View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16592_high_48 (Length: 362)

Name: NF16592_high_48
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16592_high_48
NF16592_high_48
[»] chr7 (31 HSPs)
chr7 (163-345)||(10467118-10467302)
chr7 (69-116)||(10466878-10466925)
chr7 (37-72)||(20544096-20544131)
chr7 (163-220)||(5833043-5833101)
chr7 (174-215)||(39458557-39458599)
chr7 (162-215)||(44941414-44941468)
chr7 (156-212)||(36593636-36593693)
chr7 (156-215)||(32896459-32896519)
chr7 (178-220)||(19599146-19599189)
chr7 (178-220)||(4047787-4047829)
chr7 (178-220)||(20085776-20085818)
chr7 (175-220)||(22267582-22267628)
chr7 (182-220)||(36755016-36755054)
chr7 (182-220)||(36760813-36760851)
chr7 (176-220)||(1285084-1285129)
chr7 (164-220)||(1399163-1399220)
chr7 (187-220)||(7946687-7946720)
chr7 (176-220)||(9819564-9819609)
chr7 (164-220)||(10236908-10236965)
chr7 (176-220)||(10721489-10721534)
chr7 (164-220)||(21105604-21105661)
chr7 (168-220)||(21164765-21164818)
chr7 (45-74)||(22948746-22948775)
chr7 (180-220)||(29461840-29461881)
chr7 (168-220)||(44558781-44558834)
chr7 (177-220)||(3948055-3948099)
chr7 (160-196)||(6768706-6768742)
chr7 (30-74)||(10466620-10466664)
chr7 (173-220)||(21751638-21751686)
chr7 (281-345)||(31078486-31078550)
chr7 (164-215)||(48837873-48837925)
[»] chr1 (33 HSPs)
chr1 (227-335)||(26515711-26515816)
chr1 (162-220)||(19396192-19396251)
chr1 (162-220)||(24631840-24631899)
chr1 (163-220)||(23460478-23460535)
chr1 (164-211)||(9872108-9872156)
chr1 (156-215)||(30248060-30248120)
chr1 (177-220)||(40618911-40618955)
chr1 (178-220)||(1854270-1854313)
chr1 (20-74)||(5172911-5172966)
chr1 (178-220)||(6000160-6000203)
chr1 (201-267)||(25942693-25942760)
chr1 (160-199)||(28979275-28979314)
chr1 (168-218)||(30433515-30433566)
chr1 (178-220)||(47719124-47719167)
chr1 (178-220)||(49868012-49868055)
chr1 (179-220)||(3431331-3431373)
chr1 (167-220)||(12852208-12852262)
chr1 (179-220)||(29935984-29936026)
chr1 (167-220)||(41974762-41974816)
chr1 (178-211)||(10385299-10385332)
chr1 (168-220)||(28039867-28039920)
chr1 (179-220)||(33437656-33437697)
chr1 (160-201)||(34808562-34808603)
chr1 (164-201)||(42416824-42416861)
chr1 (37-74)||(42723135-42723172)
chr1 (173-220)||(8153136-8153184)
chr1 (164-215)||(18056719-18056771)
chr1 (31-74)||(19895668-19895712)
chr1 (162-225)||(28832172-28832236)
chr1 (173-220)||(37014191-37014239)
chr1 (180-215)||(41972749-41972785)
chr1 (234-332)||(50399883-50399983)
chr1 (164-196)||(52853033-52853065)
[»] chr6 (15 HSPs)
chr6 (160-220)||(30639425-30639486)
chr6 (230-327)||(10385331-10385430)
chr6 (178-220)||(5340081-5340123)
chr6 (182-220)||(10018401-10018439)
chr6 (167-220)||(1989049-1989102)
chr6 (162-216)||(3373382-3373437)
chr6 (172-211)||(12735153-12735192)
chr6 (167-201)||(1874963-1874997)
chr6 (167-220)||(9311936-9311990)
chr6 (164-220)||(1918461-1918518)
chr6 (164-220)||(15291693-15291750)
chr6 (167-220)||(28987878-28987931)
chr6 (164-220)||(35110055-35110112)
chr6 (173-220)||(331898-331946)
chr6 (156-215)||(10497147-10497207)
[»] chr5 (26 HSPs)
chr5 (162-220)||(3156535-3156594)
chr5 (162-220)||(11017177-11017236)
chr5 (162-215)||(11647203-11647257)
chr5 (164-220)||(31545872-31545929)
chr5 (160-220)||(40445984-40446045)
chr5 (163-220)||(42854322-42854379)
chr5 (178-220)||(20258546-20258589)
chr5 (179-220)||(2642781-2642823)
chr5 (178-220)||(5015282-5015324)
chr5 (159-220)||(6237717-6237779)
chr5 (182-220)||(14951676-14951714)
chr5 (162-215)||(17145349-17145403)
chr5 (283-345)||(36855263-36855325)
chr5 (164-220)||(5107248-5107305)
chr5 (162-210)||(16752503-16752552)
chr5 (176-220)||(17046335-17046380)
chr5 (179-215)||(31198715-31198752)
chr5 (156-201)||(36683465-36683510)
chr5 (167-214)||(3389169-3389217)
chr5 (46-74)||(3935561-3935589)
chr5 (173-220)||(7713533-7713581)
chr5 (160-211)||(11844437-11844489)
chr5 (178-225)||(19068456-19068504)
chr5 (20-72)||(26392148-26392200)
chr5 (290-326)||(38444850-38444886)
chr5 (161-220)||(43108570-43108630)
[»] chr3 (22 HSPs)
chr3 (162-220)||(35126270-35126329)
chr3 (164-220)||(5702181-5702237)
chr3 (162-220)||(17588363-17588422)
chr3 (162-215)||(14771337-14771391)
chr3 (163-220)||(22486684-22486742)
chr3 (160-221)||(39869806-39869868)
chr3 (164-221)||(54230102-54230160)
chr3 (158-222)||(43815515-43815580)
chr3 (164-220)||(53681880-53681937)
chr3 (164-216)||(26610496-26610548)
chr3 (20-74)||(25770589-25770644)
chr3 (164-211)||(48688125-48688172)
chr3 (178-225)||(48849780-48849827)
chr3 (164-221)||(21914074-21914132)
chr3 (167-215)||(2078246-2078295)
chr3 (176-220)||(10922323-10922368)
chr3 (176-220)||(19883088-19883133)
chr3 (164-220)||(27397615-27397672)
chr3 (164-201)||(30200847-30200884)
chr3 (160-224)||(51505870-51505935)
chr3 (176-220)||(51882215-51882260)
chr3 (20-67)||(131985-132033)
[»] chr4 (27 HSPs)
chr4 (227-273)||(39079085-39079131)
chr4 (178-220)||(20096287-20096330)
chr4 (162-220)||(21052558-21052617)
chr4 (162-220)||(23673102-23673160)
chr4 (162-220)||(38416058-38416117)
chr4 (178-220)||(55430597-55430640)
chr4 (163-220)||(30380531-30380589)
chr4 (176-220)||(8027412-8027457)
chr4 (178-225)||(56204943-56204991)
chr4 (20-74)||(5544951-5545006)
chr4 (162-220)||(51002288-51002347)
chr4 (20-74)||(51906687-51906742)
chr4 (167-220)||(3299100-3299154)
chr4 (178-220)||(5520134-5520176)
chr4 (164-221)||(12058319-12058377)
chr4 (167-220)||(43034348-43034402)
chr4 (167-220)||(43155080-43155134)
chr4 (178-220)||(44200573-44200615)
chr4 (21-74)||(7118034-7118087)
chr4 (164-220)||(19908693-19908750)
chr4 (164-220)||(44221448-44221505)
chr4 (156-220)||(50442743-50442807)
chr4 (31-74)||(3296722-3296766)
chr4 (164-196)||(6520097-6520129)
chr4 (164-196)||(9990292-9990324)
chr4 (173-224)||(24063220-24063272)
chr4 (156-220)||(25978319-25978383)
[»] chr8 (17 HSPs)
chr8 (162-221)||(8984495-8984555)
chr8 (158-219)||(1230658-1230720)
chr8 (162-210)||(9067093-9067142)
chr8 (167-219)||(42575968-42576021)
chr8 (173-225)||(12674877-12674929)
chr8 (179-221)||(989595-989638)
chr8 (178-220)||(6447190-6447233)
chr8 (178-220)||(7553680-7553723)
chr8 (20-74)||(21005889-21005944)
chr8 (178-220)||(37999437-37999480)
chr8 (179-220)||(37938496-37938538)
chr8 (162-208)||(45396578-45396624)
chr8 (178-218)||(7869658-7869699)
chr8 (167-215)||(8442493-8442542)
chr8 (176-220)||(23816791-23816836)
chr8 (167-215)||(24212162-24212211)
chr8 (156-220)||(33445571-33445636)
[»] chr2 (25 HSPs)
chr2 (171-220)||(18041186-18041235)
chr2 (164-220)||(27152354-27152411)
chr2 (171-218)||(22267516-22267564)
chr2 (161-220)||(34364495-34364555)
chr2 (162-212)||(231594-231645)
chr2 (20-74)||(2606524-2606579)
chr2 (175-220)||(11839697-11839743)
chr2 (163-220)||(36547237-36547295)
chr2 (167-220)||(40967377-40967431)
chr2 (167-220)||(43117196-43117250)
chr2 (164-220)||(2256972-2257029)
chr2 (20-72)||(7083689-7083742)
chr2 (176-220)||(18324909-18324954)
chr2 (164-220)||(27935057-27935114)
chr2 (176-220)||(28771583-28771628)
chr2 (163-211)||(31156823-31156872)
chr2 (178-222)||(35685078-35685123)
chr2 (164-220)||(35727438-35727495)
chr2 (164-220)||(37320520-37320577)
chr2 (178-221)||(5168596-5168640)
chr2 (163-199)||(12619367-12619403)
chr2 (46-74)||(21267257-21267285)
chr2 (176-215)||(22359011-22359051)
chr2 (178-221)||(30978362-30978406)
chr2 (180-220)||(44558007-44558047)
[»] scaffold0007 (1 HSPs)
scaffold0007 (179-224)||(221031-221077)
[»] scaffold0122 (1 HSPs)
scaffold0122 (167-219)||(31161-31214)
[»] scaffold0001 (1 HSPs)
scaffold0001 (168-220)||(505012-505064)


Alignment Details
Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 163 - 345
Target Start/End: Original strand, 10467118 - 10467302
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcataagataactaagttgtagttaaatatatacacaatggttc 261  Q
    ||||||||| |||| |||||| |||||||||||||||| ||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||     
T  10467118 attcgaaccccaaaccttgcaaatattatgcattatccctaccaactgatctaaactcatgggataactaagttgtagttaaatatatacacaatggttt 10467217  T
Q  262 aaatatgatttt-atctacgacaaataagcatttacctatgaataatacataatttacaacaaaattattgtcttatagactttt 345  Q
    | |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10467218 agatatgatttttatctacggcaaataaacatttacctatgaataatacataatttacaacaaaattgttgtcttataaactttt 10467302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 10466878 - 10466925
Alignment:
Q  69 aatagtgagacaaaagtttacatgagcaaggtgaggtgaaaaatcaac 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10466878 aatagtgagacaaaagcttacatgagcaaggtgaggtgaaaaatcaac 10466925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 20544096 - 20544131
Alignment:
Q  37 tttttgttcctacattttgcatgactttgaagaata 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  20544096 tttttgttcctacattttgcatgactttgaagaata 20544131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 5833101 - 5833043
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||| ||||    
T  5833101 attcgaaccacaaatattgcatatattatgcattatccctaccaactgagctaagctca 5833043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 39458557 - 39458599
Alignment:
Q  174 aaatcttgcatatattatgcattat-cctaccaactgagttaa 215  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  39458557 aaatcttgcatatattatgcattatccctaccaactgagttaa 39458599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 44941414 - 44941468
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaa 215  Q
    |||| |||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  44941414 gatttgaaccttaaaccttgcatatattatgcattatccctaccaactgagttaa 44941468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 36593693 - 36593636
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagt 212  Q
    |||||||||||||||| |||| |||||||||||||| |||||| || |||||||||||    
T  36593693 gtctgagattcgaaccacaaaccttgcatatattattcattatcccaaccaactgagt 36593636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 32896459 - 32896519
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    ||||||| |||||||| ||||||||| |||||||||||||| ||| | |||||||||||||    
T  32896459 gtctgaggttcgaaccccaaatcttgtatatattatgcattgtccttcccaactgagttaa 32896519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 19599189 - 19599146
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  19599189 cttgcatatattatgcattgtccataccaactgagttaaactca 19599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 4047829 - 4047787
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||    
T  4047829 cttgcatatattatgcattatcctatcaactgagctaagctca 4047787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 20085776 - 20085818
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||||||||| || |||| |||||||||||||||    
T  20085776 cttgcatatattatgcattgtcttaccgactgagttaaactca 20085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 22267628 - 22267582
Alignment:
Q  175 aatcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||    
T  22267628 aatcttacatatattatgcattgtctctaccaactgagttaaactca 22267582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 36755054 - 36755016
Alignment:
Q  182 catatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36755054 catatattatgcattgtcctaccaactgagttaagctca 36755016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 36760851 - 36760813
Alignment:
Q  182 catatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  36760851 catatattatgcattgtcctaccaactgagttaagctca 36760813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 1285084 - 1285129
Alignment:
Q  176 atcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||    
T  1285084 atcttgcatatattatgcattgttcctatcaactgagttaaactca 1285129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 1399220 - 1399163
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||| |||| | ||||||||||| ||||||| ||| ||||||||||||||||||||    
T  1399220 ttcgaatctcagaccttgcatatatcatgcattgtccataccaactgagttaaactca 1399163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 7946720 - 7946687
Alignment:
Q  187 attatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||| |||||||||||||||||||||    
T  7946720 attatgcattattctaccaactgagttaaactca 7946687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 9819564 - 9819609
Alignment:
Q  176 atcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  9819564 atcttgcatatattatgcattgttcctaccaactgagataaactca 9819609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 10236908 - 10236965
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca 220  Q
    |||||||||| || |||||||| |||||||||| | || |||||||||||||||||||    
T  10236908 ttcgaacctcgaaccttgcatacattatgcattgttcttaccaactgagttaaactca 10236965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 10721489 - 10721534
Alignment:
Q  176 atcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  10721489 atcttgcatatattatgcattgttcctaccaactgagataaactca 10721534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 21105661 - 21105604
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||| || ||||||||||||||||||| ||| ||||||||||| ||| ||||    
T  21105661 ttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaagctca 21105604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 21164765 - 21164818
Alignment:
Q  168 aacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||| |||  |||||||||||||||||| ||||||||||||||| ||||    
T  21164765 aacctcaaaccttatatatattatgcattatccataccaactgagttaagctca 21164818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 22948775 - 22948746
Alignment:
Q  45 cctacattttgcatgactttgaagaatagt 74  Q
    ||||||||||||||||||||||||||||||    
T  22948775 cctacattttgcatgactttgaagaatagt 22948746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 29461840 - 29461881
Alignment:
Q  180 tgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  29461840 tgcatatattatgcattgtccctaccaactgagttaaactca 29461881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 44558781 - 44558834
Alignment:
Q  168 aacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||| | ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  44558781 aacctcagaccttgcatatattatgcattgtccataccaactgagctaaactca 44558834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 3948099 - 3948055
Alignment:
Q  177 tcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    |||||||||||||||||||| || ||| |||||||||||||||||    
T  3948099 tcttgcatatattatgcattgtctctatcaactgagttaaactca 3948055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 6768706 - 6768742
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcatt 196  Q
    ||||||||||||||| | |||||||||||||||||||    
T  6768706 gagattcgaacctcagaccttgcatatattatgcatt 6768742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 10466620 - 10466664
Alignment:
Q  30 gaatatatttttgttcctacattttgcatgactttgaagaatagt 74  Q
    ||||||||| ||| ||||||||||||| |||||||||| ||||||    
T  10466620 gaatatattcttggtcctacattttgcgtgactttgaaaaatagt 10466664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 21751638 - 21751686
Alignment:
Q  173 caaatcttgcatatattatgca-ttatcctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||| || ||||||||||| |||||| ||||    
T  21751638 caaatcttgcatatattatgcatttttcctaccaactaagttaagctca 21751686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 31078486 - 31078550
Alignment:
Q  281 acaaataagcatttacctatgaataatacataatttacaacaaaattattgtcttatagactttt 345  Q
    |||||||  ||||| |||||||| ||| ||||||| ||||||||||| |||||||  ||||||||    
T  31078486 acaaatagacattttcctatgaacaatgcataattgacaacaaaattgttgtcttccagactttt 31078550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 48837925 - 48837873
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    |||||||| ||||  |||||||||||||||||||||| |||||| ||||||||    
T  48837925 ttcgaaccccaaactttgcatatattatgcattatccataccaattgagttaa 48837873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 26515816 - 26515711
Alignment:
Q  227 aactaagttgtagttaaatatatacacaatggttcaaatatgattttatctacgacaaataagcatttacctatgaataatacataatttacaacaaaat 326  Q
    |||||| ||||||||||||||||| ||||||||||||| |||| |||   |||||||||||  ||| || ||||| | ||| ||||||| ||||||||||    
T  26515816 aactaaattgtagttaaatatataaacaatggttcaaacatgacttt---tacgacaaatagccatgtatctatggacaatgcataattgacaacaaaat 26515720  T
Q  327 tattgtctt 335  Q
    | |||||||    
T  26515719 tgttgtctt 26515711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 19396192 - 19396251
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  19396192 gattcaaacatcaaaccttgcatatattatgcattatccctaccaactgagttaaactca 19396251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 24631899 - 24631840
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24631899 gattcgaaccttggatcttgcatatattatgcattatccttaccaactgagttaaactca 24631840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 23460535 - 23460478
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||| || ||||||||    
T  23460535 attcgaacctcaaaccttgcatattttatgcattattctaccaacttagctaaactca 23460478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 9872108 - 9872156
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgag 211  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  9872108 ttcgaaccgcaaaccttgcatatattatgcattatccttaccaactgag 9872156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 30248120 - 30248060
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaa 215  Q
    ||||||||||| ||  ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  30248120 gtctgagattcaaatatcaaatcttacatatattatgcattatccctgccaactgagttaa 30248060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 40618955 - 40618911
Alignment:
Q  177 tcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  40618955 tcttgcatatattatgcattatctttaccaactgagttaaactca 40618911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 1854313 - 1854270
Alignment:
Q  178 cttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  1854313 cttgcatctattatgcattattcctaccaactgagttaaactca 1854270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 5172911 - 5172966
Alignment:
Q  20 ttttaaggttgaatatatttttg-ttcctacattttgcatgactttgaagaatagt 74  Q
    |||||||||| ||||| |||||| |||||||||||||| ||||||| |||||||||    
T  5172911 ttttaaggttcaatatgtttttgattcctacattttgcgtgactttaaagaatagt 5172966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 6000160 - 6000203
Alignment:
Q  178 cttgcatatattatgcattatcct-accaactgagttaaactca 220  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  6000160 cttgcatatattatgcattgtcctaaccaactgagttaaactca 6000203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 25942693 - 25942760
Alignment:
Q  201 taccaactgagttaaactcat-aagataactaagttgtagttaaatatatacacaatggttcaaatat 267  Q
    ||||||||| |  |||||||| |||| |||||||| |||||||||||||||  |||||||||||||||    
T  25942693 taccaactgtgccaaactcatgaagacaactaagtggtagttaaatatataagcaatggttcaaatat 25942760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 28979275 - 28979314
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcattatc 199  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  28979275 gagatttgaacctcgaatcttgcatatattatgcattatc 28979314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 30433515 - 30433566
Alignment:
Q  168 aacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaact 218  Q
    |||||||||||||| |||||||||| |||||| ||| |||||||||||||||    
T  30433515 aacctcaaatcttgtatatattatgtattatctctatcaactgagttaaact 30433566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 47719124 - 47719167
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  47719124 cttgcatatattatgcattatccttaccaactgagttaagctca 47719167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 49868055 - 49868012
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  49868055 cttgcatatattatgcattatccatatcaactgagttaaactca 49868012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 3431373 - 3431331
Alignment:
Q  179 ttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  3431373 ttgcatatattatgcattcttcctaccaactgagttaaactca 3431331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 12852208 - 12852262
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  12852208 gaaccccagatcttacatatattatgcattatccctaccaactgagttaacctca 12852262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 29936026 - 29935984
Alignment:
Q  179 ttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  29936026 ttgcatatattatgcattgtccataccaactgagttaaactca 29935984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 41974816 - 41974762
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||  ||||||||    
T  41974816 gaacctcaaaccttgcatatattatgcattatccctatcaactgaactaaactca 41974762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 10385332 - 10385299
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgag 211  Q
    ||||||||||||||||||||||||| ||||||||    
T  10385332 cttgcatatattatgcattatcctatcaactgag 10385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 28039867 - 28039920
Alignment:
Q  168 aacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||| | ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  28039867 aacctcagaccttgcatatattatgcattgtccttaccaactgagttaagctca 28039920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 33437656 - 33437697
Alignment:
Q  179 ttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||||| ||| |||||||||||||||||| ||||    
T  33437656 ttgcatatattatgtattgtcctaccaactgagttaagctca 33437697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 34808562 - 34808603
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcattatcct 201  Q
    |||||||||||||| || ||||||||||||||||||| ||||    
T  34808562 gagattcgaacctcgaaccttgcatatattatgcattgtcct 34808603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 42416861 - 42416824
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcct 201  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  42416861 ttcgaaccccaaaccttgcatatattatgcattatcct 42416824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 42723135 - 42723172
Alignment:
Q  37 tttttgttcctacattttgcatgactttgaagaatagt 74  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  42723135 tttttgtccctacattttgcttgactttgaagaatagt 42723172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 8153184 - 8153136
Alignment:
Q  173 caaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  8153184 caaatcttacatatattatgcattgtctataccaactgagttaaactca 8153136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 18056719 - 18056771
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    ||||||||||| |  |||||||||||||||||| ||| |||||||||||||||    
T  18056719 ttcgaacctcacacattgcatatattatgcattgtccttaccaactgagttaa 18056771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 19895712 - 19895668
Alignment:
Q  31 aatatatttttgttcc-tacattttgcatgactttgaagaatagt 74  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||    
T  19895712 aatatatttttgatccctacattttgcaagactttgaagaatagt 19895668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 28832172 - 28832236
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactcataaga 225  Q
    |||| |||||||| | |||||||||||||||||||  || ||||||||||||||| |||| ||||    
T  28832172 gatttgaacctcagaccttgcatatattatgcattgttcataccaactgagttaagctcacaaga 28832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 37014191 - 37014239
Alignment:
Q  173 caaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||| ||||||||||||||| || ||||||||||||||| ||||    
T  37014191 caaatcttgtatatattatgcattaaccataccaactgagttaatctca 37014239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 41972749 - 41972785
Alignment:
Q  180 tgcatatattatgcattat-cctaccaactgagttaa 215  Q
    ||||||||||||||||||| |||||||||||||||||    
T  41972749 tgcatatattatgcattatccctaccaactgagttaa 41972785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 50399883 - 50399983
Alignment:
Q  234 ttgtagttaaatatatacacaatggttcaaatatga-ttttatctac-gacaaataagcatttacctatgaataatacataatttacaacaaaattattg 331  Q
    ||||||||||||||||   ||||||||| || |||| |||||||||| || |||||  |||||||||||| |||||  |||||| | | |||||||||||    
T  50399883 ttgtagttaaatatatgagcaatggttctaacatgatttttatctacagaaaaatagacatttacctatggataatttataattgatagcaaaattattg 50399982  T
Q  332 t 332  Q
    |    
T  50399983 t 50399983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 52853033 - 52853065
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcatt 196  Q
    |||||||||||||||||| ||||||||||||||    
T  52853033 ttcgaacctcaaatcttgtatatattatgcatt 52853065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 30639425 - 30639486
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca 220  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||    
T  30639425 gagattcgaacctcagaccttgcatatattatgcattattcctaccaactgagctaaactca 30639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 327
Target Start/End: Original strand, 10385331 - 10385430
Alignment:
Q  230 taagttgtagttaaatatatacacaatggttcaaatatga-ttttatctac-gacaaataagcatttacctatgaataatacataatttacaacaaaatt 327  Q
    ||||||||||||||||||||| | ||||||||||| |||| ||||| |||| ||||||||  | ||||| |||| | ||| ||||||| |||||||||||    
T  10385331 taagttgtagttaaatatataaataatggttcaaacatgacttttacctacggacaaatagacctttacttatggacaattcataattgacaacaaaatt 10385430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 5340123 - 5340081
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  5340123 cttgcatatattatacattatcctaccaattgagttaaactca 5340081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 10018439 - 10018401
Alignment:
Q  182 catatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10018439 catatattatgcattatcctaccaactgagctaaactca 10018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 1989049 - 1989102
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||| ||| ||||||||||||||| || ||||||||||||||| ||||    
T  1989049 gaacctcaaaccttacatatattatgcattgtcataccaactgagttaagctca 1989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 3373382 - 3373437
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaa 216  Q
    |||||||| | |||||||||||||||||||||||| ||| || |||||||||||||    
T  3373382 gattcgaatcccaaatcttgcatatattatgcattgtccatatcaactgagttaaa 3373437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 12735153 - 12735192
Alignment:
Q  172 tcaaatcttgcatatattatgcattatcctaccaactgag 211  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  12735153 tcaaaccttgcatatattatgcattgtcctaccaactgag 12735192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 1874963 - 1874997
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcct 201  Q
    ||||||||||||||||||||||||||||| |||||    
T  1874963 gaacctcaaatcttgcatatattatgcatcatcct 1874997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 9311936 - 9311990
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca 220  Q
    |||||||||||||| ||||||||||| |||| || ||||||||||||||| ||||    
T  9311936 gaacctcaaatcttacatatattatgtattattcataccaactgagttaagctca 9311990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 1918461 - 1918518
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    ||||||||||  | ||||||||||||||||||| ||  ||||||||||||||||||||    
T  1918461 ttcgaacctcggaccttgcatatattatgcattgtctataccaactgagttaaactca 1918518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 15291693 - 15291750
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||| |||||||||||||| |||| ||| |||||||| |||||| ||||    
T  15291693 ttcgaacctcaaaccttgcatatattattcattgtccttaccaactaagttaagctca 15291750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 28987931 - 28987878
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||| || ||||||| ||||||| ||| |||||||||||||||||| ||||    
T  28987931 gaacctctaaccttgcatttattatgtattgtcctaccaactgagttaagctca 28987878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 35110112 - 35110055
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca 220  Q
    ||||||||||||| ||| |||||||||||||||||| | ||||| |||| ||||||||    
T  35110112 ttcgaacctcaaaccttacatatattatgcattatcttgaccaattgagctaaactca 35110055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 331898 - 331946
Alignment:
Q  173 caaatcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    |||| ||||||||||||||||||| || |||||||||||||||| ||||    
T  331898 caaaccttgcatatattatgcattgtctctaccaactgagttaagctca 331946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 10497147 - 10497207
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    ||||| |||||||||| |||| ||| ||||||||||||||| ||| ||| |||||||||||    
T  10497147 gtctgggattcgaaccgcaaaccttacatatattatgcattgtccttacaaactgagttaa 10497207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 3156594 - 3156535
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  3156594 gattcgaaccccaaatcttacatattttatgcattatccataccaactgagttaaactca 3156535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 11017236 - 11017177
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||    
T  11017236 gattcgaacctcagaccttgcatatattatgcattatccctaccaactgagctaaactca 11017177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 11647257 - 11647203
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    |||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||    
T  11647257 gattcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagttaa 11647203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 31545929 - 31545872
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca 220  Q
    |||||||||  || |||||||||||||||||||||||| |||||||||||||| ||||    
T  31545929 ttcgaaccttgaaccttgcatatattatgcattatcctaaccaactgagttaagctca 31545872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 40446045 - 40445984
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||| |||||||| | ||||||||||||||||||| ||| || |||||||||||||||||    
T  40446045 gagatttgaacctcagaccttgcatatattatgcattgtccttatcaactgagttaaactca 40445984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 42854322 - 42854379
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||||| ||| ||||||||||||||| ||| |||| ||||||||| ||||    
T  42854322 attcgaacctcaaaccttacatatattatgcattgtccaaccagctgagttaagctca 42854379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 20258589 - 20258546
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  20258589 cttgcatatattatgcattatccataccaactgagttaacctca 20258546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 2642781 - 2642823
Alignment:
Q  179 ttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  2642781 ttgcatatattatgcattatccctaccaactaagttaaactca 2642823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 5015324 - 5015282
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||||||||||| |||| |||||||||||||| ||||||||    
T  5015324 cttgcatatattattcattgtcctaccaactgagctaaactca 5015282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 6237717 - 6237779
Alignment:
Q  159 tgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    |||| |||||||| | |||||||||||||||||||||| | ||| |||||| |||||||||||    
T  6237717 tgagtttcgaaccccgaatcttgcatatattatgcattgtccctgccaacttagttaaactca 6237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 14951676 - 14951714
Alignment:
Q  182 catatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  14951676 catatagtatgcattatcctactaactgagttaaactca 14951714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 17145349 - 17145403
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaa 215  Q
    ||||||||||||| |||||||||||||||| |||| ||  |||||||||||||||    
T  17145349 gattcgaacctcagatcttgcatatattatacattgtctttaccaactgagttaa 17145403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 36855325 - 36855263
Alignment:
Q  283 aaataagcatttacctatgaataatacataatttacaacaaaattattgtcttatagactttt 345  Q
    |||||| |||||||||||||||||| ||||||| ||| |||||||  ||||||  ||||||||    
T  36855325 aaataaacatttacctatgaataatgcataattgacagcaaaattgctgtctttcagactttt 36855263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 5107248 - 5107305
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca 220  Q
    ||||||||||  | |||||||||||||||||||| || ||||||||||||||| ||||    
T  5107248 ttcgaacctcggaccttgcatatattatgcattattcataccaactgagttaagctca 5107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 16752503 - 16752552
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactga 210  Q
    |||||||||| | |||||||||||||||||||||| ||| ||||||||||    
T  16752503 gattcgaaccccgaatcttgcatatattatgcattgtccttaccaactga 16752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 17046380 - 17046335
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  17046380 atcttgcatatattatgcattgtccataccaactgagttaagctca 17046335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 31198752 - 31198715
Alignment:
Q  179 ttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    |||||||||||||||||||||| |||||||||||||||    
T  31198752 ttgcatatattatgcattatccttaccaactgagttaa 31198715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 36683465 - 36683510
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattatcct 201  Q
    ||||| |||||||||| || ||||||||||||||||||||| ||||    
T  36683465 gtctgggattcgaaccccatatcttgcatatattatgcattgtcct 36683510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 3389217 - 3389169
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagtta 214  Q
    ||||| || ||||||||||||||||||||| ||| ||||||||||||||    
T  3389217 gaaccccagatcttgcatatattatgcattgtccataccaactgagtta 3389169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 74
Target Start/End: Complemental strand, 3935589 - 3935561
Alignment:
Q  46 ctacattttgcatgactttgaagaatagt 74  Q
    |||||||||||||||||||||||||||||    
T  3935589 ctacattttgcatgactttgaagaatagt 3935561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 7713581 - 7713533
Alignment:
Q  173 caaatcttgcatatattatgcatta-tcctaccaactgagttaaactca 220  Q
    |||| |||||||||||||||||||| || || |||||||||||||||||    
T  7713581 caaaccttgcatatattatgcattattcatatcaactgagttaaactca 7713533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 11844437 - 11844489
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgag 211  Q
    ||||||||||||  ||| ||||||||||||||||||| ||| |||||||||||    
T  11844437 gagattcgaaccctaaaccttgcatatattatgcattgtccttaccaactgag 11844489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 19068456 - 19068504
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactcataaga 225  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||    
T  19068456 cttgcatatattatgcattatccataccaactgagctaagctcaaaaga 19068504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 26392200 - 26392148
Alignment:
Q  20 ttttaaggttgaatatatttttgttcctacattttgcatgactttgaagaata 72  Q
    ||||| |||| |||||||||| || |||| ||||||| |||||||||||||||    
T  26392200 ttttagggttaaatatattttggtccctatattttgcgtgactttgaagaata 26392148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 38444886 - 38444850
Alignment:
Q  290 catttacctatgaataatacataatttacaacaaaat 326  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  38444886 catttacctatgaataatacataattgacagcaaaat 38444850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 43108630 - 43108570
Alignment:
Q  161 agattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||||   || ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  43108630 agattcgaaccctgaaccttgcatatattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 35126270 - 35126329
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    |||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35126270 gatttgaaccccagatcttgcatatattatgcattatccctaccaactgagttaaactca 35126329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 5702181 - 5702237
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||| ||| ||||    
T  5702181 ttcgaacctcaaaccttgcatatattatgcattgtcttaccaactgagctaagctca 5702237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 17588422 - 17588363
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||| || ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  17588422 gattcgaaccccagatcttgcatatattatgcattgtccttaccaactgagttaagctca 17588363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 14771391 - 14771337
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaa 215  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| |||||||||||    
T  14771391 gattcgaacctcagaccttgcatatattatgcattatgcctactaactgagttaa 14771337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 22486742 - 22486684
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    ||||||||| ||||||||||||||||||||||||  || ||||||||||||||| ||||    
T  22486742 attcgaaccccaaatcttgcatatattatgcattgttcttaccaactgagttaagctca 22486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 39869806 - 39869868
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    ||||||||||||||  | |||| |||||||||||||| ||| |||||||||||||||||||||    
T  39869806 gagattcgaacctcggaccttgtatatattatgcattgtccttaccaactgagttaaactcat 39869868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 54230102 - 54230160
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    |||||||| |||| ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  54230102 ttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagctaaactcat 54230160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 43815580 - 43815515
Alignment:
Q  158 ctgagattcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactcata 222  Q
    ||||||||||||||  | ||||||||||| ||||||||| ||  ||||||||||||||||||||||    
T  43815580 ctgagattcgaaccatagatcttgcatatgttatgcattgtcattaccaactgagttaaactcata 43815515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 53681880 - 53681937
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||| ||| ||||    
T  53681880 ttcgaacctcaaatcttgcatatattatgcattgttcttaccaactgaggtaagctca 53681937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 26610496 - 26610548
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaa 216  Q
    |||||||| || | ||| ||||||||||||||| |||||||||||||||||||    
T  26610496 ttcgaaccccataccttacatatattatgcattgtcctaccaactgagttaaa 26610548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25770644 - 25770589
Alignment:
Q  20 ttttaaggttgaatatatttttgttc-ctacattttgcatgactttgaagaatagt 74  Q
    ||||| |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  25770644 ttttagggttaaatatatttttgatctctacattttgcgtgactttgaagaatagt 25770589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 48688172 - 48688125
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcctaccaactgag 211  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||    
T  48688172 ttcgaacctcaaaccttacatatattatgcattgtcataccaactgag 48688125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 48849780 - 48849827
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactcataaga 225  Q
    ||||||||||||||||||| || ||||||||||||||| |||| ||||    
T  48849780 cttgcatatattatgcattgtcataccaactgagttaagctcacaaga 48849827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 21914074 - 21914132
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    |||||||| || | ||||||||||||||||||| ||| ||||||||||||||| |||||    
T  21914074 ttcgaaccccataccttgcatatattatgcattgtccttaccaactgagttaagctcat 21914132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 2078295 - 2078246
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaa 215  Q
    ||||| |||| ||||||||||||||||||| || ||||||||||||||||    
T  2078295 gaaccccaaaccttgcatatattatgcattgtctctaccaactgagttaa 2078246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 10922323 - 10922368
Alignment:
Q  176 atcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||    
T  10922323 atcttgcatatattatgcattgtccctaccaactgagttaagctca 10922368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 19883133 - 19883088
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||    
T  19883133 atcttgcatattttatgcattatccataccaactaagttaaactca 19883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 27397615 - 27397672
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||| | | |||||||||||||| |||| ||| ||||||||||||||||||||    
T  27397615 ttcgaaccttagaccttgcatatattatacattgtccataccaactgagttaaactca 27397672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 30200884 - 30200847
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcct 201  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  30200884 ttcgaacctcaaaccttgcatatattatgcattgtcct 30200847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 51505935 - 51505870
Alignment:
Q  160 gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcataag 224  Q
    |||||||||| | |||| ||||||||| ||||||||| ||| || |||||||| ||||||||||||    
T  51505935 gagattcgaatcccaaaccttgcatattttatgcattgtccatatcaactgagctaaactcataag 51505870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 51882215 - 51882260
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  51882215 atcttgcatatattatgcattgtccataccaactgagttaagctca 51882260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 132033 - 131985
Alignment:
Q  20 ttttaaggttgaatatatttttg-ttcctacattttgcatgactttgaa 67  Q
    |||||||||| ||| |||||||| ||||||||| |||||||||||||||    
T  132033 ttttaaggttaaatttatttttggttcctacatgttgcatgactttgaa 131985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 39079085 - 39079131
Alignment:
Q  227 aactaagttgtagttaaatatatacacaatggttcaaatatgatttt 273  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  39079085 aactaagttgtagttaaatatatgaacaatggttcaaatatgatttt 39079131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 20096287 - 20096330
Alignment:
Q  178 cttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  20096287 cttgcatatattatgcattatccctaccaactgagttaaactca 20096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 21052558 - 21052617
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||| | ||||||||||||||| ||||||| ||||||||||| ||||||||    
T  21052558 gattcgaacctcataccttgcatatattatgtattatccataccaactgagctaaactca 21052617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 23673160 - 23673102
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca 220  Q
    |||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||    
T  23673160 gattcgaacc-caaatcttacatatattatgcattattctcaccaactgagttaaactca 23673102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 38416117 - 38416058
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||| ||||    
T  38416117 gattcgaacctcataccttgcatatattatgcattatccttaccaactgagctaagctca 38416058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 55430640 - 55430597
Alignment:
Q  178 cttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  55430640 cttgcatatattatgcattattcctaccaactgagttaaactca 55430597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 30380589 - 30380531
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||| |||| |||||||||||||| |||| ||| ||||||||||||||||||||    
T  30380589 attcgaaccccaaaccttgcatatattatacattgtccttaccaactgagttaaactca 30380531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 8027412 - 8027457
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  8027412 atcttgcatatattatgcattatccttaccaactgagctaaactca 8027457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 56204991 - 56204943
Alignment:
Q  178 cttgcatatattatgcattatcct-accaactgagttaaactcataaga 225  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  56204991 cttgcatatattatgcattgtccttaccaactgagttaaactcacaaga 56204943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 5544951 - 5545006
Alignment:
Q  20 ttttaaggttgaatatatttttgttcc-tacattttgcatgactttgaagaatagt 74  Q
    ||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||||||    
T  5544951 ttttagggttaaatatgtttttggtccctacattttgcatgactttgaagaatagt 5545006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 51002347 - 51002288
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    ||||||||||||||| ||||||||| ||||||||| ||  ||||||||||||||| ||||    
T  51002347 gattcgaacctcaaaccttgcatattttatgcattgtctataccaactgagttaagctca 51002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 51906742 - 51906687
Alignment:
Q  20 ttttaaggttgaatat-atttttgttcctacattttgcatgactttgaagaatagt 74  Q
    ||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||||    
T  51906742 ttttagggttaaatatgattttggtccctacattttgcatgactttgaagaatagt 51906687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 3299100 - 3299154
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca 220  Q
    |||||||||| ||||||||||||||||||| |  | |||||||||||||||||||    
T  3299100 gaacctcaaaccttgcatatattatgcattgttttaaccaactgagttaaactca 3299154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 5520176 - 5520134
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  5520176 cttgcatatattatgcattgtccttgcaactgagttaaactca 5520134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 12058377 - 12058319
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    |||||||||  || ||||||||||||||||||||||| |||| |||||| |||||||||    
T  12058377 ttcgaaccttgaaccttgcatatattatgcattatccttaccgactgagctaaactcat 12058319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 43034348 - 43034402
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||| | ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  43034348 gaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctca 43034402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 43155134 - 43155080
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||| ||||||||||||||||||||||||| || |||||||| ||| ||||    
T  43155134 gaacctcagatcttgcatatattatgcattatccataacaactgagctaagctca 43155080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 44200573 - 44200615
Alignment:
Q  178 cttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||| |||| |||||||||||||||||| |||||||||    
T  44200573 cttgcatattttatacattatcctaccaactgaattaaactca 44200615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 7118087 - 7118034
Alignment:
Q  21 tttaaggttgaatatatttttgttcctacattttgcatgactttgaagaatagt 74  Q
    ||||||||| ||||| |||||| |||||||||||||  ||||||||| ||||||    
T  7118087 tttaaggttaaatatgtttttggtcctacattttgcgcgactttgaaaaatagt 7118034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 19908750 - 19908693
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||  | ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  19908750 ttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagctca 19908693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 44221505 - 44221448
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||| | ||||||||||||||||||| ||| |||||||||| |||| ||||    
T  44221505 ttcgaacctcagaccttgcatatattatgcattgtccataccaactgaattaagctca 44221448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 50442743 - 50442807
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    ||||| |||||||||| || | ||||||||||||||||||||| ||||||||||||| ||| ||||    
T  50442743 gtctgggattcgaacc-cagaccttgcatatattatgcattatccctaccaactgagctaagctca 50442807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 3296722 - 3296766
Alignment:
Q  31 aatatatttttgttcc-tacattttgcatgactttgaagaatagt 74  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||    
T  3296722 aatatatttttgatccctacattttgcgtgactttgaagaatagt 3296766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 6520129 - 6520097
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcatt 196  Q
    ||||||||||||| |||||||||||||||||||    
T  6520129 ttcgaacctcaaaccttgcatatattatgcatt 6520097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 196
Target Start/End: Complemental strand, 9990324 - 9990292
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcatt 196  Q
    ||||||||||| |||||||||||||||||||||    
T  9990324 ttcgaacctcagatcttgcatatattatgcatt 9990292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 24063220 - 24063272
Alignment:
Q  173 caaatcttgcatatattatgcattatc-ctaccaactgagttaaactcataag 224  Q
    |||||||||||||||||||||||| || ||| ||||||||||||  |||||||    
T  24063220 caaatcttgcatatattatgcattgtctctatcaactgagttaagatcataag 24063272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 25978383 - 25978319
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||| ||||||||||||  | ||||||||||||||||||| ||||  |||||||| ||| ||||    
T  25978383 gtctgggattcgaacctcggaccttgcatatattatgcattgtccttacaactgagctaagctca 25978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 8984495 - 8984555
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    ||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| |||||    
T  8984495 gattcgaacatcaaaccttgcatatattatacattatccataccaactgagttaagctcat 8984555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 1230658 - 1230720
Alignment:
Q  158 ctgagattcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactc 219  Q
    ||||| || |||||||||| ||| |||||||||||||||  ||||||||||||||||||||||    
T  1230658 ctgagttttgaacctcaaaccttacatatattatgcattgttcctaccaactgagttaaactc 1230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 9067142 - 9067093
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactga 210  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  9067142 gattcgaacctcagatcttgcataaattatgcattatccttaccaactga 9067093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 42575968 - 42576021
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactc 219  Q
    ||||||||||  |||||||||||||||||||||| |||| ||||||||||||||    
T  42575968 gaacctcaaacattgcatatattatgcattatccataccgactgagttaaactc 42576021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 12674877 - 12674929
Alignment:
Q  173 caaatcttgcatatattatgcattatcctaccaactgagttaaactcataaga 225  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| || ||||||    
T  12674877 caaatcttgcatatattatgtattgtcctaccaactgagctaagcttataaga 12674929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 989595 - 989638
Alignment:
Q  179 ttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    |||||||||||| ||||||||| |||||||||||||||||||||    
T  989595 ttgcatatattaggcattatccctaccaactgagttaaactcat 989638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 6447233 - 6447190
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  6447233 cttgcatatattatgcattgtccataccaactgagttaaactca 6447190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 7553723 - 7553680
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  7553723 cttgcatatattatgcattgtccctaccaactgagttaaactca 7553680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 21005889 - 21005944
Alignment:
Q  20 ttttaaggttgaatatatttttgttcc-tacattttgcatgactttgaagaatagt 74  Q
    ||||| |||| |||||||||||| ||| |||||||||||| |||||||||||||||    
T  21005889 ttttagggttaaatatatttttggtccctacattttgcataactttgaagaatagt 21005944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 37999437 - 37999480
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  37999437 cttgcatatattatgcattatccataccaactgagttaagctca 37999480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 37938538 - 37938496
Alignment:
Q  179 ttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  37938538 ttgcatatattatgcattatccataccaactgagctaaactca 37938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 45396624 - 45396578
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcctaccaact 208  Q
    ||||||||| ||| | ||||||||||||||||||| |||||||||||    
T  45396624 gattcgaacttcagaccttgcatatattatgcattgtcctaccaact 45396578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 7869658 - 7869699
Alignment:
Q  178 cttgcatatattatgcattatcct-accaactgagttaaact 218  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  7869658 cttgcatatattatgcattgtcctcaccaactgagttaaact 7869699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 8442493 - 8442542
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    |||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  8442493 gaacctcagaccttgcatatattatgcattgtccttaccaactgagttaa 8442542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 23816836 - 23816791
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  23816836 atcttgcatatattatgcattatccttaccaactgagctaagctca 23816791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 24212162 - 24212211
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    ||||| |||||||||||||||||||||||| ||| || ||||||||||||    
T  24212162 gaaccacaaatcttgcatatattatgcattgtccatagcaactgagttaa 24212211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 33445636 - 33445571
Alignment:
Q  156 gtctgagattcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    ||||||| |||||| |||||| |||| ||||||||||||||  |||||||||||||| ||| ||||    
T  33445636 gtctgaggttcgaatctcaaaccttgtatatattatgcattgttcctaccaactgagctaagctca 33445571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 18041186 - 18041235
Alignment:
Q  171 ctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||| |||||| ||||||| |||||||| ||||||||||||||    
T  18041186 ctcaaatcttgtatatatcatgcattgtcctaccatctgagttaaactca 18041235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 27152411 - 27152354
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca 220  Q
    |||||||| || | ||||||||||||||||||||| ||||||||||||||||| ||||    
T  27152411 ttcgaaccccagaccttgcatatattatgcattatccctaccaactgagttaagctca 27152354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 22267564 - 22267516
Alignment:
Q  171 ctcaaatcttgcatatattatgcattatcc-taccaactgagttaaact 218  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  22267564 ctcaaaccttgcatatattatgcattgtccgtaccaactgagttaaact 22267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 34364495 - 34364555
Alignment:
Q  161 agattcgaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca 220  Q
    |||||| |||| |||| |||| ||||||||||||||| ||||||||||| |||||||||||    
T  34364495 agattctaaccccaaaccttgtatatattatgcattattcctaccaactaagttaaactca 34364555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 231594 - 231645
Alignment:
Q  162 gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagt 212  Q
    ||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||    
T  231594 gattcgaacctcaaaccttgcatatattatgtattgtccataccaactgagt 231645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 2606579 - 2606524
Alignment:
Q  20 ttttaaggttgaatat-atttttgttcctacattttgcatgactttgaagaatagt 74  Q
    ||||||| || ||||| ||||| ||||||| |||||||||||||||||||||||||    
T  2606579 ttttaagattaaatatgattttggttcctatattttgcatgactttgaagaatagt 2606524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 11839743 - 11839697
Alignment:
Q  175 aatcttgcatatatt-atgcattatcctaccaactgagttaaactca 220  Q
    ||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  11839743 aatcttgcatatatttatgcattatccaaccaactgagttaagctca 11839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 36547237 - 36547295
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||  ||||||||||||| |||||||| ||||||||||| ||| ||||    
T  36547237 attcgaacctcaaactttgcatatattatacattatccttaccaactgagctaagctca 36547295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 40967377 - 40967431
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||||| ||||||||||||||||||| ||| || |||||||||||| ||||    
T  40967377 gaacctcaaaccttgcatatattatgcattgtccttatcaactgagttaagctca 40967431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 43117196 - 43117250
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||| | ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  43117196 gaacctcagaccttgcatatattatgcattgtccttaccaactgagctaaactca 43117250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 2257029 - 2256972
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    |||||||| || | ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  2257029 ttcgaaccccagaccttgcatatattatgcattgtccataccaactgagttaagctca 2256972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 7083689 - 7083742
Alignment:
Q  20 ttttaaggttgaatatatttttgttcc-tacattttgcatgactttgaagaata 72  Q
    ||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||||    
T  7083689 ttttagggttaaatatgtttttggtccctacattttgcatgactttgaagaata 7083742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 18324909 - 18324954
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  18324909 atcttgcatatattatgcattgtccttaccaactgagttaagctca 18324954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 27935114 - 27935057
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||  | |||||||||||| |||||| ||| ||||||||||||||||||||    
T  27935114 ttcgaacctcgtaccttgcatatattctgcattgtccctaccaactgagttaaactca 27935057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 28771628 - 28771583
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaaactca 220  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  28771628 atcttgcatatattatgcattgtccttaccaactgagctaaactca 28771583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 31156872 - 31156823
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattat-cctaccaactgag 211  Q
    ||||||||| || ||||| ||||||||||||||||| |||||||||||||    
T  31156872 attcgaaccccagatcttacatatattatgcattatccctaccaactgag 31156823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 35685078 - 35685123
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactcata 222  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  35685078 cttgcatatattatgcattgtccttaccaactgagctaaactcata 35685123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 35727495 - 35727438
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca 220  Q
    |||||||| |||| |||||||||||||||||||  || ||||||||||||||| ||||    
T  35727495 ttcgaaccccaaaccttgcatatattatgcattgttcttaccaactgagttaagctca 35727438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 37320520 - 37320577
Alignment:
Q  164 ttcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactca 220  Q
    |||||||||| || ||||||||||||||||||| ||  ||||||||||||||| ||||    
T  37320520 ttcgaacctcgaaccttgcatatattatgcattgtctttaccaactgagttaagctca 37320577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 5168596 - 5168640
Alignment:
Q  178 cttgcatatattatgcattat-cctaccaactgagttaaactcat 221  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||    
T  5168596 cttgcatatattatgcattatccctatcaactgagttaagctcat 5168640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 12619403 - 12619367
Alignment:
Q  163 attcgaacctcaaatcttgcatatattatgcattatc 199  Q
    ||||||||| || ||||||||||||||||||||||||    
T  12619403 attcgaaccccagatcttgcatatattatgcattatc 12619367  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 21267257 - 21267285
Alignment:
Q  46 ctacattttgcatgactttgaagaatagt 74  Q
    |||||||||||||||||||||||||||||    
T  21267257 ctacattttgcatgactttgaagaatagt 21267285  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 22359051 - 22359011
Alignment:
Q  176 atcttgcatatattatgcattatcc-taccaactgagttaa 215  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  22359051 atcttgcatatattatgcattgtccttaccaactgagttaa 22359011  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 30978406 - 30978362
Alignment:
Q  178 cttgcatatattatgcattatcc-taccaactgagttaaactcat 221  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||    
T  30978406 cttgcatatattatgcattatccataccaattgagctaaactcat 30978362  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 44558047 - 44558007
Alignment:
Q  180 tgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    |||||| |||||||| | |||||||||||||||||||||||    
T  44558047 tgcataaattatgcaatgtcctaccaactgagttaaactca 44558007  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 221031 - 221077
Alignment:
Q  179 ttgcatatattatgcattatcc-taccaactgagttaaactcataag 224  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  221031 ttgcatatattatgtattatccctaccaactgagctaaactcataag 221077  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 31161 - 31214
Alignment:
Q  167 gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactc 219  Q
    ||||| || ||||||||||||||||||||| ||| ||||||||||| |||||||    
T  31161 gaaccgcagatcttgcatatattatgcattgtccataccaactgagctaaactc 31214  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 505064 - 505012
Alignment:
Q  168 aacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca 220  Q
    ||||||| | ||||||||| ||||||||| |||||||||||||| ||| ||||    
T  505064 aacctcataccttgcatattttatgcattgtcctaccaactgagctaagctca 505012  T

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