View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16593_low_9 (Length: 252)
Name: NF16593_low_9
Description: NF16593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16593_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 235
Target Start/End: Original strand, 34944335 - 34944564
Alignment:
| Q |
6 |
agtgagaagaatatattaatagcattctttgtgaataaataaagcattagagtttgattaattcagtgagaagataactnnnnnnnnnnnnnnnnnnnnt |
105 |
Q |
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| T |
34944335 |
agtgaaaagaatatattaatagcattctttgtgaataaataaagcattagagtttgattaattcagtgagaagataactaaaaacaaaagaaagaaaaat |
34944434 |
T |
|
| Q |
106 |
aggaattattttcatgccataagacttgattagtaggctagattactgcttagggtttgtgtaaaactcttccagccagtaaagcagcttccatgacaat |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34944435 |
aggaattattttcatgccataagacttgattagtaggcaagattactgcttagggtttgtgtaaaactcttccagccagtaaagcagcttccatgacaat |
34944534 |
T |
|
| Q |
206 |
cttgattacttcaataacatcatctgcttg |
235 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
34944535 |
cttgattacttcaataacatcatctgcttg |
34944564 |
T |
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