View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16595_high_7 (Length: 367)
Name: NF16595_high_7
Description: NF16595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16595_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 8 - 353
Target Start/End: Original strand, 41062781 - 41063126
Alignment:
| Q |
8 |
ataatactataatctatacaaataaataatttgttacttaagaaattaagaggtttaataatcaatatgttgactatgaagatgatgatgattctatcaa |
107 |
Q |
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| T |
41062781 |
ataatactataatctatacaaataaataatttgttacttaagaaattaagaggtttaataatcaatatgttgactatgaagatgatgatgattctatcaa |
41062880 |
T |
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| Q |
108 |
aagttcacatgatcttgagaaactggaacaatgaactgctgcttttggattggtaataaccatgcctttatttggtttatccaaatcatcattttcatgc |
207 |
Q |
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| T |
41062881 |
aagttcacatgatcttgagaaactggaacaatgaactgctgcttttggattggtaataaccatgcctttatttggtttatccaaatcatcattttcatgc |
41062980 |
T |
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| Q |
208 |
ctaatctctttgagcattgctgttacatctttcatcgtaggtctttcttctggtgatggattcacacagagaagagctacacctagcacttgaagcatct |
307 |
Q |
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| T |
41062981 |
ctaatctctttgagcattgctgttacatctttcatcgtaggtctttcttctggtgatggattcacacagagaagagctacacctagcacttgaagcatct |
41063080 |
T |
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| Q |
308 |
ctggtgtttttgttccacactgtaataataattgctgatcaataat |
353 |
Q |
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| T |
41063081 |
ctggtgtttttgttccacactgtaataataattgctgatcaataat |
41063126 |
T |
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