||||||||||||| |||||||  |||||||| || || | |||| | || |||| ||||   |||||||||||| ||  ||||||     
T  32256354 ttaatgttggtccaccatagacatttgaagttaaagttaacggtt-ggaatttatttggcaaatggaggaaaaagtgagggaccaaaaggtacattttat 32256452  T
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
     | |||||||||||||||||||||  | ||||||||  |||||||    
T  32256453 taattatgggaccaaaatgaaaacttgaaattatttgagggacca 32256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 41329482 - 41329593
Alignment:
Q  201 tttgactaacggagcaaaa-caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttca 298  Q
    ||||||| |||||| |||| |||| |||||||||| || | |||||| | |||| ||||||||||| ||||   |||||||||||||||||||| || ||    
T  41329482 tttgactgacggagtaaaatcaag-gggaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtcca 41329580  T
Q  299 attaagccaatat 311  Q
    |||||||||||||    
T  41329581 attaagccaatat 41329593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 48312296 - 48312204
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcct-cttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggac 141  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||  | |||| ||  |||||||||||| |||||||| ||||||||||||||    
T  48312296 agataaaatagacctgcgtaatccaatggtcatccttttaaaaaaaaagatcaaaccatttaaattaaaa-aattaataggatctatggtggac 48312204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Original strand, 3414895 - 3414955
Alignment:
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagccaat 309  Q
    |||||||||||||||||||||| | ||||||||||||||| ||| |||| | |||||||||    
T  3414895 ttatgggaccaaaatgaaaacatgaaattatttaggggactaaacgttctaataagccaat 3414955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 26146742 - 26146830
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagccaatat 311  Q
    ||||||| |||| || ||||||  | |||| ||| ||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||    
T  26146742 agggaccgaaacattgattttaaaatttataggatcaaaatgaaaacaacaaattagttaggggaccaaaagtccaattaagccaatat 26146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 7354562 - 7354491
Alignment:
Q  247 gagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagccaatatattatt 317  Q
    |||||||| ||||||| | |||||||| ||| | ||||||||||||| ||||||||||| |||||| |||||    
T  7354562 gagttatgagaccaaattaaaaacaagaaataagttaggggaccaaaggttcaattaagtcaatattttatt 7354491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 47454559 - 47454460
Alignment:
Q  82 tcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||||| ||||||  ||||| |||||| ||||||| | |||||||| | |||| | |||||  || |||| ||||||| ||||||||||||| ||||||||    
T  47454559 tctttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacatttagagttaaa 47454460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 22337292 - 22337373
Alignment:
Q  109 aaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggt 190  Q
    ||||||| | |||||||| | |||| |||| ||| |  |||| |||||||||||||||||||||| |||||||  |||||||    
T  22337292 aaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccatagacatttgaagttaaatttaacggt 22337373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 181
Target Start/End: Original strand, 44554730 - 44554759
Alignment:
Q  152 gttggtccaccatagacatttggagttaaa 181  Q
    ||||||||||||||||||||||||||||||    
T  44554730 gttggtccaccatagacatttggagttaaa 44554759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 8426928 - 8427004
Alignment:
Q  231 aaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac-caaagttcaattaagcc 306  Q
    |||||| | |||||||||| |||  |||||||||||||||| | ||||| |||||||||  ||||| ||||||||||    
T  8426928 aaaacgatgattttacgagctataagaccaaaatgaaaacatgaaattaattaggggactaaaagtccaattaagcc 8427004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 25533267 - 25533223
Alignment:
Q  226 ggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |||||||||| | |||||||  |||||||||||||||||||||||    
T  25533267 ggaccaaaacatgaattttattagttatgggaccaaaatgaaaac 25533223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 35296830 - 35296918
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac 289  Q
    |||||||||||||||||||| |  || ||||||| || | |||||| | |||| ||||||||||| |||| |  |||||||||| ||||    
T  35296830 tttgactaacggagcaaaaccaagggtaccaaaatgtgagttttacaatttataggaccaaaatgtaaactacaaattatttagaggac 35296918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 11967523 - 11967328
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaa-ttagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttt---aaaaaatta 96  Q
    ||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||  || ||| ||||||||||||| ||||||   |||||||||    
T  11967523 agaagatgaagaaaaggtacaaaaaaattaggtgttgatggtgcaccattagataaaatg-acttgcttaatcaaatggtcatctttttaaaaaaaatta 11967425  T
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttag 193  Q
    |||| || ||||||||||||||||||||||||||||||| |||||  || | || |||||||||| |||||||||||  ||||||  ||||||||||    
T  11967424 atcaaacagtttaaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaatagacatttgaggttaaagttaacggttag 11967328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 54 - 308
Target Start/End: Complemental strand, 11723038 - 11722782
Alignment:
Q  54 aaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacg 152  Q
    |||||||||||| |||||| ||||  |||| ||||||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||   | |||| |    
T  11723038 aaaatacacctgtgtaatccaatgaccctccttttaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaag 11722939  T
Q  153 ttggtccaccatagacattt-ggagttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttacgagt 250  Q
    | |||||||||||||||||| || ||||||  |||| ||||  ||  ||||||||| ||||||||||| ||||| ||||||||| || | |||||| | |    
T  11722938 tcggtccaccatagacatttgggggttaaagttaacagtta-tgacctttttgactgacggagcaaaaccaaga-ggaccaaaatgtgagttttacaatt 11722841  T
Q  251 tatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaattaagccaa 308  Q
    ||||||| ||||||| |||||  ||||||||||| ||| |||| || ||||||||||||    
T  11722840 tatgggatcaaaatgtaaacacataattatttagaggatcaaatgtccaattaagccaa 11722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 17837920 - 17837752
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    ||||||||||||||| |  ||||||||||||||||| |||| || | | |||||||||| |||||| ||||| ||||||  || |||  || |  |||||    
T  17837920 agaagatgaagaaaagga-caaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatcgtttttaagaaaaatca 17837822  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     |||||| |||||||||||||||||| ||||||||||||||  || |||| ||| |||||||||||||||    
T  17837821 aacggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacat 17837752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29381542 - 29381710
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    ||||||||||||||| |  ||||||||||||||||| |||| || | | |||||||||| |||||| ||||| ||||||  ||||||  ||||  |||||    
T  29381542 agaagatgaagaaaagga-caaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatctttttgaaaaaaaatca 29381640  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     |||||| |||||||||||||||||| |||||||||||||   || |||| ||| |||||||| ||||||    
T  29381641 aacggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacat 29381710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 11968490 - 11968581
Alignment:
Q  202 ttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||  |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||  ||||| |||||||||||||    
T  11968490 ttgactaacaaagcaaaacaaaagggaccaaaacgttaattttacaggttatgagaccaaaatgaaaacaacaaattagttaggggaccaaa 11968581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 5187453 - 5187601
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataa 120  Q
    |||||||||| |||||||||| ||  || |||||||||| | |||| ||||| |||| | ||||||||||| |  ||||| || ||| ||||||| ||||    
T  5187453 aaaaaattaggtgttgatggtacatgataagataaaatagagctgcttaatccaatgatgctcttttaaaataaaaatcaaacagttgaaattaatataa 5187552  T
Q  121 ttaatatgatctatggtggactgctgttaacgttggtccaccatagaca 169  Q
    |||||| ||||||||||| ||  || |||| |||||||||| |||||||    
T  5187553 ttaataggatctatggtgaaccacttttaaggttggtccactatagaca 5187601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 7311566 - 7311705
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaa-aaattaatcagacggtttaaattaaaataattaatatgat 130  Q
    |||||||||| || | | |||||||||||| ||  || ||| || ||||||  |||||| |||  ||||| ||||||||||||||||||||||||| |||    
T  7311566 tgttgatggttcaacgtaagataaaatacatctatgtgatccaacggtcctgctttaaacaaaaaaatcaaacggtttaaattaaaataattaataggat 7311665  T
Q  131 ctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     ||||||||||  || |||| |||||| ||||||||||||    
T  7311666 ttatggtggaccactcttaaggttggttcaccatagacat 7311705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 30231559 - 30231476
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||  ||||| ||| |||||| ||||| ||||||||||    
T  30231559 agggaccaaaacgttgattttagaagttatgggaccaaaatgaaaacaacaaattagttaagggaccaaaagtccaattaagcc 30231476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 18346564 - 18346722
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    |||||||||||||||||   || ||||||| ||||| |||| || | | |||||||||| || ||| ||||| ||||||   |||||||||||  |||||    
T  18346564 agaagatgaagaaaatga--aacaaattaggtgttggtggtacatcgtaagataaaatagacttgcataatccaatggtttacttttaaaaaaa-aatca 18346660  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccacc 162  Q
     ||||||||||||||||||||||||| ||| ||| ||||||  || |||| |||||| ||||    
T  18346661 aacggtttaaattaaaataattaataggatttatagtggaccactcttaaggttggttcacc 18346722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 23397270 - 23397458
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatattttt 203  Q
    |||| ||||||| | |||||||| | | || |||||||| || |||| |||||||||||||||||||||| |||||||  |||||| | ||||| | |||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacatttgaagttaaatttaacgg-tcgggatttattt 23397368  T
Q  204 gactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    | | ||||||| ||||   ||||||| ||||||  | |||||  | || ||||||||||||||||||| | |||||  || |||||||||    
T  23397369 ggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaaa 23397458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 23392472 - 23392358
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaat--cagacggtttaaattaaaataattaatatgatctatggtggactgctgt 147  Q
    |||||||||| || ||| ||||| ||||||  ||||||||||||  |||  || |||||| |||||||||||||||||| ||||||||||||||  || |    
T  23392472 agataaaatagacttgcataatctaatggttatcttttaaaaaaaaaatatcaaacggttgaaattaaaataattaataggatctatggtggaccacttt 23392373  T
Q  148 taacgttggtccacc 162  Q
    ||| |||| ||||||    
T  23392372 taaggttgatccacc 23392358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 30232941 - 30233024
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacc-aaagttcaattaagcc 306  Q
    ||||||| ||||||| ||||||  |||||||||||||||||||||||||  || || |||||||||| ||||| ||||||||||    
T  30232941 agggaccgaaacgttgattttagaagttatgggaccaaaatgaaaacaacaaactagttaggggaccaaaagtccaattaagcc 30233024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 138241 - 138310
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||| ||||||| ||||||  ||||||||||||||||||||||||   ||||| |||||||||||||    
T  138241 agggaccgaaacgttgattttagaagttatgggaccaaaatgaaaacatcaaattagttaggggaccaaa 138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 146262 - 146331
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||| ||||||| ||||||  ||||||||||||||||||||||||   ||||| |||||||||||||    
T  146262 agggaccgaaacgttgattttagaagttatgggaccaaaatgaaaacatcaaattagttaggggaccaaa 146331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 136708 - 136625
Alignment:
Q  224 agggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggac-caaagttcaattaagcc 306  Q
    ||||||||||||||| ||||||  ||||||||||| ||||| |||||||  ||||| |||||||||  ||||| ||||||||||    
T  136708 agggaccaaaacgttgattttaaaagttatgggactaaaataaaaacaacaaattagttaggggacgaaaagtccaattaagcc 136625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 11967326 - 11967260
Alignment:
Q  227 gaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||| || |||||| ||||||||  ||||||||||||||||  ||||| |||||||||||||    
T  11967326 gaccaaaacattgattttatgagttatgaaaccaaaatgaaaacaacaaattaattaggggaccaaa 11967260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 12669923 - 12669855
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    ||||| ||||| | || ||||||||||||||||||||  || |||| |||||||||||||| |||||||    
T  12669923 gtttatattaataaaaataatatgatctatggtggaccactcttaaggttggtccaccatacacatttg 12669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 6452572 - 6452614
Alignment:
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggaccaa 292  Q
    |||||||||||||||||||||  | ||||||||||||||||||    
T  6452572 ttatgggaccaaaatgaaaacttgaaattatttaggggaccaa 6452614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 17839055 - 17839243
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatattttt 203  Q
    |||| ||||||| | |||||||| | ||||   |||||| || |||| |||  ||||||||  ||||||| |||||||| |||||||  ||||| | |||    
T  17839055 ggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatctacatttgaagttaaaattaacggtc-gggatttattt 17839153  T
Q  204 gactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    | | ||||||| ||||   ||||||| ||||||  | |||||  | || ||||||||||||||||||||| |||||  || |||||||||    
T  17839154 ggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacaagaaattaaataagggaccaaa 17839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 15728958 - 15728862
Alignment:
Q  78 gtcctcttttaaaaaattaa-tcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    |||||||||||||||| ||| || || | |||||||||||  |||||||| | |||||||||||||     ||| |||||||||||||||| |||||    
T  15728958 gtcctcttttaaaaaaataaatcggatgatttaaattaaagaaattaatagggtctatggtggactatctataatgttggtccaccatagatatttg 15728862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 35037208 - 35037168
Alignment:
Q  230 caaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    ||||||||| |||||| |||||||| |||||||||||||||    
T  35037208 caaaacgttgattttatgagttatgagaccaaaatgaaaac 35037168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 84 - 270
Target Start/End: Original strand, 14745095 - 14745281
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaa 183  Q
    |||||||| ||  |||| || |||||||||||||||||||||| ||||||||||| ||  || |||| |||||||||||| ||| |||||| ||||||      
T  14745095 ttttaaaatatagatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccaccacagatatttggggttaaagt 14745194  T
Q  184 taacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    | ||||| | |||  |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||    
T  14745195 tgacggtcatggacttttttgactaactgagcaaaacaagagggaccaaaacgttgactttacgagttatgggaccaagatgtaaac 14745281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 37415299 - 37415007
Alignment:
Q  3 aagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaatta--atca 100  Q
    ||||||||||||| ||  |||| ||||| | |||| ||||||||||||||||||||| || || |||||  ||||||||||||||||||||  |  ||      
T  37415299 aagatgaagaaaaagtaaaaaatattaggtattgacggtgcaccattagataaaataaacatgtgtaattcaatggtcctcttttaaaaaaaaacaattt 37415200  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatt 200  Q
     |||||| ||||||||| |||||||| ||||||||||||||     |      || || || | ||||||||  |||||||  |||| | || |||  ||    
T  37415199 aacggttaaaattaaaagaattaataagatctatggtggaccaacatcgtttgtgttctactagagacatttaaagttaaagttaacagctaaggacctt 37415100  T
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||| ||  ||||| ||| |||||||||    
T  37415099 tttgactaacggagcaaaacaagaggaaccaaaatgttgattttacgagttatgagaccaaaatgaaaataacaaattacttaagggaccaaa 37415007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 37416413 - 37416542
Alignment:
Q  164 tagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaa 263  Q
    |||||||||  |||||||  |||| |||| | || |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||    
T  37416413 tagacatttaaagttaaagttaacagttaagaatctttttgactaacggagcaaaacaagagggaccaaaatgttgattttatgagttatggaaccaaaa 37416512  T
Q  264 tgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||||  ||||| |||||||||||||    
T  37416513 tgaaaacaacaaattacttaggggaccaaa 37416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 50 - 293
Target Start/End: Complemental strand, 13621175 - 13620932
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||||| |||||||||| ||||  |||| ||| |||||  ||| | ||||||||||||| ||||||||||| ||||||||||||||   | ||     
T  13621175 agataaaatacatctgcgtaatccaatgaccctccttttaaaaaaaaattaaacggtttaaattagaataattaataggatctatggtggaccatttttt 13621076  T
Q  150 acgttggtccaccatagacatttgga-gttaaaaataacggttagggatatttttgactaacggagcaaaa-caagagggaccaaaacgttaattttacg 247  Q
    | || ||||||||||||||||||||| ||||||  |||| || | |||  ||||||||| ||||||||||| ||||| ||||||||| || | ||||||     
T  13621075 aagtcggtccaccatagacatttggaggttaaagttaacagtga-ggacctttttgactgacggagcaaaaccaaga-ggaccaaaatgtgagttttaca 13620978  T
Q  248 agttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    | ||||| |||||||||| ||||   ||||||||||| ||||||||    
T  13620977 atttatgagaccaaaatgtaaacgcataattatttagaggaccaaa 13620932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26886575 - 26886416
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatca 100  Q
    |||||||||||||||||   |||||||||| ||||| |||| || | | |||||||||| || ||| ||||| |||||| | |||||||||||  |||||    
T  26886575 agaagatgaagaaaatga--aaaaaattaggtgttggtggtacatcgtaagataaaatagacatgcataatccaatggttcccttttaaaaaaaaaatca 26886478  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccacc 162  Q
     ||||||||||||||||||||||||| ||| ||||||||||  || |||| |||||| ||||    
T  26886477 aacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcacc 26886416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 20288139 - 20288328
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatattttt 203  Q
    |||||||||||||  |||||||| | ||||||||||| |     ||| ||||||||||||||||||||||||||||||  |||| || |||||| | |||    
T  20288139 ggtttaaattaaataaattaataaggtctatggtggaatatctataatgttggtccaccatagacatttggagttaaacttaacagtcagggatttattt 20288238  T
Q  204 gactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||| |||  ||||  |||||||||| || | | |||||  | |||||||| |||||||||||| |  ||||| |||||||||||||    
T  20288239 gactaacagagacaaacttgagggaccaacacatgagttttattaattatgggatcaaaatgaaaactaaaaattaattaggggaccaaa 20288328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 3208788 - 3208520
Alignment:
Q  2 gaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaa-tca 100  Q
    |||||||||||||| |   |||||||||| |||||||||| || | | ||||||| || || ||| || || |||||| || |||| |||||| || |||    
T  3208788 gaagatgaagaaaaggaaaaaaaaattaggtgttgatggtacatcgtaagataaattagacttgccta-tccaatggttctatttttaaaaataaaatca 3208690  T
Q  101 gacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccata--gacatttggagttaaaaataacggttagggata 198  Q
     ||||||||||||| ||||||||||| ||| ||||||||||  || |||| ||||||||||||||    ||||||| ||||||  |||||| || ||||     
T  3208689 aacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccataatatcatttggggttaaacttaacgg-taaggatt 3208591  T
Q  199 tttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaa 269  Q
    | |||||| ||||||| |||| |  ||||| ||||||||   |||||  | ||||||||||||||||||||    
T  3208590 tatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaattatgggaccaaaatgaaaa 3208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 35371211 - 35371043
Alignment:
Q  1 agaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctctttt-aaaaaattaatc 99  Q
    ||||||||||||||| |   |||||||||| ||||| |||| || | | |||||||||| || ||| ||||| |||||| ||||||| ||||||  ||||    
T  35371211 agaagatgaagaaaagga--aaaaaattaggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatggttctctttttaaaaaaaaaatc 35371114  T
Q  100 agacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    | |  ||| |||||||||||||||||| ||||||||||||||  || |||| |||||||||||||| ||||    
T  35371113 aaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacat 35371043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 34819116 - 34819265
Alignment:
Q  21 aaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataa 120  Q
    |||||||||| ||||| |||| |||||| |||||||||| || ||| ||||| |||||| || |||| | |||  || || || ||||||||||||||||    
T  34819116 aaaaaattaggtgttggtggtacaccataagataaaatagacttgcctaatccaatggttctttttttataaaaaaaacaaacagtttaaattaaaataa 34819215  T
Q  121 ttaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     ||||| ||||||||||||||  || |||| |||| ||||| ||||||||    
T  34819216 gtaataggatctatggtggaccactcttaaggttgatccactatagacat 34819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 49379957 - 49379833
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctc-ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtt 148  Q
    |||||||||||| |||||||||| ||||  |||| |||||||||| || ||| || |||||||||| ||||||||||| ||||||||||||||   | ||    
T  49379957 agataaaatacatctgcgtaatccaatgaccctccttttaaaaaaata-tcaaacagtttaaattagaataattaataggatctatggtggaccattttt 49379859  T
Q  149 aacgttggtccaccatagacatttgg 174  Q
    || || ||||||||||||||||||||    
T  49379858 aaagtcggtccaccatagacatttgg 49379833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 10731989 - 10732109
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 149  Q
    |||||||||| || ||| ||||| |||||| || | |||||| |  ||||| |||||  |||||||||||||||||| |||||||||||||| ||| | |    
T  10731989 agataaaatagacttgcctaatccaatggttctttgttaaaagaaaaatcaaacggtcgaaattaaaataattaataggatctatggtggaccgctctaa 10732088  T
Q  150 acgttggtccaccatagacat 170  Q
    | |||||||||||||||||||    
T  10732089 aggttggtccaccatagacat 10732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 41264468 - 41264601
Alignment:
Q  2 gaagatgaagaaaatgtgcaaaaaattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcag 101  Q
    ||||||||||||||   | |||||||||| ||||| |||| || | | |||||||||| |||||| ||||  |||||| ||||||| |||||  |||||     
T  41264468 gaagatgaagaaaa---gaaaaaaattaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttaaaaaaaaatcaa 41264564  T
Q  102 acggtttaaattaaaataattaatatgatctatggtg 138  Q
    |||||  |||||||||||||||||| |||||||||||    
T  41264565 acggtcgaaattaaaataattaataggatctatggtg 41264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 293
Target Start/End: Original strand, 3455550 - 3455729
Alignment:
Q  115 aaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacattt---ggagttaaaaataacggttagggatatttttgactaacg 211  Q
    |||||||||||||||||||||||||||  || |||| |||||||||||||| ||||||   || ||||||  |||| || | |||| | ||||||| |||    
T  3455550 aaataattaatatgatctatggtggaccactcttaaggttggtccaccata-acattttggggggttaaagttaactgtca-ggatttatttgactgacg 3455647  T
Q  212 gagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||  ||||| || |||||||||| | | |||||  ||||||| |||||||||||||||  | ||||| || ||||||||||    
T  3455648 gagacaaacatgaaggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaattaattcggggaccaaa 3455729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 38242357 - 38242496
Alignment:
Q  32 tgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaa-aaattaatcagacggtttaaattaaaataattaatatgat 130  Q
    |||||||||| || | | |||||||||||| || ||| ||| || |||| |  |||||| |||  ||||| |||||||||||||||||||||||||  ||    
T  38242357 tgttgatggttcaacgtaagataaaatacatctacgtgatccaacggtcatgctttaaacaaaaaaatcaaacggtttaaattaaaataattaatagaat 38242456  T
Q  131 ctatggtggactgctgttaacgttggtccaccatagacat 170  Q
     ||||||||||  || |||| |||||||||||||||||||    
T  38242457 ttatggtggaccactcttaaggttggtccaccatagacat 38242496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 53614151 - 53614254
Alignment:
Q  68 taatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccataga 167  Q
    ||||| |||||| ||||||| ||||| |||||  |||||| ||||||||||||||| || ||||||||||||||  || |||| | || |||||||||||    
T  53614151 taatctaatggttctctttttaaaaaataatctaacggttgaaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccataga 53614250  T
Q  168 catt 171  Q
    ||||    
T  53614251 catt 53614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 10301161 - 10301066
Alignment:
Q  78 gtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    ||||| ||| ||||||  ||||| || |||||||||||||||||||||| |||||||||||||   || |||| |||||| ||||||||| |||||    
T  10301161 gtcctatttaaaaaaaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccatagatatttg 10301066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 270
Target Start/End: Complemental strand, 10338947 - 10338773
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggg 195  Q
    ||||| || ||| |||||||||||||||||| ||||||||||||||  || |||| |||||| ||  |||||||| ||  ||||||  |||| |  || |    
T  10338947 aatcaaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggttcattatagacatctgaggttaaagttaacaggcagag 10338848  T
Q  196 atatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    |  ||||||| ||| ||||||||    |||||||||||| | | ||||||  | |||||||||||||||||||||    
T  10338847 acttttttgaataagggagcaaacgttgagggaccaaaatgatgattttaaaatttatgggaccaaaatgaaaac 10338773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 234
Target Start/End: Original strand, 20314651 - 20314809
Alignment:
Q  77 ggtcctctttt-aaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttgga 175  Q
    ||||||||||| ||||||| ||||| | |||||||||||||  |||||||| | |||||||||||||     ||| ||||||| | ||||||||||||||    
T  20314651 ggtcctcttttgaaaaaataaatcaaatggtttaaattaaataaattaataaggtctatggtggactatctataatgttggtctaacatagacatttgga 20314750  T
Q  176 gttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaa 234  Q
    ||||||  |||| || | | || | |||||||||| |||  ||||  ||||||||||||    
T  20314751 gttaaacttaacagtcatgaatttatttgactaacagagacaaacttgagggaccaaaa 20314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 234
Target Start/End: Original strand, 20336572 - 20336702
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatattttt 203  Q
    |||||||||||||  |||||||| | |||||||||||||     ||| ||||||||| ||||||||||||||||||||  |||| || | | || | |||    
T  20336572 ggtttaaattaaataaattaataaggtctatggtggactatctataatgttggtccaacatagacatttggagttaaacttaacagtcatgaatttattt 20336671  T
Q  204 gactaacggagcaaaacaagagggaccaaaa 234  Q
    |||||||||||  ||||  ||||||||||||    
T  20336672 gactaacggagacaaacttgagggaccaaaa 20336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 48083428 - 48083359
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttg 173  Q
    ||||||||||||||||||||||| |||||||||| |||  || |||| ||| || |||||||||||||||    
T  48083428 ggtttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatagacatttg 48083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 24487180 - 24487266
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggt 137  Q
    |||||||||| | |||| |||||||||||||||| |||||||||   |||| ||  |||||||||||| |||||||| ||||||||||    
T  24487180 agataaaatagatctgcttaatcaaatggtcctcctttaaaaaaaagatcatacaatttaaattaaaa-aattaataggatctatggt 24487266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 27841616 - 27841690
Alignment:
Q  96 aatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||| || ||| ||||||||||||||| || ||||||||||||||  || |||| |||||||||||||| ||||    
T  27841616 aatcaaacagttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacat 27841690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 28909523 - 28909686
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttg 204  Q
    ||||||||||||| |||||||| ||||||||||||||     ||||   |||| ||||| ||| |||||| ||||||  |||  || || ||| | ||||    
T  28909523 gtttaaattaaaaaaattaataggatctatggtggaccaaccttaagagtggttcaccacagatatttggggttaaacttaa--gtcagagatttatttg 28909620  T
Q  205 actaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
    || |||||||  ||||  ||||||||||||| | | |||||  |||||||||||||||||||||||    
T  28909621 accaacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaac 28909686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 270
Target Start/End: Complemental strand, 7270507 - 7270358
Alignment:
Q  121 ttaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaac 220  Q
    |||||| |||||||||| |||  || |||| |||||||||| | |||||||||  ||||||  ||||||||||||||   ||| | |||  |||   |||    
T  7270507 ttaataagatctatggtagaccactcttaaggttggtccactacagacatttgaggttaaagttaacggttagggattaatttcattaatagaggttaac 7270408  T
Q  221 aagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaac 270  Q
      |||||||||||| ||| |||||| || ||||||||| |||||||||||    
T  7270407 ttgagggaccaaaatgttgattttaagacttatgggacaaaaatgaaaac 7270358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 42685097 - 42685000
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    ||||||||||   |||| |||||||||||||||| | |||||| | | ||||||||||  || ||||  ||||| |||||||||||||||| ||||||    
T  42685097 ttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacatttggggttaaa 42685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 46369045 - 46368973
Alignment:
Q  67 gtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtgga 140  Q
    |||||| |||||| |||| ||||||||| ||| | | | ||||||||||||||||||||||||| |||||||||    
T  46369045 gtaatctaatggttctctcttaaaaaat-aataaaatgatttaaattaaaataattaatatgatatatggtgga 46368973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 13621970 - 13622077
Alignment:
Q  201 tttgactaacggagcaaaa-caagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttca 298  Q
    ||||||| ||| ||||||| |||| |||||||||| || | |||||| | |||| ||||||||||| ||||   |||||||||||||||||||| || ||    
T  13621970 tttgactgacgaagcaaaatcaag-gggaccaaaatgtgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaatgtcca 13622068  T
Q  299 attaagcca 307  Q
    |||||||||    
T  13622069 attaagcca 13622077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 53622907 - 53622831
Alignment:
Q  50 agataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaata 126  Q
    |||||||||| || ||||||||| ||| || ||| ||||||| |  ||||| |||||||||||||||| ||||||||    
T  53622907 agataaaatagacatgcgtaatccaatcgtactcctttaaaataagaatcaaacggtttaaattaaaacaattaata 53622831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 54110138 - 54110233
Alignment:
Q  43 caccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtgg 139  Q
    |||||| |||||||||| |||| |  |||| ||||||| || ||| |||||  ||||| ||| |||||||||||| |||||||| ||||||||||||    
T  54110138 caccataagataaaatagacctacaaaatccaatggtcatcgttttaaaaaaaaatcaaacgatttaaattaaaa-aattaataggatctatggtgg 54110233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 291
Target Start/End: Complemental strand, 53420517 - 53420330
Alignment:
Q  105 gtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataa-cggttagggatattttt 203  Q
    |||||||||||||   |||||| | |||||||||||   || |||| ||||||||||||||||||||||  ||||||  |||  |  ||||||| | |||    
T  53420517 gtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacatttgtggttaaacttaatagactagggatttattt 53420418  T
Q  204 gactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggacca 291  Q
    ||  ||||||| ||||   |||||||||||||||   |||||  | || | ||||||||||||||| | | ||||| |||||||||||    
T  53420417 gataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaatatgaaattagttaggggacca 53420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 3817325 - 3817367
Alignment:
Q  251 tatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||||||||||||||| | ||||| |||||||||||||    
T  3817325 tatgggaccaaaatgaaaacatgaaattagttaggggaccaaa 3817367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 50809629 - 50809563
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaa 91  Q
    |||||||||||| || | |||| | |||||||||| || ||||||||| |||||| |||||||||||    
T  50809629 aattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 50810742 - 50810808
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaa 91  Q
    |||||||||||| || | |||| | |||||||||| || ||||||||| |||||||||| |||||||    
T  50810742 aattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 50865122 - 50865056
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaa 91  Q
    |||||||||||| || | |||| | |||||||||| || ||||||||| |||||||||| |||||||    
T  50865122 aattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 50866233 - 50866299
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaa 91  Q
    |||||||||||| || | |||| | |||||||||| || ||||||||| |||||| |||||||||||    
T  50866233 aattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 53194520 - 53194701
Alignment:
Q  97 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttaggga 196  Q
    |||| |||||||||| ||||||||||||||  ||||||||||||   || ||||  || ||| |||||||| ||||  |||||||  ||||||| | |||    
T  53194520 atcaaacggtttaaaataaaataattaatagaatctatggtggatcacttttaagatttgtctaccatagatatttaaagttaaagttaacggtca-gga 53194618  T
Q  197 tatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaatta 279  Q
      ||||||| ||||  |||||||   || ||||||||| | | ||||||  | |||||| ||||||||||||||  |||||||    
T  53194619 cttttttgaataacaaagcaaaagttgaaggaccaaaatgatgattttaaaacttatggaaccaaaatgaaaactggtaatta 53194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 20599513 - 20599566
Alignment:
Q  240 attttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||| ||||||||||||||||| ||||||||  ||||| ||| |||||||||    
T  20599513 attttaggagttatgggaccaaaacgaaaacaaagaattagttaagggaccaaa 20599566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 50810808 - 50810937
Alignment:
Q  163 atagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaa 262  Q
    |||||||||| ||||||||  |||| ||| | ||| | |||| | ||||||| |||| | ||||||| |||||||   |||||  | |||||||||||||    
T  50810808 atagacatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaa 50810907  T
Q  263 atgaaaacaagtaattatttaggggaccaa 292  Q
    |||||||   | ||||||||| ||||||||    
T  50810908 atgaaaaattgaaattatttaagggaccaa 50810937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 50865056 - 50864927
Alignment:
Q  163 atagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaa 262  Q
    |||||||||| ||||||||  |||| ||| | ||| | |||| | ||||||| |||| | ||||||| |||||||   |||||  | |||||||||||||    
T  50865056 atagacatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaa 50864957  T
Q  263 atgaaaacaagtaattatttaggggaccaa 292  Q
    |||||||   | ||||||||| ||||||||    
T  50864956 atgaaaaattgaaattatttaagggaccaa 50864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 18442432 - 18442372
Alignment:
Q  121 ttaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    |||||| | |||||||||||||   | ||| ||||||||||||||||||||||| ||||||    
T  18442432 ttaataaggtctatggtggactatcgataatgttggtccaccatagacatttggggttaaa 18442372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 19487506 - 19487446
Alignment:
Q  121 ttaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    |||||| | |||||||||||||   | ||| ||||||||||||||||||||||| ||||||    
T  19487506 ttaataaggtctatggtggactatcgataatgttggtccaccatagacatttggggttaaa 19487446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 49380966 - 49381058
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||| |||||||||||| |  || |||||||  | | |||||| | |||| ||||||||||| ||||   ||||||||||||||||||||    
T  49380966 tttgactgacggagcaaaaccaagggtaccaaaatatgagttttacaatttataggaccaaaatgtaaactcataattatttaggggaccaaa 49381058  T

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Target: scaffold0011 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 25 - 293
Target Start/End: Complemental strand, 127713 - 127445
Alignment:
Q  25 aattagatgttgatggtgcaccattagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaa 124  Q
    |||||||||||| ||   |||| | |||||||||| |||||  ||||| ||| || ||| ||| |||||  ||||  ||||||||||||||||  |||||    
T  127713 aattagatgttgttgactcaccgtaagataaaatagacctgtttaatctaatcgttctccttttaaaaaaaaatctaacggtttaaattaaaaacattaa 127614  T
Q  125 tatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaaga 224  Q
    || ||||||||||||||  || |||| |||| | |||||||||||||||  ||||||  |||| || |||||| | ||||||  ||||||  ||||| ||    
T  127613 taggatctatggtggaccactcttaaggttgtttcaccatagacatttgaggttaaagttaactgtcagggatttatttgaccgacggaggcaaacatga 127514  T
Q  225 gggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||||||||| | | |||||  |||||||||||||||| ||||||  | ||||| |||||||||||||    
T  127513 gggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaaa 127445  T

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Target: scaffold0118 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 43433 - 43554
Alignment:
Q  48 ttagataaaatacacctgcgtaatcaaatggtcctcttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgt 147  Q
    |||||||||||| || ||| |||||||||||| ||||||| |||||  ||||| ||||||||||||||||||||||||| ||||||||||||||  || |    
T  43433 ttagataaaatagacttgcctaatcaaatggttctctttttaaaaaa-aatcaaacggtttaaattaaaataattaataggatctatggtggaccactct 43531  T
Q  148 taacgttggtccaccatagacat 170  Q
    |||  ||||||||||||||||||    
T  43532 taagattggtccaccatagacat 43554  T

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Target: scaffold0077 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 54080 - 54164
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacat 170  Q
    ||||||||||  ||||| || |||||||||||||||||||||| ||||||||||||||  || |||| |||||||||||||||||||    
T  54080 ttttaaaaaa--aatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacat 54164  T

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Target: scaffold0114 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 38644 - 38526
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa-gttcaa 299  Q
    ||||||| |||||| ||||| |  |||||||||| || | |||||| | |||||||||||||||| ||||   |||||||||||||||||||| || |||    
T  38644 tttgactgacggaggaaaaccaaggggaccaaaatgtgagttttacaatttatgggaccaaaatggaaactcataattatttaggggaccaaatgtccaa 38545  T
Q  300 ttaagccaatatattatta 318  Q
    |||||||||||| ||||||    
T  38544 ttaagccaatattttatta 38526  T

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Target: scaffold2071 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 293
Target Start/End: Original strand, 559 - 785
Alignment:
Q  68 taatcaaatggtcctcttttaaaaaatta-atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatag 166  Q
    ||||| ||||||| |||||| |||||  | |||| |||||||||||||||| | |||||| | ||||||||||||  || |||| |||||||||  |||     
T  559 taatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatat 658  T
Q  167 acatttggagttaaaaataacggttagggatatttttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatga 266  Q
    |||||||  ||||||  | ||  | |||||| | ||||||  || |||  ||||  ||||||||||||| | | |||||  |||||||||||||||||||    
T  659 acatttgaggttaaacttgacaatcagggatttatttgaccgacagagacaaacttgagggaccaaaacatgagttttattagttatgggaccaaaatga 758  T
Q  267 aaacaagtaattatttaggggaccaaa 293  Q
    ||||  | ||||| |||| ||||||||    
T  759 aaactggaaattaattagaggaccaaa 785  T

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Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 39928 - 39836
Alignment:
Q  201 tttgactaacggagcaaaacaagagggaccaaaacgttaattttacgagttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    |||||||  |||||||||||| ||| |||   |||||| ||||||| |||||||||||||||||||||| ||  ||||| |||||||||||||    
T  39928 tttgactggcggagcaaaacaggagagactggaacgttgattttacaagttatgggaccaaaatgaaaataataaattacttaggggaccaaa 39836  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 124188 - 124092
Alignment:
Q  84 ttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagacatttggagttaaa 181  Q
    |||||||||||  |||| ||| |||||||||| | | |||||| ||||||||||||||  || |||| |||||||||||||||| |||||| ||||||    
T  124188 ttttaaaaaatagatcaaacgatttaaattaaca-atttaatacgatctatggtggaccactcttaaggttggtccaccatagatatttggggttaaa 124092  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 125108 - 125212
Alignment:
Q  68 taatcaaatggtcctctttt-aaaaaattaatcagacggtttaaattaaaataa-ttaatatgatctatggtggactgctgttaacgttggtccaccata 165  Q
    ||||| ||||||| |||||| |||||| | |||| | |||||||||||||| || |||||| | ||||||||||||  || |||| ||||||||| ||||    
T  125108 taatccaatggtcatctttttaaaaaactgatcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcata 125207  T
Q  166 gacat 170  Q
     ||||    
T  125208 tacat 125212  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 108715 - 108654
Alignment:
Q  104 ggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccata 165  Q
    ||||||||||| |||||||||||  |||||||||||||  || |||| ||||||||||||||    
T  108715 ggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata 108654  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 61906 - 61863
Alignment:
Q  250 ttatgggaccaaaatgaaaacaagtaattatttaggggaccaaa 293  Q
    ||||| |||||||||||||||| | |||||||||||||||||||    
T  61906 ttatgagaccaaaatgaaaacatgaaattatttaggggaccaaa 61863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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