View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16595_high_2 (Length: 536)

Name: NF16595_high_2
Description: NF16595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16595_high_2
NF16595_high_2
[»] chr6 (15 HSPs)
chr6 (81-292)||(17951955-17952166)
chr6 (81-285)||(35175783-35175987)
chr6 (340-535)||(17951712-17951907)
chr6 (340-535)||(34344065-34344260)
chr6 (342-535)||(35175534-35175726)
chr6 (85-250)||(34343847-34344004)
chr6 (81-205)||(34345291-34345415)
chr6 (81-186)||(17950561-17950666)
chr6 (123-172)||(24662522-24662571)
chr6 (82-205)||(4289419-4289542)
chr6 (123-218)||(13613569-13613664)
chr6 (79-170)||(4641353-4641444)
chr6 (96-186)||(3018451-3018541)
chr6 (222-283)||(10568561-10568622)
chr6 (78-186)||(29077325-29077433)
[»] chr4 (41 HSPs)
chr4 (81-292)||(5484540-5484751)
chr4 (80-292)||(43779780-43779992)
chr4 (81-292)||(39921494-39921705)
chr4 (340-534)||(32652358-32652552)
chr4 (84-292)||(32652102-32652310)
chr4 (81-292)||(39083639-39083850)
chr4 (86-285)||(39189387-39189586)
chr4 (340-535)||(43779537-43779732)
chr4 (340-533)||(44993959-44994152)
chr4 (340-535)||(39083898-39084093)
chr4 (340-535)||(39921753-39921948)
chr4 (340-535)||(42880431-42880626)
chr4 (340-535)||(5484799-5484994)
chr4 (90-292)||(44994200-44994402)
chr4 (75-292)||(42880674-42880885)
chr4 (340-429)||(39189641-39189730)
chr4 (81-186)||(5486038-5486143)
chr4 (89-204)||(6999268-6999383)
chr4 (121-243)||(13450943-13451064)
chr4 (124-205)||(15450383-15450464)
chr4 (120-204)||(25995080-25995164)
chr4 (82-205)||(32653598-32653721)
chr4 (81-186)||(39922993-39923098)
chr4 (123-204)||(13450272-13450353)
chr4 (81-186)||(44558512-44558617)
chr4 (219-283)||(11255841-11255905)
chr4 (79-170)||(47941809-47941900)
chr4 (89-186)||(42879283-42879380)
chr4 (89-186)||(44992816-44992913)
chr4 (222-283)||(51012087-51012148)
chr4 (81-204)||(35996063-35996186)
chr4 (219-281)||(4519535-4519597)
chr4 (80-194)||(35997745-35997859)
chr4 (81-154)||(2350558-2350631)
chr4 (89-186)||(2828397-2828494)
chr4 (81-186)||(10372725-10372830)
chr4 (89-186)||(39085138-39085235)
chr4 (89-194)||(44792942-44793047)
chr4 (222-278)||(2827566-2827622)
chr4 (222-278)||(35996225-35996281)
chr4 (222-278)||(51041837-51041893)
[»] chr7 (46 HSPs)
chr7 (80-292)||(4322485-4322697)
chr7 (81-292)||(45463670-45463881)
chr7 (340-534)||(45463929-45464123)
chr7 (80-292)||(48303562-48303774)
chr7 (340-535)||(34691254-34691449)
chr7 (340-520)||(48303334-48303514)
chr7 (81-292)||(34690995-34691206)
chr7 (340-535)||(4322248-4322437)
chr7 (86-163)||(30109708-30109785)
chr7 (96-204)||(34785080-34785188)
chr7 (123-205)||(34692715-34692797)
chr7 (23-79)||(21026961-21027017)
chr7 (121-205)||(48302191-48302275)
chr7 (80-186)||(30108564-30108670)
chr7 (89-186)||(46810713-46810810)
chr7 (27-79)||(28172241-28172293)
chr7 (144-215)||(29996504-29996575)
chr7 (222-281)||(38613625-38613684)
chr7 (81-204)||(46996703-46996826)
chr7 (81-172)||(47341719-47341810)
chr7 (146-204)||(11682846-11682904)
chr7 (78-172)||(38613514-38613608)
chr7 (120-173)||(48704248-48704302)
chr7 (89-134)||(23955323-23955368)
chr7 (89-186)||(36762666-36762763)
chr7 (42-79)||(40346071-40346108)
chr7 (79-170)||(8423316-8423407)
chr7 (144-215)||(20478105-20478176)
chr7 (222-281)||(23953967-23954026)
chr7 (89-204)||(33038798-33038913)
chr7 (219-278)||(47341588-47341647)
chr7 (144-217)||(56393-56466)
chr7 (222-283)||(1546449-1546510)
chr7 (89-186)||(4321046-4321143)
chr7 (89-194)||(8421424-8421529)
chr7 (89-194)||(35342433-35342538)
chr7 (81-170)||(35344325-35344414)
chr7 (89-186)||(45465170-45465267)
chr7 (222-283)||(46439431-46439492)
chr7 (89-186)||(46994668-46994765)
chr7 (178-218)||(1546384-1546424)
chr7 (230-282)||(2492496-2492548)
chr7 (89-217)||(27955378-27955506)
chr7 (219-283)||(30940326-30940390)
chr7 (223-279)||(35693275-35693331)
chr7 (222-278)||(40784508-40784564)
[»] chr2 (29 HSPs)
chr2 (80-292)||(28246662-28246874)
chr2 (86-292)||(11022926-11023131)
chr2 (340-535)||(11022683-11022878)
chr2 (76-285)||(38148490-38148700)
chr2 (340-532)||(38148755-38148947)
chr2 (340-534)||(28246922-28247116)
chr2 (89-283)||(11315258-11315451)
chr2 (86-170)||(39561-39645)
chr2 (15-79)||(19271302-19271366)
chr2 (117-201)||(38149986-38150069)
chr2 (91-218)||(39664755-39664882)
chr2 (89-186)||(28248161-28248258)
chr2 (146-218)||(17946159-17946231)
chr2 (1-44)||(31638791-31638834)
chr2 (144-218)||(7744106-7744180)
chr2 (89-170)||(41144-41225)
chr2 (89-186)||(11021541-11021638)
chr2 (81-186)||(37417273-37417378)
chr2 (86-186)||(25619665-25619765)
chr2 (145-215)||(37020572-37020642)
chr2 (222-279)||(6797669-6797726)
chr2 (222-283)||(10716804-10716865)
chr2 (222-283)||(14389005-14389066)
chr2 (81-170)||(15372499-15372588)
chr2 (222-283)||(17946256-17946317)
chr2 (219-272)||(37417432-37417485)
chr2 (81-170)||(41706539-41706628)
chr2 (219-283)||(40560382-40560446)
chr2 (219-283)||(42519126-42519190)
[»] chr1 (31 HSPs)
chr1 (80-292)||(5783363-5783575)
chr1 (340-524)||(5783623-5783807)
chr1 (91-218)||(34778125-34778252)
chr1 (81-204)||(42134482-42134605)
chr1 (144-215)||(46583546-46583617)
chr1 (145-217)||(33602632-33602704)
chr1 (96-172)||(34041828-34041904)
chr1 (23-79)||(38586157-38586213)
chr1 (219-278)||(42134641-42134700)
chr1 (80-186)||(18183962-18184068)
chr1 (222-283)||(2869741-2869802)
chr1 (222-283)||(26225455-26225516)
chr1 (222-283)||(34778040-34778101)
chr1 (91-215)||(4855956-4856080)
chr1 (219-283)||(15104600-15104664)
chr1 (222-282)||(18183846-18183906)
chr1 (219-283)||(27087441-27087505)
chr1 (144-215)||(9121658-9121729)
chr1 (219-278)||(45380890-45380949)
chr1 (80-186)||(5784853-5784959)
chr1 (3-76)||(26765376-26765450)
chr1 (80-154)||(27940607-27940681)
chr1 (80-186)||(33679258-33679364)
chr1 (222-283)||(4855868-4855929)
chr1 (89-186)||(11152553-11152650)
chr1 (89-194)||(27952478-27952583)
chr1 (89-186)||(31803686-31803783)
chr1 (81-154)||(33685299-33685372)
chr1 (223-283)||(3013371-3013431)
chr1 (222-278)||(46638713-46638769)
chr1 (146-218)||(51121970-51122042)
[»] chr8 (24 HSPs)
chr8 (80-292)||(40020548-40020760)
chr8 (340-533)||(28433387-28433580)
chr8 (340-535)||(40020305-40020500)
chr8 (87-292)||(28433629-28433834)
chr8 (81-205)||(23811532-23811656)
chr8 (81-186)||(32822361-32822466)
chr8 (91-213)||(27691164-27691286)
chr8 (89-205)||(9184391-9184507)
chr8 (219-283)||(13108258-13108322)
chr8 (219-283)||(38547386-38547450)
chr8 (79-170)||(31201178-31201269)
chr8 (81-204)||(42897775-42897898)
chr8 (222-283)||(5036611-5036672)
chr8 (219-283)||(8609709-8609773)
chr8 (104-204)||(11031452-11031552)
chr8 (153-205)||(28432293-28432345)
chr8 (219-278)||(42897680-42897739)
chr8 (120-218)||(8609794-8609892)
chr8 (224-278)||(8654663-8654717)
chr8 (144-218)||(13108343-13108417)
chr8 (144-218)||(38547291-38547365)
chr8 (233-283)||(42941947-42941997)
chr8 (89-186)||(31823462-31823559)
chr8 (89-186)||(40019164-40019261)
[»] chr3 (32 HSPs)
chr3 (81-292)||(41944576-41944785)
chr3 (340-535)||(41944833-41945028)
chr3 (120-204)||(30501156-30501240)
chr3 (89-201)||(40963369-40963481)
chr3 (81-205)||(41946066-41946190)
chr3 (144-215)||(44794270-44794341)
chr3 (144-215)||(3152228-3152299)
chr3 (78-173)||(48635372-48635467)
chr3 (76-186)||(23774147-23774257)
chr3 (219-281)||(31887355-31887417)
chr3 (219-283)||(2226074-2226138)
chr3 (81-217)||(40508899-40509035)
chr3 (144-215)||(2660275-2660346)
chr3 (81-204)||(48633877-48634000)
chr3 (222-283)||(7884795-7884856)
chr3 (221-278)||(23888678-23888735)
chr3 (89-186)||(45897058-45897155)
chr3 (79-172)||(51454283-51454376)
chr3 (222-283)||(53190681-53190742)
chr3 (219-283)||(30599839-30599903)
chr3 (230-282)||(33113083-33113135)
chr3 (81-204)||(31887453-31887576)
chr3 (91-218)||(53190766-53190893)
chr3 (225-283)||(35905634-35905692)
chr3 (225-283)||(54898601-54898659)
chr3 (222-283)||(17515472-17515533)
chr3 (222-283)||(23293091-23293152)
chr3 (89-186)||(23887206-23887303)
chr3 (89-186)||(33111849-33111946)
chr3 (81-186)||(33113199-33113304)
chr3 (222-283)||(41977911-41977972)
chr3 (230-278)||(48634051-48634099)
[»] chr5 (27 HSPs)
chr5 (340-532)||(42620436-42620628)
chr5 (81-292)||(42620676-42620887)
chr5 (89-205)||(1344781-1344897)
chr5 (81-186)||(38596868-38596973)
chr5 (89-186)||(32089911-32090008)
chr5 (79-172)||(43318093-43318186)
chr5 (219-283)||(17574476-17574540)
chr5 (124-205)||(1343264-1343345)
chr5 (222-283)||(7268004-7268065)
chr5 (89-186)||(18726573-18726670)
chr5 (89-186)||(33257746-33257843)
chr5 (96-173)||(38176647-38176724)
chr5 (96-173)||(38203871-38203948)
chr5 (89-173)||(40330514-40330598)
chr5 (91-218)||(17574328-17574455)
chr5 (219-278)||(18728508-18728567)
chr5 (144-215)||(29621771-29621842)
chr5 (91-218)||(30468267-30468394)
chr5 (219-278)||(32087673-32087732)
chr5 (81-204)||(35395333-35395456)
chr5 (223-278)||(35395494-35395549)
chr5 (144-215)||(42473597-42473668)
chr5 (123-201)||(6116868-6116946)
chr5 (150-211)||(2854321-2854382)
chr5 (247-283)||(27349333-27349369)
chr5 (78-170)||(32835873-32835965)
chr5 (78-186)||(42619286-42619394)
[»] scaffold0058 (2 HSPs)
scaffold0058 (144-215)||(3357-3428)
scaffold0058 (144-215)||(4529-4600)
[»] scaffold0477 (1 HSPs)
scaffold0477 (79-170)||(6669-6760)
[»] scaffold1454 (1 HSPs)
scaffold1454 (219-283)||(1421-1485)
[»] scaffold0564 (1 HSPs)
scaffold0564 (222-283)||(8422-8483)


Alignment Details
Target: chr6 (Bit Score: 172; Significance: 3e-92; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 81 - 292
Target Start/End: Complemental strand, 17952166 - 17951955
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||    
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 17952067  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17952066 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 17951967  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  17951966 aaaatacgaaaa 17951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 81 - 285
Target Start/End: Complemental strand, 35175987 - 35175783
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||||||||||| |||||||| |||||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||| |||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 35175888  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35175887 catcaatttcgtccctccgtccaaaaggtctgatagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 35175788  T
Q  281 aaaat 285  Q
    |||||    
T  35175787 aaaat 35175783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 340 - 535
Target Start/End: Complemental strand, 17951907 - 17951712
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17951907 acccctgtgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 17951808  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  17951807 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 17951712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 340 - 535
Target Start/End: Original strand, 34344065 - 34344260
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  34344065 acccctatgtttcccattaccatacatcctcacatttcatacagaacgcatcaactaagtccctggttgttcttcttccctccattttcacttctccaag 34344164  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||    
T  34344165 atcatcatcctctccagcgatcaagcttgcatttttgaaggaagatttcgtctgttttaaaggtaacttcgttcatcttcttctcctttttctctg 34344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 342 - 535
Target Start/End: Complemental strand, 35175726 - 35175534
Alignment:
Q  342 ccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaagat 441  Q
    ||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35175726 ccctatgtttgtcattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaagat 35175627  T
Q  442 catcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||| |||||||| |||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  35175626 catcatcctctccggcgatcaagattgcatttttgaaggaaga-ttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 35175534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 85 - 250
Target Start/End: Original strand, 34343847 - 34344004
Alignment:
Q  85 aaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt-gtttgatgtccat 183  Q
    |||||||||||||||||| |||||||||| | ||||| |||||| |||| |||||| |||||||||||         ||| ||||| |||||| ||||||    
T  34343847 aaaccatcaatttcgtccttgaatttttaagaattggtcaaatttgtcctccaatttaacgaaatatc---------cctcaattttgtttgacgtccat 34343937  T
Q  184 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagg 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34343938 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagg 34344004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 34345415 - 34345291
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    ||||||| |||||| || ||||||||||||  |  ||| | |||||| |||||| ||||| || ||||||||||||||||||||||||||||   ||| |    
T  34345415 gagtaaatcatcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgtaaaatgcc 34345316  T
Q  181 catcaatttcgtccctccgtccaaa 205  Q
      ||||||| |||||||||||||||    
T  34345315 tgtcaattttgtccctccgtccaaa 34345291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 17950561 - 17950666
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||||||| |||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  |||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 17950660  T
Q  181 catcaa 186  Q
     |||||    
T  17950661 aatcaa 17950666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 24662522 - 24662571
Alignment:
Q  123 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 172  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  24662522 caaattcgtcccccaatttaacgaaatatcaaaatagtccatgaatttgt 24662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 205
Target Start/End: Original strand, 4289419 - 4289542
Alignment:
Q  82 agtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtcc 181  Q
    |||||| |||||| || || |||||||||  |  ||| || |||||||||||| ||||| || |||||||||||||||||||| |||||||   ||| |     
T  4289419 agtaaatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatttaatgaaatatcaaaatagtccctaaatttgtaaaatgcct 4289518  T
Q  182 atcaatttcgtccctccgtccaaa 205  Q
     ||||||| |||||||||||||||    
T  4289519 gtcaattttgtccctccgtccaaa 4289542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 13613664 - 13613569
Alignment:
Q  123 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    ||||||||||||  ||||   |||||||||||| ||||||||||||||    || ||||||||| || ||||||||||||||||||||| ||||||    
T  13613664 caaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtccaaaaggtccattagtg 13613569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 4641353 - 4641444
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||| |||||||||||| ||||||||||||| | || | ||||||||||||||| |||||    ||||||||||  || |||||||||||    
T  4641353 tcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 4641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 3018541 - 3018451
Alignment:
Q  96 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||||||||||||| | |  | |||||| |||||||| |||||   |||||||||||  ||||||||||||||||  || |||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaa 3018451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 10568561 - 10568622
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||| ||||||||||    
T  10568561 tgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaaggactaatttgatggaaa 10568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 29077325 - 29077433
Alignment:
Q  78 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgat 177  Q
    ||||||| ||||||||| |||||||||||||||| | |  | ||||||||| ||||| |||||   |||||| ||||  |  |||||||||||||  ||     
T  29077325 atcgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagac 29077424  T
Q  178 gtccatcaa 186  Q
    |||||||||    
T  29077425 gtccatcaa 29077433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 3e-92; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 5484540 - 5484751
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||||||||||| ||||||||||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 5484639  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  5484640 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 5484739  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  5484740 aaaatacgaaaa 5484751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 80 - 292
Target Start/End: Complemental strand, 43779992 - 43779780
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| |||| ||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||    
T  43779992 cgagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 43779893  T
Q  180 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43779892 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 43779793  T
Q  280 gaaaatgcgaaaa 292  Q
    |||||| ||||||    
T  43779792 gaaaatacgaaaa 43779780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 39921494 - 39921705
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||    
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39921593  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  39921594 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacatgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39921693  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  39921694 aaaatacgaaaa 39921705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 340 - 534
Target Start/End: Original strand, 32652358 - 32652552
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32652358 acccctatgtttcccattaccatacatcctcacatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 32652457  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctct 534  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  32652458 atcatcatcctctccggcgatcaagcttgcatttttgaaggaagattttgtctgttttgaaggtaacttcgttcatcttcttctcctttttctct 32652552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 84 - 292
Target Start/End: Original strand, 32652102 - 32652310
Alignment:
Q  84 taaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccat 183  Q
    |||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  32652102 taaaccatcaatttcgtcactgaattttcagggttcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccat 32652201  T
Q  184 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  32652202 caatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttatacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaa 32652301  T
Q  284 atgcgaaaa 292  Q
    || ||||||    
T  32652302 atacgaaaa 32652310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 39083639 - 39083850
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||    
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39083738  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  39083739 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 39083838  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  39083839 aaaatacgaaaa 39083850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 86 - 285
Target Start/End: Original strand, 39189387 - 39189586
Alignment:
Q  86 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatca 185  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  39189387 aaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatca 39189486  T
Q  186 atttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaat 285  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  39189487 atttcgtccctccgtccaaaaggtccgttaatgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaat 39189586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 340 - 535
Target Start/End: Complemental strand, 43779732 - 43779537
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43779732 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 43779633  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  43779632 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 43779537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 340 - 533
Target Start/End: Complemental strand, 44994152 - 44993959
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44994152 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 44994053  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctc 533  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44994052 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctc 44993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 340 - 535
Target Start/End: Original strand, 39083898 - 39084093
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  39083898 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgtttttcttccctccattttcacttctccaag 39083997  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  39083998 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 39084093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 340 - 535
Target Start/End: Original strand, 39921753 - 39921948
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39921753 acccctgtgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccctccattttcacttctccaag 39921852  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  39921853 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 39921948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 340 - 535
Target Start/End: Complemental strand, 42880626 - 42880431
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  42880626 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctttctgttcttcttccctccattttcacttctccaag 42880527  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  42880526 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 42880431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 340 - 535
Target Start/End: Original strand, 5484799 - 5484994
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  5484799 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccatgtctgttcttcttccctccattttcacttctccaag 5484898  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||| |||||| || |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  5484899 atcatcttcctcttcggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctctg 5484994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 90 - 292
Target Start/End: Complemental strand, 44994402 - 44994200
Alignment:
Q  90 atcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaattt 189  Q
    ||||||||| ||||| |||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44994402 atcaatttcatccctaaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattt 44994303  T
Q  190 cgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaatgcga 289  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| |||    
T  44994302 cgtccctccatccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcatgtgtacagggactaaattgatggaaaatacga 44994203  T
Q  290 aaa 292  Q
    |||    
T  44994202 aaa 44994200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 75 - 292
Target Start/End: Complemental strand, 42880885 - 42880674
Alignment:
Q  75 tagatcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgttt 174  Q
    ||||| |||| |||||||||||| ||||||||||||| |||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  42880885 tagatagagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgttt 42880786  T
Q  175 gatgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaat 274  Q
    || |||||||||||||||||||      |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  42880785 gacgtccatcaatttcgtccct------aaaaggtccgttagtgtgctgtgttgacttgtacacgtgggaaaaagaaagccacgtgtacagggactaaat 42880692  T
Q  275 tgatggaaaatgcgaaaa 292  Q
    ||||||||||| ||||||    
T  42880691 tgatggaaaatacgaaaa 42880674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 429
Target Start/End: Original strand, 39189641 - 39189730
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttca 429  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  39189641 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgttcttcttccatccattttca 39189730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 5486143 - 5486038
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||| ||||  |||| ||||||||||||||||||||||||||||||||  |||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgttaaatgtc 5486044  T
Q  181 catcaa 186  Q
     |||||    
T  5486043 aatcaa 5486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 6999383 - 6999268
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||||||||||| |||||||  | | || ||||||||||||||  ||||| || ||||||||||||||||| ||||||||||   || || |||||||    
T  6999383 catcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgtaaaatatcaatcaatt 6999284  T
Q  189 tcgtccctccgtccaa 204  Q
    | ||||||||||||||    
T  6999283 tagtccctccgtccaa 6999268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 243
Target Start/End: Complemental strand, 13451064 - 13450943
Alignment:
Q  121 gccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtg 220  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |  || |||||||||  | |||||||| |||||| | || ||||   ||    
T  13451064 gccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctctgtta-catg 13450966  T
Q  221 ctgtgttggcttgtacacgtggg 243  Q
     ||||||| ||||||||||||||    
T  13450965 ttgtgttgtcttgtacacgtggg 13450943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 15450464 - 15450383
Alignment:
Q  124 aaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 205  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||||   |||| | ||||||| |||||||||||||||    
T  15450464 aaatttgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtaaaatgttcgtcaattttgtccctccgtccaaa 15450383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 25995164 - 25995080
Alignment:
Q  120 ggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 204  Q
    |||||||||  |||||||||| ||||||||||||||||||| |||||||||||   ||||| ||||||||  |||||||||||||    
T  25995164 ggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgtaaaatgtcaatcaatttattccctccgtccaa 25995080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 32653721 - 32653598
Alignment:
Q  82 agtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtcc 181  Q
    |||||| |||||| || || |||||||||  |  ||| || |||||||||||  ||||| ||||||||||||||||||| |||||||||||   |||| |    
T  32653721 agtaaatcatcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgtaaaatgttc 32653622  T
Q  182 atcaatttcgtccctccgtccaaa 205  Q
     ||||||| |||||||||||||||    
T  32653621 gtcaattttgtccctccgtccaaa 32653598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 39923098 - 39922993
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||||||||||||||||||||||  | | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  |||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 39922999  T
Q  181 catcaa 186  Q
     |||||    
T  39922998 aatcaa 39922993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 13450353 - 13450272
Alignment:
Q  123 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 204  Q
    |||||| ||||||||||| ||| |||||| ||||||||||||||||||||    |||| |||||||| || |||||||||||    
T  13450353 caaatttgtcccccaatttaacaaaatatgaaaatagtccctgaatttgtaaagtgtcaatcaatttagtacctccgtccaa 13450272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 44558617 - 44558512
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||  || |||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 44558518  T
Q  181 catcaa 186  Q
    ||||||    
T  44558517 catcaa 44558512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 11255905 - 11255841
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  11255905 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 11255841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 47941809 - 47941900
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||| |||||||||||| ||||||||||||||| || | || |||||||||| | |||||   |||||||||||  || |||||||||||    
T  47941809 tcgagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaattt 47941900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 42879283 - 42879380
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||| ||||||||||  ||||| |||||    
T  42879283 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtcaatcaa 42879380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 44992816 - 44992913
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||| ||||||  ||||| |||||    
T  44992816 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgttaaatgtcaatcaa 44992913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 51012087 - 51012148
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  51012087 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 51012148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 35996063 - 35996186
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| |||||||||||| ||| ||| ||||||| || | || |||||||||||| ||||||  | |||||||||  || ||||||||||| |  || |||    
T  35996063 gagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtc 35996162  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
    ||||||    ||||||||||||||    
T  35996163 catcaaaaaggtccctccgtccaa 35996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 281
Target Start/End: Original strand, 4519535 - 4519597
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 281  Q
    |||||||||| ||||||||||||| |||||| ||| ||| ||| || ||||||| ||||||||    
T  4519535 tgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgtgttcaaggactaatttgatgga 4519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 35997859 - 35997745
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| || |||||| || ||||||||||||| | || | |||||||||||| || |||||  | ||||||||||  || ||||||||||||||   |||    
T  35997859 cgagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgttaattgt 35997760  T
Q  180 ccatcaatttcgtcc 194  Q
    | |||||||| ||||    
T  35997759 caatcaatttagtcc 35997745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 2350631 - 2350558
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaa 154  Q
    |||| |||||||||||| ||||||||||||| | || | ||||||||| ||||| |||||   |||||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaa 2350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 2828494 - 2828397
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | |||||| || ||||| |||||   |||||||||||  || ||| ||||||||||  ||||| |||||    
T  2828494 catcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaatcaa 2828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 10372830 - 10372725
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| |||||||||||||||| | |  | ||||||||| ||||| |||||   |||||||||||  |  |||||||||||||  || |||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtc 10372731  T
Q  181 catcaa 186  Q
    ||||||    
T  10372730 catcaa 10372725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 39085235 - 39085138
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | || ||| |||||||| |||||   |||||||||||  || ||| ||||||||||  ||||| |||||    
T  39085235 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtcaatcaa 39085138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 44792942 - 44793047
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| || ||||||||||| | | || | ||||||||||||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  44792942 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 44793041  T
Q  189 tcgtcc 194  Q
    | ||||    
T  44793042 tagtcc 44793047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 2827566 - 2827622
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||||| ||||||| ||||| || ||||||||||| ||| |||||||||| |||||    
T  2827566 tgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 2827622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 35996225 - 35996281
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  35996225 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 51041893 - 51041837
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||||| ||| ||||||||| || ||||||||||||||| || ||||||| |||||    
T  51041893 tgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggactaatttgat 51041837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 2e-90; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 80 - 292
Target Start/End: Complemental strand, 4322697 - 4322485
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  4322697 cgagtaaaccatcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacat 4322598  T
Q  180 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  4322597 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagtcacgtgtacagggactaaattgatg 4322498  T
Q  280 gaaaatgcgaaaa 292  Q
    |||||| ||||||    
T  4322497 gaaaatacgaaaa 4322485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 45463670 - 45463881
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| |||||||||||||||||||||||||| |||| | |||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||    
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 45463769  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  45463770 catcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatgg 45463869  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  45463870 aaaatacgaaaa 45463881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 340 - 534
Target Start/End: Original strand, 45463929 - 45464123
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    ||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  45463929 acccctatgtttgtcattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtctgtttttcttccctccattttcacttctccaag 45464028  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctct 534  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  45464029 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtatgttttgaaggtaacttcgttcatcttcttctcctttttctct 45464123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 80 - 292
Target Start/End: Complemental strand, 48303774 - 48303562
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    |||||||||||||||||||||||||||||||| || ||| || ||||| ||||| | |||| ||| ||||||||||||||||||||||||| ||||| ||    
T  48303774 cgagtaaaccatcaatttcgtccctgaattttcagcgatcggtcaaatccgtcctctaatttaacaaaatatcaaaatagtccctgaatttatttgacgt 48303675  T
Q  180 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||     
T  48303674 ccatcaatttcgtccctccgtccaaaaggtctgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgata 48303575  T
Q  280 gaaaatgcgaaaa 292  Q
    |||||| ||||||    
T  48303574 gaaaatacgaaaa 48303562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 340 - 535
Target Start/End: Original strand, 34691254 - 34691449
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  34691254 acccctatgttttccactaccatacatcctcacatttcatacagaacacatcaactaagtcactgtttgttcttcttccctccattttcacttctccaag 34691353  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  34691354 atcatcatcctctccggtgatcaagcttgcattttttaaggaagaattcgttcattttgaaggtaacttcgttcatcttcttctcctttttctctg 34691449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 340 - 520
Target Start/End: Complemental strand, 48303514 - 48303334
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  48303514 acccctatgtttcccattaccatacatcctcacatttcatacagaacacatcaattaagtccctgtctgttcttcttccctccattttcacttctccaag 48303415  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttct 520  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||  ||||||||||    
T  48303414 atcatcatcctctccggcgatcaagcttgcattttagaaggaagatttcgtctgttttgaaggtaactttgttcatcttct 48303334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 34690995 - 34691206
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||||| |||||||||| ||| |||    
T  34690995 gagtaaaccatcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgtc 34691094  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    |||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||    
T  34691095 catcaatttcgtccctccatccaaaaggtatgttagtgtgttgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgatgg 34691194  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  34691195 aaaatacgaaaa 34691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 340 - 535
Target Start/End: Complemental strand, 4322437 - 4322248
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||   |||||||||||| |||||||||    
T  4322437 acccctatgtttgccattaccatacatgctcacctttcatacagaacacatcaactaagtccctgtctgttcttc---cctccattttcacttctccaag 4322341  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| | |||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||   ||||||||||||||||||    
T  4322340 atcatcatcctctccggcaatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttca---tcttctcctttttctctg 4322248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 30109785 - 30109708
Alignment:
Q  86 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccc 163  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||||||||||||||    
T  30109785 aaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccc 30109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 34785188 - 34785080
Alignment:
Q  96 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccc 195  Q
    ||||||||||||||| || | || ||||||| |||||| |||| | |||||||||||||||||||||||||||||||   ||||| |||||||| |||||    
T  34785188 ttcgtccctgaatttgtacgaatcggccaaagtcgtcctccaaattaacgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccc 34785089  T
Q  196 tccgtccaa 204  Q
    |||||||||    
T  34785088 tccgtccaa 34785080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 34692797 - 34692715
Alignment:
Q  123 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 205  Q
    |||||| || || ||||| |||||||||| ||||||||||||||||||||   |||||||||||||| |||||||||||||||    
T  34692797 caaatttgtacctcaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtccatcaattttgtccctccgtccaaa 34692715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21027017 - 21026961
Alignment:
Q  23 tcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  21027017 tcataataaataaataaataaaaaacagcagttttggaaagagagaataacatagat 21026961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 48302191 - 48302275
Alignment:
Q  121 gccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 205  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||||   |||| | ||||||| |||| ||||||||||    
T  48302191 gccaaattcgtccctcaatttaacgaaatatcaaaatagtctctgaatttgtaaaatgttcgtcaattttgtccttccgtccaaa 48302275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 30108564 - 30108670
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| || |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||    
T  30108564 cgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 30108663  T
Q  180 ccatcaa 186  Q
    | |||||    
T  30108664 caatcaa 30108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 46810713 - 46810810
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | |||| ||||||||| ||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  46810713 catcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 46810810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 28172241 - 28172293
Alignment:
Q  27 aataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 79  Q
    ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  28172241 aataaataaataaatacaaaacagcaattttgaaaagagagagaaacatagat 28172293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 29996575 - 29996504
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| || |||||||||||    || ||||||||| ||||||||||| ||||||||||||||||    
T  29996575 cgaaatatcaaattaatccctgaattttacagacgtccatcaaattcgtccctccatccaaaaggtccgtta 29996504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 38613625 - 38613684
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 281  Q
    ||||||| |||||||||||||||||||| ||||||| ||| || ||||||| ||||||||    
T  38613625 tgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgatgga 38613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 46996826 - 46996703
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| |||||||||||||||| | |  | |||||| |||||||| |||||   |||||||||||  ||||| ||||||||||  || |||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtc 46996727  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
    ||||||    ||||||||||||||    
T  46996726 catcaaaaaggtccctccgtccaa 46996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 47341810 - 47341719
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 172  Q
    |||| ||||||||| ||||||| |||||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||    
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 11682846 - 11682904
Alignment:
Q  146 aaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 204  Q
    |||||||||| |||||| |||||| ||| || |||||||||||| ||||||||||||||    
T  11682846 aaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaa 11682904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 38613608 - 38613514
Alignment:
Q  78 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 172  Q
    ||||||| ||||||||| ||||||| | |||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||    
T  38613608 atcgagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 38613514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 48704248 - 48704302
Alignment:
Q  120 ggccaaattcgtcccccaattg-aacgaaatatcaaaatagtccctgaatttgtt 173  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| |||||||||    
T  48704248 ggccaaattcgtcccccagttttaacgaaatatcaaaatagtccccgaatttgtt 48704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 23955368 - 23955323
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtccc 134  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||    
T  23955368 catcaacttcgtctctgaatttttatggattggccaaattcgtccc 23955323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 36762763 - 36762666
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| |||| ||||||||| ||||| |||||    ||||||||||  ||  |||||||||||||  ||||| |||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgttaaatgtcaatcaa 36762666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 40346071 - 40346108
Alignment:
Q  42 aaaaaacagcagttttggaaagagagagaaacatagat 79  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  40346071 aaaaaacagcagttttggaaagagagaaaaacatagat 40346108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 8423407 - 8423316
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||| |||||||||||| ||||||||||||| | || |  |||||||| ||||| |||||   |||||||||||  || |||||||||||    
T  8423407 tcgagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 8423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 20478105 - 20478176
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  20478105 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 20478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 23953967 - 23954026
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 281  Q
    ||||||| ||||||||||||| |||||||||||||| ||| |  ||||||| ||||||||    
T  23953967 tgtgttgtcttgtacacgtggcaaaaaggaagccacgtgttccaggactaatttgatgga 23954026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 33038913 - 33038798
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| ||||||| |||||||||| || | || ||||||| |||| |||||   |||||||||||  |||||||||||||| |  || |||||||||      
T  33038913 catcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaa 33038814  T
Q  189 tcgtccctccgtccaa 204  Q
      ||||||||||||||    
T  33038813 aggtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 47341647 - 47341588
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  47341647 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 47341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 56393 - 56466
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagt 217  Q
    |||||||||||| ||||||||||||||    || |||||||||||   ||||||||||||||| ||| ||||||    
T  56393 cgaaatatcaaattagtccctgaattttacagacgtccatcaattcactccctccgtccaaaatgtctgttagt 56466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 1546449 - 1546510
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||| || |||||  |||||||||| ||| |||||| ||||||||||||||||||    
T  1546449 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 1546510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 4321046 - 4321143
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | |||||| ||||||||  ||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  4321046 catcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 4321143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 8421424 - 8421529
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| || ||||||||||| | | || | ||||||||||||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  8421424 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 8421523  T
Q  189 tcgtcc 194  Q
    | ||||    
T  8421524 tagtcc 8421529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 35342433 - 35342538
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| || ||||||||||| ||| || | ||||||||| ||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  35342433 catcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 35342532  T
Q  189 tcgtcc 194  Q
    | ||||    
T  35342533 tagtcc 35342538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 35344414 - 35344325
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||| |||||||||||| ||||| ||||||| | || |  |||||||||||||| |||||   |||||||||||  || |||||||||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 45465267 - 45465170
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| ||||||| |||||||||| || | || ||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  45465267 catcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 45465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 46439492 - 46439431
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || | || |||||| |||||| ||||||||||||||||||    
T  46439492 tgtgttgtcttgtacacgtgtcaacagggcagccacgtgtacatggactaaattgatggaaa 46439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 46994668 - 46994765
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | |||||| |||||||  |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  46994668 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 46994765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 1546384 - 1546424
Alignment:
Q  178 gtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||  | ||||||||||||||||||||||||||||    
T  1546384 gtccatcaaaatggtccctccgtccaaaaggtccgttagtg 1546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 2492496 - 2492548
Alignment:
Q  230 cttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaa 282  Q
    ||||||||||||| |||||||||| ||| ||| || ||||||| |||||||||    
T  2492496 cttgtacacgtggcaaaaaggaagtcacgtgttcaaggactaatttgatggaa 2492548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 27955378 - 27955506
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| ||||||| |||||||||| ||||  || |||||| |||| |||||  ||||||||||||  || |  ||||||||||  || |||||||||      
T  27955378 catcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaag 27955477  T
Q  189 tcgtccctccgtccaaaaggtccgttagt 217  Q
      ||||||||||||||  | |||||||||    
T  27955478 aggtccctccgtccaagtgctccgttagt 27955506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 30940390 - 30940326
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| | ||||||| ||  || |||| |||||| |||||| ||||||||||||||||||    
T  30940390 tgctgtgttgtcctgtacacatgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 30940326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 279
Target Start/End: Complemental strand, 35693331 - 35693275
Alignment:
Q  223 gtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    |||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||    
T  35693331 gtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 35693275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 40784508 - 40784564
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||||| ||| ||||||||| || ||||||||||||||| || ||||||| |||||    
T  40784508 tgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggactaatttgat 40784564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 2e-90; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 80 - 292
Target Start/End: Original strand, 28246662 - 28246874
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||    
T  28246662 cgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgt 28246761  T
Q  180 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28246762 ccatcaatttcgtccctctgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 28246861  T
Q  280 gaaaatgcgaaaa 292  Q
    |||||| ||||||    
T  28246862 gaaaatacgaaaa 28246874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 86 - 292
Target Start/End: Complemental strand, 11023131 - 11022926
Alignment:
Q  86 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatca 185  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  11023131 aaccatcaatttcgtccctgaattttcaggg-tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatca 11023033  T
Q  186 atttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaat 285  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  11023032 attccgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaaat 11022933  T
Q  286 gcgaaaa 292  Q
     ||||||    
T  11022932 acgaaaa 11022926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 340 - 535
Target Start/End: Complemental strand, 11022878 - 11022683
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  11022878 acccctatgtttgccattaccatacatcctcatatttcatacataacacatcaactaagtccctgtttgttcttcttccctccattttcacttctccaag 11022779  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  11022778 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 11022683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 76 - 285
Target Start/End: Original strand, 38148490 - 38148700
Alignment:
Q  76 agatcgagtaaaccatcaatttcgtccctgaatttttagggattgg-ccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgttt 174  Q
    |||| ||||||||||||||||||||||||||||||| || ||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  38148490 agattgagtaaaccatcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgttt 38148589  T
Q  175 gatgtccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaat 274  Q
    || ||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  38148590 gacgtccatcaatttcgtccatccgtccaaaaggtctgttagtgtgttgtattggcttgtacacgtcggaaaaaggaagccacgtgtacagggactaaat 38148689  T
Q  275 tgatggaaaat 285  Q
    |||||||||||    
T  38148690 tgatggaaaat 38148700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 340 - 532
Target Start/End: Original strand, 38148755 - 38148947
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| |||||||||    
T  38148755 acccctatgtttctcattaccatacatcctcacatttcatacagaacacatcaactaagttccagtctgttcttcttccctccattttcacttctccaag 38148854  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttct 532  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||    
T  38148855 atcatcatcctctcccgcgatcaagcttgcatttttgaaggaagatttcgtctggtttaaaggtaacttcgttcatcttcttctcctttttct 38148947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 340 - 534
Target Start/End: Original strand, 28246922 - 28247116
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| || ||||||    
T  28246922 acccctatgtttaccattaccatacatcctcatatttcatacagaacacatcaactaagtgtctgtctgttcttcttccctccattttcacttgtccaag 28247021  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctct 534  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  28247022 atcatcatcctctccggcgatcaagattgcatttttgaaggaagattttgtttgttttgaaggtaactttgttcatcttcttctcctttttctct 28247116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 89 - 283
Target Start/End: Complemental strand, 11315451 - 11315258
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| ||||||| | |||||||| | || |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||  || |||||||||      
T  11315451 catcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaa 11315352  T
Q  189 tcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    | ||||||||||||||| | || | ||   || ||||||| ||||||||||||  || |||||||||||||||||| |||| || ||||||||||    
T  11315351 tggtccctccgtccaaatgttctgcta-catgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgatggaaa 11315258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 39561 - 39645
Alignment:
Q  86 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||||| |||||   |||||||||||  || |||||||||||    
T  39561 aaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19271302 - 19271366
Alignment:
Q  15 ctgagagctcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 79  Q
    |||||||||||||| |||| || ||||||| ||||||||||||||||||||||| |||| |||||    
T  19271302 ctgagagctcataacaaataaagaaataaataacagcagttttggaaagagagaaaaacgtagat 19271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 38150069 - 38149986
Alignment:
Q  117 attggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtc 201  Q
    |||||||||||||||||| ||||| |||||||||||||||||||   |||||||||   |||||| ||||||| |||||||||||    
T  38150069 attggccaaattcgtccctcaatttaacgaaatatcaaaatagt-tatgaatttgtaaaatgtccgtcaattttgtccctccgtc 38149986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 39664882 - 39664755
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||| ||||||| |||||||| |   || |||||||||||||||| ||||  |||||||||| |  ||||||||||||||    || |||||||||  |     
T  39664882 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 39664783  T
Q  191 gtccctccgtccaaaaggtccgttagtg 218  Q
    ||||||||||||||||| ||||||||||    
T  39664782 gtccctccgtccaaaagctccgttagtg 39664755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 28248258 - 28248161
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  28248258 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 28248161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 17946159 - 17946231
Alignment:
Q  146 aaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||  | |||||||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  17946159 aaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 17946231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31638791 - 31638834
Alignment:
Q  1 tttttcatccacaactgagagctcataataaatgaataaataaa 44  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  31638791 tttttcatccacaactgagagctcacaacaaatgaataaataaa 31638834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 7744106 - 7744180
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||||  | |||||||||||| | | |||||||||||  | |||||||| |||||||||||||||||||    
T  7744106 cgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtg 7744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 41225 - 41144
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||| |||||||||||||||| | || | ||||||||||||||| |||||   |||||||||||  || |||||||||||    
T  41225 catcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 11021541 - 11021638
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  11021541 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 11021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 37417273 - 37417378
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||  ||||||| |||||||| | || | |||||||||| |||| |||||   |||||||||||  ||||||||||||||||  || |||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 37417372  T
Q  181 catcaa 186  Q
    ||||||    
T  37417373 catcaa 37417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 25619665 - 25619765
Alignment:
Q  86 aaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatca 185  Q
    ||||||||| ||||||| |||||||||| || | || ||||||| |||| |||||   | |||||||||  ||||||||||||||||   ||||||||||    
T  25619665 aaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatca 25619764  T
Q  186 a 186  Q
    |    
T  25619765 a 25619765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 37020572 - 37020642
Alignment:
Q  145 gaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    ||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  37020572 gaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 37020642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 6797669 - 6797726
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||    
T  6797669 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 6797726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 10716865 - 10716804
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || ||||||||||| |||||| |||| || ||||||||||    
T  10716865 tgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgatggaaa 10716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 14389066 - 14389005
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||| ||||||||||    
T  14389066 tgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaacttgatggaaa 14389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 15372499 - 15372588
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||| |||||||||||| ||||||||||||| | || | ||||||||||| ||| |||||   | |||||||||  || |||||||||||    
T  15372499 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaattt 15372588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 17946256 - 17946317
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| | ||||||| ||  |||||||||| ||| |||||| ||||||||||||||||||    
T  17946256 tgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 17946317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 37417432 - 37417485
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaa 272  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || |||||||    
T  37417432 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 37417485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 41706539 - 41706628
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||| |||||||||||| || |||||||||| | || | || |||||||||||| |||||   |||||||||||  || |||||||||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 40560382 - 40560446
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| | ||||| ||||  || |||| |||||| |||||| ||||||||||||||||||    
T  40560382 tgctgtgttgtcatgtacgcgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 40560446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 42519190 - 42519126
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| | ||||||||||  || |||| || ||| |||||| ||||||||||||||||||    
T  42519190 tgctgtgttgtcctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 42519126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 2e-90; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 80 - 292
Target Start/End: Original strand, 5783363 - 5783575
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||    
T  5783363 cgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 5783462  T
Q  180 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  5783463 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatg 5783562  T
Q  280 gaaaatgcgaaaa 292  Q
    |||||| ||||||    
T  5783563 gaaaatacgaaaa 5783575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 340 - 524
Target Start/End: Original strand, 5783623 - 5783807
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  5783623 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctgtttgttcttcttccctccattttcacttctccaag 5783722  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctc 524  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||    
T  5783723 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgctttgaaggtaacttcgttcatcttcttctc 5783807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 34778252 - 34778125
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||| ||||||| |||||||| |   || |||||||| ||||||  ||||   |||||||||||| ||||||||||||||    ||||||||||||  |     
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatg 34778153  T
Q  191 gtccctccgtccaaaaggtccgttagtg 218  Q
    ||||||||||||||||| ||||||||||    
T  34778152 gtccctccgtccaaaagctccgttagtg 34778125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 42134482 - 42134605
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||||| || | ||||||| || |||| |||||   |||||||||||  ||||||||||||||||  || |||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 42134581  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
    ||||||    ||||||||||||||    
T  42134582 catcaaaaaggtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 46583617 - 46583546
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| || |||||||||||||||||||||||||    
T  46583617 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatttgtccctccgtccaaaaggtccgtta 46583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 33602704 - 33602632
Alignment:
Q  145 gaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagt 217  Q
    ||||||||||| ||||||||||||||    || |||| |||| || |||||||||||||||||||||||||||    
T  33602704 gaaatatcaaattagtccctgaattttacagacgtccgtcaaattagtccctccgtccaaaaggtccgttagt 33602632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 34041904 - 34041828
Alignment:
Q  96 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 172  Q
    |||||||||||||||  | | || | ||||||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  34041904 ttcgtccctgaatttgcacgaatggaccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgt 34041828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 38586213 - 38586157
Alignment:
Q  23 tcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacatagat 79  Q
    |||||| |||| ||||||||||||||| |||||||| ||||||||| ||||||||||    
T  38586213 tcataacaaataaataaataaaaaacaacagttttgaaaagagagaaaaacatagat 38586157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 42134641 - 42134700
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||||| ||||||||||||| || ||||||||||||||| || ||||||| |||||    
T  42134641 tgctgtgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgat 42134700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 18184068 - 18183962
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| ||||||||| ||||||  |||||||||| || | ||||||| || |||| |||||   |||||||||||  ||||||||||||||||  || ||    
T  18184068 cgagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 18183969  T
Q  180 ccatcaa 186  Q
    |||||||    
T  18183968 ccatcaa 18183962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 2869741 - 2869802
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||||||||||||||    
T  2869741 tgtgttgtcctgtacacgtgtcaacaaggcagccacatgtacaaggactaaattgatggaaa 2869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 26225516 - 26225455
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || || | ||||||||||||| ||||||||||||||||||    
T  26225516 tgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgatggaaa 26225455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 34778101 - 34778040
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  34778101 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 4856080 - 4855956
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||| ||||||| |||||||| |   || |||||||| ||||||  ||||   |||||||||||| ||||||||||||||    || |||||||||  |     
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 4855981  T
Q  191 gtccctccgtccaaaaggtccgtta 215  Q
    ||||||||||||||||| |||||||    
T  4855980 gtccctccgtccaaaagctccgtta 4855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 15104600 - 15104664
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||| ||||||||||    
T  15104600 tgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgatggaaa 15104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 18183906 - 18183846
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaa 282  Q
    ||||||| ||||||||||||| ||||| |||||||| ||| || ||||||| |||||||||    
T  18183906 tgtgttgtcttgtacacgtggcaaaaaagaagccacgtgttcaaggactaatttgatggaa 18183846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 27087441 - 27087505
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||| ||||||||||||    
T  27087441 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactgaattgatggaaa 27087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 9121729 - 9121658
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  9121729 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 9121658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 45380949 - 45380890
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  45380949 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 45380890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 5784959 - 5784853
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| || |||||| |||||||||||||||| | || | || ||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||    
T  5784959 cgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgt 5784860  T
Q  180 ccatcaa 186  Q
    | |||||    
T  5784859 caatcaa 5784853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 26765376 - 26765450
Alignment:
Q  3 tttcatcca-caactgagagctcataataaatgaataaataaaaaacagcagttttggaaagagagagaaacata 76  Q
    ||||||||| |||||||||| |||||| |||| || ||||||| ||| ||||||||| ||| ||||| |||||||    
T  26765376 tttcatccaacaactgagagatcataacaaataaagaaataaataactgcagttttgaaaatagagaaaaacata 26765450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 27940607 - 27940681
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaa 154  Q
    ||||| |||||||||||| ||||||||||||| |  | |||| |||||||||||| |||||   |||||||||||    
T  27940607 cgagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaa 27940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 33679258 - 33679364
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| || ||||||||| |||| |||||||||| || |  |||||||||||||| |||||   |||||||||||  || ||| ||||||||||  ||||    
T  33679258 cgagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgt 33679357  T
Q  180 ccatcaa 186  Q
    | |||||    
T  33679358 caatcaa 33679364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 4855929 - 4855868
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| || ||| |||||| ||||||||||||||||||    
T  4855929 tgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 4855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 11152553 - 11152650
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | |||||| |||||||| |||||   |||||||||||  || |||| |||||||||  ||||| |||||    
T  11152553 catcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtcaatcaa 11152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 27952583 - 27952478
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| || ||||||||||| | | || | ||||||||||||||| |||||   |||||||||||  || ||||||||||||||   |||| |||||||    
T  27952583 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 27952484  T
Q  189 tcgtcc 194  Q
    | ||||    
T  27952483 tagtcc 27952478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 31803783 - 31803686
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | |||||| |||||||  |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  31803783 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 31803686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 33685372 - 33685299
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaa 154  Q
    |||| ||||||||| |||||||||||||||||| || | || ||||||| |||| |||||   |||||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaa 33685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 3013431 - 3013371
Alignment:
Q  223 gtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||| | ||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  3013431 gtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 3013371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 46638769 - 46638713
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||||| ||||||| ||||| |||||||||||||| ||| ||||||| || |||||    
T  46638769 tgtgttgtcttgtacgcgtggcaaaaaggaagccacgtgttcagggacgaatttgat 46638713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 51121970 - 51122042
Alignment:
Q  146 aaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||  | |||||||||||| | | | |||||||||  | |||||||||||||||||||| |||||||    
T  51121970 aaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtg 51122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 5e-88; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 80 - 292
Target Start/End: Complemental strand, 40020760 - 40020548
Alignment:
Q  80 cgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgt 179  Q
    ||||| ||||||||||||||||||||||| ||||||| |  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||    
T  40020760 cgagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgt 40020661  T
Q  180 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatg 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  40020660 ccatcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaaaccacgtgtacagggactaaattgatg 40020561  T
Q  280 gaaaatgcgaaaa 292  Q
    |||||| ||||||    
T  40020560 gaaaatacgaaaa 40020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 340 - 533
Target Start/End: Complemental strand, 28433580 - 28433387
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  28433580 acccctatgtttcccattaccatacatcctcatatttcatacagaacacatcaactaagtccctatctattcttcttccctccattttcacttctccaag 28433481  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctc 533  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28433480 atcatcatcctctccggcgatcaagcttgcatttttgaaagaagatttcgtctgttttgaaggtaacttcattcatcttcttctcctttttctc 28433387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 340 - 535
Target Start/End: Complemental strand, 40020500 - 40020305
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40020500 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtctctgtctgttcttcttccctccattttcacttctccaag 40020401  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40020400 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtttgttttgaaggtaactttgttcatcttcttctcctttttctctg 40020305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 87 - 292
Target Start/End: Complemental strand, 28433834 - 28433629
Alignment:
Q  87 accatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcga 28433735  T
Q  187 tttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaaatg 286  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||     
T  28433734 tttcgtccctccgtccaaaaggttcgttagtttgttgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaaata 28433635  T
Q  287 cgaaaa 292  Q
    ||||||    
T  28433634 cgaaaa 28433629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 23811656 - 23811532
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||||||  ||||| ||||||||||||||   | |||| |||||||||||||||||||||  || ||||||||||||||||| |||||||||   |||||    
T  23811656 gagtaaattatcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgtaaaatgtc 23811557  T
Q  181 catcaatttcgtccctccgtccaaa 205  Q
      |||||||||||||||||||||||    
T  23811556 agtcaatttcgtccctccgtccaaa 23811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 32822361 - 32822466
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||||| |||| |||||||||| |||| |||||     |||||||||  ||||||||||||||||  ||||||    
T  32822361 gagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtc 32822460  T
Q  181 catcaa 186  Q
    ||||||    
T  32822461 catcaa 32822466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 27691164 - 27691286
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||| ||||||| |||||||| |   || |||||| ||||||||  ||||   |||||||||||| ||||||||||||||    || ||||||||| | |    
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcc 27691263  T
Q  191 gtccctccgtccaaaaggtccgt 213  Q
    |||||||||||||||||||||||    
T  27691264 gtccctccgtccaaaaggtccgt 27691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 9184391 - 9184507
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||||||||||| |||||||  | | || ||||||||||||| ||||| |   |||||||||||| ||||||||||||||||  || ||| ||| |      
T  9184391 catcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaa 9184490  T
Q  189 tcgtccctccgtccaaa 205  Q
    | |||||||||||||||    
T  9184491 tggtccctccgtccaaa 9184507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 13108322 - 13108258
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  13108322 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 13108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 38547386 - 38547450
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  38547386 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 38547450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 31201269 - 31201178
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||| |||||||||||| ||||||||||||| | || | ||||||||||||||  |||||   |||||||||||  || |||||||||||    
T  31201269 tcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaattt 31201178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 42897898 - 42897775
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| | ||||| |||||||||| || | ||||||||||||||| |||||    ||||||||||  |||||| |||||||||  || |||    
T  42897898 gagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 42897799  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
    ||||||    ||||||||||||||    
T  42897798 catcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 5036611 - 5036672
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  5036611 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 5036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 8609773 - 8609709
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||   | |||| |||||| |||||| ||||||||||||||||||    
T  8609773 tgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggactaaattgatggaaa 8609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 11031452 - 11031552
Alignment:
Q  104 tgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtcca 203  Q
    ||||||| || |||| ||||||| |||| | ||||||   |||||||||||| |||| ||||| |||||   ||||| |||||||| |||||||||||||    
T  11031452 tgaatttgtaaggatgggccaaaatcgttctccaattatgcgaaatatcaaattagttcctgagtttgtcatatgtcaatcaatttagtccctccgtcca 11031551  T
Q  204 a 204  Q
    |    
T  11031552 a 11031552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 28432293 - 28432345
Alignment:
Q  153 aaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 205  Q
    ||||||||||||||||||||   |||||| ||||||| |||||||||||||||    
T  28432293 aaaatagtccctgaatttgtaaaatgtccgtcaattttgtccctccgtccaaa 28432345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 42897739 - 42897680
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||||| ||||||||||||| || ||||||||||| ||| || ||||||| |||||    
T  42897739 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 42897680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 8609892 - 8609794
Alignment:
Q  120 ggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||||||||  ||||   ||||||||| |  ||||||||||||||    || |||||||||  | ||||||||||||||||| ||||||||||    
T  8609892 ggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 8609794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 8654663 - 8654717
Alignment:
Q  224 tgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||| ||||||||||||| || ||||||||||||||| || ||||||| |||||    
T  8654663 tgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgat 8654717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 13108417 - 13108343
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||||| ||||||||||||||    || |||||||||  | ||||||||||||||||| | ||||||||    
T  13108417 cgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtg 13108343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 38547291 - 38547365
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 218  Q
    |||||||||||| ||||||||||||||    || |||||||||  | |||||||| |||||||| ||||||||||    
T  38547291 cgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtg 38547365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 42941947 - 42941997
Alignment:
Q  233 gtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||  || |||| ||||||||||||| ||||||||||||||||||    
T  42941947 gtacacgtgtcaacaaggcagccacatgtacaaggactaaattgatggaaa 42941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 31823559 - 31823462
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | |||||| |||||||| |||||   |||||||||||  || ||||| ||||||||  ||||| |||||    
T  31823559 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatgtcaatcaa 31823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 40019164 - 40019261
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| ||||||  |||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  40019164 catcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 40019261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 3e-83; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 41944576 - 41944785
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||    
T  41944576 gagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttttttgacgtc 41944675  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
     |  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  41944676 ga--aatttcgtccttccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccgcgtgtacagggactaaattgatgg 41944773  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  41944774 aaaatacgaaaa 41944785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 340 - 535
Target Start/End: Original strand, 41944833 - 41945028
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||    
T  41944833 acccctatgttttccattaccataaatcctcacattttatacagaacacatcaactaagtccctgtctttttttcttccctccattttcacttctccaag 41944932  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttctctg 535  Q
    |||||||| ||||| |  |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  41944933 atcatcattctctctggtgatcaagcttgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttctctg 41945028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 30501156 - 30501240
Alignment:
Q  120 ggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaa 204  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||   ||||| |||||||| ||||||||||||||    
T  30501156 ggccaaattcgtcccccaatttaacgaaatatcaaaatagtttctgaatttgtaaaatgtcaatcaatttagtccctccgtccaa 30501240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 40963481 - 40963369
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    |||||| |||||||||||||||  | | || || ||||||||| |||||||| |||||||||| ||||||||||||||||||||   ||||| |||||||    
T  40963481 catcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtcaatcaatt 40963382  T
Q  189 tcgtccctccgtc 201  Q
    | |||||||||||    
T  40963381 tagtccctccgtc 40963369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 41946190 - 41946066
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    ||||||| ||||||||| || |||||||||  |  ||| || |||||| ||||| ||||| ||||||||||||||||||||| |||||||||   |||||    
T  41946190 gagtaaatcatcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgtaaaatgtc 41946091  T
Q  181 catcaatttcgtccctccgtccaaa 205  Q
    | ||||||| |||||||||||||||    
T  41946090 cgtcaattttgtccctccgtccaaa 41946066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 44794270 - 44794341
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||    
T  44794270 cgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaaaggtccgtta 44794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 3152299 - 3152228
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| | ||||||||||||||||||||||||||    
T  3152299 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtccgtta 3152228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 48635467 - 48635372
Alignment:
Q  78 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 173  Q
    ||||||| || ||||||||||||||||||||||| | |||| || ||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  48635467 atcgagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 48635372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 23774147 - 23774257
Alignment:
Q  76 agatcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttg 175  Q
    |||| |||| ||||||||| ||||||| |||||||| | |  | ||||||||||||||| |||||   |||||||||||  ||||||||||||||||  |    
T  23774147 agattgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcag 23774246  T
Q  176 atgtccatcaa 186  Q
    | |||||||||    
T  23774247 acgtccatcaa 23774257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 31887417 - 31887355
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgga 281  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| || ||||||| ||||||||    
T  31887417 tgctgtgttgtcttgtacacgtggcaaaaaggaagccatatgttcaaggactaatttgatgga 31887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 2226138 - 2226074
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  2226138 tgctgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgatggaaa 2226074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 40509035 - 40508899
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||| | || | ||||||||||||||| |||||   |||||||||||  || ||| |||||||||  || |||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtc 40508936  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagt 217  Q
    ||||||    ||||||||||||||  | |||||||||    
T  40508935 catcaaaaatgtccctccgtccaagtgttccgttagt 40508899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 2660275 - 2660346
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| |||||| |||||||    || ||||||||| ||||||||||||||||||||||| ||||    
T  2660275 cgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtctgtta 2660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 48633877 - 48634000
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||| | || | || |||||||||||  |||||   |||||||||||  ||||||||||||||||  || |||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 48633976  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
    ||||||    ||||||||||||||    
T  48633977 catcaaaaaggtccctccgtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 7884856 - 7884795
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| ||||||||||| | ||||||||||||||||||    
T  7884856 tgtgttgtcttgtacacgtgtcaacaaggcagccacatgtataaggactaaattgatggaaa 7884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 23888735 - 23888678
Alignment:
Q  221 ctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||| ||||||| ||||| || ||||||||||||||| |||||||||| |||||    
T  23888735 ctgtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggactaatttgat 23888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 45897058 - 45897155
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| ||||||| |||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  45897058 catcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 45897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 51454376 - 51454283
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 172  Q
    |||||| ||||||||| ||||||| |||||||| | |||| |||||||||| | || |||||   |||||||||||| |||||  |||||||||    
T  51454376 tcgagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 53190742 - 53190681
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  53190742 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 53190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 30599903 - 30599839
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||| ||  || |||| |||||| |||||| ||||||||||||||||||    
T  30599903 tgctgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 30599839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 282
Target Start/End: Complemental strand, 33113135 - 33113083
Alignment:
Q  230 cttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaa 282  Q
    ||||||||||||| |||||||||||||| ||| || ||||||| |||||||||    
T  33113135 cttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgatggaa 33113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 31887576 - 31887453
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||| | |||| || |||||||  ||  |||||   |||||||||||  ||||||||||||||||  ||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtc 31887477  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
     |||||    ||||||||||||||    
T  31887476 tatcaaaaaggtccctccgtccaa 31887453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 53190893 - 53190766
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||| ||||||| |||||||| |   || |||||||||||||||  ||||   ||||||||| |  ||||||||||||||    || |||||||||  |     
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 53190794  T
Q  191 gtccctccgtccaaaaggtccgttagtg 218  Q
    ||||||||||||||||| ||||||||||    
T  53190793 gtccctccgtccaaaagctccgttagtg 53190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 35905692 - 35905634
Alignment:
Q  225 gttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  35905692 gttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 35905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 54898601 - 54898659
Alignment:
Q  225 gttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  54898601 gttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 54898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 17515472 - 17515533
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||| ||  || |||| |||||| |||||| ||||||||||||||||||    
T  17515472 tgtgttgtcttgtacacttgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 17515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 23293152 - 23293091
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| | ||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  23293152 tgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 23293091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 23887206 - 23887303
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| ||||||| |||||||||| || | ||| || |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  23887206 catcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttcaatgtcaatcaa 23887303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 33111849 - 33111946
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||| | || | || ||||||| |||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  33111849 catcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 33111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 33113304 - 33113199
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| || |||| |||||||||| || | ||||||| || |||| |||||   |||||||||||  |||||||| |||||||  || |||    
T  33113304 gagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtc 33113205  T
Q  181 catcaa 186  Q
    ||||||    
T  33113204 catcaa 33113199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 41977911 - 41977972
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| || ||| |||||| ||||||||||||||||||    
T  41977911 tgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 41977972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 48634051 - 48634099
Alignment:
Q  230 cttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    ||||||||||||| |||||||||||||| ||| || ||||||| |||||    
T  48634051 cttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgat 48634099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 2e-78; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 340 - 532
Target Start/End: Complemental strand, 42620628 - 42620436
Alignment:
Q  340 acccctatgtttcccattaccatacatcctcacatttcatacataacacatcaactaagtccctgtctgttcttcttccctccattttcatttctccaag 439  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  42620628 acccctatgtttgccattaccatacatcctcatatttcatacagaacacatcaactaagtccctatttgttcttcttccctccattttcacttctccaag 42620529  T
Q  440 atcatcatcctctccgacgatcaagcttgcattttttaaggaagatttcgtttgttttgaaggtaacttcattcatcttcttctcctttttct 532  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  42620528 atcatcatcctctccggcgatcaagattgcatttttgaaggaagatttcgtctgttttgaaggtaacttcgttcatcttcttctcctttttct 42620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 81 - 292
Target Start/End: Complemental strand, 42620887 - 42620676
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||||||| |||| ||||||| |||| | ||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| |||    
T  42620887 gagtcaaccatcaatttcatcccggaattttcaggggtcggccaaattcgtcccccaatttaaccaaatatcaaaatagtctctgaatttgtttgacgtc 42620788  T
Q  181 catcaatttcgtccctccgtccaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatgg 280  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  42620787 catcaatttcatccctccgttcaaaaggtccgttagtgtgctgtgttggcttgtacacgtgggaaaaagaaagccacgtgtatagggactaaattgatgg 42620688  T
Q  281 aaaatgcgaaaa 292  Q
    ||||| ||||||    
T  42620687 aaaatacgaaaa 42620676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 1344897 - 1344781
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatt 188  Q
    ||||||||||||||||||||||  | | || || |||||| |||||||||||  |||||||||||||||||||| |||||||||   ||||| |||||||    
T  1344897 catcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgtaaaatgtcaatcaatt 1344798  T
Q  189 tcgtccctccgtccaaa 205  Q
    | |||||||||||||||    
T  1344797 tagtccctccgtccaaa 1344781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 38596868 - 38596973
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||||||| |||||||||| || | ||||||||||||||| |||||   |||||||||||  ||||||||||||||||| || |||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtc 38596967  T
Q  181 catcaa 186  Q
    ||||||    
T  38596968 catcaa 38596973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 32090008 - 32089911
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | |||||| |||||||| |||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  32090008 catcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 32089911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 43318186 - 43318093
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgt 172  Q
    |||||| ||||||||| ||||||| |||||||||| || | ||||||| || |||| |||||   |||||||||||  ||||||||||||||||    
T  43318186 tcgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 17574476 - 17574540
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  17574476 tgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 17574540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 1343264 - 1343345
Alignment:
Q  124 aaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaa 205  Q
    |||||||||||  |||| ||| ||||||||||||||||  |||||||||   || || |||||||| |||||||||||||||    
T  1343264 aaattcgtcccttaatttaacaaaatatcaaaatagtctttgaatttgtaaaatatcaatcaatttagtccctccgtccaaa 1343345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 7268004 - 7268065
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| ||||||||||||||||||    
T  7268004 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 7268065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 18726573 - 18726670
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || ||  |||| |||||||| |||||   |||||||||||  |||||||| ||||||||  ||||| |||||    
T  18726573 catcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgttaaatgtcaatcaa 18726670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 33257843 - 33257746
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaa 186  Q
    |||||| |||||||||||||||||| || | |||||| ||||||||  ||||   |||||||||||  || ||||||||||||||  ||||| |||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 33257746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 38176647 - 38176724
Alignment:
Q  96 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 173  Q
    |||||||||||||||| | || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 38203871 - 38203948
Alignment:
Q  96 ttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 173  Q
    |||||||||||||||| | || |||||||||||||||||  ||||   |||||||||||  || ||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgtt 38203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 40330598 - 40330514
Alignment:
Q  89 catcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtt 173  Q
    |||||| |||||||||||||||| | || | ||||||| ||||||| |||||   |||||||||||  || ||||||||||||||    
T  40330598 catcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 40330514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 17574328 - 17574455
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||| ||||||| |||||||| |   || |||||||||||||||  ||||   ||||||||| |  ||||||||||||||    || |||||||||  |     
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 17574427  T
Q  191 gtccctccgtccaaaaggtccgttagtg 218  Q
    ||||||||||||||||| ||||||||||    
T  17574428 gtccctccgtccaaaagctccgttagtg 17574455  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 18728567 - 18728508
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||||| ||||||||||||| || ||||||||||| |||  ||||||||| |||||    
T  18728567 tgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttaagggactaatttgat 18728508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 29621842 - 29621771
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| |  |||||||||||||||| ||||||||    
T  29621842 cgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 29621771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 30468394 - 30468267
Alignment:
Q  91 tcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttc 190  Q
    |||||||||||| |||||||| |   ||||| |||||||||| | |||||   ||||||||| |  |||||| |||||||    || |||||||||  |     
T  30468394 tcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatg 30468295  T
Q  191 gtccctccgtccaaaaggtccgttagtg 218  Q
    ||||||||||||||||| ||||||||||    
T  30468294 gtccctccgtccaaaagctccgttagtg 30468267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 32087673 - 32087732
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||||||| ||||||| ||||| || ||||||||||| ||| |||||||||| |||||    
T  32087673 tgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 32087732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 35395333 - 35395456
Alignment:
Q  81 gagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtc 180  Q
    |||| ||||||||| ||| |||||||||||| |    | |||||| |||||||| |||||   |||||||||||  |||| |||||||||||| || |||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtc 35395432  T
Q  181 catcaatttcgtccctccgtccaa 204  Q
    ||||||    ||||||||||||||    
T  35395433 catcaaaaaggtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 35395494 - 35395549
Alignment:
Q  223 gtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgat 278  Q
    |||||| ||||||| ||||| || ||||||||||||||| |||||||||| |||||    
T  35395494 gtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggactaatttgat 35395549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 42473668 - 42473597
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||||||||||||||||||    || ||||||||| |  |||| ||||||||||| ||||||||    
T  42473668 cgaaatatcaaaatagtccctgaattttacagacgtccatcaaatcagtccttccgtccaaaatgtccgtta 42473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 6116946 - 6116868
Alignment:
Q  123 caaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtc 201  Q
    |||||| |||||||||||   ||||||| | ||||||||| |||||||||   ||||| ||||||||||||||| ||||    
T  6116946 caaatttgtcccccaatttgtcgaaatagccaaatagtccttgaatttgtcaaatgtcaatcaatttcgtcccttcgtc 6116868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 2854382 - 2854321
Alignment:
Q  150 atcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtcc 211  Q
    |||||| ||||||||||||||    || ||||| ||| ||||||||||||||||||||||||    
T  2854382 atcaaattagtccctgaattttacagacgtccaacaaattcgtccctccgtccaaaaggtcc 2854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 27349333 - 27349369
Alignment:
Q  247 aaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  27349333 aaggaagccacgtgtacaaggactaaattgatggaaa 27349369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 32835873 - 32835965
Alignment:
Q  78 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    ||||||| || |||||| |||||||||||||||| | || | || ||||||||||||  ||||   |||||||||||  || |||||||||||    
T  32835873 atcgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 42619286 - 42619394
Alignment:
Q  78 atcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaatttgtttgat 177  Q
    ||||||| || |||||| |||||||||||||||| | || | || ||| |||||||| |||||   |||||||||||  || |||| |||||||||  ||    
T  42619286 atcgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaat 42619385  T
Q  178 gtccatcaa 186  Q
    ||| |||||    
T  42619386 gtcaatcaa 42619394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 3357 - 3428
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||    
T  3357 cgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgtta 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 4529 - 4600
Alignment:
Q  144 cgaaatatcaaaatagtccctgaatttgtttgatgtccatcaatttcgtccctccgtccaaaaggtccgtta 215  Q
    |||||||||||| ||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||    
T  4529 cgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgtta 4600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 6760 - 6669
Alignment:
Q  79 tcgagtaaaccatcaatttcgtccctgaatttttagggattggccaaattcgtcccccaattgaacgaaatatcaaaatagtccctgaattt 170  Q
    |||||| |||||||||||| ||||||||||||| | || | ||||||||||||||| |||||    ||||||||||  || |||||||||||    
T  6760 tcgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 1421 - 1485
Alignment:
Q  219 tgctgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    |||||||||| ||||||||||||  || |||| | |||| |||||| ||||||||||||||||||    
T  1421 tgctgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgtacaaggactaaattgatggaaa 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 8422 - 8483
Alignment:
Q  222 tgtgttggcttgtacacgtgggaaaaaggaagccacatgtacagggactaaattgatggaaa 283  Q
    ||||||| ||||||||||||  || |||| |||||| |||||| | ||||||||||||||||    
T  8422 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaagtactaaattgatggaaa 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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