View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16592_high_90 (Length: 254)
Name: NF16592_high_90
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16592_high_90 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 33825401 - 33825175
Alignment:
| Q |
18 |
gttgagacaaggaagaaatattaagaaactaatcaagtgttttgctattagctaatttttgattaaatttcaaggtattttataattaaatcttcgtgat |
117 |
Q |
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| T |
33825401 |
gttgagacaatgaagaaatattaagaaactaatcaagtgttttgctattagcaaatttttaattaaatttcaaggtattttataattaaatcttcgtgat |
33825302 |
T |
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| Q |
118 |
taaaataaaatcatagaattattttttggtttgnnnnnnnttattataattagtgtcctccatatatagaactttagacctactttgaattcctttgata |
217 |
Q |
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||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33825301 |
taaaataaaatcatagaattattttttggttagaaaaaaattattataattagtgtcctccatatatagaactttagacctactttgaattcctttgata |
33825202 |
T |
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| Q |
218 |
aatcaatcctccattagaactcctttg |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
33825201 |
aatcaatcctccattagaactcctttg |
33825175 |
T |
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