View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16593_low_7 (Length: 300)
Name: NF16593_low_7
Description: NF16593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16593_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 269
Target Start/End: Complemental strand, 45388396 - 45388145
Alignment:
| Q |
18 |
gttatgacatcattcacctttatcatatatcaaaaaacattacttgtactatatttcttcatcaaaactcgaccttcctcttccatccaaagtttaatga |
117 |
Q |
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| T |
45388396 |
gttatgacatcattcacctttatcatatatcaaaaaacattacttgtactatatttcttcatcaaaactcgaccttcctcttccatccaaagtttaatga |
45388297 |
T |
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| Q |
118 |
ttannnnnnnagcgaaaagtgtgtcttatatcatttgacgttaaaggacatgtaatggagtaatttgttaaaccagtcatatttttgttttgcgttcttt |
217 |
Q |
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| T |
45388296 |
ttatttttttagcgaaacgtgtgtcttatatcatttgacgttaaaggacatgtaatggagtaatttgttaaaccaatcatatttttgttttgcgttcttt |
45388197 |
T |
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| Q |
218 |
ttaacatgcattgatgcacttcgggagctgggatcaaatctaggatcgagtc |
269 |
Q |
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| T |
45388196 |
ttaacatgcattgatgcacttcgggagttgggatcaaatctaggatcgagtc |
45388145 |
T |
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