View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16592_low_33 (Length: 427)
Name: NF16592_low_33
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16592_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 6 - 404
Target Start/End: Original strand, 35855512 - 35855906
Alignment:
| Q |
6 |
aggagcagagaattgggggaatctgaaaccagaatggaaactttgtgggaatggaaaattacaatctccaattgatatcctaaacaaaagggtgcaagaa |
105 |
Q |
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| T |
35855512 |
aggaccagagaactgggggaatctgaaaccagaatggaaactttgtgggaatggaaaattacaatctccaattgatatcctaaacaaaagggtgcaagaa |
35855611 |
T |
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| Q |
106 |
cttcctcaacttggtaaacttgaaaaagattacaaactaggtcctgctttcctaaagaataggtttaatgatgtcatggtaagccactaagtgcattttt |
205 |
Q |
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| T |
35855612 |
cttcctcaacttggtaaacttgaaaaagattacaaactaggtcctgctttcctaaagaataggtttaatgatgtcatggtaagccactaagtgcattttt |
35855711 |
T |
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| Q |
206 |
aattaaacaattataaatacacattttgcttaaggagactaatatacgtacgtacttaatgtttcgacagctccaatggaaaggttatgcaggtaagctt |
305 |
Q |
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| T |
35855712 |
aattaaacaattataaatacacattttgcttaaggagactaata----tacgtgcttaatgtttcgacagctccaatggaaaggttatgcaggtaagctt |
35855807 |
T |
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| Q |
306 |
aatctaaatggaacttactacaaactaatacaatgtcattggcatacaccttcagagcacacattgaatggatcaaagtgagtataagttcttaagata |
404 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
35855808 |
aatctaaatggaacttactacaaactaatacaatgtcattggcatacaccttcagagcacacattgaatggatcaaagtgggtataagttcttaagata |
35855906 |
T |
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