View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16594_low_13 (Length: 250)

Name: NF16594_low_13
Description: NF16594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16594_low_13
NF16594_low_13
[»] chr2 (18 HSPs)
chr2 (7-201)||(4512189-4512383)
chr2 (7-201)||(14714575-14714769)
chr2 (7-134)||(26205096-26205223)
chr2 (24-200)||(12852986-12853162)
chr2 (15-201)||(41296293-41296479)
chr2 (24-201)||(23177774-23177951)
chr2 (24-201)||(23589031-23589208)
chr2 (63-200)||(6708819-6708956)
chr2 (43-144)||(3532313-3532414)
chr2 (15-187)||(3528117-3528290)
chr2 (43-142)||(7983593-7983692)
chr2 (9-142)||(35799597-35799730)
chr2 (24-105)||(11575421-11575502)
chr2 (7-47)||(14716188-14716228)
chr2 (7-45)||(3665307-3665345)
chr2 (24-142)||(7037066-7037184)
chr2 (15-64)||(8537103-8537152)
chr2 (165-201)||(14714901-14714937)
[»] chr8 (26 HSPs)
chr8 (7-197)||(13513503-13513693)
chr8 (7-197)||(13603036-13603226)
chr8 (7-201)||(21670147-21670341)
chr8 (7-201)||(44103133-44103329)
chr8 (14-201)||(10052194-10052381)
chr8 (7-191)||(21961906-21962090)
chr8 (86-240)||(15116713-15116856)
chr8 (24-201)||(36756164-36756342)
chr8 (16-201)||(13363417-13363602)
chr8 (9-201)||(39325672-39325865)
chr8 (24-201)||(7486177-7486354)
chr8 (24-201)||(39546516-39546693)
chr8 (24-190)||(117148-117313)
chr8 (26-148)||(37276135-37276257)
chr8 (24-152)||(45194583-45194713)
chr8 (25-159)||(21267233-21267368)
chr8 (24-94)||(35944008-35944078)
chr8 (6-105)||(13366985-13367084)
chr8 (24-141)||(44606239-44606356)
chr8 (7-47)||(13514858-13514898)
chr8 (7-47)||(13604391-13604431)
chr8 (165-201)||(37276065-37276101)
chr8 (7-47)||(39323870-39323910)
chr8 (24-134)||(8095446-8095556)
chr8 (39-115)||(39220794-39220870)
chr8 (7-47)||(44102032-44102072)
[»] chr3 (13 HSPs)
chr3 (7-186)||(7483379-7483558)
chr3 (7-201)||(17349941-17350135)
chr3 (15-201)||(39133108-39133294)
chr3 (24-201)||(53808418-53808595)
chr3 (7-200)||(11219513-11219706)
chr3 (17-201)||(32979181-32979365)
chr3 (21-201)||(34902833-34903013)
chr3 (24-201)||(47765538-47765716)
chr3 (24-134)||(12062290-12062400)
chr3 (24-201)||(8371320-8371497)
chr3 (7-159)||(31638201-31638352)
chr3 (101-179)||(7483254-7483331)
chr3 (25-91)||(19622106-19622172)
[»] chr7 (8 HSPs)
chr7 (7-201)||(24494888-24495084)
chr7 (24-159)||(14108952-14109087)
chr7 (24-159)||(14418909-14419044)
chr7 (86-200)||(35315077-35315191)
chr7 (43-201)||(4167570-4167728)
chr7 (30-141)||(131898-132009)
chr7 (24-94)||(25154882-25154952)
chr7 (24-69)||(26406225-26406270)
[»] chr4 (18 HSPs)
chr4 (7-201)||(2293363-2293558)
chr4 (7-186)||(36604694-36604874)
chr4 (7-200)||(38418857-38419050)
chr4 (16-201)||(43894197-43894382)
chr4 (15-201)||(29687817-29688003)
chr4 (17-156)||(44302813-44302952)
chr4 (24-201)||(11094626-11094801)
chr4 (24-201)||(35787896-35788073)
chr4 (24-159)||(39592170-39592305)
chr4 (24-176)||(6616074-6616227)
chr4 (101-159)||(36604588-36604646)
chr4 (83-201)||(52980143-52980261)
chr4 (26-126)||(17494229-17494329)
chr4 (24-91)||(86903-86970)
chr4 (42-143)||(26393024-26393125)
chr4 (24-105)||(28102176-28102257)
chr4 (107-191)||(47668453-47668538)
chr4 (13-57)||(306666-306710)
[»] chr1 (18 HSPs)
chr1 (7-201)||(51218804-51218999)
chr1 (14-201)||(50678453-50678639)
chr1 (24-200)||(14764329-14764505)
chr1 (15-201)||(30551428-30551614)
chr1 (24-200)||(26055987-26056163)
chr1 (15-201)||(37624409-37624595)
chr1 (27-201)||(52742815-52742989)
chr1 (15-201)||(27689374-27689564)
chr1 (7-111)||(44977304-44977408)
chr1 (24-139)||(9633875-9633990)
chr1 (15-201)||(23081965-23082151)
chr1 (24-107)||(49141429-49141512)
chr1 (15-143)||(22766717-22766845)
chr1 (76-129)||(51300168-51300221)
chr1 (6-105)||(21277076-21277175)
chr1 (7-45)||(25889487-25889525)
chr1 (7-45)||(48935105-48935143)
chr1 (7-47)||(51217701-51217741)
[»] scaffold0015 (1 HSPs)
scaffold0015 (7-191)||(207647-207831)
[»] scaffold0084 (1 HSPs)
scaffold0084 (7-201)||(13043-13237)
[»] chr5 (6 HSPs)
chr5 (6-201)||(21387719-21387914)
chr5 (43-142)||(7426760-7426859)
chr5 (6-184)||(18693780-18693957)
chr5 (24-142)||(40058118-40058236)
chr5 (24-105)||(5383042-5383123)
chr5 (39-134)||(2167421-2167516)
[»] scaffold0051 (1 HSPs)
scaffold0051 (17-201)||(39740-39924)
[»] scaffold0098 (1 HSPs)
scaffold0098 (39-200)||(41023-41184)
[»] chr6 (5 HSPs)
chr6 (24-189)||(18139337-18139503)
chr6 (120-201)||(34084073-34084154)
chr6 (15-90)||(13507121-13507196)
chr6 (26-173)||(33801884-33802031)
chr6 (6-70)||(27440145-27440209)
[»] scaffold1974 (1 HSPs)
scaffold1974 (24-201)||(467-644)
[»] scaffold1878 (1 HSPs)
scaffold1878 (24-201)||(630-807)
[»] scaffold0290 (1 HSPs)
scaffold0290 (24-139)||(9379-9494)
[»] scaffold0003 (1 HSPs)
scaffold0003 (6-70)||(47152-47216)
[»] scaffold0178 (1 HSPs)
scaffold0178 (27-134)||(1314-1419)
[»] scaffold0046 (1 HSPs)
scaffold0046 (7-47)||(24808-24848)


Alignment Details
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 4512189 - 4512383
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||| |||||| ||||||| |||||||||||||||||||||    
T  4512189 tcttcttccgttacctcttttggtcctctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaat 4512288  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| ||| || ||||||||||||||||||||||| | ||| ||||||||||  |||||||||| ||||||||||||||||| |||||||||||    
T  4512289 ttttttaattttgaccatttgattttttctttaaaagatgaccgttgaatcatgtggggtctattatactttactgtgaaccattcacacctaat 4512383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 14714575 - 14714769
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||| |||||| ||||||||| |||||||||| ||| ||||||||| |||||||||||    
T  14714575 tcttcttccgttaccacttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaat 14714674  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| |||   |||||||||||||||||||||||| | ||| ||||||||||   | |||||||||| |||||||||||||||| |||||||||    
T  14714675 ttttttaattgcaaccatttgattttttctttaaaagatgaccgttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaat 14714769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 26205096 - 26205223
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||| |||||| ||||||||| |||| ||||||||| |||||||||||||||||||||    
T  26205096 tcttcttccgttacctcgtttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaat 26205195  T
Q  107 tttttgaatattaaccatttgatttttt 134  Q
    ||||| ||| ||||||||||||||||||    
T  26205196 tttttaaattttaaccatttgatttttt 26205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 12852986 - 12853162
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||| ||||||||| |||  | ||||||||| |||||||||| ||| | |||||||  || |||||| ||||||||| |||||||    
T  12852986 ttttggtcatctccgttagattttaacatcaaaaatctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttgaattttaacca 12853085  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaa 200  Q
    |||||||| |||||||||| |||||  |||||| ||   | |||||||||||||| |||| ||||||| ||||||||    
T  12853086 tttgatttattctttaaaagaggaccattgaattatgtagagtctattgtactttcctgtcaaccactaacacctaa 12853162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 41296479 - 41296293
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    ||||| ||||||||||| ||||| |||||||||||||  |||||| ||| |||||||||||| ||| ||| | ||||||    |||| ||| ||||| ||    
T  41296479 cgttatctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaatcatattaaaaggtggtgcaccatggatcttagtaaattttttaa 41296380  T
Q  115 tattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    |||||||| ||||||||||||||||||| |||| ||||  |||||   || ||||||||| |||| |||||| |||| |||||||||    
T  41296379 tattaaccttttgattttttctttaaaagaggattgttcgatcatgtaggatctattgtattttagtgtgaatcactaacacctaat 41296293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 23177774 - 23177951
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| |||  | |||| |||| ||||||||||  || | |||| ||   |||||||| ||||  ||| |||||||    
T  23177774 ttttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 23177873  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||   |||| ||||||| ||   ||||||||||||||||||||||||||||| |||||||||    
T  23177874 tttgattttttctttaaatgcggaccgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaat 23177951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 23589031 - 23589208
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| |||  | |||| |||| ||||||||||  || | |||| ||   |||||||| ||||  ||| |||||||    
T  23589031 ttttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 23589130  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||   |||| ||||||| ||   ||||||||||||||||||||||||||||| |||||||||    
T  23589131 tttgattttttctttaaatgcggaccgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaat 23589208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 6708956 - 6708819
Alignment:
Q  63 aggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacg 162  Q
    ||||||| |||||||||| ||| | |||||||  || |||||| ||||  ||| ||||||||||||||| |||||||||||||||| ||||||| ||       
T  6708956 aggtgaaccatatttaaaggtggttcaccataaaccgtattaaattttctaattttaaccatttgatttattctttaaaaaaggaccgttgaattatgta 6708857  T
Q  163 gggtctattgtactttactgtgaaccactcacacctaa 200  Q
    |||||||||| ||||| |||||||||||| ||||||||    
T  6708856 gggtctattgcactttcctgtgaaccactaacacctaa 6708819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 3532313 - 3532414
Alignment:
Q  43 tttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaa 142  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||| |||    ||  || ||||||||||||||||||||||||||    
T  3532313 tttttaacattaaatgtttaaggtgaaccatatttaaaggtggtccaccatatgcattactaaaaaattttattttaaccatttgattttttctttaaaa 3532412  T
Q  143 aa 144  Q
    ||    
T  3532413 aa 3532414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 3528290 - 3528117
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    |||||| |||| ||||| |||| |||||||||||| |  ||| || ||||||||| |||||||||| ||| | |||||||  || |||||| ||||| ||    
T  3528290 cgttacttcttctggtcttctctattagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaa 3528191  T
Q  115 tattaaccatttgatttttt-ctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaac 187  Q
    | ||||||| |||||||||| |||||||| |||||  |||||| ||   |||| ||||||| ||||||||||||    
T  3528190 ttttaaccagttgattttttcctttaaaagaggaccattgaattatgtagggtgtattgtattttactgtgaac 3528117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 7983692 - 7983593
Alignment:
Q  43 tttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaa 142  Q
    |||||||||| |||||| ||||||||| ||| |||||| ||| |||||||||   |||||||| ||||| ||| | | || |||||||||||||||||||    
T  7983692 tttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcatccttttgattttttctttaaaa 7983593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 35799597 - 35799730
Alignment:
Q  9 ttcttccgtt-acctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaatt 107  Q
    |||||||||| |||||||| |||| ||||| |||| ||||||| |||||||| ||||||||||||  |||| ||||| || ||||||  | ||||||| |    
T  35799597 ttcttccgtttacctcttt-ggtcctctccgttagcttttaaccttaaatgtctaaggtgaatcaactttataagtggtctaccatagactttattaaat 35799695  T
Q  108 ttttgaatattaaccatttgattttttctttaaaa 142  Q
     ||  ||| |||||| |||||| |||| |||||||    
T  35799696 gttataattttaaccgtttgatcttttttttaaaa 35799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 11575502 - 11575421
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    |||||||| | ||| || ||||||||| |||||||| ||||||||||||  |||| | |||||||||||||  |||||||||    
T  11575502 ttttggtcctttccgtttgtttttaaccttaaatgtctaaggtgaatcaactttataggtgatccaccataaaccttattaa 11575421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 14716228 - 14716188
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  14716228 tcttcttctgttacctcttttggtcctctccattagttttt 14716188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 3665307 - 3665345
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttt 45  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  3665307 tcttctgccgttacctcttttgatcatctccattagttt 3665345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 7037066 - 7037184
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||| ||| ||  |||||||| |||||| | ||||||||||||  |||| | |||||||||| ||  ||||||||| | ||| | | ||||||     
T  7037066 ttttggtcatttccgtttatttttaaccttaaatatctaaggtgaatcaactttataggtgatccaccgtaaaccttattaaatctttcatttttaaccg 7037165  T
Q  124 tttgattttttctttaaaa 142  Q
    |||||| |||| |||||||    
T  7037166 tttgatcttttttttaaaa 7037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 8537103 - 8537152
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaag 64  Q
    ||||| || |||||||||||||| |||||||||||| |||||||| ||||    
T  8537103 cgttatctattttggtcatctccgttagtttttaaccttaaatgtctaag 8537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 14714901 - 14714937
Alignment:
Q  165 gtctattgtactttactgtgaaccactcacacctaat 201  Q
    |||||||||| |||||||||||||||| |||||||||    
T  14714901 gtctattgtattttactgtgaaccactaacacctaat 14714937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 13513503 - 13513693
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||||| |||||||||||||||| ||||| |||| ||||||||| |||||| |||| |||| |||||||||||||| |||||||||| ||||||||||    
T  13513503 tcttcttctgttacctcttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaat 13513602  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacc 197  Q
    ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  13513603 ttttttaattttaaccatttgattttttctttaaaataggaccgttgaatcatgtgaggtctattgtactttactgtgaaccactcacacc 13513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 13603036 - 13603226
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||||| |||||||||||||||| ||||| |||| ||||||||| |||||| |||| |||| |||||||||||||| |||||||||| ||||||||||    
T  13603036 tcttcttctgttacctcttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaat 13603135  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacc 197  Q
    ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  13603136 ttttttaattttaaccatttgattttttctttaaaataggaccgttgaatcatgtgaggtctattgtactttactgtgaaccactcacacc 13603226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 21670147 - 21670341
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||| |||||| ||||||| |||||||||||||||||||||    
T  21670147 tcttcttccgttacctcttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaat 21670246  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| ||| ||||||||||| |||||||||||||| ||||| ||||||||||  |||||||||| ||||||| |||||| || |||||||||||    
T  21670247 ttttttaattttaaccatttggttttttctttaaaagaggaccgttgaatcatgtggggtctattatactttagtgtgaatcattcacacctaat 21670341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 44103329 - 44103133
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||| |||||| ||||||||| ||| |||||| ||| |||||||||||||||||||||    
T  44103329 tcttcttccgtttcctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgccttattaat 44103230  T
Q  107 t-ttttgaatattaaccatttga-ttttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | |||| ||| |||||||||||| ||||||| |||||| | ||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  44103229 tttttttaattttaaccatttgatttttttcattaaaagaagaccgttgaatcatgtggggtctattgtactttattgtgaaccactcacacctaat 44103133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 10052194 - 10052381
Alignment:
Q  14 ccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttga 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| ||| |||||||||  ||||||||| ||||| |    
T  10052194 ccgttacctcttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccataaaccttattaaatttttaa 10052293  T
Q  114 atattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
     | |||||| ||||||||||||||||||| | || ||||| |||||   |||||||||||| ||||||||||||||||  ||||||||    
T  10052294 gttttaaccctttgattttttctttaaaagatgattgttggatcatgtagggtctattgtattttactgtgaaccactaccacctaat 10052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 21961906 - 21962090
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||| |||||| | ||||||| ||| |||||| ||| |||||||||||||||| |||     
T  21961906 tcttcttccgttatctcttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaa 21962005  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccact 191  Q
    ||||| ||| |||||||||||||||||||||||||| | |||  ||||||||    | |||||||||||||||||||||||||||    
T  21962006 ttttttaattttaaccatttgattttttctttaaaacaagaccattgaatcaagttgagtctattgtactttactgtgaaccact 21962090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 240
Target Start/End: Complemental strand, 15116856 - 15116713
Alignment:
Q  86 tccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtga 185  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||          ||| |||||| |||||||| ||||    
T  15116856 tccaccatatgtcttattaattttttgaacattaaccatttgattttttctctaaaagaggaccgt----------gggatctattatactttacggtga 15116767  T
Q  186 accactcacacctaatcatcttcaatgttctctcttcatcttctttatccctttg 240  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15116766 accactcacacctaatcatcttc-atgttctctcttcatcttctttatccctttg 15116713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 36756164 - 36756342
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||||| |||| | |||||||||||||||||||| ||| | ||||||| |||||||||| ||||| ||| ||||||     
T  36756164 ttttggtcatctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcaccataagccttattaaatttttaaattttaaccc 36756263  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtct-attgtactttactgtgaaccactcacacctaat 201  Q
    ||| ||||||||||||||| || |  |||| |||||   |||||| |||||| |||||||||||||||| |||||||||    
T  36756264 tttaattttttctttaaaagagaatcgttggatcatgtagggtctaattgtattttactgtgaaccactaacacctaat 36756342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 13363602 - 13363417
Alignment:
Q  16 gttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaat 115  Q
    |||||||||||||||| ||||| |||||||||||||  |||||| ||| ||||| |||||||||| ||| | ||||||   ||||| ||| ||||| |||    
T  13363602 gttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaat 13363503  T
Q  116 attaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
     |||||| ||| ||||||||||||||| |||| ||||| |||||   |||||||||||| |||  ||||||||||| |||||||||    
T  13363502 tttaaccttttaattttttctttaaaagaggattgttggatcatgtagggtctattgtatttttgtgtgaaccactaacacctaat 13363417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 39325865 - 39325672
Alignment:
Q  9 ttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattt 108  Q
    ||||||||||||||||||| ||||||||   ||||||||||||| |||||| |||||||||  || |||||| ||| || | ||||||||||| ||| ||    
T  39325865 ttcttccgttacctcttttagtcatctctgctagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaaatt 39325766  T
Q  109 tttgaatattaaccatttgatt-ttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||| ||| |||||||||||||| |||||||||||| |   | |||| |||||    |  ||||||||||||||||||||||| | |||||||||    
T  39325765 ttttaattttaaccatttgatttttttctttaaaagaatgcagttggatcatgtacgacctattgtactttactgtgaaccattaacacctaat 39325672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 7486177 - 7486354
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| |||||| ||| ||||| ||| |||||| ||  |||||||||  ||||||||| ||||| ||| ||| ||     
T  7486177 ttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatgtttaaatgttgtccaccatagaccttattaaatttttaaattttagcct 7486276  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||| |||| ||||  ||||||   | ||||||||| |||| ||| ||||||  |||||||||    
T  7486277 tttgattttttctttaaaagaggattgttagatcatataagatctattgtattttattgtaaaccaccaacacctaat 7486354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 39546693 - 39546516
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||| ||| |||||| ||| ||||||||   ||||| |||     | ||| ||||||     
T  39546693 ttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtccaccatggaccttagtaaaaaaattaattttaaccc 39546594  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||| ||||||| |||| ||||| |||||  ||| ||||||||| ||||| |||||||||  |||||||||    
T  39546593 tttgattttttttttaaaagaggattgttggatcatgtgggatctattgtattttaccgtgaaccacaaacacctaat 39546516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 117148 - 117313
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| |||||| |||||||| |||| |||||| ||| |||||||||  ||||| |||  |||| ||| ||| ||     
T  117148 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagaccttactaa-attttaaattttagcct 117246  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccac 190  Q
    ||||||||||||||| ||| |||| ||||| ||||||  || ||||||||| |||| ||| ||||||    
T  117247 tttgattttttctttgaaagaggattgttggatcatataggatctattgtattttattgtaaaccac 117313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 37276257 - 37276135
Alignment:
Q  26 ttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatt 125  Q
    |||||| ||||  |||||||||||||| ||| || ||||||||| |||||||||| ||| | ||| |||  || |||||| ||||| ||| |||||||||    
T  37276257 ttggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattttttaattttaaccatt 37276158  T
Q  126 tgattttttctttaaaaaaggac 148  Q
    ||||||||||||||||| |||||    
T  37276157 tgattttttctttaaaagaggac 37276135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 45194583 - 45194713
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    ||||| |||||||||||| |||||| | |||||||| ||| || || ||   |||||||| ||||||||||  ||||||||||||| ||||| |||||||    
T  45194583 ttttgatcatctccattaatttttagccttaaatgtctaaagtaaaacaacattaaaagtaatccaccataaaccttattaattttatgaattttaacca 45194682  T
Q  124 tttga--ttttttctttaaaaaaggactgtt 152  Q
    |||||  |||||| ||||||| |||||||||    
T  45194683 tttgattttttttttttaaaagaggactgtt 45194713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 21267233 - 21267368
Alignment:
Q  25 tttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccat 124  Q
    ||||||| ||||| |||||||||||||| |||| | ||||||| | |||  || || ||| |||||||||| ||| ||||| ||||| ||| |||||| |    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatatacctaattaaatttttaaattttaacctt 21267332  T
Q  125 ttga-ttttttctttaaaaaaggactgttgaatcat 159  Q
    |||| |||||||||||||| |||| ||||| |||||    
T  21267333 ttgatttttttctttaaaataggattgttggatcat 21267368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 35944008 - 35944078
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccata 94  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| ||  |||| | |||||||||||||    
T  35944008 ttttggtcatctccgttagtttttaactttaaatgtctaaggtgaaccaactttataggtgatccaccata 35944078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 13367084 - 13366985
Alignment:
Q  6 atcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    ||||||| |||||  || |||||||| ||||| |||||||||||| |||||||| ||||||||| ||  |||| | ||| |||||||||  |||||||||    
T  13367084 atcttctgccgtttactattttggtcctctccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 13366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 44606239 - 44606356
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    ||||| || |||||||||||||||||| |||||||| ||||||||| ||  |||| | ||| |||||||||  |||| |||| | ||| | | ||||||     
T  44606239 ttttgatcctctccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttgttaaatcttttatttttaaccg 44606338  T
Q  124 tttgattttttctttaaa 141  Q
    |||||| |||| ||||||    
T  44606339 tttgatcttttttttaaa 44606356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 13514898 - 13514858
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  13514898 tcttcttctgttacctcttttggtcatctccgttagttttt 13514858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 13604431 - 13604391
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  13604431 tcttcttctgttacctcttttggtcatctccgttagttttt 13604391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 37276101 - 37276065
Alignment:
Q  165 gtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||||||||||| |||||||||    
T  37276101 gtctattgtactttactgtgaaccactaacacctaat 37276065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 39323870 - 39323910
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  39323870 tcttcttccgttacctcttttggtcctctccgttagttttt 39323910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 8095446 - 8095556
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| | ||| |||||||||||  |||||||| ||||||||| ||  |||| | ||||| |||||||| ||||||||| | ||  |   |||||||    
T  8095446 ttttggtcctttccgttagtttttaatcttaaatgtctaaggtgaaccaactttataggtgatgcaccatataccttattaaatcttgtatctttaacca 8095545  T
Q  124 tttgatttttt 134  Q
    |||||||||||    
T  8095546 tttgatttttt 8095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 39220794 - 39220870
Alignment:
Q  39 ttagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaat 115  Q
    |||||||||||| |||||||| ||||||||| ||   ||||||||  || ||||||  ||||||||||||| |||||    
T  39220794 ttagtttttaaccttaaatgtctaaggtgaaacaatattaaaagtagtctaccatagaccttattaattttatgaat 39220870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 44102032 - 44102072
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  44102032 tcttcttccgttacctcttttggtcctctctgttagttttt 44102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 7483558 - 7483379
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||||||| |||||| |||||||  ||||||||||||||||||||    
T  7483558 tcttcttccgttacctcttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgccttattaat 7483459  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaa 186  Q
    ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||||||||||    
T  7483458 ttttttaattttaaccatttgattttttctttaaaagaggaccgttgaatcatgtggggtctattatactttactgtgaa 7483379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 17350135 - 17349941
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||| | |||||||||||||||| ||||| |||||||||||||| |||||| ||||||||| |||||||||| ||| |||||||||||||||| |||     
T  17350135 tcttctcctgttacctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaa 17350036  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||   |||||||||| |||||| ||||||||||| |||||||||    
T  17350035 ttttttaattttaaccatttgattttttctttaaaagaggaccgttgaatcatgtagggtctattgaactttattgtgaaccactaacacctaat 17349941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 39133108 - 39133294
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    ||||||||||||||||| ||||  |||||||||||||| |||||| ||||||||| |||||||||| ||| |||||||||||||||| ||| ||||| ||    
T  39133108 cgttacctcttttggtcctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaa 39133207  T
Q  115 tattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | |||||||||||||||||||||||||| ||||| ||||||||||    |||||||||||||||| ||||||||||| |||||||||    
T  39133208 ttttaaccatttgattttttctttaaaagaggacagttgaatcatgtaaggtctattgtactttattgtgaaccactaacacctaat 39133294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 53808418 - 53808595
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||| ||| |||||||||  ||||||||| ||||| ||| ||||||     
T  53808418 ttttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccaccataaaccttattaaatttttaaattttaaccc 53808517  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||| || |  |||| |||||   || ||||||||| |||||||||||||||| |||||||||    
T  53808518 tttgattttttctttaaaagagaatcgttggatcatgtaggatctattgtattttactgtgaaccactaacacctaat 53808595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 11219513 - 11219706
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||| |||||  || |||||||||||||| |||| ||||||||| |||  | ||||||||| |||||||||| ||| | |||||||   | ||||||     
T  11219513 tcttctgccgtttactattttggtcatctccgttagattttaacatcaaaattctaaggtgaaccatatttaaaggtggttcaccatagatcgtattaaa 11219612  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaa 200  Q
    ||||| ||| |||||||||||||||||||||||||| ||||| ||||||| ||   |||||||||||||||| |||||||||||| ||||||||    
T  11219613 ttttttaattttaaccatttgattttttctttaaaagaggaccgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaa 11219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 32979181 - 32979365
Alignment:
Q  17 ttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaata 116  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||  ||||||||| ||| | |||||||  || |||||| ||||| |||     
T  32979181 ttacctcttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaatt 32979280  T
Q  117 ttaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||  |||||||||| | ||||||||||| ||   |||| |||||||||||| ||| || |||| |||||||||    
T  32979281 ttaaccatttgattgattctttaaaagatgactgttgaattatgtagggtatattgtactttattgtaaatcactaacacctaat 32979365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 201
Target Start/End: Complemental strand, 34903013 - 34902833
Alignment:
Q  21 ctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaa 120  Q
    ||||||||||||||||| |||||||||||||  |||||| ||| ||||| |||||||||| ||| | ||||||   ||||| ||| ||||| ||| ||||    
T  34903013 ctcttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaattttaa 34902914  T
Q  121 ccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    || |||||||||||| |||||| |||| ||||| |||||   |||| ||||||  |||| ||||||||||| |||||||||    
T  34902913 ccttttgattttttcattaaaagaggattgttggatcatgtagggtttattgttttttagtgtgaaccactaacacctaat 34902833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 47765538 - 47765716
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||||| |||| | | ||||||| |||  |||||  || |||||||||  ||||||| | ||||| ||| ||||||     
T  47765538 ttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccatagaccttattgaatttttaaattttaacct 47765637  T
Q  124 tttga-ttttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| |||||||||||||| |||| ||||| |||||   |||||||||||| ||||  |||||||||| |||| ||||    
T  47765638 tttgatttttttctttaaaagaggattgttggatcatgtagggtctattgtattttagcgtgaaccactaacacttaat 47765716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 12062400 - 12062290
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||| ||  |||| | |||||||||||||| ||||||||| | ||  | | |||||||    
T  12062400 ttttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccaccatataccttattaaatcttgtatttttaacca 12062301  T
Q  124 tttgatttttt 134  Q
    |||||||||||    
T  12062300 tttgatttttt 12062290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 8371320 - 8371497
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| |||| | ||| | ||| | || ||| | ||| ||||||||   ||||| ||| ||||| ||| ||||||     
T  8371320 ttttggtcctctccgttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtccaccatggaccttagtaaattttttaattttaaccc 8371419  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||| |||| ||||| ||||||    |||||||||| | || ||| ||||||| |||||||||    
T  8371420 tttgattttttctttaaaagaggattgttggatcatatatagtctattgtattctattgtaaaccactaacacctaat 8371497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 31638201 - 31638352
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgttt--aaggtgaatcatatttaaaagtgatccaccatatgccttatta 104  Q
    |||||||  ||||||||||||| || |||||  ||||||||||||| |||| | |  |||||||| |||||||||| ||| || |||||| |||||| ||    
T  31638201 tcttcttatgttacctcttttgatcctctccgctagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccatacgccttacta 31638300  T
Q  105 attttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcat 159  Q
    | ||||| ||| |||    ||||||||||||||||||| | ||| ||||||||||    
T  31638301 aattttttaattttac---tttgattttttctttaaaagaagacagttgaatcat 31638352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 7483331 - 7483254
Alignment:
Q  101 attaattttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtacttta 179  Q
    ||||||||||| ||| ||| ||||||||||||||  |||||| ||||| ||||||||||  |||||||||| |||||||    
T  7483331 attaatttttt-aattttatccatttgatttttttgttaaaagaggaccgttgaatcatgtggggtctattatacttta 7483254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 19622106 - 19622172
Alignment:
Q  25 tttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccacc 91  Q
    ||||||| ||||| |||||||| ||||| ||||||||||||||||  || |||||| ||| ||||||    
T  19622106 tttggtcctctccgttagttttcaacatcaaatgtttaaggtgaactatgtttaaaggtggtccacc 19622172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 24495084 - 24494888
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||||| |||||||| ||||||| ||||| |||||||||||||| |||||| ||| ||||| |||||||||||||| |||||||||||||||||||||    
T  24495084 tcttcttctgttacctcgtttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaat 24494985  T
Q  107 tttttgaatattaaccatttgatttttt--ctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| ||| ||||||||||||||||||  |||||||| |  || ||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  24494984 ttttttaattttaaccatttgatttttttcctttaaaagataaccgttgaatcatgtggcgtctattgtactttactgtgaaccactcacacctaat 24494888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 14109087 - 14108952
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||| ||| ||||| |||||||||||||| |||||| ||||||||| ||| |||||| ||| |||||||||  |||||||||  |||| ||| ||||||     
T  14109087 ttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaacct 14108988  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcat 159  Q
    ||| ||||||||||||||| |||| ||||| |||||    
T  14108987 tttaattttttctttaaaagaggattgttggatcat 14108952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 14419044 - 14418909
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||| ||| ||||| |||||||||||||| |||||| ||||||||| ||| |||||| ||| |||||||||  |||||||||  |||| ||| ||||||     
T  14419044 ttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaacct 14418945  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcat 159  Q
    ||| ||||||||||||||| |||| ||||| |||||    
T  14418944 tttaattttttctttaaaagaggattgttggatcat 14418909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 35315191 - 35315077
Alignment:
Q  86 tccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtga 185  Q
    |||||||||||||||| ||| |||||  || |||||||||| ||||||||||||||| |  | |||||||||||   |||||| ||||||||||||||||    
T  35315191 tccaccatatgccttactaaatttttttattttaaccattttattttttctttaaaagataattgttgaatcatgtagggtcttttgtactttactgtga 35315092  T
Q  186 accactcacacctaa 200  Q
    || ||| ||||||||    
T  35315091 actactaacacctaa 35315077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 201
Target Start/End: Original strand, 4167570 - 4167728
Alignment:
Q  43 tttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaa 142  Q
    |||||||||| |||| | ||||||||| ||| |||||| ||| |||||||||   |||||||| ||||| ||| | |||| |||||||||||||||||||    
T  4167570 tttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcaaccttttgattttttctttaaaa 4167669  T
Q  143 aaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
     |||  ||||| || ||   |||||| ||||| |||| ||| ||||||  |||||||||    
T  4167670 gaggtttgttggatgatgtagggtctgttgtattttattgtaaaccaccgacacctaat 4167728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 132009 - 131898
Alignment:
Q  30 tcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgat 129  Q
    |||||||| |||||||||||| |||||||| ||||||||| ||  |||  |||||  | ||||||  | ||||||| ||||| ||| |||||| ||||||    
T  132009 tcatctccgttagtttttaaccttaaatgtctaaggtgaaccaactttgtaagtggactaccataaactttattaaattttttaattttaaccgtttgat 131910  T
Q  130 tttttctttaaa 141  Q
     |||||||||||    
T  131909 cttttctttaaa 131898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 25154952 - 25154882
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccata 94  Q
    |||||||||||||| || ||||||||| |||||||| ||||||||| ||  |||| ||||| |||||||||    
T  25154952 ttttggtcatctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataagtggtccaccata 25154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 26406225 - 26406270
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaa 69  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||||    
T  26406225 ttttggtcatctccgttattttttaaccttaaatgtctaaggtgaa 26406270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 2293558 - 2293363
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||| | |||| |||||| ||||| ||||||||||| || |||||| | | ||||||||||||||||  || ||||||||||||||||||||     
T  2293558 tcttcttccgtaatctctattggtcctctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgccttattaaa 2293459  T
Q  107 tttttgaatattaaccatttgattt-tttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| ||| ||||||||||||||| |||| |||||| ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  2293458 ttttttaattttaaccatttgatttatttcattaaaagaggaccgttgaatcatgtggggtctattgtactttactgtgaaccactcacacctaat 2293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 186
Target Start/End: Complemental strand, 36604874 - 36604694
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| || |||| | |||| |||| |||||| |||||||  ||||||||||||||||||||    
T  36604874 tcttcttccgttacctcttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgccttattaat 36604775  T
Q  107 t-ttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaa 186  Q
    | |||| ||| |||||||||||||||||||||||||| |||||  |||||||||  |||||||||| ||||||||||||||    
T  36604774 tttttttaattttaaccatttgattttttctttaaaagaggaccattgaatcatgtggggtctattatactttactgtgaa 36604694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 38419050 - 38418857
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||| |||||  || |||| ||||||||| |||||||||||||||||| ||||||| |||| |||||||| | ||| |||||||||||||||| |||     
T  38419050 tcttctgccgtttactgttttagtcatctccgttagtttttaacattaaacgtttaagatgaaccatatttataggtggtccaccatatgccttactaaa 38418951  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaa 200  Q
    |||||  || ||||||||||||||||||||||||||||   ||||| ||||||   ||||||||||||||||||| ||||||||| ||||||||    
T  38418950 tttttttattttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgtactttactatgaaccactaacacctaa 38418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 43894197 - 43894382
Alignment:
Q  16 gttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaat 115  Q
    |||||||||||||||||| ||| || ||||||||||| |||||| | ||||||| ||||||||||  || ||||| ||||||| |||||| ||||| |||    
T  43894197 gttacctcttttggtcatatccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccacaatatgccctattaaattttttaat 43894296  T
Q  116 attaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
     |||||||||||||||||||||||||| ||| |||||||||  |   ||||||||||||||||| ||| ||||||| ||| |||||    
T  43894297 cttaaccatttgattttttctttaaaagagggctgttgaattttgtagggtctattgtactttagtgtcaaccactaacatctaat 43894382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 29688003 - 29687817
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| || || ||| |||||||||| ||| |||||| ||  ||||||||| ||||| |     
T  29688003 cgttacctcttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtccaccgtaaaccttattaaatttttaag 29687904  T
Q  115 tattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | |||||||||||||||||||||||||| || | ||||| |||||    ||||||||||| |||| |||||||||||  ||||||||    
T  29687903 ttttaaccatttgattttttctttaaaagagaattgttggatcatgtaaggtctattgtattttattgtgaaccactaccacctaat 29687817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 44302813 - 44302952
Alignment:
Q  17 ttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaata 116  Q
    ||||||||||||||| ||||| |||||||||||||||||| |  |||||||||  ||||||||| ||| | |||||||  || |||||| ||||| |||     
T  44302813 ttacctcttttggtcctctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaatt 44302912  T
Q  117 ttaaccatttgattttttctttaaaaaaggactgttgaat 156  Q
    ||||||||||||||  |||||||||| | || ||||||||    
T  44302913 ttaaccatttgattgattctttaaaagatgattgttgaat 44302952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 11094626 - 11094801
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||| | |||||||||||||| |||||| ||||||  | ||| |||||| ||| | |||||||  ||||||||| ||||| ||||||||||     
T  11094626 ttttggtcctcttcgttagtttttaacatcaaatgtctaaggt--accatgtttaaatgtggttcaccatagaccttattaaatttttaaatattaacct 11094723  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | ||||||||||||||||| |||| ||||| |||||    ||||||||||| |||| ||| ||||||  |||||||||    
T  11094724 tgtgattttttctttaaaagaggattgttggatcatgtaaggtctattgtattttattgtaaaccaccaacacctaat 11094801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 35787896 - 35788073
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| |||||| |||||| |||||| |||||| ||| |||||||||  | ||||||| ||||| ||| ||||||     
T  35787896 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccaccatagactttattaaatttttaaattttaacct 35787995  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||| | |||||| |||||| | || ||||| ||||| | |||||||||| | |||| ||| || |||  |||||||||    
T  35787996 tttaaatttttcattaaaagatgattgttggatcatgcagggtctattgcattttattgtaaatcaccaacacctaat 35788073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 39592305 - 39592170
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||  ||||| ||| |||||||||| |||||| ||||||||  ||| |||||| ||| |||| ||||| ||||||||| ||||| ||| ||||||     
T  39592305 ttttggttctctccgttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtccatcatataccttattaaatttttaaattttaacct 39592206  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcat 159  Q
    ||||||||||||| ||||| |||| ||||| |||||    
T  39592205 tttgattttttctataaaagaggattgttggatcat 39592170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 6616227 - 6616074
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||||||||||||| ||||||  ||||||||  ||  |||||  |  ||||| |||  ||||||||| ||||| ||| ||||||     
T  6616227 ttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtccactatagaccttattaaatttttaaattttaacct 6616128  T
Q  124 tttgattt-tttctttaaaaaaggactgttgaatcatacggggtctattgtact 176  Q
    |||||||| ||||||||||| |||| ||||  ||||| | ||||||||||||||    
T  6616127 tttgatttatttctttaaaagaggattgttcgatcatgcagggtctattgtact 6616074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 36604646 - 36604588
Alignment:
Q  101 attaattttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcat 159  Q
    ||||||||||| ||| ||||||||||||||||||| |||||| ||||| ||||||||||    
T  36604646 attaatttttttaattttaaccatttgattttttcgttaaaagaggaccgttgaatcat 36604588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 52980143 - 52980261
Alignment:
Q  83 tgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactg 182  Q
    |||||| |||||| ||||||||| ||||| ||| |||||| ||| ||||||||||||||| |||| ||||| || ||   | |||||||||| |||| ||    
T  52980143 tgatcctccatataccttattaaatttttaaattttaaccttttaattttttctttaaaagaggattgttggattatgtagagtctattgtattttattg 52980242  T
Q  183 tgaaccactcacacctaat 201  Q
    | ||||||  |||||||||    
T  52980243 taaaccaccaacacctaat 52980261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 17494229 - 17494329
Alignment:
Q  26 ttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatt 125  Q
    ||||| |||||| ||| |||||||| |||||||| ||| ||||| ||   ||||||||  |||||||||  ||||||||||||| ||||| |||||||||    
T  17494229 ttggttatctccgttactttttaaccttaaatgtctaacgtgaaacaacgttaaaagtagtccaccatagaccttattaattttatgaattttaaccatt 17494328  T
Q  126 t 126  Q
    |    
T  17494329 t 17494329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 86903 - 86970
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccacc 91  Q
    |||||||| ||||| |||||||||||||| |||||| ||||||||| ||| |||||| ||| ||||||    
T  86903 ttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccacc 86970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 26393125 - 26393024
Alignment:
Q  42 gtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaa 141  Q
    |||||||||| ||||||| ||||||||| ||   ||| | ||| |||||||||  ||||| ||| ||||| ||| ||||||||||||| ||||  |||||    
T  26393125 gtttttaacactaaatgtctaaggtgaaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatattttagttaaa 26393026  T
Q  142 aa 143  Q
    ||    
T  26393025 aa 26393024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 28102176 - 28102257
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    |||||||||| ||| ||  |||||||| |||||||| ||||||||||||  |||| | |||||||||| ||  |||||||||    
T  28102176 ttttggtcatttccgtttatttttaaccttaaatgtctaaggtgaatcaactttataggtgatccaccgtaaaccttattaa 28102257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 47668538 - 47668453
Alignment:
Q  107 tttttgaatattaaccatttgatttttt-ctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccact 191  Q
    ||||| ||| |||||| ||||||||||| |||||||| |||| ||||  |||||   |||||||||||| |||| |||||||||||    
T  47668538 tttttaaattttaaccttttgatttttttctttaaaagaggattgttcgatcatgtagggtctattgtattttagtgtgaaccact 47668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 306666 - 306710
Alignment:
Q  13 tccgttacctcttttggtcatctccattagtttttaacattaaat 57  Q
    |||||||||  ||||||||||||| ||||||||||||| ||||||    
T  306666 tccgttacccattttggtcatctcgattagtttttaactttaaat 306710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 51218999 - 51218804
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||| |||  |||||| ||||| |||||||||||||| |||||| ||| ||||| ||||||||||  || ||||||||||||||||||||     
T  51218999 tcttcttccgttaactcaattggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgccttattaaa 51218900  T
Q  107 tttttgaatattaaccatttgattt-tttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||| ||| |||| |||||||||| |||| |||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  51218899 ttttttaattttaatcatttgatttatttcattaaaagaggactgttgaatcatgtggggtctattgtactttcctgtgaaccactcacacctaat 51218804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 50678453 - 50678639
Alignment:
Q  14 ccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttga 113  Q
    |||||||||||||||||| ||||  |||||||||||||| |||  | ||||||||| |||||||||| ||| | |||||||  || |||||| ||||| |    
T  50678453 ccgttacctcttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttt-a 50678551  T
Q  114 atattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    || |||||||||||||||||||||||||| ||||||||||||| | |  ||||||||||||||||||||||||| ||| |||||||||    
T  50678552 attttaaccatttgattttttctttaaaagaggactgttgaattacatagggtctattgtactttactgtgaacgactaacacctaat 50678639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 14764329 - 14764505
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||| | |||||||| ||| ||||||||| ||| || ||| |||||  || |||||||    
T  14764329 ttttagtcatctctgttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccaccatacgccatactaaatttttttattttaacca 14764428  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaa 200  Q
    |||||||||||||||||||||    |||| ||||||   |||||||||| |||||||||||||||||| ||||||||    
T  14764429 tttgattttttctttaaaaaatagttgttaaatcatgtagggtctattgcactttactgtgaaccactaacacctaa 14764505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 30551614 - 30551428
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||| ||| ||||| |||||| ||| ||| | ||||||   ||||| ||| ||||| ||    
T  30551614 cgttacctcttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgcaccatggaccttagtaaattttttaa 30551515  T
Q  115 tattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | |||||| ||||||||||||||||||| |||| ||||| |||||   |||||||||||| |||| ||||||||||| |||||||||    
T  30551514 ttttaaccttttgattttttctttaaaagaggattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaat 30551428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 26056163 - 26055987
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||| ||||| |||| ||||||||| ||| || ||| ||||| |||||||||| ||| | ||||||| ||| |||||| ||||| ||| |||||||    
T  26056163 ttttggtcctctccgttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggttcaccataggccgtattaaattttttaattttaacca 26056064  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaa 200  Q
    |||||||| |||||||||| ||||| ||||||| ||   |||||||||||||||| |||||||||||| ||||||||    
T  26056063 tttgatttattctttaaaagaggaccgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaa 26055987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 37624595 - 37624409
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    |||||| |||||||||| ||||| |||||||||||||| |||||| ||| ||||| |||||| ||| ||  | ||||||   ||||| ||| ||||| ||    
T  37624595 cgttacatcttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggttgtgcaccatggaccttagtaaattttttaa 37624496  T
Q  115 tattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | |||||| ||||||||||||||||||| |||| |||||||||||   |||||||||||| |||| ||||||||||| |||||||||    
T  37624495 ttttaaccttttgattttttctttaaaagaggattgttgaatcatgtagggtctattgtattttagtgtgaaccactaacacctaat 37624409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 201
Target Start/End: Complemental strand, 52742989 - 52742815
Alignment:
Q  27 tggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccattt 126  Q
    ||||| ||||| |||||||||||||| |||||||||||||||| ||| |||||| ||| | |||||||  ||| ||||  ||||| ||| |||||| |||    
T  52742989 tggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggtacaccatagacctaattacatttttaaattttaacctttt 52742890  T
Q  127 gattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    |||||||||||||||| || | ||||| |||| |  || ||||||||| |||||||| ||||||| |||||||||    
T  52742889 gattttttctttaaaagagaattgttggatcacaaaggatctattgtattttactgtaaaccactgacacctaat 52742815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 27689374 - 27689564
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttg-- 112  Q
    ||||||||||||||||| ||||| |||||||||||||  |||||| ||| ||||| |||||||||| ||| |||| |||   |||||||||||||||       
T  27689374 cgttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtccatcatggaccttattaattttttttt 27689473  T
Q  113 --aatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
      ||| |||||| ||||||||||||||||||| |  | ||||| |||||   |||||||||||| |||| ||||||||||| |||||||||    
T  27689474 ttaattttaaccttttgattttttctttaaaagataattgttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaat 27689564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 44977304 - 44977408
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    |||||| |||||||||| ||||||||||||  |||||||||||||| |||||| ||||||||| |||||||||| ||| |||||| ||  |||||||||     
T  44977304 tcttctgccgttacctcatttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccgtaaaccttattaaa 44977403  T
Q  107 ttttt 111  Q
    |||||    
T  44977404 ttttt 44977408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 9633875 - 9633990
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    ||||| || ||||| |||||||||||||| |||||| ||||||||| ||| |||||| ||| |||||||||  ||||||||| ||||| ||| || |||     
T  9633875 ttttgatcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaatttttaaattttgaccc 9633974  T
Q  124 tttgattttttcttta 139  Q
    ||||||||||||||||    
T  9633975 tttgattttttcttta 9633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 23082151 - 23081965
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    |||| |||||||||||| | ||| |||||||||||||  |||| | ||| ||||| |||||||||| ||| ||||||||   ||||| ||| ||||| ||    
T  23082151 cgttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttaataaattttttaa 23082052  T
Q  115 tattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    | |||||  ||||||||||| |||||||  ||| ||||| || ||    ||||||||||| |||| ||| ||||||| |||||||||    
T  23082051 ttttaacattttgattttttttttaaaagtggattgttggataatgtaaggtctattgtattttagtgtaaaccactaacacctaat 23081965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 49141512 - 49141429
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaatt 107  Q
    |||| ||||||||| |||||||||||||| |||||| ||||||||| ||||||||||  || |||||||||  |||||| ||||    
T  49141512 ttttagtcatctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccaccatagaccttataaatt 49141429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 22766845 - 22766717
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaa 114  Q
    |||| |||||||||||| | ||| |||||||||||||  |||| | ||| ||||| |||||||||| ||| ||||||||   ||||  ||| ||||| ||    
T  22766845 cgttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttcataaattttttaa 22766746  T
Q  115 tattaaccatttgattttttctttaaaaa 143  Q
    | |||||| ||||||||||| ||| ||||    
T  22766745 ttttaaccttttgatttttttttttaaaa 22766717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 51300221 - 51300168
Alignment:
Q  76 ttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgat 129  Q
    ||||||||| |||||||||  ||||||||||||| ||||| |||||||||||||    
T  51300221 ttaaaagtggtccaccatagaccttattaattttatgaattttaaccatttgat 51300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 21277076 - 21277175
Alignment:
Q  6 atcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    ||||||| |||||  || ||||| || ||||||||||||||| || |||||||| ||||||||| ||  |||| | ||| |||||||||  |||||||||    
T  21277076 atcttctgccgtttactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 21277175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 25889525 - 25889487
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttt 45  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  25889525 tcttcttccgttacctcttttggtcctctccgttagttt 25889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 48935143 - 48935105
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttt 45  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  48935143 tcttctgccgttacctcttttggtcatctccgttagttt 48935105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 51217701 - 51217741
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    |||||||||||||||||| |||||| ||||| |||||||||    
T  51217701 tcttcttccgttacctctcttggtcctctccgttagttttt 51217741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 207831 - 207647
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||| |||||| | ||||||| ||| |||||| ||| |||||||||||||||| |||     
T  207831 tcttcttccgttatctcttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaa 207732  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccact 191  Q
    ||||| ||| |||||||||||||||||||||||||| | |||  ||||||||    | |||||||||||||||||||||||||||    
T  207731 ttttttaattttaaccatttgattttttctttaaaacaagaccattgaatcaagttgagtctattgtactttactgtgaaccact 207647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 13237 - 13043
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaat 106  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| |||||| ||||||||| ||||||||||  || |||||||||| || || |||     
T  13237 tcttcttccgttacctcttttggtcctatccattaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaaa 13138  T
Q  107 tttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
     |||| ||| |||||||||||||||||||||||||| |||||||||||||  |   ||||||||||||||||| ||| ||||||| ||| |||||    
T  13137 atttttaatcttaaccatttgattttttctttaaaagaggactgttgaattttgtagggtctattgtactttattgtcaaccactaacatctaat 13043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 201
Target Start/End: Original strand, 21387719 - 21387914
Alignment:
Q  6 atcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    ||||||| |||||||||||||||||| | ||  |||||||||||||| |||  | ||||||||| |||||||||| ||| | ||||||| ||| ||||||    
T  21387719 atcttctgccgttacctcttttggtcctgtctgttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggttcaccataggccgtattaa 21387818  T
Q  106 ttttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
     ||||| ||| |||||||||||||||||||||||||| ||||| ||||||| ||   ||||||||||||||||||||| ||| ||| |||||||||    
T  21387819 attttttaattttaaccatttgattttttctttaaaagaggaccgttgaattatgtagggtctattgtactttactgtaaacgactaacacctaat 21387914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 7426760 - 7426859
Alignment:
Q  43 tttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttctttaaaa 142  Q
    |||||||||| |||||| |||||||||||||||||||| ||| |||||||||  ||||||||| ||||| ||| | |||| |||||||||||||||||||    
T  7426760 tttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccatagaccttattaaatttttaaatttcaaccttttgattttttctttaaaa 7426859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 184
Target Start/End: Original strand, 18693780 - 18693957
Alignment:
Q  6 atcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    |||||||  ||||||||||||||||| ||||  |||||||||||||| |||  | ||||||||| ||||| |||| ||| | |||||||  || ||||||    
T  18693780 atcttctgtcgttacctcttttggtcctctctgttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggttcaccatagaccgtattaa 18693879  T
Q  106 ttttttgaatattaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtg 184  Q
     ||||| ||| |||| ||||||| ||||||||||||| ||||| ||||||| ||     ||||||||||||||||||||    
T  18693880 attttttaattttaatcatttga-tttttctttaaaagaggaccgttgaattatgtatagtctattgtactttactgtg 18693957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 40058118 - 40058236
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||  |||||||| ||||||||| ||  |||| ||||  |||||||||  ||||||||| | ||| | | |||||      
T  40058118 ttttggtcatctccgttagtttttaatcttaaatgtctaaggtgaaccaactttataagtagtccaccatagaccttattaaatcttttatttttaactg 40058217  T
Q  124 tttgattttttctttaaaa 142  Q
    |||||| |||| |||||||    
T  40058218 tttgatcttttttttaaaa 40058236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 5383042 - 5383123
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaa 105  Q
    ||||| || ||||| |||||||||||| |||||||| ||||||||||||  |||| | ||| |||||||||  |||||||||    
T  5383042 ttttgatcctctccgttagtttttaaccttaaatgtctaaggtgaatcaactttataggtggtccaccatagaccttattaa 5383123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 2167516 - 2167421
Alignment:
Q  39 ttagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgatttttt 134  Q
    |||||||||||| |||||||| ||||||||| ||  |||| |  || |||||||||  ||||||||| | ||| | |||||||| |||||||||||    
T  2167516 ttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccaccatagaccttattaaatcttttattattaaccgtttgatttttt 2167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 39924 - 39740
Alignment:
Q  17 ttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaata 116  Q
    ||||||||||||||| ||||  |||||||||||||| ||| || |||||||||||||||||||| ||| | ||||||   || |||||| ||||| |||     
T  39924 ttacctcttttggtcctctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggttcaccatggaccgtattaaattttttaatt 39825  T
Q  117 ttaaccatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    |||||||||||||||||||||||||| | |||  |||||| ||   ||||||||||||||||||||||||||||| ||| |||||    
T  39824 ttaaccatttgattttttctttaaaagatgaccattgaattatgtagggtctattgtactttactgtgaaccactaacatctaat 39740  T

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Target: scaffold0098 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 200
Target Start/End: Original strand, 41023 - 41184
Alignment:
Q  39 ttagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatttgattttttcttt 138  Q
    |||||||||||||| |||||| ||||||||| |||||||||| ||| |||||||||||||||| ||| |||||  || |||||||||||||||||| |||    
T  41023 ttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaatttttttattttaaccatttgatttttttttt 41122  T
Q  139 aaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaa 200  Q
    |||| |  || ||||||||||   || | |||||||||||||||||||||||| ||||||||    
T  41123 aaaagataaccgttgaatcatgtaggatttattgtactttactgtgaaccactaacacctaa 41184  T

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Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 18139503 - 18139337
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacc- 122  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||| ||| ||||||  ||||||||||||  | ||||||| ||||| ||| ||||||     
T  18139503 ttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccatagacattattaaatttttaaattttaacct 18139404  T
Q  123 atttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaacca 189  Q
     ||||||||||||||||||| |||| ||||| |||||   |||||||||||| ||||||||||||||    
T  18139403 ttttgattttttctttaaaagaggattgttggatcatgtagggtctattgtattttactgtgaacca 18139337  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 34084154 - 34084073
Alignment:
Q  120 accatttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||||||  ||||| ||||||| ||   ||||||||||||||||||||||||||||| |||||||||    
T  34084154 accatttgattttttctttaaatgaggaccgttgaattatgtagggtctattgtactttactgtgaaccactaacacctaat 34084073  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 13507196 - 13507121
Alignment:
Q  15 cgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccac 90  Q
    ||||| ||||| | ||||||||  |||||||||||||| |||||||||||||||| |||||||||| ||| |||||    
T  13507196 cgttatctcttctagtcatctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtccac 13507121  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 33802031 - 33801884
Alignment:
Q  26 ttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccatt 125  Q
    |||||| ||||| |||||||||||||| |||| | ||||||  | |||  || || ||| |||||||||| ||||||||| ||||| ||| |||||  ||    
T  33802031 ttggtcctctccgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccaccatataccttattaaatttttaaattttaact-tt 33801933  T
Q  126 tgatttttt-ctttaaaaaaggactgttgaatcatacggggtctattgt 173  Q
    ||||||||| |||||||| |||| ||||| |||||   |||||||||||    
T  33801932 tgatttttttctttaaaagaggattgttggatcatgtagggtctattgt 33801884  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 27440209 - 27440145
Alignment:
Q  6 atcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaat 70  Q
    |||||||||||||  || |||||||| ||||| ||| |||||||| |||||||| ||||||||||    
T  27440209 atcttcttccgtttactattttggtcctctccgttaatttttaactttaaatgtctaaggtgaat 27440145  T

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Target: scaffold1974 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 644 - 467
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||  || | |||| ||   |||||||| ||||  ||| |||||||    
T  644 ttttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 545  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||  || || ||||||| ||   ||||||||| |||||||||||||| || | |||||||||    
T  544 tttgattttttctttaaatgagaaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaat 467  T

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Target: scaffold1878 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 630 - 807
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||  || | |||| ||   |||||||| ||||  ||| |||||||    
T  630 ttttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 729  T
Q  124 tttgattttttctttaaaaaaggactgttgaatcatacggggtctattgtactttactgtgaaccactcacacctaat 201  Q
    ||||||||||||||||||  || || ||||||| ||   ||||||||| |||||||||||||| || | |||||||||    
T  730 tttgattttttctttaaatgagaaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaat 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 9494 - 9379
Alignment:
Q  24 ttttggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaacca 123  Q
    |||||||||||||| |||||||||||||| |||  | ||||||||| ||||||||||  || | |||| ||   |||||||| ||||  ||| |||||||    
T  9494 ttttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaacca 9395  T
Q  124 tttgattttttcttta 139  Q
    ||||||||||||||||    
T  9394 tttgattttttcttta 9379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 47152 - 47216
Alignment:
Q  6 atcttcttccgttacctcttttggtcatctccattagtttttaacattaaatgtttaaggtgaat 70  Q
    |||||||||||||  || |||||||| ||||| ||| |||||||| |||||||| ||||||||||    
T  47152 atcttcttccgtttactattttggtcctctccgttaatttttaactttaaatgtctaaggtgaat 47216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 1314 - 1419
Alignment:
Q  27 tggtcatctccattagtttttaacattaaatgtttaaggtgaatcatatttaaaagtgatccaccatatgccttattaattttttgaatattaaccattt 126  Q
    ||||| ||||| ||| |||||||| |||||||||||||||||| ||  |||| ||| |||| ||||||  | ||||||||||||| ||| |||||| |||    
T  1314 tggtcctctccgttattttttaaccttaaatgtttaaggtgaaccaactttataag-gatctaccatagactttattaatttttt-aattttaaccgttt 1411  T
Q  127 gatttttt 134  Q
    ||| ||||    
T  1412 gatctttt 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 24848 - 24808
Alignment:
Q  7 tcttcttccgttacctcttttggtcatctccattagttttt 47  Q
    ||||| |||||||||| |||||||||||||| |||||||||    
T  24848 tcttcctccgttacctattttggtcatctccgttagttttt 24808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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