View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16591_low_13 (Length: 223)
Name: NF16591_low_13
Description: NF16591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16591_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 44131405 - 44131610
Alignment:
| Q |
1 |
acattcatcggagatcatcaattgctagaataatatcagaggtatctttgtcaggtaattctacaaagaagccatcctcctcttctatgtcagacttcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
44131405 |
acattcatcggagatcatcaattgctagaataatatcagaggcatctttgtcaggtaattctacagagaagccatcctcctcttctatgtcagacttcat |
44131504 |
T |
|
| Q |
101 |
aatattgaaagcttttaatgtcacaattcatcctccaaatgtgcccagaatcatggaagttttttggatgccaccacttagagattggattaaatgtaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
44131505 |
aatattgaaagcttttaatgtcacaattcatcctccaaatgcgcccagaatcatggaagttttttggatgccaccacatagagattggattaaatgtaat |
44131604 |
T |
|
| Q |
201 |
tcagat |
206 |
Q |
| |
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|||||| |
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| T |
44131605 |
tcagat |
44131610 |
T |
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