View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16592_high_63 (Length: 316)
Name: NF16592_high_63
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16592_high_63 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 23188299 - 23188574
Alignment:
| Q |
1 |
aattcaaaaagaaaaccaaatttagtttcgtagctgatacaaattgcaaaaggtcatagcatcaaatat--atattaacaaaattcattttgaaaaattg |
98 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
23188299 |
aattcaaaaagaaaaccaaatttagtttcgtagctgatgcaaattgcaaaaggtcatagcatcaaatatatatattaacaaaattcattttgaaaaattg |
23188398 |
T |
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| Q |
99 |
tcaaactcttgtttctgcgttgtgcttttctcggttctatgaggtgcttcgtgcacaaacaatgtatagcagattgtgtcatcttctagcatggtttgtt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
23188399 |
tcaaactcttgtttctgcgttgtgcttttctcggttctatgaggtgcttcgtgcacaaacaatgtatagcagattgtgtcatcttctagcatgg-ttgtt |
23188497 |
T |
|
| Q |
199 |
cttgcgttgtgtatttaatagttagattttatttaaaatataataaaatttgaaaccctattcgaatagaatattta |
275 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23188498 |
cttgcattgtgtatttaatagttagattttatttaaaatataataaaatttgaaaccctattcgaatagaatattta |
23188574 |
T |
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