View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16596_high_18 (Length: 291)

Name: NF16596_high_18
Description: NF16596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16596_high_18
NF16596_high_18
[»] chr3 (48 HSPs)
chr3 (16-267)||(25876207-25876455)
chr3 (23-71)||(8113584-8113632)
chr3 (14-63)||(1149082-1149131)
chr3 (19-64)||(13992669-13992714)
chr3 (16-65)||(28595786-28595835)
chr3 (15-60)||(33490264-33490309)
chr3 (23-64)||(46469275-46469316)
chr3 (23-63)||(16980376-16980416)
chr3 (23-63)||(32632320-32632360)
chr3 (19-63)||(36483675-36483719)
chr3 (19-63)||(47377367-47377411)
chr3 (23-63)||(48376834-48376874)
chr3 (16-63)||(7868721-7868768)
chr3 (23-82)||(19468431-19468490)
chr3 (23-62)||(22843464-22843503)
chr3 (15-69)||(32951910-32951965)
chr3 (13-64)||(53207968-53208019)
chr3 (23-53)||(2662101-2662131)
chr3 (26-64)||(11969675-11969713)
chr3 (23-69)||(17588355-17588401)
chr3 (23-73)||(22462301-22462351)
chr3 (22-52)||(33937897-33937927)
chr3 (13-63)||(35191829-35191879)
chr3 (19-53)||(39822190-39822224)
chr3 (23-61)||(50570211-50570249)
chr3 (23-61)||(52119377-52119415)
chr3 (23-64)||(5702200-5702240)
chr3 (13-62)||(21513288-21513337)
chr3 (15-60)||(24428487-24428532)
chr3 (19-52)||(39869825-39869858)
chr3 (23-68)||(41258965-41259010)
chr3 (13-62)||(53996299-53996348)
chr3 (23-63)||(10498717-10498757)
chr3 (19-51)||(10513640-10513672)
chr3 (23-59)||(10926472-10926508)
chr3 (11-63)||(11574252-11574304)
chr3 (23-63)||(16792996-16793036)
chr3 (23-63)||(18870747-18870787)
chr3 (23-63)||(21245792-21245832)
chr3 (15-63)||(21967555-21967603)
chr3 (15-63)||(21989991-21990039)
chr3 (23-67)||(30200821-30200865)
chr3 (23-63)||(33223867-33223907)
chr3 (16-52)||(37376605-37376641)
chr3 (13-69)||(43334524-43334580)
chr3 (23-59)||(45254234-45254270)
chr3 (23-63)||(48315046-48315086)
chr3 (23-63)||(52904165-52904205)
[»] chr2 (44 HSPs)
chr2 (13-63)||(40896521-40896571)
chr2 (19-65)||(7413207-7413253)
chr2 (18-64)||(9459074-9459120)
chr2 (23-68)||(24593370-24593415)
chr2 (13-64)||(19179062-19179113)
chr2 (13-71)||(24393236-24393294)
chr2 (23-68)||(2429010-2429055)
chr2 (26-71)||(7052764-7052809)
chr2 (23-64)||(18231495-18231536)
chr2 (23-76)||(37320539-37320592)
chr2 (23-63)||(7206124-7206164)
chr2 (23-63)||(22608526-22608566)
chr2 (19-63)||(27934875-27934919)
chr2 (19-63)||(30243249-30243293)
chr2 (23-70)||(12124537-12124584)
chr2 (23-62)||(13000685-13000724)
chr2 (23-62)||(20120743-20120782)
chr2 (23-62)||(24520661-24520700)
chr2 (16-51)||(34444064-34444099)
chr2 (13-63)||(17142829-17142879)
chr2 (23-61)||(26400752-26400790)
chr2 (18-52)||(39088816-39088850)
chr2 (23-61)||(40099405-40099443)
chr2 (13-63)||(43117202-43117252)
chr2 (22-63)||(2661069-2661110)
chr2 (13-74)||(4122025-4122086)
chr2 (14-59)||(7350549-7350594)
chr2 (23-64)||(10156015-10156056)
chr2 (23-64)||(12124682-12124723)
chr2 (18-63)||(13922649-13922694)
chr2 (23-72)||(18324916-18324965)
chr2 (23-64)||(24548009-24548050)
chr2 (23-64)||(28771580-28771621)
chr2 (23-64)||(44926423-44926464)
chr2 (23-63)||(5676738-5676778)
chr2 (23-63)||(9383231-9383271)
chr2 (23-63)||(10332297-10332337)
chr2 (23-63)||(20565097-20565137)
chr2 (23-63)||(27412858-27412898)
chr2 (19-63)||(30089048-30089092)
chr2 (19-63)||(30125652-30125696)
chr2 (27-71)||(35429634-35429678)
chr2 (23-63)||(39068730-39068770)
chr2 (23-63)||(44496722-44496762)
[»] chr8 (24 HSPs)
chr8 (13-66)||(1244717-1244770)
chr8 (11-63)||(17704012-17704064)
chr8 (13-64)||(19488298-19488349)
chr8 (23-69)||(19778058-19778104)
chr8 (13-62)||(30623293-30623342)
chr8 (23-63)||(13286130-13286170)
chr8 (23-63)||(37015858-37015898)
chr8 (23-63)||(44293574-44293614)
chr8 (23-62)||(8910003-8910042)
chr8 (22-64)||(3889888-3889930)
chr8 (19-53)||(5179802-5179836)
chr8 (13-63)||(32223891-32223941)
chr8 (23-69)||(32878654-32878700)
chr8 (18-63)||(38204424-38204470)
chr8 (13-63)||(39821883-39821933)
chr8 (15-63)||(8999905-8999954)
chr8 (23-64)||(13477898-13477939)
chr8 (14-50)||(9019577-9019613)
chr8 (23-63)||(11708985-11709025)
chr8 (23-63)||(23816789-23816829)
chr8 (23-63)||(27587220-27587260)
chr8 (23-63)||(27750926-27750966)
chr8 (19-63)||(33445569-33445613)
chr8 (15-63)||(36781407-36781455)
[»] chr7 (42 HSPs)
chr7 (19-71)||(20103472-20103524)
chr7 (16-63)||(32263006-32263053)
chr7 (23-69)||(2618672-2618718)
chr7 (23-69)||(4340120-4340166)
chr7 (22-63)||(1398418-1398459)
chr7 (19-68)||(2391001-2391050)
chr7 (13-62)||(21050234-21050283)
chr7 (19-63)||(5352328-5352372)
chr7 (15-63)||(8237646-8237694)
chr7 (23-63)||(8683069-8683109)
chr7 (23-71)||(24991772-24991820)
chr7 (23-63)||(36803837-36803877)
chr7 (19-63)||(48980486-48980530)
chr7 (23-62)||(8615023-8615062)
chr7 (22-69)||(25251503-25251550)
chr7 (25-68)||(30033808-30033851)
chr7 (23-62)||(46987086-46987125)
chr7 (13-64)||(48007559-48007610)
chr7 (23-69)||(4346654-4346700)
chr7 (13-63)||(7872760-7872810)
chr7 (19-69)||(20149711-20149761)
chr7 (22-63)||(5526724-5526765)
chr7 (23-72)||(27544947-27544996)
chr7 (26-63)||(28703507-28703544)
chr7 (18-63)||(29166294-29166339)
chr7 (13-62)||(30296333-30296382)
chr7 (23-64)||(32566063-32566104)
chr7 (20-61)||(37240097-37240138)
chr7 (13-62)||(37864425-37864474)
chr7 (23-64)||(41029270-41029311)
chr7 (14-63)||(42435411-42435460)
chr7 (23-63)||(8879769-8879809)
chr7 (23-63)||(10244726-10244766)
chr7 (23-63)||(13044164-13044204)
chr7 (23-59)||(18714451-18714487)
chr7 (23-63)||(25246770-25246810)
chr7 (23-63)||(28012636-28012676)
chr7 (23-63)||(37624542-37624582)
chr7 (23-63)||(37930043-37930083)
chr7 (23-63)||(39801705-39801745)
chr7 (23-63)||(39926560-39926600)
chr7 (23-63)||(40762229-40762269)
[»] chr6 (27 HSPs)
chr6 (23-70)||(6470638-6470685)
chr6 (19-62)||(26522472-26522515)
chr6 (23-65)||(4450259-4450301)
chr6 (13-63)||(8810639-8810689)
chr6 (15-64)||(17829322-17829371)
chr6 (13-69)||(2262193-2262249)
chr6 (13-60)||(334142-334189)
chr6 (23-70)||(5679430-5679477)
chr6 (23-70)||(8381216-8381263)
chr6 (20-51)||(34845585-34845616)
chr6 (13-63)||(20744137-20744187)
chr6 (19-53)||(26521133-26521167)
chr6 (23-65)||(28046200-28046242)
chr6 (23-64)||(20568313-20568354)
chr6 (23-63)||(331908-331948)
chr6 (23-63)||(788865-788905)
chr6 (16-52)||(4801859-4801895)
chr6 (23-63)||(5040855-5040895)
chr6 (23-63)||(7083014-7083054)
chr6 (23-63)||(10780129-10780169)
chr6 (13-53)||(14918312-14918352)
chr6 (26-62)||(18254126-18254162)
chr6 (23-63)||(18256882-18256922)
chr6 (23-63)||(30370172-30370212)
chr6 (23-63)||(32053787-32053827)
chr6 (13-69)||(32149131-32149187)
chr6 (23-71)||(33824872-33824920)
[»] chr5 (44 HSPs)
chr5 (16-71)||(26400227-26400282)
chr5 (23-74)||(31308665-31308716)
chr5 (23-68)||(26409247-26409292)
chr5 (23-64)||(27679496-27679537)
chr5 (14-70)||(1669593-1669649)
chr5 (13-53)||(5846038-5846078)
chr5 (23-63)||(16133087-16133127)
chr5 (23-63)||(19248478-19248518)
chr5 (23-63)||(36321516-36321556)
chr5 (13-64)||(6898019-6898070)
chr5 (23-62)||(9123867-9123906)
chr5 (23-62)||(17239403-17239442)
chr5 (18-53)||(37339777-37339812)
chr5 (13-51)||(2001991-2002029)
chr5 (23-65)||(3955543-3955585)
chr5 (13-63)||(6489006-6489056)
chr5 (16-62)||(20114705-20114751)
chr5 (13-63)||(27721687-27721737)
chr5 (26-64)||(28604443-28604481)
chr5 (23-69)||(34206220-34206266)
chr5 (23-69)||(38353767-38353813)
chr5 (23-64)||(43135215-43135257)
chr5 (22-63)||(10199018-10199059)
chr5 (19-52)||(13484554-13484587)
chr5 (14-63)||(15889410-15889459)
chr5 (23-68)||(16531297-16531342)
chr5 (23-64)||(17338725-17338766)
chr5 (13-62)||(18489088-18489137)
chr5 (13-62)||(22498942-22498991)
chr5 (13-62)||(26223337-26223386)
chr5 (23-64)||(34702488-34702529)
chr5 (27-63)||(3445273-3445309)
chr5 (23-63)||(5485185-5485225)
chr5 (23-63)||(11844460-11844500)
chr5 (19-63)||(20175724-20175768)
chr5 (19-63)||(20370148-20370192)
chr5 (19-63)||(27174826-27174870)
chr5 (11-63)||(29178446-29178498)
chr5 (23-63)||(30893932-30893972)
chr5 (23-63)||(34436850-34436890)
chr5 (23-63)||(35109399-35109439)
chr5 (23-63)||(37614449-37614489)
chr5 (23-63)||(37932329-37932369)
chr5 (15-62)||(40541095-40541143)
[»] chr4 (42 HSPs)
chr4 (13-64)||(24785474-24785525)
chr4 (13-64)||(24822741-24822792)
chr4 (13-63)||(32180829-32180879)
chr4 (13-71)||(56497620-56497678)
chr4 (20-61)||(10519136-10519177)
chr4 (22-63)||(14136090-14136131)
chr4 (23-68)||(22279542-22279587)
chr4 (23-63)||(7230279-7230319)
chr4 (23-63)||(7922272-7922312)
chr4 (15-63)||(14577521-14577569)
chr4 (23-63)||(21317360-21317400)
chr4 (16-52)||(46409496-46409532)
chr4 (23-63)||(54500568-54500608)
chr4 (13-64)||(10006338-10006389)
chr4 (13-64)||(18635528-18635579)
chr4 (23-70)||(29908048-29908095)
chr4 (13-63)||(2186345-2186395)
chr4 (15-61)||(4727143-4727189)
chr4 (23-69)||(18915068-18915114)
chr4 (23-69)||(21266904-21266950)
chr4 (23-61)||(46676520-46676558)
chr4 (13-63)||(52270042-52270092)
chr4 (19-68)||(52869027-52869077)
chr4 (13-62)||(6087747-6087796)
chr4 (26-71)||(16996453-16996498)
chr4 (19-52)||(24488432-24488465)
chr4 (23-64)||(42316846-42316887)
chr4 (23-63)||(10303533-10303573)
chr4 (13-61)||(11286793-11286841)
chr4 (23-63)||(12322672-12322712)
chr4 (13-65)||(19124634-19124686)
chr4 (23-63)||(20799416-20799456)
chr4 (23-67)||(28311471-28311515)
chr4 (23-63)||(36203235-36203275)
chr4 (23-63)||(37692909-37692949)
chr4 (19-63)||(39678563-39678607)
chr4 (13-53)||(43782317-43782357)
chr4 (16-52)||(44909834-44909870)
chr4 (15-63)||(48955291-48955339)
chr4 (23-63)||(49473644-49473684)
chr4 (13-53)||(49949343-49949383)
chr4 (23-63)||(50362161-50362201)
[»] scaffold0896 (1 HSPs)
scaffold0896 (13-63)||(3140-3190)
[»] scaffold0117 (1 HSPs)
scaffold0117 (23-69)||(18286-18332)
[»] chr1 (41 HSPs)
chr1 (23-64)||(17283949-17283990)
chr1 (24-65)||(23228518-23228559)
chr1 (23-64)||(38448888-38448929)
chr1 (24-69)||(47528470-47528515)
chr1 (23-67)||(3136710-3136754)
chr1 (23-63)||(7925363-7925403)
chr1 (15-63)||(18166601-18166649)
chr1 (23-71)||(24124852-24124900)
chr1 (23-63)||(34733399-34733439)
chr1 (23-63)||(36371062-36371102)
chr1 (23-63)||(52441533-52441573)
chr1 (29-68)||(16997293-16997332)
chr1 (23-62)||(41926822-41926861)
chr1 (23-70)||(45140028-45140075)
chr1 (23-69)||(5907792-5907838)
chr1 (13-71)||(6809811-6809869)
chr1 (23-69)||(19620569-19620615)
chr1 (13-63)||(42045384-42045434)
chr1 (22-63)||(7484715-7484756)
chr1 (19-52)||(15764042-15764075)
chr1 (15-52)||(17643330-17643367)
chr1 (14-63)||(21400036-21400085)
chr1 (13-62)||(28039872-28039921)
chr1 (23-64)||(41677612-41677653)
chr1 (16-52)||(1408445-1408481)
chr1 (13-69)||(10132456-10132512)
chr1 (23-71)||(10292927-10292975)
chr1 (16-64)||(14520942-14520990)
chr1 (23-71)||(15595719-15595767)
chr1 (23-63)||(15729429-15729469)
chr1 (23-63)||(17139539-17139579)
chr1 (13-53)||(24236630-24236670)
chr1 (15-63)||(26803465-26803513)
chr1 (13-61)||(27127225-27127273)
chr1 (23-63)||(31890771-31890811)
chr1 (15-51)||(32864303-32864339)
chr1 (23-63)||(34632168-34632208)
chr1 (13-61)||(40227830-40227878)
chr1 (23-63)||(49875621-49875661)
chr1 (23-59)||(50638938-50638974)
chr1 (23-63)||(50849095-50849135)
[»] scaffold0197 (1 HSPs)
scaffold0197 (19-63)||(21773-21817)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-63)||(239806-239854)
[»] scaffold0238 (1 HSPs)
scaffold0238 (23-64)||(25387-25428)
[»] scaffold0044 (1 HSPs)
scaffold0044 (13-62)||(42346-42395)
[»] scaffold0004 (1 HSPs)
scaffold0004 (23-68)||(91584-91629)
[»] scaffold0126 (1 HSPs)
scaffold0126 (23-63)||(34910-34950)
[»] scaffold0118 (1 HSPs)
scaffold0118 (23-63)||(39997-40037)
[»] scaffold0098 (1 HSPs)
scaffold0098 (23-63)||(5424-5464)


Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 25876455 - 25876207
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaagtaatatatataatctattcactataaaaacatttttcatatat 115  Q
    |||||| ||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25876455 actttgcatacattatgcattgtccttaccaactgaacaaaactcacggagacaaagtaatatatataatctattcactataaaaacatttttcatatat 25876356  T
Q  116 cattgacaataaattttacatgtataaaatatttctcatatatccctcacatttccttttccatcccttattttaaacacaatgtaagagctccattgcc 215  Q
    |||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25876355 cattgacaatgaattttacatataaaaaatatttctcatatatccctcacatttccttttccatcccttattttaaacacaatgtaagagctccattgcc 25876256  T
Q  216 ttgagttgacctatatataataatcttatgatgatagagattagagaggcaa 267  Q
    || |||||||||||||||||||||||||   |||||||||||||||||||||    
T  25876255 ttaagttgacctatatataataatctta---tgatagagattagagaggcaa 25876207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 8113584 - 8113632
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  8113584 atatattatgcattgtccttaccaactgagctaagctcacggaaacaaa 8113632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 1149082 - 1149131
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| ||| ||||||||||||||||| ||||||||||||| |||||||||    
T  1149082 agaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 1149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13992714 - 13992669
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||    
T  13992714 ttgtatatattatgcattgtccttaccaactgagctaagcacacgg 13992669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 28595835 - 28595786
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    |||||||||||||||||||||||||||||||| ||||  ||| |||||||    
T  28595835 actttgtatatattatgcattgtctttaccaattgagttaagttcacgga 28595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 33490309 - 33490264
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctc 60  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  33490309 gactttgtatatattatgcatcgtccttaccaactgagctaagctc 33490264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 46469316 - 46469275
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  46469316 atatattatgcattgtccttaccaactgagctaagctcacgg 46469275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 16980376 - 16980416
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  16980376 atatattatgcattgtccttaccaactgagctaagctcacg 16980416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 32632360 - 32632320
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  32632360 atatattatgcattgtttataccaactgagcaaagctcacg 32632320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 36483719 - 36483675
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||  | ||||||||||||||||||||    
T  36483719 ttgtatatattatgcattgtccctgccaactgagcaaagctcacg 36483675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 47377367 - 47377411
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||    
T  47377367 ttgtatatattatgcattgtccttaccaactgagttaagctcacg 47377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 48376874 - 48376834
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| |||||||||||||||| |||||||||    
T  48376874 atatattatgcattatctttaccaactgagctaagctcacg 48376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 7868768 - 7868721
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||| ||||||||||||||||  ||||||||||||| |||||||||    
T  7868768 actttgcatatattatgcattgttcttaccaactgagctaagctcacg 7868721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 19468490 - 19468431
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaagtaatatatat 82  Q
    |||||||||||||||||  |||||||||||  ||||||||  |||||||| |||||||||    
T  19468490 atatattatgcattgtccataccaactgagttaagctcacaaagacaaagaaatatatat 19468431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 22843503 - 22843464
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  22843503 atatattatgcattgtctttactaactgagctaagctcac 22843464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 32951965 - 32951910
Alignment:
Q  15 gactttgtatatatt-atgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||| ||||||| ||||||| |||||||||||||||| ||||||||| |||||    
T  32951965 gactttgcatatatttatgcattatctttaccaactgagctaagctcacgcagaca 32951910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 53208019 - 53207968
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||| ||||||||||||||| | ||||||||||||| ||||||||||    
T  53208019 cagaccttgcatatattatgcattgcccttaccaactgagctaagctcacgg 53207968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 2662131 - 2662101
Alignment:
Q  23 atatattatgcattgtctttaccaactgagc 53  Q
    |||||||||||||||||||||||||||||||    
T  2662131 atatattatgcattgtctttaccaactgagc 2662101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 11969675 - 11969713
Alignment:
Q  26 tattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  11969675 tattatgcattttccttaccaactgagcaaagctcacgg 11969713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 17588401 - 17588355
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| ||||||||||||  |||||||||| ||||    
T  17588401 atatattatgcattgtccttaccaactgagttaagctcacggggaca 17588355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 22462351 - 22462301
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaagt 73  Q
    ||||||||||||||||| ||| ||||||||  |||||||||| ||||||||    
T  22462351 atatattatgcattgtccttatcaactgagttaagctcacggggacaaagt 22462301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Original strand, 33937897 - 33937927
Alignment:
Q  22 tatatattatgcattgtctttaccaactgag 52  Q
    |||||||||||||||||||||||||||||||    
T  33937897 tatatattatgcattgtctttaccaactgag 33937927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 35191829 - 35191879
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| |||| ||||    
T  35191829 cagaccttgcatatattatgcattgtccttaccaactgagctaagcgcacg 35191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 39822190 - 39822224
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||||||||||||||||||| |||||||||||||    
T  39822190 ttgtatatattatgcattgtccttaccaactgagc 39822224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 50570211 - 50570249
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctca 61  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  50570211 atatattatgcattgtctataccaactgagctaagctca 50570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 52119415 - 52119377
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  52119415 atatattatgcattgtccttaccaactgagctaagctca 52119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 5702200 - 5702240
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  5702200 atatattatgcattgtctt-accaactgagctaagctcacgg 5702240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 21513337 - 21513288
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||| ||||||||    
T  21513337 cagaccttgcataaattatgcattgtccttaccaactgagctaagctcac 21513288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 24428487 - 24428532
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctc 60  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||||    
T  24428487 gactttgcatatattatgcattgtccataccaactgagctaagctc 24428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 39869825 - 39869858
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgag 52  Q
    ||||||||||||||||||||| ||||||||||||    
T  39869825 ttgtatatattatgcattgtccttaccaactgag 39869858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 41259010 - 41258965
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||||| ||||||||| | | ||||||||||||||    
T  41259010 atatattatgcattgtccttaccaactaaactaagctcacggagac 41258965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 53996348 - 53996299
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| |||||||||||||||||  |||||||||||| ||||||||    
T  53996348 cagaccttgcatatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 10498717 - 10498757
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  10498717 atatattatgcattgtccataccaactgagctaagctcacg 10498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10513672 - 10513640
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactga 51  Q
    ||||||||||||||||||||| |||||||||||    
T  10513672 ttgtatatattatgcattgtccttaccaactga 10513640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 10926508 - 10926472
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagct 59  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  10926508 atatattatgcattgtccttaccaactgagctaagct 10926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 11574304 - 11574252
Alignment:
Q  11 cacagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||||||||||||| || ||| ||||||||  |||||||||    
T  11574304 cacagaccttgtatatattatgcattatccttatcaactgagttaagctcacg 11574252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 16792996 - 16793036
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| ||||||||| || |||||||||    
T  16792996 atatattatgcattgtctataccaactgtgctaagctcacg 16793036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 18870747 - 18870787
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  18870747 atatattatgcattgtccctaccaactgagctaagctcacg 18870787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 21245832 - 21245792
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||| ||| |||||||||    
T  21245832 atatattatgcattgtccttaccaactaagctaagctcacg 21245792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 21967603 - 21967555
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| ||||||||| ||||||| ||||||||||||  |||||||||    
T  21967603 gactttgcatatattatacattgtccttaccaactgagttaagctcacg 21967555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 21990039 - 21989991
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| ||||||||| ||||||| ||||||||||||  |||||||||    
T  21990039 gactttgcatatattatacattgtccttaccaactgagttaagctcacg 21989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 30200865 - 30200821
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggaga 67  Q
    ||||||||||||||||| ||| ||||||||| |||||||| ||||    
T  30200865 atatattatgcattgtccttagcaactgagctaagctcacagaga 30200821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 33223907 - 33223867
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||| | |||||||||||| |||||||||    
T  33223907 atatattatgcattgtttctaccaactgagctaagctcacg 33223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 37376605 - 37376641
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgag 52  Q
    |||||||||||||||||||||||| |||| |||||||    
T  37376605 actttgtatatattatgcattgtccttactaactgag 37376641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 43334524 - 43334580
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||| ||||||||||||||||| ||| |||||| |||||  ||||||||| |||||    
T  43334524 cagaccttgtatatattatgcatggtccttaccagctgagttaagctcacgaagaca 43334580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 45254270 - 45254234
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagct 59  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  45254270 atatattatgcattgtccttaccaactgagctaagct 45254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 48315046 - 48315086
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| || ||||||||||||| |||||||||    
T  48315046 atatattatgcattatccttaccaactgagctaagctcacg 48315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 52904165 - 52904205
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  52904165 atatattatgcattgtccttaccaactgagctaacctcacg 52904205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 40896521 - 40896571
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  40896521 cagactttgtatatattatgcattgtctataccaactgagctaagctcacg 40896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 7413207 - 7413253
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  7413207 ttgtatatattatgcattgtccttaccaactgagctaagctcacgga 7413253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 9459074 - 9459120
Alignment:
Q  18 tttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  9459074 tttgtatatattatgcattgtctttatcaactgagctaagctcacgg 9459120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 24593415 - 24593370
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  24593415 atatattatgcattgtccttaccaactgagctaagctcacggagac 24593370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 19179062 - 19179113
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  19179062 cagaccttgcatatattatgcattgtccttaccaactgagctaagctcacgg 19179113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 24393294 - 24393236
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||| ||| ||||||||||||||||| ||| ||||||||| |||||||||| ||||||    
T  24393294 cagaccttgcatatattatgcattgtccttaacaactgagctaagctcacggggacaaa 24393236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 2429055 - 2429010
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||    
T  2429055 atatattatgcattgtccttaccaactgaactaagctcacggagac 2429010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 7052809 - 7052764
Alignment:
Q  26 tattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  7052809 tattatgcattgtccttaccaactgagctaagctcacggggacaaa 7052764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 18231495 - 18231536
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  18231495 atatattatgcattgtccttaccaactgagctaagctcacgg 18231536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 37320539 - 37320592
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaagtaat 76  Q
    ||||||||||||||||||||||||||||||  |||||||||  |||||| ||||    
T  37320539 atatattatgcattgtctttaccaactgagttaagctcacgtggacaaactaat 37320592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 7206164 - 7206124
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  7206164 atatattatgcattgtctctaccaactgagctaagctcacg 7206124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 22608566 - 22608526
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  22608566 atatattatgcattgtctctaccaactgagctaagctcacg 22608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 27934875 - 27934919
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||    
T  27934875 ttgtatatattatgtattgtccttaccaactgagctaagctcacg 27934919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 30243293 - 30243249
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||    
T  30243293 ttgtatatattatgcattgtctctaccaactgagctaagttcacg 30243249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 12124584 - 12124537
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    ||||||||||||||||| ||||||||||||| || ||||||| |||||    
T  12124584 atatattatgcattgtccttaccaactgagctaaactcacggggacaa 12124537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 13000724 - 13000685
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  13000724 atatattatgcattatctttaccaactgagctaagctcac 13000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 20120743 - 20120782
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  20120743 atatattatgcattgtccttaccaactgagctaagctcac 20120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 24520661 - 24520700
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  24520661 atatattatgcattgtctttaccaactaagctaagctcac 24520700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 34444099 - 34444064
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactga 51  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34444099 actttgtatatattatgcattgtctataccaactga 34444064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 17142879 - 17142829
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||| ||||||||| |||||||  |||||||||||| |||||||||    
T  17142879 cagactttgcatatattatacattgtcactaccaactgagctaagctcacg 17142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 26400790 - 26400752
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  26400790 atatattatgcattgtccttaccaactgagtaaagctca 26400752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 39088816 - 39088850
Alignment:
Q  18 tttgtatatattatgcattgtctttaccaactgag 52  Q
    |||| ||||||||||||||||||||||||||||||    
T  39088816 tttgcatatattatgcattgtctttaccaactgag 39088850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 40099405 - 40099443
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  40099405 atatattatgcattgtccttaccaactgagctaagctca 40099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 43117202 - 43117252
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| || ||||||    
T  43117202 cagaccttgcatatattatgcattgtccttaccaactgagctaaactcacg 43117252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 2661069 - 2661110
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| ||||||||||||  |||||||||    
T  2661069 tatatattatgcattgtccttaccaactgagttaagctcacg 2661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 4122025 - 4122086
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaagta 74  Q
    ||||| ||| |||||||||||||||||  ||||| |||||| |||||||||  |||||||||    
T  4122025 cagaccttgcatatattatgcattgtccataccagctgagctaagctcacgaggacaaagta 4122086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 7350594 - 7350549
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactgagcaaagct 59  Q
    |||||||| |||||||||||||||||  |||||||||||| |||||    
T  7350594 agactttgcatatattatgcattgtccataccaactgagctaagct 7350549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 10156056 - 10156015
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||| |||||| ||||||||||||| ||||||||||    
T  10156056 atatattatgtattgtccttaccaactgagctaagctcacgg 10156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 12124723 - 12124682
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||    
T  12124723 atatattatgcattgtccttaccaactgagctaagctgacgg 12124682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 13922649 - 13922694
Alignment:
Q  18 tttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||||||  |||||||||||  |||||||||    
T  13922649 tttgtatatattatgcattgtccctaccaactgagttaagctcacg 13922694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 18324916 - 18324965
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaag 72  Q
    ||||||||||||||||| ||||||||||||  ||||||||  ||||||||    
T  18324916 atatattatgcattgtccttaccaactgagttaagctcacatagacaaag 18324965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 24548050 - 24548009
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||| |||||| ||||||||||||| ||||||||||    
T  24548050 atatattatggattgtccttaccaactgagctaagctcacgg 24548009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 28771621 - 28771580
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||| || |||||||    
T  28771621 atatattatgcattgtccttaccaactgagctaaactcacgg 28771580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 44926423 - 44926464
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||| |||||||||||||||||||||||  ||||||||||    
T  44926423 atatataatgcattgtctttaccaactgagataagctcacgg 44926464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 5676778 - 5676738
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  5676778 atatattatgcattgtcattaccaactgagttaagctcacg 5676738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 9383231 - 9383271
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  9383231 atatattatgcattgtccataccaactgagctaagctcacg 9383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 10332297 - 10332337
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  10332297 atatattatgcattgtccttatcaactgagctaagctcacg 10332337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 20565097 - 20565137
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  20565097 atatattatgcattgtccctaccaactgagctaagctcacg 20565137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 27412858 - 27412898
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  27412858 atatattatgcattgtctctaccaactgagttaagctcacg 27412898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 30089092 - 30089048
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||  |||||||||||| ||| |||||    
T  30089092 ttgtatatattatgcattgtccctaccaactgagctaagttcacg 30089048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 30125696 - 30125652
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||  |||||||||||| ||| |||||    
T  30125696 ttgtatatattatgcattgtccctaccaactgagctaagttcacg 30125652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 35429634 - 35429678
Alignment:
Q  27 attatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    |||||||| ||||| |||||||||||| |||||||||| ||||||    
T  35429634 attatgcaatgtctctaccaactgagctaagctcacggggacaaa 35429678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 39068730 - 39068770
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  39068730 atatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 44496722 - 44496762
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||| |||||| ||||||||||||| |||||||||    
T  44496722 atatattatgtattgtccttaccaactgagctaagctcacg 44496762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 1244717 - 1244770
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggag 66  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  1244717 cagaccttgtatatattatgcattgtccttaccaactgagctaagttcacggag 1244770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17704064 - 17704012
Alignment:
Q  11 cacagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||    
T  17704064 cacagaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 17704012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 19488349 - 19488298
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  19488349 cagaccttgtatatattatgcattgtccttaccaactgagctatgctcacgg 19488298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 19778104 - 19778058
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  19778104 atatattatgcattgtccttaccaactgagctaagctcacggggaca 19778058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 30623342 - 30623293
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| ||||||||    
T  30623342 cagaccttgcatatattatgcattgtccttaccaactgagctaagctcac 30623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 13286170 - 13286130
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  13286170 atatattatgcattgtctataccaactgagctaagctcacg 13286130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 37015858 - 37015898
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  37015858 atatattatgcattgtctctaccaactgagctaagctcacg 37015898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 44293614 - 44293574
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  44293614 atatattatgcattgtctataccaactgagctaagctcacg 44293574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 8910003 - 8910042
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  8910003 atatattatgcattgtccttaccaactgagctaagctcac 8910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 3889930 - 3889888
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||    
T  3889930 tatatattatgcattgtctttaccaactaagctaagttcacgg 3889888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 5179836 - 5179802
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||||||||||||||||||| |||||||||||||    
T  5179836 ttgtatatattatgcattgtccttaccaactgagc 5179802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 32223891 - 32223941
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||| |||||||||||||||||| || ||||||| | |||||||||    
T  32223891 cagactttgcatatattatgcattgtctctatcaactgaactaagctcacg 32223941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 32878700 - 32878654
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||  ||||||||||||| |||||||||| ||||    
T  32878700 atatattatgcattgttcttaccaactgagctaagctcacggggaca 32878654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 38204424 - 38204470
Alignment:
Q  18 tttgtatatatta-tgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||||    
T  38204424 tttggatatattaatgcattgtctttaccaactgagctaagctcacg 38204470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 39821933 - 39821883
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  39821933 cagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 39821883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 8999905 - 8999954
Alignment:
Q  15 gactttgtatatattatgcatt-gtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||||||||| |||| |||||||||||| |||||||||    
T  8999905 gactttgcatatattatgcatttgtctctaccaactgagctaagctcacg 8999954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 13477939 - 13477898
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||    
T  13477939 atatattatgcattgtccttaccaactcagctaagctcacgg 13477898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 9019577 - 9019613
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactg 50  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  9019577 agaccttgcatatattatgcattgtctttaccaactg 9019613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 11709025 - 11708985
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  11709025 atatattatgcattgtccctaccaactgagctaagctcacg 11708985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 23816829 - 23816789
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| || ||||||||||||| |||||||||    
T  23816829 atatattatgcattatccttaccaactgagctaagctcacg 23816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 27587260 - 27587220
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||| |||||||||| ||||||||||||| |||||||||    
T  27587260 atatatcatgcattgtccttaccaactgagctaagctcacg 27587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 27750926 - 27750966
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||| |||| ||||||||||||| |||||||||    
T  27750926 atatattatgcactgtccttaccaactgagctaagctcacg 27750966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 33445613 - 33445569
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||||   |||||||||||| |||||||||    
T  33445613 ttgtatatattatgcattgttcctaccaactgagctaagctcacg 33445569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 36781455 - 36781407
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||||| |||||| ||||||||||||| | |||||||    
T  36781455 gactttgcatatattatgtattgtccttaccaactgagctaggctcacg 36781407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 20103472 - 20103524
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||| ||||||||||||||| ||||||||||||  |||||||||||||||||    
T  20103472 ttgtaaatattatgcattgtccttaccaactgagttaagctcacggagacaaa 20103524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 32263053 - 32263006
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||| |||||||| |||||||||||| |||||||||    
T  32263053 actttgtatatattatacattgtctataccaactgagctaagctcacg 32263006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 2618718 - 2618672
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  2618718 atatattatgcattgtccttaccaactgagcgaagctcacggggaca 2618672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 4340166 - 4340120
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||||    
T  4340166 atatattatgcattgtccttaccaactgagctaatctcacggagaca 4340120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1398418 - 1398459
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  1398418 tatatattatgcattgtccttaccaactgagctaagctcacg 1398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 2391050 - 2391001
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||||||||||    
T  2391050 ttgtatatattatgcattgttcttaccaactgagctaagttcacggagac 2391001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 21050234 - 21050283
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| ||||||||    
T  21050234 cagaccttgcatatattatgcattgtccttaccaactgagctaagctcac 21050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 5352372 - 5352328
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||    
T  5352372 ttgtatatattatgtattgtccttaccaactgagctaagctcacg 5352328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 8237646 - 8237694
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||||||||| |||||||| || | |||||||||    
T  8237646 gactttgtatatattatgcattgtccttaccaacagaactaagctcacg 8237694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 8683109 - 8683069
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  8683109 atatattatgcattgtctataccaactgagctaagctcacg 8683069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 24991820 - 24991772
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||||||||||||||| ||||||||||||| |||||||| | ||||||    
T  24991820 atatattatgcattgtccttaccaactgagctaagctcacagggacaaa 24991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 36803877 - 36803837
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  36803877 atatattatgcattgtctctaccaactgagctaagctcacg 36803837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 48980530 - 48980486
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||  |||||||||||| |||||||||    
T  48980530 ttgtatatattatgcattgtccataccaactgagctaagctcacg 48980486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 8615062 - 8615023
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  8615062 atatattatgcattgtccttaccaactgagctaagctcac 8615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 25251550 - 25251503
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| | |||||||||||  |||||||||||||||    
T  25251550 tatatattatgcattgtttataccaactgagttaagctcacggagaca 25251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 30033851 - 30033808
Alignment:
Q  25 atattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||    
T  30033851 atattatgcattgttcttaccaactgagctaagctcacggagac 30033808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 46987125 - 46987086
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  46987125 atatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 48007559 - 48007610
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||| ||||||||||||||||| ||||||||||||  ||||||||||    
T  48007559 cagaccttgcatatattatgcattgtcattaccaactgagttaagctcacgg 48007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 4346700 - 4346654
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    |||||||||||||||||  |||||||||||| || ||||||||||||    
T  4346700 atatattatgcattgtccctaccaactgagctaatctcacggagaca 4346654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 7872760 - 7872810
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| ||| |||||    
T  7872760 cagaccttgcatatattatgcattgtccttaccaactgagctaagttcacg 7872810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 20149711 - 20149761
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    |||||||||||||| ||| || |||||||||| || |||||||||||||||    
T  20149711 ttgtatatattatgtattatccttaccaactgtgctaagctcacggagaca 20149761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 5526765 - 5526724
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  5526765 tatatattatgcattgtccataccaactgagctaagctcacg 5526724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 27544996 - 27544947
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaag 72  Q
    ||||||||| ||||||| ||||||||||||  |||||||||| |||||||    
T  27544996 atatattatacattgtccttaccaactgagataagctcacggggacaaag 27544947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 28703544 - 28703507
Alignment:
Q  26 tattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||||||||| || ||||||    
T  28703544 tattatgcattgtctttaccaactgagctaaactcacg 28703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 29166294 - 29166339
Alignment:
Q  18 tttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||| ||||||||||| |||||||||||| | |||||||||    
T  29166294 tttgtatattttatgcattgtttttaccaactgaactaagctcacg 29166339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 30296382 - 30296333
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||| ||||||| ||||||||||||| ||||||||    
T  30296382 cagaccttgcatatattatacattgtccttaccaactgagctaagctcac 30296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 32566063 - 32566104
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||| || |||||||||||||||||| ||||||||||    
T  32566063 atatattatacactgtctttaccaactgagctaagctcacgg 32566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37240097 - 37240138
Alignment:
Q  20 tgtatatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||| |||||||||||||||||  |||||||    
T  37240097 tgtatatattatgcaatgtctttaccaactgagttaagctca 37240138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 37864474 - 37864425
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||||||||||  ||||||||||||| ||||||||    
T  37864474 cagaccttgcatatattatgcattgtacttaccaactgagctaagctcac 37864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 41029311 - 41029270
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||    
T  41029311 atatattatacattgtccttaccaactgagctaagctcacgg 41029270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 42435411 - 42435460
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| ||| ||||||||||||| |||| |||||||||||| |||||||||    
T  42435411 agaccttgcatatattatgcatagtctctaccaactgagctaagctcacg 42435460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 8879769 - 8879809
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  8879769 atatattatgcattgtctataccaactgagttaagctcacg 8879809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 10244766 - 10244726
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  10244766 atatattatgcattgtccataccaactgagctaagctcacg 10244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 13044164 - 13044204
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| |||||||||||| ||||||||||||| |||||||||    
T  13044164 atattttatgcattgtccttaccaactgagctaagctcacg 13044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 18714487 - 18714451
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagct 59  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  18714487 atatattatgcattgtccttaccaactgagctaagct 18714451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 25246810 - 25246770
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||||| ||||||||| || ||||||    
T  25246810 atatattatgcattgtctttatcaactgagctaaactcacg 25246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 28012636 - 28012676
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  28012636 atatattatgcattgtccttaccaactgagttaagctcacg 28012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 37624582 - 37624542
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  37624582 atatattatgcattgtccataccaactgaggaaagctcacg 37624542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 37930083 - 37930043
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  37930083 atatattatgcattgtccttaccaactgagataagctcacg 37930043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 39801745 - 39801705
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  39801745 atatattatgcattgtccataccaactgagctaagctcacg 39801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 39926560 - 39926600
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  39926560 atatattatgcattgtccttatcaactgagctaagctcacg 39926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 40762229 - 40762269
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| |||||| |||||| |||||||||    
T  40762229 atatattatgcattgtccttaccatctgagctaagctcacg 40762269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 6470638 - 6470685
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  6470638 atatattatgcattgtctttatcaactgagttaagctcacggagacaa 6470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 26522515 - 26522472
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||    
T  26522515 ttgtatatattatgcattgtccttaccaactgagctaagctcac 26522472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 4450301 - 4450259
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    ||||||||||||||||||||| ||||||||| |||||||||||    
T  4450301 atatattatgcattgtctttatcaactgagctaagctcacgga 4450259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 8810689 - 8810639
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||| |||||||||||||||||||| |||||||||    
T  8810689 cagaccttgcatatattatgtattgtctttaccaactgagctaagctcacg 8810639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 17829322 - 17829371
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||| ||||||||||||| ||| ||||||||||||| ||||||||||    
T  17829322 gactttgcatatattatgcatagtccttaccaactgagctaagctcacgg 17829371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 2262193 - 2262249
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||| ||| ||| ||||||||||||||||||||| ||||| |||||||||| ||||    
T  2262193 cagaccttgcatacattatgcattgtctttaccaattgagccaagctcacggggaca 2262249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 334189 - 334142
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctc 60  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| ||||||    
T  334189 cagaccttgcatatattatgcattgtctttatcaactgagctaagctc 334142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 5679477 - 5679430
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||||||    
T  5679477 atatattatgcattgtctttactagctgagctaagttcacggagacaa 5679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 8381216 - 8381263
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    |||| |||||||||||||||||||||||||  |||||||||| |||||    
T  8381216 atatgttatgcattgtctttaccaactgagttaagctcacggggacaa 8381263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 34845616 - 34845585
Alignment:
Q  20 tgtatatattatgcattgtctttaccaactga 51  Q
    ||||||||||||||||||||||||||||||||    
T  34845616 tgtatatattatgcattgtctttaccaactga 34845585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 20744187 - 20744137
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  20744187 cagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 20744137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 26521133 - 26521167
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||||||||||||||||||| |||||||||||||    
T  26521133 ttgtatatattatgcattgtccttaccaactgagc 26521167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 28046200 - 28046242
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    ||||||||||||||||||||| ||||||| | |||||||||||    
T  28046200 atatattatgcattgtctttatcaactgaactaagctcacgga 28046242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 20568313 - 20568354
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  20568313 atatattatgcaatgtccttaccaactgagctaagctcacgg 20568354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 331908 - 331948
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  331908 atatattatgcattgtctctaccaactgagttaagctcacg 331948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 788905 - 788865
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  788905 atatattatgcattgtccttaccaactgagataagctcacg 788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 4801895 - 4801859
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgag 52  Q
    |||||||||||||||||||||||  ||||||||||||    
T  4801895 actttgtatatattatgcattgtacttaccaactgag 4801859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 5040855 - 5040895
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||  ||||||||||||||||||| |||||||||    
T  5040855 atatattatgttttgtctttaccaactgagctaagctcacg 5040895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 7083014 - 7083054
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  7083014 atatattatgcattgtccttaccaattgagctaagctcacg 7083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 10780129 - 10780169
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  10780129 atatattatgcattgtccctaccaactgagctaagctcacg 10780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 14918312 - 14918352
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||| |||||||||||||||||||||  ||||||||||||    
T  14918312 cagaccttgtatatattatgcattgtccctaccaactgagc 14918352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 18254126 - 18254162
Alignment:
Q  26 tattatgcattgtctttaccaactgagcaaagctcac 62  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  18254126 tattatgcattgtccttaccaactgagctaagctcac 18254162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 18256922 - 18256882
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  18256922 atatattatgcattgtccttatcaactgagctaagctcacg 18256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 30370172 - 30370212
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| |||||||||||||| | |||||||||    
T  30370172 atatattatgcattatctttaccaactgaactaagctcacg 30370212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 32053827 - 32053787
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  32053827 atatattatgcattgtccataccaactgagctaagctcacg 32053787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 32149187 - 32149131
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||| ||| ||||||||||||||||  ||||||||||||| ||||| || ||||||    
T  32149187 cagaccttgcatatattatgcattgttcttaccaactgagctaagcttacagagaca 32149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 33824920 - 33824872
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||||||||||||||| ||| ||||||||| ||| ||||| |||||||    
T  33824920 atatattatgcattgtccttatcaactgagctaagatcacgaagacaaa 33824872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 26400227 - 26400282
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    |||||||||||| ||||||||||| ||||||| ||||| |||||||||| ||||||    
T  26400227 actttgtatatactatgcattgtccttaccaattgagctaagctcacggggacaaa 26400282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 31308665 - 31308716
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaagta 74  Q
    |||||||||  |||||||||||||||||||| |||||||||||||| |||||    
T  31308665 atatattatatattgtctttaccaactgagctaagctcacggagactaagta 31308716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 26409292 - 26409247
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||    
T  26409292 atatattatgcattgtccataccaactgagctaagctcacggagac 26409247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 27679537 - 27679496
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  27679537 atatattatgcattatctttaccaactgagctaagctcacgg 27679496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 1669593 - 1669649
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    |||||||| ||||||||||||||||  ||||||||||||| ||| |||||| |||||    
T  1669593 agactttgcatatattatgcattgttcttaccaactgagctaagttcacggggacaa 1669649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 5846078 - 5846038
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  5846078 cagactttgcatatattatgcattgtccttaccaactgagc 5846038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 16133087 - 16133127
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  16133087 atatattatgcattgtccttaccaactgagctaagctcacg 16133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 19248518 - 19248478
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  19248518 atatattatgcattgtctataccaactgagctaagctcacg 19248478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 36321516 - 36321556
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  36321516 atatattatgcattgtccttaccaactgagctaagctcacg 36321556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 6898070 - 6898019
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||| |||||||||||||| |||||||||||| ||  ||||||||||    
T  6898070 cagactttgcatatattatgcattatctttaccaactaagttaagctcacgg 6898019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 9123867 - 9123906
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  9123867 atatattatgcattgtctttaccaactgagttaagctcac 9123906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 17239403 - 17239442
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  17239403 atatattatgcattgtccataccaactgagcaaagctcac 17239442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 37339777 - 37339812
Alignment:
Q  18 tttgtatatattatgcattgtctttaccaactgagc 53  Q
    |||||||||||||||||||||||||| |||||||||    
T  37339777 tttgtatatattatgcattgtctttatcaactgagc 37339812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 2002029 - 2001991
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactga 51  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  2002029 cagaccttgtatatattatgcaatgtctttaccaactga 2001991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 3955585 - 3955543
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    ||||||||||||||||||||||||| ||| | |||||||||||    
T  3955585 atatattatgcattgtctttaccaattgaactaagctcacgga 3955543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 6489056 - 6489006
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  6489056 cagaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 6489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 20114751 - 20114705
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||| |||||||||||| ||||||||||||| ||| ||||    
T  20114751 actttgtatattttatgcattgtccttaccaactgagctaagttcac 20114705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 27721687 - 27721737
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||| ||||||||||||||||   |||||||||||| |||||||||    
T  27721687 cagactttgcatatattatgcattgttcctaccaactgagctaagctcacg 27721737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 28604443 - 28604481
Alignment:
Q  26 tattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||||||||||||||||||||| || |||||||    
T  28604443 tattatgcattgtctttaccaactgagctaaactcacgg 28604481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 34206266 - 34206220
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||||||||||||||||  || ||||||| ||||    
T  34206266 atatattatgcattgtctttaccaactgagttaaactcacggggaca 34206220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 38353813 - 38353767
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||| ||||| ||||||||||| | |||||||||||||||    
T  38353813 atatattatgcgttgtccttaccaactgaactaagctcacggagaca 38353767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 43135215 - 43135257
Alignment:
Q  23 atatattatgcattgtctttaccaactgagc-aaagctcacgg 64  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  43135215 atatattatgcattgtctttaccaattgagctaaagctcacgg 43135257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 10199059 - 10199018
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  10199059 tatatattatgcattgtccataccaactgagctaagctcacg 10199018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 13484554 - 13484587
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgag 52  Q
    ||||||||||||||||||||||| ||||||||||    
T  13484554 ttgtatatattatgcattgtcttcaccaactgag 13484587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 15889459 - 15889410
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  15889459 agaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 15889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 16531297 - 16531342
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||||| ||||||||||| | |||||||| |||||    
T  16531297 atatattatgcattgtccttaccaactgaaccaagctcacagagac 16531342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 17338725 - 17338766
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||| |||||||||||||| ||||| ||||||||||    
T  17338725 atatattatgtattgtctttaccaattgagctaagctcacgg 17338766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 18489088 - 18489137
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| |||||||||||||||||| |||||||||||| || |||||    
T  18489088 cagaccttgcatatattatgcattgtctataccaactgagctaaactcac 18489137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 22498991 - 22498942
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||||||||||| ||||||||||||  ||||||||    
T  22498991 cagaccttgcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 26223337 - 26223386
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    |||| ||||||||| ||||||||||||  |||||||||||| ||||||||    
T  26223337 cagattttgtatattttatgcattgtcaataccaactgagctaagctcac 26223386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 34702529 - 34702488
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  34702529 atatattatgcattgtccttaccaactgagttaagctcacgg 34702488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 3445273 - 3445309
Alignment:
Q  27 attatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  3445273 attatgcattgtccttaccaactgagctaagctcacg 3445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 5485225 - 5485185
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  5485225 atatattatgcattgtccctaccaactgagctaagctcacg 5485185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 11844460 - 11844500
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| ||| |||||    
T  11844460 atatattatgcattgtccttaccaactgagctaagttcacg 11844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 20175768 - 20175724
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||| |||||||  |||||||||||| |||||||||    
T  20175768 ttgtatatattatacattgtccataccaactgagctaagctcacg 20175724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 20370148 - 20370192
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| ||  |||||||||||| |||||||||    
T  20370148 ttgtatatattatgcattatccctaccaactgagctaagctcacg 20370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27174870 - 27174826
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||| |||||||||||| || |||||||||| |||||||||    
T  27174870 ttgtatattttatgcattgtccttgccaactgagctaagctcacg 27174826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 29178498 - 29178446
Alignment:
Q  11 cacagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||| ||||||||||||  |||||||||||  |||||||||    
T  29178498 cacagaccttgtatattttatgcattgtccataccaactgagttaagctcacg 29178446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 30893972 - 30893932
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||| |||||||  |||||||||    
T  30893972 atatattatgcattgtctttacaaactgagttaagctcacg 30893932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 34436890 - 34436850
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  34436890 atatattatgcattgtccctaccaactgagctaagctcacg 34436850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 35109439 - 35109399
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||| |||||||||||||||||||  |||||||||    
T  35109439 atatattatgtattgtctttaccaactgagttaagctcacg 35109399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 37614449 - 37614489
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||| |||||| |||||||||||| |||||||||    
T  37614449 atatattatgcgttgtctctaccaactgagctaagctcacg 37614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 37932369 - 37932329
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  37932369 atatattatgcattgtccataccaactgagctaagctcacg 37932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 40541143 - 40541095
Alignment:
Q  15 gactttgtatatattatgcattg-tctttaccaactgagcaaagctcac 62  Q
    ||||||| ||||||||||||||| || ||||||||||||| ||||||||    
T  40541143 gactttgcatatattatgcattgttccttaccaactgagctaagctcac 40541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 24785474 - 24785525
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||||||||||||||||||||| |||||||||||||  |||||||||    
T  24785474 cagaccttgtatatattatgcattgtccttaccaactgagcttagctcacgg 24785525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 24822792 - 24822741
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||||||||||||||||||||| |||||||||||||  |||||||||    
T  24822792 cagaccttgtatatattatgcattgtccttaccaactgagcttagctcacgg 24822741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 32180879 - 32180829
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||| |||| ||||||||||||| |||||||||||| |||||||||    
T  32180879 cagactttgcatattttatgcattgtctataccaactgagctaagctcacg 32180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 56497620 - 56497678
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||| ||| ||||||||||||||||| ||||||| ||||| |||||||||| ||||||    
T  56497620 cagaccttgcatatattatgcattgtccttaccaattgagctaagctcacggggacaaa 56497678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 10519177 - 10519136
Alignment:
Q  20 tgtatatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  10519177 tgtatatattatgcattgtctataccaactgagctaagctca 10519136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 14136131 - 14136090
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  14136131 tatatattatgcattgtctttatcaactgagctaagctcacg 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 22279542 - 22279587
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  22279542 atatattatgcattgtccttaccaactgagctaagctcatggagac 22279587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 7230319 - 7230279
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  7230319 atatattatgcattgtccttaccaactgagctaagctcacg 7230279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 7922272 - 7922312
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  7922272 atatattatgcattgtctttaccaactgagataagctcacg 7922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 14577521 - 14577569
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| ||||||||||||||||| ||||||||||||| || ||||||    
T  14577521 gactttgcatatattatgcattgtccttaccaactgagctaaactcacg 14577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 21317360 - 21317400
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  21317360 atatattatgcattgtctctaccaactgagctaagctcacg 21317400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 46409496 - 46409532
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgag 52  Q
    |||||| ||||||||||||||||||||||||||||||    
T  46409496 actttgcatatattatgcattgtctttaccaactgag 46409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 54500608 - 54500568
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  54500608 atatattatgcattgtctctaccaactgagctaagctcacg 54500568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 10006389 - 10006338
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||| ||||||||||||||||||||||||| ||| | ||||||||||    
T  10006389 cagaccttgcatatattatgcattgtctttaccaaatgacctaagctcacgg 10006338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 18635579 - 18635528
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||| ||||||||||||||||||||| ||| ||||||||  ||||||||||    
T  18635579 cagaccttgtatatattatgcattgtccttatcaactgagttaagctcacgg 18635528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 29908095 - 29908048
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    ||||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  29908095 atatattatgcattgtccttaccaactgagttaagctcacgaagacaa 29908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 2186345 - 2186395
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  2186345 cagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 2186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 4727143 - 4727189
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||||||||||||  | ||||||||||| |||||||    
T  4727143 gactttgtatatattatgcattgttctcaccaactgagcgaagctca 4727189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 18915068 - 18915114
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  18915068 atatattatgcattgtccttaccaactgagctaaactcacggggaca 18915114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 21266904 - 21266950
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||||||| ||| ||||| |||||||||| ||||    
T  21266904 atatattatgcattgtctttaacaattgagctaagctcacggggaca 21266950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 46676520 - 46676558
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  46676520 atatattatgcattgtccttaccaactgagctaagctca 46676558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 52270042 - 52270092
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  52270042 cagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 52270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 52869027 - 52869077
Alignment:
Q  19 ttgtatatattatgcatt-gtctttaccaactgagcaaagctcacggagac 68  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||| ||||    
T  52869027 ttgtatatattatgcatttgtctctaccaactgagctaagctcacgaagac 52869077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 6087796 - 6087747
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| |||||||||||||| ||| |||||||||||| ||||||||    
T  6087796 cagaccttgcatatattatgcattatctataccaactgagctaagctcac 6087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 16996498 - 16996453
Alignment:
Q  26 tattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    |||||||||||||  ||||||||||||| |||||||||| ||||||    
T  16996498 tattatgcattgttcttaccaactgagctaagctcacggggacaaa 16996453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 24488465 - 24488432
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgag 52  Q
    ||||||||||||||||||||| ||||||||||||    
T  24488465 ttgtatatattatgcattgtcattaccaactgag 24488432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 42316846 - 42316887
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||||| |||||||||||||||||  ||||||||||    
T  42316846 atatattatgcactgtctttaccaactgagttaagctcacgg 42316887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 10303533 - 10303573
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| |||||||||||| ||||||||||||| |||||||||    
T  10303533 atattttatgcattgtccttaccaactgagctaagctcacg 10303573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 11286793 - 11286841
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||| ||| |||||||||||||||||| |||||||||| | |||||||    
T  11286793 cagaccttgcatatattatgcattgtctctaccaactgaactaagctca 11286841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 12322712 - 12322672
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  12322712 atatattatgcattgtccgtaccaactgagctaagctcacg 12322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 19124634 - 19124686
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    ||||| ||| |||||||||| |||||||||| ||||||||  |||||||||||    
T  19124634 cagaccttgcatatattatgtattgtctttatcaactgagttaagctcacgga 19124686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 20799416 - 20799456
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  20799416 atatattatgcattgtccctaccaactgagctaagctcacg 20799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 28311515 - 28311471
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggaga 67  Q
    |||||||||||||| || |||| || |||||||||||||||||||    
T  28311515 atatattatgcattatccttactaattgagcaaagctcacggaga 28311471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 36203275 - 36203235
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  36203275 atatattatgcattgtccttatcaactgagctaagctcacg 36203235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 37692909 - 37692949
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| | ||||||||| |||||||||||    
T  37692909 atatattatgcattgtcctcaccaactgaacaaagctcacg 37692949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 39678563 - 39678607
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||| |||||||||| |||||||||  ||||||||    
T  39678563 ttgtatatattatgtattgtctttatcaactgagcttagctcacg 39678607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 43782317 - 43782357
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  43782317 cagaccttgcatatattatgcattgtcattaccaactgagc 43782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 44909870 - 44909834
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgag 52  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  44909870 actttgcatatactatgcattgtctttaccaactgag 44909834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 48955339 - 48955291
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||| |||||||| ||||||||||||  |||||||||    
T  48955339 gactttgcatatattacgcattgtccttaccaactgagataagctcacg 48955291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 49473684 - 49473644
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| |||||||||| || |||||||||    
T  49473684 atatattatgcattgtccttaccaactgggctaagctcacg 49473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 49949383 - 49949343
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  49949383 cagaccttgcatatattatgcattgtccttaccaactgagc 49949343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 50362161 - 50362201
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  50362161 atatattatgcattgtccctaccaactgagctaagctcacg 50362201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 3190 - 3140
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||| |||||||||||||||||||| |||||||||    
T  3190 cagaccttgcatatattatgtattgtctttaccaactgagctaagctcacg 3140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 18332 - 18286
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  18332 atatattatacattgtccttaccaactgagctaagctcacggagaca 18286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 17283990 - 17283949
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  17283990 atatattatgcattgtccttaccaactgagctaagctcacgg 17283949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 23228518 - 23228559
Alignment:
Q  24 tatattatgcattgtctttaccaactgagcaaagctcacgga 65  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  23228518 tatattatgcattgtccttaccaactgagctaagctcacgga 23228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 38448888 - 38448929
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  38448888 atatattatgcattgtccttaccaactgagctaagctcacgg 38448929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 47528470 - 47528515
Alignment:
Q  24 tatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||    
T  47528470 tatattatgcattgtccttaccaactgagctaagctcacggggaca 47528515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 3136710 - 3136754
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggaga 67  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||    
T  3136710 atatattatgcattgtctttaccaattgagctcagctcacggaga 3136754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 7925403 - 7925363
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  7925403 atatattatgcattgtctctaccaactgagctaagctcacg 7925363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 18166649 - 18166601
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||||||||||||| |||||||||||| |||| ||||    
T  18166649 gactttgcatatattatgcattgtctataccaactgagctaagcccacg 18166601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 24124852 - 24124900
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||||||||||||||| ||| ||||||||| || ||||||||||||||    
T  24124852 atatattatgcattgtccttaacaactgagctaaactcacggagacaaa 24124900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 34733439 - 34733399
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  34733439 atatattatgcattgtccttaccaactgagctaagctcacg 34733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 36371062 - 36371102
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  36371062 atatattatgcattgtctctaccaactgagctaagctcacg 36371102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 52441533 - 52441573
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  52441533 atatattatgcattgtctataccaactgagctaagctcacg 52441573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 16997293 - 16997332
Alignment:
Q  29 tatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  16997293 tatgcattgtctctaccaactgagctaagctcacggagac 16997332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 41926861 - 41926822
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  41926861 atatattatgcattgtccttaccaactgagctaagctcac 41926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 45140028 - 45140075
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaa 70  Q
    |||||||||||||||||  |||||||||||| |||||||||| |||||    
T  45140028 atatattatgcattgtccataccaactgagctaagctcacggggacaa 45140075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 5907838 - 5907792
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||||||||||||||| || |||||||||| |||||||||| ||||    
T  5907838 atatattatgcattgtccttgccaactgagctaagctcacggggaca 5907792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 6809811 - 6809869
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    ||||| ||| ||||||||||||||||| |||| |||||||| ||| |||||| ||||||    
T  6809811 cagacattgcatatattatgcattgtccttacaaactgagctaagttcacggggacaaa 6809869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 19620615 - 19620569
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    |||||||||| |||||| ||||||||||||| |||||||||| ||||    
T  19620615 atatattatgtattgtccttaccaactgagctaagctcacggggaca 19620569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 42045384 - 42045434
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  42045384 cagaccttgcatatattatgcattgtccataccaactgagctaagctcacg 42045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 7484715 - 7484756
Alignment:
Q  22 tatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||||| ||||| |||||| |||||||||    
T  7484715 tatatattatgcattgtctctaccagctgagctaagctcacg 7484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 15764075 - 15764042
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgag 52  Q
    ||||||||||||||||||||| ||||||||||||    
T  15764075 ttgtatatattatgcattgtccttaccaactgag 15764042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 17643330 - 17643367
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgag 52  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  17643330 gactttgtatatattctgcattgtccttaccaactgag 17643367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 21400036 - 21400085
Alignment:
Q  14 agactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||| ||| |||||||||||||||||  |||||||||||| |||||||||    
T  21400036 agaccttgcatatattatgcattgtccctaccaactgagctaagctcacg 21400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 28039872 - 28039921
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||||||||||| ||||||||||||  ||||||||    
T  28039872 cagaccttgcatatattatgcattgtccttaccaactgagttaagctcac 28039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 41677612 - 41677653
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||||||| |||||| ||||||||||||| ||||||||||    
T  41677612 atatattatgtattgtccttaccaactgagctaagctcacgg 41677653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 1408481 - 1408445
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgag 52  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  1408481 actttgcatatattatgcattgtccttaccaactgag 1408445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 10132456 - 10132512
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcacggagaca 69  Q
    ||||| ||| ||||||||||||||||| ||||||||||| | ||| |||||| ||||    
T  10132456 cagaccttgcatatattatgcattgtccttaccaactgatctaagttcacggggaca 10132512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 10292975 - 10292927
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    |||||||||||||||||  || ||||||||  |||||||||||||||||    
T  10292975 atatattatgcattgtccctatcaactgagttaagctcacggagacaaa 10292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 14520990 - 14520942
Alignment:
Q  16 actttgtatatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    |||||| |||| ||||||||||||  |||||||||||| ||||||||||    
T  14520990 actttgcatattttatgcattgtccataccaactgagctaagctcacgg 14520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 15595767 - 15595719
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagacaaa 71  Q
    |||||||||||| ||||  |||||||||||| |||||||||| ||||||    
T  15595767 atatattatgcaatgtccctaccaactgagctaagctcacggtgacaaa 15595719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 15729469 - 15729429
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  15729469 atatattatgcattgtctctaccaactgagttaagctcacg 15729429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 17139539 - 17139579
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  17139539 atatattatgcattgtccctaccaactgagctaagctcacg 17139579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 24236630 - 24236670
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagc 53  Q
    ||||| ||||| ||||||||||||||| |||||||||||||    
T  24236630 cagaccttgtaaatattatgcattgtccttaccaactgagc 24236670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 26803465 - 26803513
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| |||||||||||||||||  |||||||||||| ||| |||||    
T  26803465 gactttgcatatattatgcattgtccataccaactgagctaagttcacg 26803513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 27127273 - 27127225
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||| |||||||||||||||||| || |||| |||||||| |||||||    
T  27127273 cagaccttgtatatattatgcattatccttactaactgagctaagctca 27127225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 31890771 - 31890811
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  31890771 atatattatgcattgtccttaccaactgagctaaactcacg 31890811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 32864339 - 32864303
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactga 51  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  32864339 gactttgcatatattatgcattgtctctaccaactga 32864303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 34632208 - 34632168
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||| |||||||| |||||||||||| |||||||||    
T  34632208 atatattatacattgtctataccaactgagctaagctcacg 34632168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 40227878 - 40227830
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctca 61  Q
    ||||| |||||||| ||||||||||||  |||||||||||| |||||||    
T  40227878 cagaccttgtatattttatgcattgtccataccaactgagctaagctca 40227830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 49875621 - 49875661
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  49875621 atatattatgcattgtccttaccaactgagttaagctcacg 49875661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 50638938 - 50638974
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagct 59  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  50638938 atatattatgcattgtccttaccaactgagctaagct 50638974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 50849095 - 50849135
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  50849095 atatattatgcattgtcattaccaactgagttaagctcacg 50849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 21773 - 21817
Alignment:
Q  19 ttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||    
T  21773 ttgtatattttatgcattgtctataccaactgagctaagctcacg 21817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 239854 - 239806
Alignment:
Q  15 gactttgtatatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||| ||||||||||||||||| ||||||||||||| || ||||||    
T  239854 gactttgcatatattatgcattgtccttaccaactgagctaaactcacg 239806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 25428 - 25387
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacgg 64  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  25428 atatattatgcattgtccttaccaactgagttaagctcacgg 25387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 42346 - 42395
Alignment:
Q  13 cagactttgtatatattatgcattgtctttaccaactgagcaaagctcac 62  Q
    ||||| ||| ||||||||||||||||| || |||||||||| ||||||||    
T  42346 cagaccttgcatatattatgcattgtccttcccaactgagctaagctcac 42395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 91584 - 91629
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacggagac 68  Q
    |||||||||||||| || ||| ||||||||| ||||||||||||||    
T  91584 atatattatgcattatccttaacaactgagctaagctcacggagac 91629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 34910 - 34950
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||| ||||||||||||  |||||||||    
T  34910 atatattatgcattgtccttaccaactgagttaagctcacg 34950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 40037 - 39997
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    |||||||||||||||||  |||||||||||| |||||||||    
T  40037 atatattatgcattgtccataccaactgagctaagctcacg 39997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 5464 - 5424
Alignment:
Q  23 atatattatgcattgtctttaccaactgagcaaagctcacg 63  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  5464 atatattatgcattgttcttaccaactgagctaagctcacg 5424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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