View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16593_low_11 (Length: 226)
Name: NF16593_low_11
Description: NF16593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16593_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 42358648 - 42358452
Alignment:
| Q |
19 |
aaaccgatggaatgaaaacgagtaacgaagttcgtaacagaattgagagaactgagatcaagtgccataactataatctccgcttcaggacactccgtca |
118 |
Q |
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| T |
42358648 |
aaaccgatggagtgaaaacgagtaacgaagttcgtaacagaattgacagaactgagatcaagtgccataactataatctccgcttcaggacactccgtca |
42358549 |
T |
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| Q |
119 |
ctattctacctcttgtttcctccgcatttttcatgctacgcgccggtagaatcaccctcgcccctctcttcgccaaaacacgcgccgtctctgctcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
42358548 |
ctattctacctcttgtttcctccgcatttttcatgctacgcgccggtagaatcaccctcgcccctctcttcgccaaaacacgcgccgtttctgctcc |
42358452 |
T |
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