View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16592_low_90 (Length: 264)
Name: NF16592_low_90
Description: NF16592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16592_low_90 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 30483108 - 30483334
Alignment:
| Q |
14 |
tgagaagaaactatactaaatactaaatggtcaactaattgacagcaagttatcttatctcacgattaaattgacttaaatataaaatcctagaggatat |
113 |
Q |
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| T |
30483108 |
tgagaagaaactatactaaatactaaatggtcaactaattgacagcaagttatcttatctcacgattaaattgacttaaatataaaatcctagaggatat |
30483207 |
T |
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| Q |
114 |
tctcatctggcagataaacaaatcattcaatattggacagttgaaaattaaaaatcagataatctctagctataatatataaatgggaattaaatggaga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30483208 |
tctcatctggcagataaacaaatcattcaatattggacagttgaaaattaaaaatcagataatctctagctataatatataaatgggaattaaatggaga |
30483307 |
T |
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| Q |
214 |
ttgatttacttgtctgagttatatata |
240 |
Q |
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||||||||||||||||||||||||||| |
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| T |
30483308 |
ttgatttacttgtctgagttatatata |
30483334 |
T |
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