View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16591_low_6 (Length: 354)

Name: NF16591_low_6
Description: NF16591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16591_low_6
NF16591_low_6
[»] chr4 (21 HSPs)
chr4 (11-336)||(55132158-55132483)
chr4 (175-297)||(40376310-40376431)
chr4 (63-148)||(8755906-8755991)
chr4 (82-147)||(11839848-11839913)
chr4 (90-139)||(1758387-1758436)
chr4 (47-139)||(9297439-9297531)
chr4 (82-148)||(13834406-13834472)
chr4 (54-148)||(30315824-30315918)
chr4 (55-137)||(47097417-47097499)
chr4 (80-133)||(14945563-14945616)
chr4 (82-139)||(26499422-26499479)
chr4 (223-296)||(34745593-34745666)
chr4 (55-147)||(38080870-38080962)
chr4 (82-149)||(17381511-17381578)
chr4 (264-336)||(9286695-9286769)
chr4 (11-148)||(33360893-33361026)
chr4 (175-248)||(44310043-44310119)
chr4 (223-297)||(53178022-53178096)
chr4 (55-132)||(40407572-40407649)
chr4 (175-231)||(5597560-5597616)
chr4 (50-146)||(24806659-24806755)
[»] chr5 (13 HSPs)
chr5 (175-297)||(19206419-19206541)
chr5 (175-297)||(38186822-38186944)
chr5 (175-297)||(38211413-38211535)
chr5 (187-293)||(34372952-34373058)
chr5 (223-296)||(19910397-19910470)
chr5 (223-296)||(22118753-22118826)
chr5 (175-233)||(19910472-19910530)
chr5 (223-296)||(23130826-23130899)
chr5 (80-148)||(39194879-39194947)
chr5 (241-296)||(34351398-34351453)
chr5 (223-296)||(5019650-5019723)
chr5 (175-231)||(5019590-5019646)
chr5 (175-231)||(22118693-22118749)
[»] chr1 (10 HSPs)
chr1 (175-296)||(22772366-22772487)
chr1 (175-297)||(9471643-9471765)
chr1 (175-296)||(7429633-7429754)
chr1 (150-233)||(22587362-22587445)
chr1 (11-114)||(6541117-6541216)
chr1 (223-296)||(22587447-22587520)
chr1 (90-146)||(5529839-5529895)
chr1 (82-137)||(9890610-9890665)
chr1 (81-148)||(30050554-30050621)
chr1 (82-134)||(12238414-12238466)
[»] chr2 (11 HSPs)
chr2 (173-296)||(40069438-40069561)
chr2 (150-296)||(30937486-30937632)
chr2 (223-316)||(29744604-29744697)
chr2 (180-295)||(28578515-28578630)
chr2 (175-296)||(18367271-18367392)
chr2 (223-296)||(30974464-30974537)
chr2 (47-140)||(33260998-33261091)
chr2 (51-142)||(21603496-21603587)
chr2 (82-149)||(40124342-40124409)
chr2 (82-139)||(41746414-41746471)
chr2 (52-132)||(1901586-1901666)
[»] chr3 (7 HSPs)
chr3 (175-296)||(35169348-35169469)
chr3 (52-146)||(46008606-46008700)
chr3 (47-149)||(14984484-14984586)
chr3 (223-296)||(21533404-21533477)
chr3 (177-230)||(51884014-51884067)
chr3 (150-226)||(9760608-9760684)
chr3 (80-116)||(34293951-34293987)
[»] scaffold0179 (3 HSPs)
scaffold0179 (176-296)||(20712-20832)
scaffold0179 (175-233)||(20531-20589)
scaffold0179 (223-296)||(20456-20529)
[»] chr7 (12 HSPs)
chr7 (193-291)||(11403161-11403259)
chr7 (82-149)||(40355031-40355098)
chr7 (223-296)||(6051781-6051854)
chr7 (54-142)||(18942823-18942911)
chr7 (82-142)||(39608400-39608460)
chr7 (82-133)||(25689096-25689147)
chr7 (82-148)||(19303520-19303586)
chr7 (51-148)||(12927652-12927749)
chr7 (223-296)||(43311664-43311737)
chr7 (57-137)||(5198019-5198099)
chr7 (80-148)||(27080834-27080902)
chr7 (80-148)||(27197399-27197467)
[»] chr6 (8 HSPs)
chr6 (82-147)||(17848789-17848854)
chr6 (82-148)||(6524981-6525047)
chr6 (82-148)||(25085046-25085112)
chr6 (82-148)||(21021054-21021120)
chr6 (84-149)||(10219615-10219680)
chr6 (91-148)||(28995505-28995562)
chr6 (82-134)||(26293512-26293564)
chr6 (173-233)||(34286649-34286709)
[»] scaffold0430 (1 HSPs)
scaffold0430 (176-296)||(2121-2241)
[»] chr8 (14 HSPs)
chr8 (47-148)||(13002976-13003077)
chr8 (223-296)||(15347349-15347422)
chr8 (223-296)||(15436414-15436487)
chr8 (223-296)||(15527718-15527791)
chr8 (55-147)||(33590208-33590300)
chr8 (90-148)||(7680979-7681037)
chr8 (175-233)||(15347289-15347347)
chr8 (175-233)||(15436354-15436412)
chr8 (175-233)||(15527658-15527716)
chr8 (52-113)||(3662430-3662491)
chr8 (89-129)||(4493044-4493084)
chr8 (223-291)||(7911989-7912057)
chr8 (117-149)||(28929521-28929553)
chr8 (175-231)||(28962055-28962111)
[»] scaffold0252 (1 HSPs)
scaffold0252 (55-135)||(17181-17261)
[»] scaffold0029 (1 HSPs)
scaffold0029 (178-234)||(52101-52157)
[»] scaffold0014 (1 HSPs)
scaffold0014 (175-291)||(20020-20136)
[»] scaffold0534 (2 HSPs)
scaffold0534 (175-233)||(11159-11217)
scaffold0534 (223-284)||(11219-11280)
[»] scaffold0002 (1 HSPs)
scaffold0002 (47-133)||(349122-349208)


Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 11 - 336
Target Start/End: Complemental strand, 55132483 - 55132158
Alignment:
Q  11 gactgaaatgaaaataagtaagtacttttattaaatgactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtatttta 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  55132483 gactgaaatcaaaataagtaagtacttttattaaatgactaatatgacaataaataattacattaaaggattaatatggcaatattaacgaagtatttta 55132384  T
Q  111 atgtaaatgaccattttgactaacgaagtgcataatcagcactacaagaaattaggtagatagtcaggggcagaagccctgacaaattgcaaaaagcttt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| |||||||| |||||||||||||    
T  55132383 atgtaaatgaccattttgactaacgaagtgcataatcagcactacaagaaatctggtagttagtcaggggcagaagcactgacaaaatgcaaaaagcttt 55132284  T
Q  211 gtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaattgcgtggggcacat 310  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  55132283 gtcaattggacgtttgccaggagcaaaattcccagcaattcaggtcatcgcaaataaccatgccagggctttagctcctggcaaattgcgtggggcacat 55132184  T
Q  311 tccctgtacaacccctggcaactttt 336  Q
    ||| ||||||||||||| ||||||||    
T  55132183 tccttgtacaacccctgacaactttt 55132158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 40376431 - 40376310
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||||||| | ||| |||| |||| ||||| ||| ||| ||||||||||||||||||| |||  ||||||| |||| |||| |||||||| | ||||    
T  40376431 caggggcagaaactctggcaaaatgcagaaagccttg-caactggacgtttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgaacctgcc 40376333  T
Q  275 agggctttagatcctggcaaatt 297  Q
    |||||||||| ||||||||||||    
T  40376332 agggctttagctcctggcaaatt 40376310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 8755906 - 8755991
Alignment:
Q  63 aataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||| || ||||||  ||||||||| ||||||||||||||||||||||||| |  ||| ||||||| ||||||||||||||||||    
T  8755906 aataagtatattaaaggattaatatgacaatattaacgaagtattttaatgttagagactattttgattaacgaagtgcataatca 8755991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 11839913 - 11839848
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatc 147  Q
    ||||||| ||||||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||    
T  11839913 taatatgacaatattaacgaagtattttaatgtcaaggactattttgactaacgaggtgcacaatc 11839848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 1758436 - 1758387
Alignment:
Q  90 caatattaacgaagtattttaatgtaaatgaccattttgactaacgaagt 139  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  1758436 caatattaacgaagtattttaatgtcaaggactattttgactaacgaagt 1758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 9297531 - 9297439
Alignment:
Q  47 gactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagt 139  Q
    |||| |||||| ||||||||| || ||| ||  | ||||||| |||||||||| |||||||||||||| ||| || |||||||||||| ||||    
T  9297531 gactgatatgataataaataagtatatttaatgactaatatgacaatattaacaaagtattttaatgtcaataacaattttgactaacaaagt 9297439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 13834472 - 13834406
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||| |||||||||| || ||||||||||| || ||| |||||||||||| ||||||| |||||    
T  13834472 taatatgacaatattaacaaattattttaatgttaaagactattttgactaacaaagtgcacaatca 13834406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 30315824 - 30315918
Alignment:
Q  54 atgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    |||||||||||||| |||||||||  | ||||||| |||||||||||| | ||||||  || ||  |  |||||||||||||||||||| |||||    
T  30315824 atgacaataaataaatacattaaaggactaatatgacaatattaacgatgcattttagcgttaaataatattttgactaacgaagtgcacaatca 30315918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 47097417 - 47097499
Alignment:
Q  55 tgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaa 137  Q
    ||||||||||||| || ||||||  | ||||||| |||||||||  |||||||||| ||| || ||| |||||||||||||||    
T  47097417 tgacaataaataagtatattaaaggactaatatgacaatattaataaagtattttagtgttaaagactattttgactaacgaa 47097499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 14945563 - 14945616
Alignment:
Q  80 attaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaa 133  Q
    ||||||||| |||||||||| ||  ||||||||||||||||| |||||||||||    
T  14945563 attaatatgacaatattaactaatcattttaatgtaaatgactattttgactaa 14945616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 26499422 - 26499479
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagt 139  Q
    ||||||| ||||||||| ||||||||||||||| |  ||| |||||||||||||||||    
T  26499422 taatatgacaatattaatgaagtattttaatgttacggactattttgactaacgaagt 26499479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 34745666 - 34745593
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| | || |||| |||||||||  |||||||||||||| |||||||||||    
T  34745666 tttgccaggagcagaatcaccagcaaatatgctcatcgcaaatgactctgccagggctttagctcctggcaaat 34745593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 38080870 - 38080962
Alignment:
Q  55 tgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatc 147  Q
    ||||||||||||| || ||| ||  | ||||||| | |||||||| |||||||||||||| |   || ||||||||||||||| |||||||||    
T  38080870 tgacaataaataagtatattgaagtactaatatgactatattaacaaagtattttaatgttacaaactattttgactaacgaaatgcataatc 38080962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 17381511 - 17381578
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatcag 149  Q
    ||||||| ||||||||||||| ||||||||| | || ||| ||||||| |||| ||||||| ||||||    
T  17381511 taatatgacaatattaacgaaatattttaatatcaaggactattttgattaacaaagtgcacaatcag 17381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 9286769 - 9286695
Alignment:
Q  264 atgaccatgccagggctttagatcctggcaaa-ttgcgtggggcacattccct-gtacaacccctggcaactttt 336  Q
    ||||||||||||||||||||| ||||| |||| ||  |||||| ||||||||| |||||||||||  ||||||||    
T  9286769 atgaccatgccagggctttagttcctgacaaatttatgtggggtacattccctggtacaacccctatcaactttt 9286695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 33361026 - 33360893
Alignment:
Q  11 gactgaaatgaaaataagtaagtacttttattaaatgactaa-tatgacaataaataattacattaaacaattaatatggcaatattaacgaagtatttt 109  Q
    |||||| |||| |||||||||||||||     | |||||||| ||||||||||| ||| ||| |||||  | ||||||| ||||||||| | | ||||||    
T  33361026 gactgatatgataataagtaagtactt-----acatgactaaatatgacaataagtaagtacgttaaatgactaatatgacaatattaatgcaatatttt 33360932  T
Q  110 aatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    || ||||  ||| ||||| ||||||  ||||||||||||    
T  33360931 aacgtaagagacaatttttactaacatagtgcataatca 33360893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 44310043 - 44310119
Alignment:
Q  175 caggggcagaagccctg---acaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaa 248  Q
    ||||| |||||||||||   ||||| ||| |||||||||| ||| ||||||||||||||||||| |||  |||||||    
T  44310043 cagggccagaagccctggcaacaaaatgctaaaagctttggcaactggacgtttgccaggagcagaatcaccagcaa 44310119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 53178096 - 53178022
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaatt 297  Q
    ||||||| ||||| |||  ||||||| |||| |||| |||||||| | || ||||||||||| ||||||||||||    
T  53178096 tttgccaagagcagaatcaccagcaaatctgctcatcgcaaatgaacttgtcagggctttagctcctggcaaatt 53178022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 40407572 - 40407649
Alignment:
Q  55 tgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgacta 132  Q
    ||||||||| |||||| ||||||  || ||||||  ||||||||| || ||||||||||| |||| | ||||||||||    
T  40407572 tgacaataagtaattatattaaaagatcaatatgataatattaacaaattattttaatgttaatggcaattttgacta 40407649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 5597560 - 5597616
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccagg 231  Q
    ||||||||||||||||| |||| ||| |||||| ||| ||| ||||| |||||||||    
T  5597560 caggggcagaagccctggcaaaatgctaaaagccttggcaaatggacatttgccagg 5597616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 24806659 - 24806755
Alignment:
Q  50 taatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataat 146  Q
    |||||||||||||| ||| || ||| || || || |||| |||||||||| || ||||||||||| |  ||| ||||||||||| ||| | ||||||    
T  24806659 taatatgacaataagtaagtatattgaaaaactactatgacaatattaacaaattattttaatgttagagactattttgactaatgaaatacataat 24806755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 19206419 - 19206541
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||||||||||||| |||| ||| |||||| ||| ||||||||||||||||||||||| |||  ||||||| |||| || | ||||||||   ||||    
T  19206419 caggggcagaagccctggcaaaatgctaaaagccttggcaattggacgtttgccaggagcagaatcaccagcaaatctgctcgtcgcaaatgaatttgcc 19206518  T
Q  275 agggctttagatcctggcaaatt 297  Q
    |||||||||| ||||||||||||    
T  19206519 agggctttagctcctggcaaatt 19206541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 38186822 - 38186944
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||||||||||||| |||| ||| |||||| ||| |||||||||||||||||| |||| |||   |||||| |||| |||| |||||||| | ||||    
T  38186822 caggggcagaagccctggcaaaatgctaaaagccttggcaattggacgtttgccagaagcagaatcaacagcaaatctgctcatcgcaaatgaacttgcc 38186921  T
Q  275 agggctttagatcctggcaaatt 297  Q
    |||||||||| |||||| |||||    
T  38186922 agggctttagctcctggaaaatt 38186944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 38211535 - 38211413
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||||||||||||| |||| ||| |||||| ||| |||||||||||||||||| |||| |||   |||||| |||| |||| |||||||| | ||||    
T  38211535 caggggcagaagccctggcaaaatgctaaaagccttggcaattggacgtttgccagaagcagaatcaacagcaaatctgctcatcgcaaatgaacttgcc 38211436  T
Q  275 agggctttagatcctggcaaatt 297  Q
    |||||||||| |||||| |||||    
T  38211435 agggctttagctcctggaaaatt 38211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 34373058 - 34372952
Alignment:
Q  187 ccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagat 286  Q
    ||||| |||| ||| |||||||||| ||| ||||||||||||||||||| |||  ||||||| |||| |||| |||||||||  |||||||||||||| |    
T  34373058 ccctggcaaaatgccaaaagctttgacaaatggacgtttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgactctgccagggctttagct 34372959  T
Q  287 cctggca 293  Q
    |||||||    
T  34372958 cctggca 34372952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 19910470 - 19910397
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| ||| |||||| | |||| |||| |||||||||| |||||||||||||| |||||||||||    
T  19910470 tttgccaggagcagaatccccagctaatctgctcatcgcaaatgaccctgccagggctttagctcctggcaaat 19910397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 22118753 - 22118826
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| |||| ||||||||||||||  |||||| ||||||| |||||||||||    
T  22118753 tttgccaggagcagaatcaccagcaaatctgctcattgcaaatgactctgccagagctttagctcctggcaaat 22118826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 19910530 - 19910472
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    ||||||||||||||||| |||| |||| ||||| ||| ||| |||||||||||||||||    
T  19910530 caggggcagaagccctggcaaaatgcagaaagccttggcaaatggacgtttgccaggag 19910472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 23130899 - 23130826
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| |||| |||| |||||||||| || ||||| ||||| |||||||||||    
T  23130899 tttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgaccttgtcaggggtttagctcctggcaaat 23130826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 39194947 - 39194879
Alignment:
Q  80 attaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||||| |||||||||||||  |||||||||  | |||| |||||||||||| ||||||| |||||    
T  39194947 attaatatgacaatattaacgaaacattttaatggcagtgactattttgactaacaaagtgcacaatca 39194879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 34351453 - 34351398
Alignment:
Q  241 cccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    |||| |||||| |||||| ||||||||| |||||||||| |||| |||||||||||    
T  34351453 cccaacaattcaggtcatcgcaaatgactatgccagggccttagctcctggcaaat 34351398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 5019650 - 5019723
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||  |||  ||||||| |||| || | |||||||||  |||||||||||||| |||||||||||    
T  5019650 tttgccaggagctgaatcaccagcaaatctgctcgtcgcaaatgactctgccagggctttagctcctggcaaat 5019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 5019590 - 5019646
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccagg 231  Q
    ||||||||||||||||| |||| ||| ||||||  || ||| |||||||||||||||    
T  5019590 caggggcagaagccctggcaaaatgccaaaagccgtggcaaatggacgtttgccagg 5019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 22118693 - 22118749
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccagg 231  Q
    |||||||||||||||||  ||| ||| |||||| ||| ||| |||||||||||||||    
T  22118693 caggggcagaagccctggaaaaatgccaaaagccttggcaaatggacgtttgccagg 22118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 22772366 - 22772487
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||||||||||||| |||| ||| |||||| ||| ||| ||||||||||||||||||| |||  ||||||| | || |||| |||||||||| ||||    
T  22772366 caggggcagaagccctggcaaaatgctaaaagccttggcaactggacgtttgccaggagcagaatcaccagcaaatttgctcatcgcaaatgaccctgcc 22772465  T
Q  275 agggctttagatcctggcaaat 296  Q
    |||| ||||| |||||||||||    
T  22772466 aggggtttagctcctggcaaat 22772487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 9471765 - 9471643
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||| ||| | ||| |||| |||||||||| ||| ||| || ||||||| |||||||| |||  ||||||| |||| |||| |||||||||  ||||    
T  9471765 caggggcggaaacactggcaaaatgcaaaaagccttggcaaatgaacgtttgtcaggagcagaatcaccagcaaatctgctcatcgcaaatgacgttgcc 9471666  T
Q  275 agggctttagatcctggcaaatt 297  Q
    |||||||||| |||||| |||||    
T  9471665 agggctttagctcctggtaaatt 9471643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 296
Target Start/End: Original strand, 7429633 - 7429754
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||| |||||||||  ||| |||| ||||| ||| ||| || |||||||||||||||| |||  ||||||| | ||  ||| ||||||||  ||| |    
T  7429633 caggggcggaagccctggaaaaatgcagaaagccttggcaaatgcacgtttgccaggagcagaatcaccagcaaatatgcccatcgcaaatgaaaatgtc 7429732  T
Q  275 agggctttagatcctggcaaat 296  Q
    |||||||||| |||||||||||    
T  7429733 agggctttagctcctggcaaat 7429754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 22587362 - 22587445
Alignment:
Q  150 cactacaagaaattaggtagatagtcaggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    |||||||||||||  ||||  | | ||||||| ||||||||| |||| |||||||||| ||| ||| |||||||||||||||||    
T  22587362 cactacaagaaatctggtaatttgccaggggcggaagccctggcaaaatgcaaaaagccttggcaaatggacgtttgccaggag 22587445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 6541216 - 6541117
Alignment:
Q  11 gactgaaatgaaaataagtaagtacttttattaaatgactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtatttta 110  Q
    ||||||||||| ||||||||||||  ||||| ||  |||| |||||||||||| ||| || ||| ||  | ||||||| ||||||||||||| |||||||    
T  6541216 gactgaaatgacaataagtaagta--tttataaa--gactgatatgacaataagtaagtatattgaaggactaatatgacaatattaacgaaatatttta 6541121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 22587447 - 22587520
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| |||| |||| |||||||| | |||||||| ||||| |||||||||||    
T  22587447 tttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgatcctgccaggggtttagctcctggcaaat 22587520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 5529839 - 5529895
Alignment:
Q  90 caatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataat 146  Q
    ||||||||||||||||||||||||| |   || |||||||||||| |||||||||||    
T  5529839 caatattaacgaagtattttaatgtcagaaactattttgactaacaaagtgcataat 5529895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 9890665 - 9890610
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaa 137  Q
    ||||||| |||||||||||||||||| |||||| || ||  |||||||||||||||    
T  9890665 taatatgacaatattaacgaagtattctaatgttaaggattattttgactaacgaa 9890610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 30050554 - 30050621
Alignment:
Q  81 ttaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    |||||||| ||||||||||||  ||||||||||| |  ||| |||||||||||| || ||||||||||    
T  30050554 ttaatatgtcaatattaacgagatattttaatgtgagagactattttgactaacaaattgcataatca 30050621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 12238466 - 12238414
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaac 134  Q
    ||||||| |||||||||||||  ||||||| | ||||||| ||||||||||||    
T  12238466 taatatgacaatattaacgaaacattttaacgcaaatgactattttgactaac 12238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 40069438 - 40069561
Alignment:
Q  173 gtcaggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatg 272  Q
    |||||||||||||| |||| |||| |||| ||||| ||| ||||||||| ||||||||||||| |||  ||||||| |||| |||| |||||||| | ||    
T  40069438 gtcaggggcagaagtcctggcaaaatgcagaaagccttggcaattggacatttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgaacctg 40069537  T
Q  273 ccagggctttagatcctggcaaat 296  Q
     |||||||| || |||||||||||    
T  40069538 tcagggcttaagctcctggcaaat 40069561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 296
Target Start/End: Complemental strand, 30937632 - 30937486
Alignment:
Q  150 cactacaagaaattaggtagatagtcaggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaat 249  Q
    |||||||||||||  ||||  | | ||||||||||||||||  |||| |||| ||||| ||| ||| ||||||||||||||||||| |||  |||||||     
T  30937632 cactacaagaaatctggtaatttgccaggggcagaagccctagcaaaatgcataaagccttggcaaatggacgtttgccaggagcagaatcaccagcaaa 30937533  T
Q  250 tctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    |||| |||| |||||||| | | |||||| ||||| |||||| ||||    
T  30937532 tctgctcatcgcaaatgatcctaccaggggtttagctcctggaaaat 30937486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 316
Target Start/End: Original strand, 29744604 - 29744697
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaattgcgtggggcacattccctg 316  Q
    |||||| |||| | ||| |||| |||||| |||||| | ||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  29744604 tttgccgggagaacaatccccaacaattcaggtcatcggaaatgaccatgtcagggctttagctcctggcaaattgtgtggggtacattccctg 29744697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 28578630 - 28578515
Alignment:
Q  180 gcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggc 279  Q
    |||||||||||| |||| |||| ||||  ||| ||| ||||||||  ||||||| |||||  ||||||| |||| ||||  ||||||||  |||||||||    
T  28578630 gcagaagccctggcaaaatgcagaaagtcttggcaactggacgttccccaggagtaaaatcaccagcaaatctgctcatcacaaatgactctgccagggc 28578531  T
Q  280 tttagatcctggcaaa 295  Q
    ||||| ||||||||||    
T  28578530 tttagctcctggcaaa 28578515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 18367392 - 18367271
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||||||||||| | |||| |||| ||||  ||| ||| || |||||||||||||||| |||  ||||||| | || |||| |||||||| | | ||    
T  18367392 caggggcagaagccccggcaaaatgcagaaagtcttggcaaatgtacgtttgccaggagcagaatcaccagcaaatttgctcatcgcaaatgatcctacc 18367293  T
Q  275 agggctttagatcctggcaaat 296  Q
    |||| ||||| |||||||||||    
T  18367292 aggggtttagctcctggcaaat 18367271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 30974464 - 30974537
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| ||| || ||| | |||| |||| |||||||||| |||||||||||||| |||||||||||    
T  30974464 tttgccaggagcagaatccctagctaatctgctcatcgcaaatgaccctgccagggctttagctcctggcaaat 30974537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 33261091 - 33260998
Alignment:
Q  47 gactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtg 140  Q
    |||| ||||||| || ||||| || ||| || || ||||||| |||||| |||||| ||||||| ||| || ||| ||||||||||||||||||    
T  33261091 gactgatatgactatgaataagtatattgaagaaataatatgacaatatcaacgaaatattttactgtcaaagactattttgactaacgaagtg 33260998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 21603587 - 21603496
Alignment:
Q  51 aatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgca 142  Q
    ||||||||||||| ||| |  ||| || || ||| ||| ||||||||||||| ||||||||| | || ||| |||||||||||| |||||||    
T  21603587 aatatgacaataactaagtctattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgactaacaaagtgca 21603496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 40124409 - 40124342
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatcag 149  Q
    ||||||| ||||||||| |||||| |||||||| |  ||| ||||||||||||| |||||| ||||||    
T  40124409 taatatgacaatattaatgaagtactttaatgttatggactattttgactaacggagtgcacaatcag 40124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 41746471 - 41746414
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagt 139  Q
    ||||||| ||||||||| ||||||||||||||| |  ||| ||||||| |||||||||    
T  41746471 taatatgacaatattaatgaagtattttaatgttagagactattttgaataacgaagt 41746414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 1901666 - 1901586
Alignment:
Q  52 atatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgacta 132  Q
    |||||||||||||||| || ||| || |||||||||| |||||||||  ||||  |||||||| | |||| ||||| ||||    
T  1901666 atatgacaataaataaatatattgaaaaattaatatgacaatattaataaagtgatttaatgtcattgactattttaacta 1901586  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 35169469 - 35169348
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    |||||||||||| |||| |||| ||| |||||| ||| ||| |||||||||||||||||   |||  ||||||| |||| |||| |||||||||  ||||    
T  35169469 caggggcagaagtcctggcaaaatgctaaaagccttggcaaatggacgtttgccaggagttgaatcaccagcaaatctgctcatcgcaaatgactctgcc 35169370  T
Q  275 agggctttagatcctggcaaat 296  Q
    |||||||||| |||||||||||    
T  35169369 agggctttagctcctggcaaat 35169348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 46008700 - 46008606
Alignment:
Q  52 atatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataat 146  Q
    |||||||||||||||| || ||||||  ||||||||| ||||||||||||| ||||||||||| || ||| ||||| |||||| || ||||||||    
T  46008700 atatgacaataaataagtatattaaaagattaatatgacaatattaacgaattattttaatgttaaagactattttaactaacaaaatgcataat 46008606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 14984586 - 14984484
Alignment:
Q  47 gactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataat 146  Q
    |||| ||||||||||||  || || ||| ||  ||||||||| ||||||||||||| ||||||||||| |   || |||||||||||||||||||| |||    
T  14984586 gactcatatgacaataagcaagtatattgaaggattaatatgacaatattaacgaaatattttaatgtcaggaactattttgactaacgaagtgcacaat 14984487  T
Q  147 cag 149  Q
    |||    
T  14984486 cag 14984484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 21533477 - 21533404
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| | || |||| |||||||||  |||||||||||||| |||||||||||    
T  21533477 tttgccaggagcagaatcaccagcaaatatgctcatcgcaaatgactctgccagggctttagctcctggcaaat 21533404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 51884014 - 51884067
Alignment:
Q  177 ggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccag 230  Q
    |||||||||||||||||||| |||| ||||| ||| | | ||||||||||||||    
T  51884014 ggggcagaagccctgacaaaatgcagaaagccttggctactggacgtttgccag 51884067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 9760608 - 9760684
Alignment:
Q  150 cactacaagaaattaggtagatagtcaggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttg 226  Q
    |||||||||||||  ||||  | | ||||||||||||||||| |||| |||| ||||| ||| ||| ||||||||||    
T  9760608 cactacaagaaatctggtaatttgccaggggcagaagccctggcaaaatgcagaaagccttggcaaatggacgtttg 9760684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 34293987 - 34293951
Alignment:
Q  80 attaatatggcaatattaacgaagtattttaatgtaa 116  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  34293987 attaatatgacaatattaacgaagtattttattgtaa 34293951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 296
Target Start/End: Original strand, 20712 - 20832
Alignment:
Q  176 aggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcca 275  Q
    ||||||||| | |||| |||| ||| |||||| ||| ||| ||||||||||| ||||||| |||  ||||||| |||| |||| |||||||||| |||||    
T  20712 aggggcagacgtcctgtcaaaatgctaaaagccttggcaactggacgtttgctaggagcagaatcaccagcaaatctgctcatcgcaaatgaccctgcca 20811  T
Q  276 gggctttagatcctggcaaat 296  Q
    ||| ||||| |||||||||||    
T  20812 ggggtttagctcctggcaaat 20832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 20589 - 20531
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    ||||||||||||||||| |||| ||| |||||| ||| ||| |||||||||||||||||    
T  20589 caggggcagaagccctggcaaaatgctaaaagccttggcaactggacgtttgccaggag 20531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 20529 - 20456
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| |||| |||| ||||||||||  ||||||| ||||| |||||||||||    
T  20529 tttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgacccagccaggggtttagctcctggcaaat 20456  T

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Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 11403259 - 11403161
Alignment:
Q  193 caaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctgg 291  Q
    |||| |||| ||||||||| ||| ||||||||||||||| ||| ||| |||| |||||| |||||| |||||||||||| ||| |||||||| ||||||    
T  11403259 caaaatgcagaaagctttggcaaatggacgtttgccaggggcataatccccaacaattcaggtcatcgcaaatgaccattccaaggctttagctcctgg 11403161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 40355031 - 40355098
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatcag 149  Q
    ||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||  |||||| ||||||    
T  40355031 taatatgacaatattaatgaagtgttttaatgtaaatgactattttgactaacatagtgcacaatcag 40355098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 6051781 - 6051854
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| |||| |||| |||||||| |||| ||||||||||| |||||||||||    
T  6051781 tttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgaacatgtcagggctttagctcctggcaaat 6051854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 18942911 - 18942823
Alignment:
Q  54 atgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgca 142  Q
    |||||||||| ||| || ||| ||  ||||||||| |||||||||||| |||||||||||| |  ||| |||| |||||||||| ||||    
T  18942911 atgacaataagtaagtatattgaatgattaatatgacaatattaacgacgtattttaatgttagagactatttggactaacgaaatgca 18942823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 39608460 - 39608400
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgca 142  Q
    ||||||| |||||||||  |||||||||||||||| | || ||||| ||||||||||||||    
T  39608460 taatatgacaatattaatcaagtattttaatgtaagtaactattttaactaacgaagtgca 39608400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 25689096 - 25689147
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaa 133  Q
    ||||||| |||||||||||||||||| |||||| |||||  |||||||||||    
T  25689096 taatatgacaatattaacgaagtattctaatgttaatgattattttgactaa 25689147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 19303520 - 19303586
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||| |||||||||| || |||| |||||| |||||  |||||||||||||||||  |||||||    
T  19303520 taatatgacaatattaacaaaatattctaatgttaatgattattttgactaacgaagttaataatca 19303586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 12927749 - 12927652
Alignment:
Q  51 aatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||||||||| ||| |  ||| || || ||| ||| |||||||||| || ||||||||| | || ||| |||||||||||| ||||||| |||||    
T  12927749 aatatgacaataactaagtctattgaagaactaacatgacaatattaacaaaatattttaatatgaaggactattttgactaacaaagtgcacaatca 12927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 43311664 - 43311737
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    ||||||||||||| |||  ||||||| | || |||| |||||||||  ||||| |||||||| |||||||||||    
T  43311664 tttgccaggagcagaatcaccagcaaatatgctcatcgcaaatgactctgccaaggctttagctcctggcaaat 43311737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 5198019 - 5198099
Alignment:
Q  57 acaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaa 137  Q
    ||||||||||| || ||| ||  | ||||||| ||||||||| ||||||||||||||| |  ||  |||||||||||||||    
T  5198019 acaataaataagtatattgaaagactaatatgacaatattaatgaagtattttaatgttagagattattttgactaacgaa 5198099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 27080902 - 27080834
Alignment:
Q  80 attaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    |||||||||  |||||||| ||||||||||||||| |  ||| |||||||||| || |||||| |||||    
T  27080902 attaatatgataatattaaagaagtattttaatgttatggactattttgactagcgtagtgcacaatca 27080834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 27197399 - 27197467
Alignment:
Q  80 attaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    |||||||||  |||||||| ||||||||||||||| |  ||| |||||||||| || |||||| |||||    
T  27197399 attaatatgataatattaaagaagtattttaatgttatggactattttgactagcgtagtgcacaatca 27197467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 17848789 - 17848854
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatc 147  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||||||||||||| |||| ||||    
T  17848789 taatatgtcaatattaacgaagtattttaatgttaaagactattttgactaacgaaatgcacaatc 17848854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 6524981 - 6525047
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||| ||||||||| ||||||||||||||| |  ||| |||||||| ||||||||| |||||||    
T  6524981 taatatgacaatattaatgaagtattttaatgttacggactattttgacaaacgaagtgtataatca 6525047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 25085046 - 25085112
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||| |||||||||| || ||||||||||| || ||| |||||||||||| ||||||| |||||    
T  25085046 taatatgacaatattaacaaattattttaatgttaaagactattttgactaacaaagtgcacaatca 25085112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 21021054 - 21021120
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    |||||||  |||| ||||||| ||||||||||| |||||| |||||||||||  || ||||||||||    
T  21021054 taatatgataataataacgaaatattttaatgttaatgactattttgactaataaaatgcataatca 21021120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 10219680 - 10219615
Alignment:
Q  84 atatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatcag 149  Q
    ||||| ||||||||||||| |||||||| || |  ||| |||||||||||| ||||||| ||||||    
T  10219680 atatgacaatattaacgaattattttaacgtcagagactattttgactaacaaagtgcacaatcag 10219615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 28995505 - 28995562
Alignment:
Q  91 aatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    |||||||||||||||||||||||| |   || |||||||||||||||||  |||||||    
T  28995505 aatattaacgaagtattttaatgttagaaactattttgactaacgaagtaaataatca 28995562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 26293512 - 26293564
Alignment:
Q  82 taatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaac 134  Q
    |||||||  ||||||||| |||||||||||||| || ||| ||||||||||||    
T  26293512 taatatgataatattaacaaagtattttaatgttaaggactattttgactaac 26293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 34286709 - 34286649
Alignment:
Q  173 gtcaggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    ||||||||  ||||||||| |||| |||| ||||| ||| ||| |||||||||||||||||    
T  34286709 gtcaggggtggaagccctggcaaaatgcagaaagccttggcaaatggacgtttgccaggag 34286649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 296
Target Start/End: Complemental strand, 2241 - 2121
Alignment:
Q  176 aggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcca 275  Q
    |||||||||||||||| |||| ||| |||||| ||| ||| ||||||||||||| ||| | |||  | ||||| |||| ||||  ||||||| | || ||    
T  2241 aggggcagaagccctggcaaaatgctaaaagccttggcaactggacgtttgccaagagtagaatcactagcaaatctgctcatcacaaatgaacctgtca 2142  T
Q  276 gggctttagatcctggcaaat 296  Q
    ||||||||| || ||||||||    
T  2141 gggctttagctcatggcaaat 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 13003077 - 13002976
Alignment:
Q  47 gactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataat 146  Q
    ||||||||||||||||| ||| ||||||||   ||||||||  ||||||||| | |  ||||||||||||   || ||||||||||||  ||||||||||    
T  13003077 gactaatatgacaataagtaagtacattaagggattaatataacaatattaatgcaacattttaatgtaagaaacaattttgactaacatagtgcataat 13002978  T
Q  147 ca 148  Q
    ||    
T  13002977 ca 13002976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 15347349 - 15347422
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    |||| |||||||| |||  ||||||| |||| |||| |||||||||| |||||||| ||||| |||||||||||    
T  15347349 tttgtcaggagcagaatcaccagcaaatctgctcatcgcaaatgaccctgccagggatttagctcctggcaaat 15347422  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 15436414 - 15436487
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    |||| |||||||| |||  ||||||| |||| |||| |||||||||| |||||||| ||||| |||||||||||    
T  15436414 tttgtcaggagcagaatcaccagcaaatctgctcatcgcaaatgaccctgccagggatttagctcctggcaaat 15436487  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 15527718 - 15527791
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctggcaaat 296  Q
    |||| |||||||| |||  ||||||| |||| |||| |||||||||| |||||||| ||||| |||||||||||    
T  15527718 tttgtcaggagcagaatcaccagcaaatctgctcatcgcaaatgaccctgccagggatttagctcctggcaaat 15527791  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 33590208 - 33590300
Alignment:
Q  55 tgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatc 147  Q
    ||||||||| |||||| ||| || |||  ||||| ||||||||||||||||||||||||| |  ||  |||||||||||| || || ||||||    
T  33590208 tgacaataattaattatattgaagaatcgatatgacaatattaacgaagtattttaatgttagggattattttgactaacaaaatgtataatc 33590300  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 7680979 - 7681037
Alignment:
Q  90 caatattaacgaagtattttaatgtaaatgaccattttgactaacgaagtgcataatca 148  Q
    ||||||||||||| ||||||||||| |  ||| ||||||||||||||| |||| |||||    
T  7680979 caatattaacgaattattttaatgttagggacgattttgactaacgaaatgcacaatca 7681037  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 15347289 - 15347347
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    |||||||||||||| || |||| |||| ||||| ||| ||| |||||||||||||||||    
T  15347289 caggggcagaagccttggcaaaatgcagaaagccttggcaaatggacgtttgccaggag 15347347  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 15436354 - 15436412
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    |||||||||||||| || |||| |||| ||||| ||| ||| |||||||||||||||||    
T  15436354 caggggcagaagccttggcaaaatgcagaaagccttggcaaatggacgtttgccaggag 15436412  T

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Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 15527658 - 15527716
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    |||||||||||||| || |||| |||| ||||| ||| ||| |||||||||||||||||    
T  15527658 caggggcagaagccttggcaaaatgcagaaagccttggcaaatggacgtttgccaggag 15527716  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 3662491 - 3662430
Alignment:
Q  52 atatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatg 113  Q
    |||||||||||| ||| || |||||| || ||||||| |||||||||| || ||||||||||    
T  3662491 atatgacaataagtaagtatattaaagaactaatatgacaatattaacaaattattttaatg 3662430  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 4493084 - 4493044
Alignment:
Q  89 gcaatattaacgaagtattttaatgtaaatgaccattttga 129  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  4493084 gcaatattaacaaagtattttaatgtcaatgactattttga 4493044  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 7911989 - 7912057
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttagatcctgg 291  Q
    ||||||||| || |||| || |||||  | |||||| |||||| |||||||||||||||||| ||||||    
T  7911989 tttgccaggggcgaaatccctagcaaagcaggtcatcgcaaataaccatgccagggctttagctcctgg 7912057  T

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Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 28929521 - 28929553
Alignment:
Q  117 atgaccattttgactaacgaagtgcataatcag 149  Q
    ||||| |||||||||||||||||||||||||||    
T  28929521 atgactattttgactaacgaagtgcataatcag 28929553  T

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Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 28962111 - 28962055
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccagg 231  Q
    ||||||||||||||||| |||| ||| ||||||  || ||| |||||||||||||||    
T  28962111 caggggcagaagccctggcaaaatgccaaaagccgtggcaaatggacgtttgccagg 28962055  T

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Target: scaffold0252 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 17261 - 17181
Alignment:
Q  55 tgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaacg 135  Q
    ||||||||||||| || ||| ||  | || |||| ||||||||||||||||||||||||| |  ||| |||||||||||||    
T  17261 tgacaataaataagtatattgaaatactagtatgacaatattaacgaagtattttaatgttatggactattttgactaacg 17181  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 52101 - 52157
Alignment:
Q  178 gggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagc 234  Q
    |||| ||||||||||||||||||| ||||| ||| ||| || |||||||||||||||    
T  52101 gggcggaagccctgacaaattgcagaaagccttggcaaatgcacgtttgccaggagc 52157  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 20136 - 20020
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgcc 274  Q
    ||||||| |||||| ||  ||||| || ||||| ||| ||  || |||||||||||||||| |||  ||||||| | ||  ||| |||||| ||||||||    
T  20136 caggggcggaagccttggaaaattacagaaagccttggcagatgcacgtttgccaggagcataatcaccagcaaatatgcccatcgcaaattaccatgcc 20037  T
Q  275 agggctttagatcctgg 291  Q
    |||||||||| ||||||    
T  20036 agggctttagctcctgg 20020  T

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Target: scaffold0534 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 11159 - 11217
Alignment:
Q  175 caggggcagaagccctgacaaattgcaaaaagctttgtcaattggacgtttgccaggag 233  Q
    |||||||||||||| || |||| ||| |||||| ||| ||| |||||||||||||||||    
T  11159 caggggcagaagccttggcaaaatgctaaaagccttggcaaatggacgtttgccaggag 11217  T

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Target: scaffold0534; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 11219 - 11280
Alignment:
Q  223 tttgccaggagcaaaattcccagcaattctggtcattgcaaatgaccatgccagggctttag 284  Q
    ||||||||||||| |||  ||||||| |||| |||| |||||||||  ||||||||||||||    
T  11219 tttgccaggagcagaatcaccagcaaatctgctcatcgcaaatgactctgccagggctttag 11280  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 349122 - 349208
Alignment:
Q  47 gactaatatgacaataaataattacattaaacaattaatatggcaatattaacgaagtattttaatgtaaatgaccattttgactaa 133  Q
    ||||||||||||||||| ||| |  ||| || || ||| ||| ||||||||||||| ||||||||| | || ||| |||||||||||    
T  349122 gactaatatgacaataactaagtctattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgactaa 349208  T

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