View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16592_high_59 (Length: 330)

Name: NF16592_high_59
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16592_high_59
NF16592_high_59
[»] chr8 (37 HSPs)
chr8 (19-185)||(6825407-6825573)
chr8 (39-180)||(6852904-6853046)
chr8 (248-307)||(39211059-39211118)
chr8 (270-320)||(6825259-6825309)
chr8 (248-296)||(14710899-14710947)
chr8 (248-296)||(37392134-37392182)
chr8 (248-296)||(41541875-41541923)
chr8 (248-314)||(1796502-1796568)
chr8 (248-293)||(11138913-11138958)
chr8 (248-296)||(157073-157121)
chr8 (248-296)||(5502377-5502425)
chr8 (248-296)||(30439511-30439559)
chr8 (248-296)||(32777902-32777950)
chr8 (248-296)||(32954858-32954906)
chr8 (248-299)||(7010691-7010742)
chr8 (265-296)||(7777185-7777216)
chr8 (248-307)||(32020460-32020519)
chr8 (255-294)||(36178268-36178307)
chr8 (265-296)||(42786665-42786696)
chr8 (248-307)||(43419885-43419944)
chr8 (265-307)||(27325792-27325834)
chr8 (248-294)||(40413357-40413403)
chr8 (250-296)||(44103784-44103830)
chr8 (248-306)||(45405815-45405873)
chr8 (264-293)||(7814601-7814630)
chr8 (266-307)||(12284264-12284305)
chr8 (265-306)||(36786807-36786848)
chr8 (248-285)||(44607707-44607744)
chr8 (248-296)||(324100-324148)
chr8 (248-296)||(1370291-1370339)
chr8 (248-296)||(11789816-11789864)
chr8 (264-296)||(20683554-20683586)
chr8 (248-296)||(29108001-29108049)
chr8 (248-296)||(37524434-37524482)
chr8 (248-296)||(37657007-37657055)
chr8 (264-296)||(41304988-41305020)
chr8 (255-291)||(41935005-41935041)
[»] chr3 (23 HSPs)
chr3 (248-296)||(47683807-47683855)
chr3 (248-296)||(43169759-43169807)
chr3 (248-296)||(55361239-55361287)
chr3 (250-297)||(28884499-28884546)
chr3 (248-297)||(23906992-23907041)
chr3 (264-296)||(3281721-3281753)
chr3 (248-296)||(46952955-46953003)
chr3 (248-296)||(49761325-49761373)
chr3 (248-307)||(52564642-52564699)
chr3 (265-296)||(4494242-4494273)
chr3 (248-307)||(28700478-28700537)
chr3 (248-295)||(44937225-44937272)
chr3 (248-307)||(53871027-53871086)
chr3 (248-307)||(55322711-55322770)
chr3 (248-306)||(1765410-1765468)
chr3 (265-307)||(10811170-10811212)
chr3 (264-294)||(21005183-21005213)
chr3 (258-296)||(37780340-37780378)
chr3 (248-296)||(3484776-3484824)
chr3 (248-296)||(29057665-29057713)
chr3 (248-296)||(29846897-29846945)
chr3 (248-296)||(31997819-31997867)
chr3 (248-296)||(54195357-54195405)
[»] chr1 (43 HSPs)
chr1 (248-296)||(40596060-40596108)
chr1 (248-296)||(41507200-41507248)
chr1 (248-297)||(50797797-50797846)
chr1 (248-296)||(5477169-5477217)
chr1 (248-296)||(27687525-27687573)
chr1 (248-296)||(40139132-40139180)
chr1 (248-296)||(49453497-49453545)
chr1 (248-306)||(16836111-16836169)
chr1 (248-306)||(41558010-41558068)
chr1 (248-306)||(46903487-46903545)
chr1 (248-289)||(4637942-4637983)
chr1 (265-306)||(21433396-21433437)
chr1 (248-305)||(42539424-42539481)
chr1 (248-296)||(5975554-5975602)
chr1 (248-296)||(8200093-8200141)
chr1 (248-296)||(31480125-31480173)
chr1 (248-296)||(33358164-33358212)
chr1 (248-296)||(45065907-45065955)
chr1 (248-296)||(45272166-45272214)
chr1 (248-296)||(48220149-48220197)
chr1 (248-296)||(48325784-48325832)
chr1 (250-293)||(1690454-1690497)
chr1 (265-296)||(8447771-8447802)
chr1 (248-307)||(11597654-11597713)
chr1 (265-307)||(8350191-8350233)
chr1 (265-307)||(8846008-8846050)
chr1 (265-307)||(9566955-9566997)
chr1 (265-307)||(27465052-27465094)
chr1 (248-290)||(43612092-43612134)
chr1 (248-306)||(43757605-43757663)
chr1 (265-307)||(50775151-50775193)
chr1 (265-307)||(51436766-51436808)
chr1 (263-296)||(18336179-18336212)
chr1 (265-294)||(29147880-29147909)
chr1 (250-307)||(44517956-44518013)
chr1 (248-285)||(48872045-48872082)
chr1 (248-296)||(19969567-19969615)
chr1 (248-296)||(44632546-44632594)
chr1 (248-296)||(47386811-47386859)
chr1 (265-297)||(48983672-48983704)
chr1 (248-296)||(49241510-49241558)
chr1 (248-296)||(50781575-50781623)
chr1 (248-296)||(51571421-51571469)
[»] chr5 (18 HSPs)
chr5 (255-306)||(372716-372767)
chr5 (248-314)||(6865775-6865841)
chr5 (248-296)||(14206406-14206454)
chr5 (248-296)||(16202737-16202785)
chr5 (248-296)||(33567229-33567277)
chr5 (265-307)||(14532539-14532581)
chr5 (248-293)||(31284403-31284448)
chr5 (248-296)||(1839350-1839398)
chr5 (248-296)||(13734366-13734414)
chr5 (248-296)||(29227723-29227771)
chr5 (248-296)||(33910094-33910142)
chr5 (248-296)||(39458674-39458722)
chr5 (265-296)||(6758796-6758827)
chr5 (255-296)||(2117630-2117671)
chr5 (248-281)||(16143396-16143429)
chr5 (248-296)||(4434488-4434536)
chr5 (248-296)||(5130384-5130432)
chr5 (264-296)||(39191840-39191872)
[»] chr7 (33 HSPs)
chr7 (248-306)||(34264600-34264658)
chr7 (248-296)||(2469709-2469757)
chr7 (248-296)||(3062348-3062396)
chr7 (248-296)||(22330637-22330685)
chr7 (248-296)||(37351996-37352044)
chr7 (248-295)||(31274547-31274594)
chr7 (248-297)||(2323310-2323359)
chr7 (248-296)||(7817655-7817703)
chr7 (248-296)||(37856171-37856219)
chr7 (248-296)||(41985106-41985154)
chr7 (265-296)||(5174557-5174588)
chr7 (248-295)||(25887600-25887647)
chr7 (265-296)||(41430157-41430188)
chr7 (249-292)||(45431971-45432014)
chr7 (256-302)||(26041335-26041381)
chr7 (248-314)||(43444641-43444707)
chr7 (265-307)||(47448861-47448903)
chr7 (255-296)||(10619705-10619746)
chr7 (248-305)||(31785468-31785525)
chr7 (265-314)||(34108842-34108891)
chr7 (248-296)||(237030-237078)
chr7 (264-296)||(3937127-3937159)
chr7 (248-296)||(6822539-6822587)
chr7 (264-296)||(11352979-11353011)
chr7 (265-297)||(12007190-12007222)
chr7 (250-306)||(22925278-22925334)
chr7 (248-296)||(25272608-25272656)
chr7 (265-297)||(29723931-29723963)
chr7 (264-296)||(33224857-33224889)
chr7 (248-296)||(35293134-35293182)
chr7 (248-296)||(37832456-37832504)
chr7 (248-296)||(38547296-38547344)
chr7 (270-306)||(45556012-45556048)
[»] chr4 (33 HSPs)
chr4 (248-302)||(32365667-32365721)
chr4 (248-314)||(32621644-32621710)
chr4 (248-296)||(28676158-28676206)
chr4 (248-296)||(39241307-39241355)
chr4 (248-307)||(42490926-42490985)
chr4 (39-122)||(47839522-47839605)
chr4 (248-306)||(46686251-46686308)
chr4 (248-293)||(54036538-54036583)
chr4 (265-314)||(56474751-56474800)
chr4 (248-296)||(4511831-4511879)
chr4 (248-296)||(5386390-5386438)
chr4 (263-307)||(17367109-17367153)
chr4 (248-296)||(28657446-28657494)
chr4 (248-296)||(30778270-30778318)
chr4 (248-296)||(31657664-31657712)
chr4 (248-296)||(39605985-39606032)
chr4 (248-296)||(43769729-43769777)
chr4 (248-296)||(46173556-46173604)
chr4 (248-296)||(48326558-48326606)
chr4 (248-307)||(2109449-2109508)
chr4 (255-294)||(24019978-24020017)
chr4 (248-290)||(1840601-1840643)
chr4 (248-306)||(37731932-37731990)
chr4 (250-307)||(1627553-1627610)
chr4 (266-307)||(5249904-5249945)
chr4 (263-296)||(17683257-17683290)
chr4 (248-297)||(37022278-37022327)
chr4 (248-285)||(41119498-41119535)
chr4 (256-296)||(15515809-15515849)
chr4 (248-296)||(24310527-24310575)
chr4 (248-296)||(29974333-29974381)
chr4 (265-297)||(38519828-38519860)
chr4 (265-297)||(51255781-51255813)
[»] chr2 (33 HSPs)
chr2 (248-306)||(31151067-31151125)
chr2 (248-296)||(29795453-29795501)
chr2 (248-296)||(38600831-38600879)
chr2 (248-306)||(24727432-24727490)
chr2 (248-305)||(7121396-7121453)
chr2 (248-297)||(37966373-37966422)
chr2 (248-296)||(6646841-6646889)
chr2 (248-296)||(22353181-22353229)
chr2 (248-296)||(25801819-25801867)
chr2 (248-296)||(26277113-26277161)
chr2 (248-284)||(32755697-32755733)
chr2 (248-296)||(32972912-32972960)
chr2 (267-307)||(40504261-40504301)
chr2 (248-296)||(44018069-44018117)
chr2 (265-296)||(6895930-6895961)
chr2 (265-296)||(9990725-9990756)
chr2 (265-296)||(34431832-34431863)
chr2 (265-296)||(43057099-43057130)
chr2 (248-314)||(8482220-8482286)
chr2 (262-296)||(23352910-23352944)
chr2 (248-302)||(42607530-42607584)
chr2 (248-293)||(10550468-10550513)
chr2 (249-293)||(2971823-2971867)
chr2 (248-296)||(3012851-3012899)
chr2 (270-306)||(4432353-4432389)
chr2 (264-296)||(12600081-12600113)
chr2 (248-296)||(15141479-15141527)
chr2 (248-296)||(19695697-19695745)
chr2 (250-294)||(28013975-28014019)
chr2 (248-296)||(40496367-40496415)
chr2 (248-296)||(42081054-42081102)
chr2 (248-296)||(42678767-42678815)
chr2 (248-296)||(45202138-45202186)
[»] scaffold0054 (1 HSPs)
scaffold0054 (248-296)||(31606-31654)
[»] chr6 (10 HSPs)
chr6 (262-296)||(5028271-5028305)
chr6 (248-314)||(32644629-32644695)
chr6 (248-297)||(12441544-12441593)
chr6 (265-296)||(1376399-1376430)
chr6 (265-296)||(1384147-1384178)
chr6 (250-296)||(17442841-17442887)
chr6 (255-296)||(12177590-12177631)
chr6 (248-293)||(28748130-28748175)
chr6 (250-291)||(32149508-32149549)
chr6 (248-296)||(1196064-1196112)
[»] scaffold0687 (1 HSPs)
scaffold0687 (264-293)||(7093-7122)
[»] scaffold0155 (1 HSPs)
scaffold0155 (248-296)||(3277-3325)
[»] scaffold0100 (1 HSPs)
scaffold0100 (248-296)||(44792-44840)
[»] scaffold0053 (1 HSPs)
scaffold0053 (265-293)||(12532-12560)
[»] scaffold0018 (1 HSPs)
scaffold0018 (264-296)||(36035-36067)


Alignment Details
Target: chr8 (Bit Score: 114; Significance: 9e-58; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 6825573 - 6825407
Alignment:
Q  19 aagacgttctaagtccaatccttaattttaataaaaattttagtctttataaaattttatgcgcacaaatttagttcttcttaaaaccaaatttgtttaa 118  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6825573 aagacgttctaagtctaatccttaattttaataaaattttaagtctttataaaattttatgcgcacaaatttagttcttgttaaaaccaaatttgtttaa 6825474  T
Q  119 ctaatctttaactgttaannnnnnnaacgactttttgcatgcatatttagaacattacaaaagttcg 185  Q
    |||||||| || ||||||       |||||||||||||||||||||||||||||||| |||| ||||    
T  6825473 ctaatcttcaattgttaatttttttaacgactttttgcatgcatatttagaacattaaaaaaattcg 6825407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 6852904 - 6853046
Alignment:
Q  39 cttaattttaataaaaattttagtctttataaaattttatgcgcacaaatttagttcttcttaaaaccaaatttgtttaactaatctttaactgtt-aan 137  Q
    ||||||||||||| | | |  ||||||||| || |||| |||||||||||||||||| | | |||||||||||||||||||||||||| || |||| ||     
T  6852904 cttaattttaatagatactccagtctttatgaatttttttgcgcacaaatttagttcctgtcaaaaccaaatttgtttaactaatcttaaattgttaaat 6853003  T
Q  138 nnnnnnaacgactttttgcatgcatatttagaacattacaaaa 180  Q
          |||||||||||  ||||||||||||||||||| ||||    
T  6853004 ttttttaacgactttttctatgcatatttagaacattataaaa 6853046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 39211059 - 39211118
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| || ||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  39211059 tgatatttgaacaaccattttttgacaactttctctctcatactcacattttgtttttac 39211118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Complemental strand, 6825309 - 6825259
Alignment:
Q  270 tgacaactttctctcttatactcacatgttgtttttacactctctgctcct 320  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  6825309 tgacaactttttctcttatactcacatgttgtttttaaactctctgttcct 6825259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 14710947 - 14710899
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  14710947 tgatatttgtacaatcattttgtgacaactttctctctcatactcacat 14710899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 37392182 - 37392134
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  37392182 tgatatttgtacaaccattttttgacaactttctctctcatactcacat 37392134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 41541875 - 41541923
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||    
T  41541875 tgatatttgaacatccattttgtgacaactttctctcttatactcacat 41541923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 1796502 - 1796568
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    |||||| |||||||||| |||||||||||||||| ||| |||||||||| || || |||| ||||||    
T  1796502 tgatatttgtacaaccactttgtgacaactttctttctcatactcacattttattattactctctct 1796568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 11138913 - 11138958
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||    
T  11138913 tgatatttgtacaactattttgtgacaactttctctctcatactca 11138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 157073 - 157121
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||| ||||    
T  157073 tgatatttgtacaaccattttgcgacaactttctctctcatacttacat 157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 5502377 - 5502425
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||| ||||||    
T  5502377 tgatatttgtacaaccactttgtgacaactttctctctcatattcacat 5502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 30439559 - 30439511
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  30439559 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 30439511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 32777902 - 32777950
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||   |||||||||||||||||||||||||    
T  32777902 tgatatctgtacaaccatttttatacaactttctctcttatactcacat 32777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 32954858 - 32954906
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  32954858 tgatatttgaacatccattttgtgacaactttctctctgatactcacat 32954906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 7010691 - 7010742
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgtt 299  Q
    |||||| ||||||| |||||| |||||| ||||||||| |||||||||||||    
T  7010691 tgatatttgtacaatcattttttgacaattttctctctcatactcacatgtt 7010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 7777216 - 7777185
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  7777216 ttttgtgacaactttctctcttatactcacat 7777185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 32020519 - 32020460
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| |||||||||||||| ||| |||||||||||| |||||| |||  |||||||||    
T  32020519 tgatatttgtacaaccattttttgataactttctctctcatactcgcattatgtttttac 32020460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 36178307 - 36178268
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatactcac 294  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  36178307 tgtacaaccaatttgtgacaactttctctctcatactcac 36178268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 42786696 - 42786665
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  42786696 ttttgtgacaactttctctcttatactcacat 42786665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 43419885 - 43419944
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| |||||||| | |||||||||| ||||||||||||||| ||||  |||||||||    
T  43419885 tgatatttgtacaactaatttgtgacaattttctctcttatacttacattatgtttttac 43419944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 27325792 - 27325834
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||| | |||||||    
T  27325792 ttttgtgacaactttctctctcatactcacatgatctttttac 27325834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 40413403 - 40413357
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcac 294  Q
    |||||| |||||||  |||||||||||||||||||||| ||||||||    
T  40413403 tgatatttgtacaattattttgtgacaactttctctctcatactcac 40413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 44103784 - 44103830
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||| |||||||||| ||| |||||||||||||||| ||||||||||    
T  44103784 atatttgtacaaccactttatgacaactttctctctcatactcacat 44103830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 45405873 - 45405815
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| |||||||||||||||  |||||||| ||||| ||||||||||  ||||||||    
T  45405873 tgatatttgtacaaccattttgatacaactttttctctcatactcacattatgttttta 45405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 293
Target Start/End: Complemental strand, 7814630 - 7814601
Alignment:
Q  264 attttgtgacaactttctctcttatactca 293  Q
    ||||||||||||||||||||||||||||||    
T  7814630 attttgtgacaactttctctcttatactca 7814601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 12284305 - 12284264
Alignment:
Q  266 tttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||||||||||||||||| ||||||| || ||||||||||    
T  12284305 tttgtgacaactttctctctcatactcatattttgtttttac 12284264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 36786807 - 36786848
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    ||||||||||||||||||||||||||||| ||  ||||||||    
T  36786807 ttttgtgacaactttctctcttatactcaaattatgttttta 36786848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 44607707 - 44607744
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctct 285  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  44607707 tgatatttgtacaaccatttggtgacaactttctctct 44607744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 324148 - 324100
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||| ||| ||| |||||||||||||| | ||||||||||    
T  324148 tgatatatgtacatccactttttgacaactttctctgtcatactcacat 324100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 1370339 - 1370291
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||||| |||||||||||||  ||||||||||    
T  1370339 tgatatttgtacaaccactttgtaacaactttctctcacatactcacat 1370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 11789816 - 11789864
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| || ||| |||||||||||| ||||||||||||||    
T  11789816 tgatatttgtacaaacactttatgacaactttctttcttatactcacat 11789864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 20683554 - 20683586
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    ||||| |||||||||||||||||||||||||||    
T  20683554 attttttgacaactttctctcttatactcacat 20683586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 29108001 - 29108049
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| |||||| | |||||||||||| ||||||||||||    
T  29108001 tgatatttgtacaatcattttttaacaactttctcttttatactcacat 29108049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 37524482 - 37524434
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| || |||||||||||||||||||  ||||||||||    
T  37524482 tgatatttgtacaagcactttgtgacaactttctctcacatactcacat 37524434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 37657007 - 37657055
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  37657007 tgatatttgaacatccatttagtgacaactttctctctcatactcacat 37657055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 41305020 - 41304988
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    ||||| |||||||||||||||||||||||||||    
T  41305020 attttatgacaactttctctcttatactcacat 41304988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 41935005 - 41935041
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatact 291  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  41935005 tgtacaaccattttgtgacaattttctctctcatact 41935041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 47683807 - 47683855
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  47683807 tgatatttgtacaaccattttgtgacaactttctctctcatactcacat 47683855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 43169807 - 43169759
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  43169807 tgatatttgtacaaccattttgtgacaactttttctctcatactcacat 43169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 55361287 - 55361239
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||    
T  55361287 tgatatttgtacaaccatttcttgacaactttctctcttatactcacat 55361239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 28884499 - 28884546
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||| |||||||||||| |||||||||||||||||| |||||||||||    
T  28884499 atatttgtacaaccattatgtgacaactttctctctcatactcacatg 28884546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 23907041 - 23906992
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||||| |||||||||||| ||| |||||||||||||| |||||||||||    
T  23907041 tgatatttgtacaaccattatgttacaactttctctctcatactcacatg 23906992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 3281753 - 3281721
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||||||||||||||    
T  3281753 attttgtgacaactttctctcttatactcacat 3281721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 46952955 - 46953003
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| ||| |||||||||||| ||||||||||    
T  46952955 tgatatttgtacaaccattttttgataactttctctctcatactcacat 46953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 49761325 - 49761373
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  49761325 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 49761373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 52564699 - 52564642
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| ||||||||||||||||||||| ||||||||  ||||||||||  |||||||||    
T  52564699 tgatatttgtacaaccattttgtgacaattttctctc--atactcacattatgtttttac 52564642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 4494273 - 4494242
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  4494273 ttttgtgacaactttctctcttatactcacat 4494242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 28700478 - 28700537
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| || ||||||||||| |||||||||| ||||| ||||||||||  |||||||||    
T  28700478 tgatatttgaacaaccattttttgacaactttatctctcatactcacattatgtttttac 28700537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 44937225 - 44937272
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcaca 295  Q
    |||||| |||||||| ||||| |||||||||||||| |||||||||||    
T  44937225 tgatatttgtacaacaattttttgacaactttctcttttatactcaca 44937272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 53871086 - 53871027
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| || ||||||||||| |||||| ||||||||| ||| |||||| ||||||||||    
T  53871086 tgatatttgaacaaccattttatgacaattttctctctcatattcacattttgtttttac 53871027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 55322770 - 55322711
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| ||||| | ||||||||||||||||||||||  ||||||||||  |||||||||    
T  55322770 tgatatttgtacgagcattttgtgacaactttctctcccatactcacattatgtttttac 55322711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 1765410 - 1765468
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| ||||||  ||||||||||||||||||||||| |||| |||||  ||||||||    
T  1765410 tgatatttgtacattcattttgtgacaactttctctctcatacgcacattatgttttta 1765468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 10811170 - 10811212
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  10811170 ttttgtgacaactttctctctcatactcacattgtgtttttac 10811212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 294
Target Start/End: Complemental strand, 21005213 - 21005183
Alignment:
Q  264 attttgtgacaactttctctcttatactcac 294  Q
    |||||||||||||||||||||||||||||||    
T  21005213 attttgtgacaactttctctcttatactcac 21005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 37780340 - 37780378
Alignment:
Q  258 acaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  37780340 acaacaattttgtgacaactttctctctcatactcacat 37780378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 3484776 - 3484824
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||| |||||||||| | |||||||||||||| ||||||||||    
T  3484776 tgatatttgtccaaccattttattacaactttctctctcatactcacat 3484824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 29057665 - 29057713
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||   |||||||||||||| ||||||||||    
T  29057665 tgatatttgtacaaccatttttgtacaactttctctctcatactcacat 29057713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 29846945 - 29846897
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||   |||||||||||||| ||||||||||    
T  29846945 tgatatttgtacaaccatttttgtacaactttctctctcatactcacat 29846897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 31997819 - 31997867
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||| | | ||||||||||    
T  31997819 tgatatttgtacaaccactttgtgacaactttctttttcatactcacat 31997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 54195357 - 54195405
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||| ||||||||||||||| ||||||||||||    
T  54195357 tgatatttgaacatccatttagtgacaactttctcttttatactcacat 54195405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 40596108 - 40596060
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  40596108 tgatatttgtacaaccattttgtgacaactttctctctcatactcacat 40596060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 41507248 - 41507200
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  41507248 tgatatttgtacaaccattttgtgacaactttctctctcatactcacat 41507200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 50797797 - 50797846
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  50797797 tgatatttgtacaatcattttgtgacaactttctctctcatactcacatg 50797846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 5477217 - 5477169
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  5477217 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 5477169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 27687573 - 27687525
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  27687573 tgatatttgtacaaccattttgtgacaactttatctctcatactcacat 27687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 40139132 - 40139180
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  40139132 tgatatttgtacaaccattttatgacaactttctctctcatactcacat 40139180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 49453497 - 49453545
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  49453497 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 49453545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 16836169 - 16836111
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| ||||||| ||||||||||||||||| ||||| ||||||||||  ||||||||    
T  16836169 tgatatttgtacaatcattttgtgacaactttttctctcatactcacattatgttttta 16836111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 41558010 - 41558068
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| |||||||||||||||||||||||  |||||| ||||||||||  ||||||||    
T  41558010 tgatatttgtacaaccattttgtgacaactcactctctcatactcacattatgttttta 41558068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 46903487 - 46903545
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| |||||||||||||||  |||||||||||||| ||||||||||  ||||||||    
T  46903487 tgatatttgtacaaccattttgatacaactttctctctcatactcacattatgttttta 46903545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 4637942 - 4637983
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttata 289  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  4637942 tgatatttgtacaaccattttgtaacaactttctctcttata 4637983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 21433437 - 21433396
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  21433437 ttttgtgacaactttctctcttatactcacattatgttttta 21433396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 42539424 - 42539481
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttt 305  Q
    |||||| |||||||||||| |||||||||||||||||| | ||||||||  |||||||    
T  42539424 tgatatttgtacaaccattatgtgacaactttctctctcagactcacattatgttttt 42539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 5975554 - 5975602
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  5975554 tgatatatgtacatccactttttgacaactttctctctcatactcacat 5975602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 8200093 - 8200141
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  8200093 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 8200141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 31480173 - 31480125
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||| ||| ||||||| |||||||||||| ||||||||||    
T  31480173 tgatatatgtacatccactttgtgataactttctctctcatactcacat 31480125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 33358212 - 33358164
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  33358212 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 33358164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 45065955 - 45065907
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  45065955 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 45065907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 45272214 - 45272166
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||||    
T  45272214 tgatatttgtacaaccactttttgacaactttctctctcatactcacat 45272166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 48220197 - 48220149
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  48220197 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 48220149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 48325832 - 48325784
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||| ||||| ||| ||||||||||    
T  48325832 tgatatttgtacaaccattttgtgacaattttctatctcatactcacat 48325784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 1690454 - 1690497
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||    
T  1690454 atatttgtacaaccattttgtgacaactttttctctcatactca 1690497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 8447771 - 8447802
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  8447771 ttttgtgacaactttctctcttatactcacat 8447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 11597654 - 11597713
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| |||||||||| ||||||||||||||||||   ||||||||||  |||||||||    
T  11597654 tgatatctgtacaaccaatttgtgacaactttctctgccatactcacattatgtttttac 11597713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 8350233 - 8350191
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||| | |||||||    
T  8350233 ttttgtgacaactttctctctcatactcacatgatctttttac 8350191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 8846008 - 8846050
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||    
T  8846008 ttttgtgacaattttctctctcatactcacatgatgtttttac 8846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 9566997 - 9566955
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  9566997 ttttgtgacaactttctctctcatactcacattatgtttttac 9566955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 27465094 - 27465052
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||| | |||||||    
T  27465094 ttttgtgacaactttctctctcatactcacatgatctttttac 27465052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 290
Target Start/End: Complemental strand, 43612134 - 43612092
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatac 290  Q
    |||||| |||||||||||||| |||||||||||||||| ||||    
T  43612134 tgatatttgtacaaccattttatgacaactttctctctcatac 43612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 43757605 - 43757663
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| |||||||||||||||  |||||||||||| | ||||||||||  ||||||||    
T  43757605 tgatatttgtacaaccattttgatacaactttctctttcatactcacattatgttttta 43757663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 50775193 - 50775151
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  50775193 ttttgtgacaactttctctctcatactcacattatgtttttac 50775151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 51436808 - 51436766
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||    
T  51436808 ttttgtgacaactttatctctcatactcacattttgtttttac 51436766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 18336179 - 18336212
Alignment:
Q  263 cattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||| ||||||||||    
T  18336179 cattttgtgacaactttctctctcatactcacat 18336212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Complemental strand, 29147909 - 29147880
Alignment:
Q  265 ttttgtgacaactttctctcttatactcac 294  Q
    ||||||||||||||||||||||||||||||    
T  29147909 ttttgtgacaactttctctcttatactcac 29147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 44518013 - 44517956
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||| |||| || ||||||||||||| ||||||||| ||| |||||| ||||||||||    
T  44518013 atatttgtataatcattttgtgacaattttctctctcatattcacattttgtttttac 44517956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 48872082 - 48872045
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctct 285  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  48872082 tgatatttgtacaaccattttttgacaactttctctct 48872045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 19969615 - 19969567
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| ||||||| |||||||||||||||| ||||||||||    
T  19969615 tgatatttgaacatccattttatgacaactttctctctcatactcacat 19969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 44632546 - 44632594
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  44632546 tgatatttgaacatccatttggtgacaactttctctctcatactcacat 44632594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 47386859 - 47386811
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| | |||||||| |||||||||| |||||    
T  47386859 tgatatttgtacaaccattttataacaactttatctcttatacacacat 47386811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 48983704 - 48983672
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  48983704 ttttgtgacaactttctctctcatactcacatg 48983672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 49241558 - 49241510
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| ||| |||||||||||||||||||| ||||||||||    
T  49241558 tgatatttgaacatccactttgtgacaactttctctctcatactcacat 49241510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 50781623 - 50781575
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| ||||||| |||||||||||||||| ||||||||||    
T  50781623 tgatatttgaacatccattttatgacaactttctctctcatactcacat 50781575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 51571421 - 51571469
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||| |||||||||||||||| ||| ||||||    
T  51571421 tgatatttgtacaaccactttttgacaactttctctctcatattcacat 51571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 372767 - 372716
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||||||    
T  372767 tgtacaaccattttgtgacaactttctctctcatactcacatgatattttta 372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 6865841 - 6865775
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||  | ||||||| ||||||    
T  6865841 tgatatttgtacaaccactttgtgacaactttctctctcatactcacataatatttttactctctct 6865775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 14206406 - 14206454
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  14206406 tgatatttgtacaaccattttttgacaactttctctctcatactcacat 14206454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 16202737 - 16202785
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  16202737 tgatatatgtacacctattttgtgacaactttctctctcatactcacat 16202785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 33567277 - 33567229
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  33567277 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 33567229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 14532539 - 14532581
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  14532539 ttttgtgacaactttctctctcatactcacattttgtttttac 14532581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 31284448 - 31284403
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    |||||| |||||| |||||||||||||||||||||||| |||||||    
T  31284448 tgatatttgtacatccattttgtgacaactttctctctcatactca 31284403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 1839398 - 1839350
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  1839398 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 1839350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 13734414 - 13734366
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||||    
T  13734414 tgatatttgtacaaccactttatgacaactttctctctcatactcacat 13734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 29227723 - 29227771
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||| | |||||||||||||||||||| ||||||||||    
T  29227723 tgatatttgtacaactactttgtgacaactttctctctcatactcacat 29227771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 33910142 - 33910094
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||| |||||||||| |||||||||||||||| ||||||||||    
T  33910142 tgatatttgttcaaccattttttgacaactttctctctcatactcacat 33910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 39458674 - 39458722
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||||    
T  39458674 tgatatctgtacaaccagtttttgacaactttctctctcatactcacat 39458722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 6758827 - 6758796
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  6758827 ttttgtgacaactttctctcttatactcacat 6758796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 2117671 - 2117630
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  2117671 tgtacaacaactttgtgacaactttctctctcatactcacat 2117630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 16143396 - 16143429
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttct 281  Q
    |||||| |||||||||||||||||||||||||||    
T  16143396 tgatatttgtacaaccattttgtgacaactttct 16143429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 4434488 - 4434536
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| |||||| ||| ||||| ||||||||||    
T  4434488 tgatatttgtacaaccattttttgacaattttttctctcatactcacat 4434536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 5130432 - 5130384
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||| | | ||||||||||||| |||||| ||||||||||    
T  5130432 tgatatatgtacatctactttgtgacaacttactctctcatactcacat 5130384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 39191872 - 39191840
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    ||||| |||||||||||||||||||||||||||    
T  39191872 attttttgacaactttctctcttatactcacat 39191840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 34264600 - 34264658
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||  ||||||||    
T  34264600 tgatatttgtacgaccattttgtgacaactttcgctcttatactcacattatgttttta 34264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 2469709 - 2469757
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  2469709 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 2469757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 3062348 - 3062396
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||    
T  3062348 tgatatttgaacatccattttgtgacaactttctctcttatactcacat 3062396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 22330685 - 22330637
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  22330685 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 22330637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 37352044 - 37351996
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  37352044 tgatatttgtacaaccactttgtgacaactttctctctcatactcacat 37351996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 31274594 - 31274547
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcaca 295  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||||    
T  31274594 tgatatttgtacaaccaatttgtgacaactttttctcttatactcaca 31274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 2323310 - 2323359
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||||| |||||||| ||||| |||||||||||||||| |||||||||||    
T  2323310 tgatatttgtacaacaattttatgacaactttctctctcatactcacatg 2323359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 7817655 - 7817703
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  7817655 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 7817703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 37856219 - 37856171
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||| ||||  ||||||||||    
T  37856219 tgatatttgtacaaccattttgtgacaactttatctcacatactcacat 37856171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 41985154 - 41985106
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  41985154 tgatatttgtacaatcaatttgtgacaactttctctctcatactcacat 41985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 5174588 - 5174557
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  5174588 ttttgtgacaactttctctcttatactcacat 5174557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 25887600 - 25887647
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcaca 295  Q
    |||||| |||||| ||| |||||||||||||||||||| |||||||||    
T  25887600 tgatatttgtacatccactttgtgacaactttctctctcatactcaca 25887647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 41430188 - 41430157
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  41430188 ttttgtgacaactttctctcttatactcacat 41430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 45431971 - 45432014
Alignment:
Q  249 gatatatgtacaaccattttgtgacaactttctctcttatactc 292  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||    
T  45431971 gatatttgtacaaccactttgtgacaactttatctcttatactc 45432014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 26041335 - 26041381
Alignment:
Q  256 gtacaaccattttgtgacaactttctctcttatactcacatgttgtt 302  Q
    ||||||||||||| |||||||||||||| | ||||||||||| ||||    
T  26041335 gtacaaccattttatgacaactttctctttcatactcacatgatgtt 26041381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 43444641 - 43444707
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||| ||||  | ||||||| ||||||    
T  43444641 tgatatttgtacaaccactttatgacaactttctctctcatacttacatcatatttttactctctct 43444707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 47448861 - 47448903
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  47448861 ttttgtgacaactttctctctcatactcacattgtgtttttac 47448903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 10619746 - 10619705
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||| |||| |||||||||||||||| ||||||||||    
T  10619746 tgtacaacctttttttgacaactttctctctcatactcacat 10619705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 31785525 - 31785468
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttt 305  Q
    |||||| |||||||||| ||| ||| |||||||||||| ||||||||||  |||||||    
T  31785525 tgatatttgtacaaccactttatgaaaactttctctctcatactcacattgtgttttt 31785468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 34108891 - 34108842
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||| ||||||    
T  34108891 ttttgtgacaattttctctctcatactcacattatgtttttactctctct 34108842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 237030 - 237078
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| || |||||||||||||| ||||| ||||||||||    
T  237030 tgatatttgtacaatcaatttgtgacaactttatctctcatactcacat 237078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 3937159 - 3937127
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||| ||||||||||    
T  3937159 attttgtgacaactttctctctcatactcacat 3937127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 6822587 - 6822539
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| | |||||||| ||||| ||||||||||    
T  6822587 tgatatttgtacaaccattttctaacaactttttctctcatactcacat 6822539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 11353011 - 11352979
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||| ||||||||||    
T  11353011 attttgtgacaactttctctctcatactcacat 11352979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 12007222 - 12007190
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  12007222 ttttgtgacaactttctctctcatactcacatg 12007190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 22925334 - 22925278
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    ||||||||||||| ||||| | |||||| ||||||| ||||||||||  ||||||||    
T  22925334 atatatgtacaactatttttttacaactatctctctcatactcacattatgttttta 22925278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 25272608 - 25272656
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||   ||||||||||||| |||||||||||    
T  25272608 tgatatttgtacaaccatttttgtacaactttctctcatatactcacat 25272656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 29723963 - 29723931
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  29723963 ttttgtgacaactttctctctcatactcacatg 29723931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 33224857 - 33224889
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||| ||||||||||    
T  33224857 attttgtgacaactttctctctcatactcacat 33224889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 35293134 - 35293182
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| ||||||| |||||||||||| ||||||||||||||    
T  35293134 tgatatttgaacatccattttttgacaactttctttcttatactcacat 35293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 37832456 - 37832504
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||| |||||||||||||| | ||||| ||||||||||    
T  37832456 tgatatttgtacaactattttgtgacaactctttctctcatactcacat 37832504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 38547344 - 38547296
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||| ||||| |||||||||||| ||| ||||||||||    
T  38547344 tgatatttgtacaactattttttgacaactttctttctcatactcacat 38547296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 45556012 - 45556048
Alignment:
Q  270 tgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  45556012 tgacaactttctatctcatactcacatgttgttttta 45556048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 32365721 - 32365667
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtt 302  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  32365721 tgatatttgtacaaccattttgtgacaactttctctctcatattcacatgatgtt 32365667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 32621644 - 32621710
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||  | ||||||| ||||||    
T  32621644 tgatatttgcacaaccattttgtgacaactttctctctaatactcacattctatttttactctctct 32621710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 28676206 - 28676158
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  28676206 tgatatttgtacaaccattttgtgacaactttctctttcatactcacat 28676158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 39241355 - 39241307
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  39241355 tgatatttgtacaaccaatttgtgacaactttctctctcatactcacat 39241307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 42490926 - 42490985
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||||  |||||||||    
T  42490926 tgatatttgtacaaccactttttgacaactttctctctcatactcacattatgtttttac 42490985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 47839605 - 47839522
Alignment:
Q  39 cttaattttaataaaaattttagtctttataaaattttatgcgcacaaatttagttcttcttaaaaccaaatttgtttaactaa 122  Q
    |||||||||||||| | |||||||||||||||  |||| ||| |||| ||||||| |||| |||||  ||||||||| ||||||    
T  47839605 cttaattttaataatatttttagtctttataattttttttgcacacagatttagtccttcataaaagaaaatttgttgaactaa 47839522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 46686251 - 46686308
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  46686251 tgatatttgtacaaccattttgt-acaactttctctctcatactcacattatgttttta 46686308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 54036583 - 54036538
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||    
T  54036583 tgatatttgtacaaccattttgtgacaactttatctctcatactca 54036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 56474800 - 56474751
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| ||||||    
T  56474800 ttttgtgacaattttctctcttatactcacattatgtttttactctctct 56474751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 4511831 - 4511879
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||| ||||||||| |||||||||||||||| ||||||||||    
T  4511831 tgatatttgtataaccattttatgacaactttctctctcatactcacat 4511879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 5386390 - 5386438
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||||||||||| |||||||||||||||| ||||||||||    
T  5386390 tgatatttgaacaaccattttttgacaactttctctctcatactcacat 5386438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 17367109 - 17367153
Alignment:
Q  263 cattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||||||||||||||||||||||||||| |||  |||||||||    
T  17367109 cattttgtgacaactttctctcttatactcgcattatgtttttac 17367153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 28657494 - 28657446
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  28657494 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 28657446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 30778318 - 30778270
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||| ||| |||||||||||||||||||| ||||||||||    
T  30778318 tgatatttgtacagccaatttgtgacaactttctctctcatactcacat 30778270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 31657664 - 31657712
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  31657664 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 31657712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 39605985 - 39606032
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  39605985 tgatatatgaacaaccatttt-tgacaactttctctctcatactcacat 39606032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 43769729 - 43769777
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  43769729 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 43769777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 46173556 - 46173604
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||||||||||||||||||||  |||||||||    
T  46173556 tgatatttgtacaaccactttgtgacaactttctctctcgtactcacat 46173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 48326558 - 48326606
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||| ||||| ||||||||||    
T  48326558 tgatatttgtacaaccactttgtgacaactttttctctcatactcacat 48326606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 2109449 - 2109508
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||| ||||||||||| || |||||||||||||| | ||||||||||  |||||||||    
T  2109449 tgatatttgtacaaccatcttttgacaactttctctttcatactcacattatgtttttac 2109508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 24020017 - 24019978
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatactcac 294  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  24020017 tgtacaaccattttgtgacaactttctctctcacactcac 24019978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 1840601 - 1840643
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatac 290  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  1840601 tgatatttgaacaaccattttgtgataactttctctcttatac 1840643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 37731932 - 37731990
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| ||||||| |||||||  |||||||||||||| ||||||||||  ||||||||    
T  37731932 tgatatttgtacaatcattttggtacaactttctctctcatactcacattatgttttta 37731990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 1627610 - 1627553
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||| ||||||| |||||| |||||||||||||||| |||||| |||  |||||||||    
T  1627610 atatttgtacaatcattttttgacaactttctctctcatactcgcattatgtttttac 1627553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 5249904 - 5249945
Alignment:
Q  266 tttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    |||||||||||||||||||| ||||||||||  |||||||||    
T  5249904 tttgtgacaactttctctctcatactcacattatgtttttac 5249945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 17683257 - 17683290
Alignment:
Q  263 cattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||||||||||||||||    
T  17683257 cattttatgacaactttctctcttatactcacat 17683290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 37022278 - 37022327
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||||| |||||||||||||||  |||||||| ||||| |||||||||||    
T  37022278 tgatatttgtacaaccattttgatacaactttatctctcatactcacatg 37022327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 41119535 - 41119498
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctct 285  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  41119535 tgatatttgtacaaccactttgtgacaactttctctct 41119498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 15515809 - 15515849
Alignment:
Q  256 gtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||| ||||| |||||||||||||||| ||||||||||    
T  15515809 gtacaactattttatgacaactttctctctcatactcacat 15515849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 24310575 - 24310527
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||   |||||||||||||| ||||||||||    
T  24310575 tgatatttgtacaaccatttttgtacaactttctctctcatactcacat 24310527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 29974381 - 29974333
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||||| |||||||||||||||||||| | ||||||||||    
T  29974381 tgatatttgaacaactattttgtgacaactttctctttcatactcacat 29974333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 38519828 - 38519860
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  38519828 ttttgtgacaactttctctctcatactcacatg 38519860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 51255781 - 51255813
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacatg 297  Q
    ||||||||||||||||||||| |||||||||||    
T  51255781 ttttgtgacaactttctctctcatactcacatg 51255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 31151125 - 31151067
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    ||||||||||||||| ||||| ||| |||||||||| | ||||||||||||||||||||    
T  31151125 tgatatatgtacaactattttatgagaactttctctttcatactcacatgttgttttta 31151067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 29795453 - 29795501
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  29795453 tgatatttgtacaaccattttgtgacaactttctctcacatactcacat 29795501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 38600831 - 38600879
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  38600831 tgatatatgtacatccattttttgacaactttctctctcatactcacat 38600879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 24727432 - 24727490
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||| |||||||||||||||  |||||||||||||| ||||||||||  ||||||||    
T  24727432 tgatatttgtacaaccattttggtacaactttctctctcatactcacattatgttttta 24727490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 7121396 - 7121453
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgttttt 305  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||  |||||||    
T  7121396 tgatatttgtataaccattttgtaacaactttctctctcatactcacattatgttttt 7121453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 37966373 - 37966422
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||||| |||||||||| |||||||||||||| ||||| |||||||||||    
T  37966373 tgatatttgtacaaccaatttgtgacaactttttctctcatactcacatg 37966422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 6646841 - 6646889
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  6646841 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 6646889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 22353229 - 22353181
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| ||||||||||||||||||| ||| ||||||||||    
T  22353229 tgatatttgtacaatcattttgtgacaactttctttctcatactcacat 22353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 25801867 - 25801819
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| |||||||||||||| ||||| ||||||||||    
T  25801867 tgatatttgtacaaccaatttgtgacaactttatctctcatactcacat 25801819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 26277113 - 26277161
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||| ||||||||||||||||||||||||||||    
T  26277113 tgatatttgaacatccatttagtgacaactttctctcttatactcacat 26277161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 32755697 - 32755733
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctc 284  Q
    |||||||||||||||||||||| ||||||||||||||    
T  32755697 tgatatatgtacaaccattttgagacaactttctctc 32755733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 32972960 - 32972912
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  32972960 tgatatttgaacatccattttgtgacaactttctctctcatactcacat 32972912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 40504261 - 40504301
Alignment:
Q  267 ttgtgacaactttctctcttatactcacatgttgtttttac 307  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  40504261 ttgtgacaaatttctctcttatactcacattttgtttttac 40504301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 44018069 - 44018117
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||||||||||||||||||||| || || ||||||||||    
T  44018069 tgatatttgtacaaccattttgtgacaactttttcactcatactcacat 44018117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 6895930 - 6895961
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  6895930 ttttgtgacaactttctctcttatactcacat 6895961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 9990725 - 9990756
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  9990725 ttttgtgacaactttctctcttatactcacat 9990756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 34431863 - 34431832
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  34431863 ttttgtgacaactttctctcttatactcacat 34431832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 43057099 - 43057130
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  43057099 ttttgtgacaactttctctcttatactcacat 43057130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 8482286 - 8482220
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    |||||| |||||||||| ||| |||||||||||||||| ||| ||||||  | ||||||| ||||||    
T  8482286 tgatatttgtacaaccactttatgacaactttctctctcatattcacattatatttttaccctctct 8482220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 296
Target Start/End: Complemental strand, 23352944 - 23352910
Alignment:
Q  262 ccattttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||||| ||||||||||    
T  23352944 ccattttgtgacaactttctctctcatactcacat 23352910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 42607584 - 42607530
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtt 302  Q
    |||||| |||||||  |||||||||||| ||||||||| ||||||||||| ||||    
T  42607584 tgatatttgtacaattattttgtgacaattttctctctcatactcacatgctgtt 42607530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 10550513 - 10550468
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    ||||||||||||||| ||||| | |||||||||||||| |||||||    
T  10550513 tgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 2971867 - 2971823
Alignment:
Q  249 gatatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||    
T  2971867 gatatttgaacatccattttgtgacaactttctctctcatactca 2971823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 3012899 - 3012851
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||| ||||    
T  3012899 tgatatttgaacatccattttgtgacaactttctctctcatacttacat 3012851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 4432353 - 4432389
Alignment:
Q  270 tgacaactttctctcttatactcacatgttgttttta 306  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  4432353 tgacaactttctctctcatattcacatgttgttttta 4432389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 12600081 - 12600113
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||| ||||||||||    
T  12600081 attttgtgacaactttctctctcatactcacat 12600113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 15141479 - 15141527
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||| | ||||| |||||||||||||||| ||||||||||    
T  15141479 tgatatttgtacatctattttatgacaactttctctctcatactcacat 15141527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 19695745 - 19695697
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| || ||| |||||||||||||||||||| ||||||    
T  19695745 tgatatttgtacaatcactttttgacaactttctctcttatattcacat 19695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 28013975 - 28014019
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcac 294  Q
    |||| |||||||||| ||| |||||||||||||||| ||||||||    
T  28013975 atatttgtacaaccaatttttgacaactttctctctcatactcac 28014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 40496367 - 40496415
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||| | ||| ||| |||||||||||||||| ||||||||||    
T  40496367 tgatatatgtaaatccactttttgacaactttctctctcatactcacat 40496415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 42081054 - 42081102
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||| ||| ||| |||||||||||||||| ||||||||||    
T  42081054 tgatatttgtacagccactttttgacaactttctctctcatactcacat 42081102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 42678767 - 42678815
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  42678767 tgatatttgaacatccatttagtgacaactttctctctcatactcacat 42678815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 45202186 - 45202138
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| | |||||||||||||| ||| ||||||    
T  45202186 tgatatttgtacaaccatttttttacaactttctctctcatattcacat 45202138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 31654 - 31606
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||||    
T  31654 tgatatttgtacaaccattttttgacaactttctctctcatactcacat 31606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 296
Target Start/End: Complemental strand, 5028305 - 5028271
Alignment:
Q  262 ccattttgtgacaactttctctcttatactcacat 296  Q
    |||||||||||||||||||||||||||||||||||    
T  5028305 ccattttgtgacaactttctctcttatactcacat 5028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 32644629 - 32644695
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatgttgtttttacactctct 314  Q
    |||||| |||||||| ||||| |||||||||||||||| ||||||||||  | ||||||| ||||||    
T  32644629 tgatatttgtacaactattttttgacaactttctctctcatactcacattatatttttactctctct 32644695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 12441544 - 12441593
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacatg 297  Q
    |||||| |||||||| | |||||||||||||||||||| |||||||||||    
T  12441544 tgatatttgtacaactactttgtgacaactttctctctcatactcacatg 12441593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 1376399 - 1376430
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  1376399 ttttgtgacaactttctctcttatactcacat 1376430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 1384147 - 1384178
Alignment:
Q  265 ttttgtgacaactttctctcttatactcacat 296  Q
    ||||||||||||||||||||||||||||||||    
T  1384147 ttttgtgacaactttctctcttatactcacat 1384178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 17442841 - 17442887
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||| ||||||||||||||   |||||||||||||||||||||||||    
T  17442841 atatttgtacaaccatttttgtacaactttctctcttatactcacat 17442887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 12177590 - 12177631
Alignment:
Q  255 tgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||||| |||||||||||||||||||| | ||||||||||    
T  12177590 tgtacaactattttgtgacaactttctctttcatactcacat 12177631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 28748130 - 28748175
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactca 293  Q
    |||||| || ||| |||||||||||||||||||||||| |||||||    
T  28748130 tgatatttgaacatccattttgtgacaactttctctctcatactca 28748175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 32149508 - 32149549
Alignment:
Q  250 atatatgtacaaccattttgtgacaactttctctcttatact 291  Q
    |||| |||||||||| |||||||||||||||||||| |||||    
T  32149508 atatttgtacaaccactttgtgacaactttctctctcatact 32149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 1196064 - 1196112
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| ||||||| || ||| |||||||||||||||| ||||||||||    
T  1196064 tgatatttgtacaatcactttttgacaactttctctctaatactcacat 1196112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 293
Target Start/End: Original strand, 7093 - 7122
Alignment:
Q  264 attttgtgacaactttctctcttatactca 293  Q
    ||||||||||||||||||||||||||||||    
T  7093 attttgtgacaactttctctcttatactca 7122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 3325 - 3277
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| |||||||||| ||| | |||||||||||||| ||||||||||    
T  3325 tgatatttgtacaaccactttctcacaactttctctctcatactcacat 3277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 44792 - 44840
Alignment:
Q  248 tgatatatgtacaaccattttgtgacaactttctctcttatactcacat 296  Q
    |||||| || ||| |||||||||||||||||||||||| ||||| ||||    
T  44792 tgatatttgaacatccattttgtgacaactttctctctcatacttacat 44840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 293
Target Start/End: Original strand, 12532 - 12560
Alignment:
Q  265 ttttgtgacaactttctctcttatactca 293  Q
    |||||||||||||||||||||||||||||    
T  12532 ttttgtgacaactttctctcttatactca 12560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 36035 - 36067
Alignment:
Q  264 attttgtgacaactttctctcttatactcacat 296  Q
    ||||| |||||||||||||||||||||||||||    
T  36035 attttttgacaactttctctcttatactcacat 36067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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