View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16592_low_77 (Length: 285)
Name: NF16592_low_77
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16592_low_77 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 285
Target Start/End: Original strand, 11477808 - 11478075
Alignment:
| Q |
18 |
tcagggtcgtctccaccgtacaagaaaatgtactttccttccttaatctgttcaatcagaaatttaaatattgattactttaaatatagtgtatgtaata |
117 |
Q |
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| T |
11477808 |
tcagggtcgtctccaccgtacaagaaaatgtactttccttccttaatctgttcaatcagaaatttaaatattgattactttaaatatagtgtatgtaata |
11477907 |
T |
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| Q |
118 |
gagaaatattgattagggataaaaagagatttttctatagctagaatataagcttacccagttcaatatttccgagtcaatgccatcgacaagcaattca |
217 |
Q |
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| T |
11477908 |
gagaaatattgattagggataaaaagagatttttctatagctagaatataagcatacccagttcaatatttccgagtcaatgccatccacaagcaattca |
11478007 |
T |
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| Q |
218 |
agtctccaagtctcatccttccaaagagtttcttctttaaaacttgtaaaaggaaaagcagcacttcc |
285 |
Q |
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| T |
11478008 |
agtctccaagtctcatccttccaaagagtttcttctttaaaacttgtaaaaggaaaagcagcacttcc |
11478075 |
T |
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