View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16594_low_4 (Length: 403)
Name: NF16594_low_4
Description: NF16594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16594_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 7 - 392
Target Start/End: Original strand, 7406304 - 7406687
Alignment:
| Q |
7 |
gaaagagcctgggagaataacagtccttattcagttacgactttgaatcaggtaagaaatgagtccttaatatttaattcggaagtgtttgggaacattc |
106 |
Q |
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| T |
7406304 |
gaaagagcctgggagaataacagtccttattcagttacgactttgaatcaggtaagaaatgagtccttaatatttaattcggaagtgtttgggaacattc |
7406403 |
T |
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| Q |
107 |
aaaagaggaagattattcttgagaaaagaatcaaaggaattcaattatctcttgagatggttgattctgccagattagtgtaccttaagcaggaacttca |
206 |
Q |
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| T |
7406404 |
aaaagaggaagattattcttgagaaaagaatcaaaggaattcaattatctcttgagatggtttattctgccagattagtgtaccttaagcaggaacttca |
7406503 |
T |
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| Q |
207 |
acaagaatatgatagagtacttttccaagaggaactccattggcaccaatggtctaaggaaaaatggatcaagtgtgaggattaaaataccaagtatttt |
306 |
Q |
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| T |
7406504 |
acaagaatatgatagagtacttttccaagaggaactccattggtaccaatggtctaaggaaaaatggatcaagtgtgaggattaaaataccaagtatttt |
7406603 |
T |
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| Q |
307 |
cacgctcagacggttatttgaagaaaaaacgtaatagaatccatgtgcttcaccttgctaacgacatatggtgtacgaatgatgat |
392 |
Q |
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| T |
7406604 |
cacgctcagacggttatttgaag--aaaacgtaatagaatccatgtgcttcaccttgctaacgacatatggtgtacgaatgatgat |
7406687 |
T |
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