View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16596_low_18 (Length: 341)

Name: NF16596_low_18
Description: NF16596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16596_low_18
NF16596_low_18
[»] chr4 (37 HSPs)
chr4 (12-306)||(27613178-27613467)
chr4 (12-159)||(514120-514272)
chr4 (12-159)||(18307649-18307801)
chr4 (159-201)||(33808066-33808108)
chr4 (159-199)||(44490026-44490066)
chr4 (159-210)||(17846991-17847042)
chr4 (159-198)||(48552002-48552041)
chr4 (159-206)||(51371361-51371408)
chr4 (159-196)||(10588776-10588813)
chr4 (159-204)||(23553260-23553305)
chr4 (159-200)||(28264487-28264528)
chr4 (159-199)||(36444587-36444627)
chr4 (159-199)||(40988478-40988518)
chr4 (159-198)||(2055102-2055141)
chr4 (159-198)||(5227586-5227625)
chr4 (159-198)||(17847409-17847448)
chr4 (159-198)||(19169051-19169090)
chr4 (159-198)||(19496431-19496470)
chr4 (159-198)||(22298336-22298375)
chr4 (159-198)||(26017269-26017308)
chr4 (159-198)||(28160240-28160279)
chr4 (159-198)||(30141362-30141401)
chr4 (159-198)||(42549877-42549916)
chr4 (159-198)||(50276420-50276459)
chr4 (159-205)||(24623324-24623370)
chr4 (159-197)||(25734508-25734546)
chr4 (159-197)||(28812194-28812232)
chr4 (159-197)||(31208566-31208604)
chr4 (159-197)||(31973787-31973825)
chr4 (159-201)||(41355196-41355238)
chr4 (159-201)||(49118454-49118496)
chr4 (165-198)||(8882305-8882338)
chr4 (159-200)||(33173924-33173965)
chr4 (165-206)||(56555435-56555476)
chr4 (159-207)||(12196286-12196334)
chr4 (159-199)||(22298714-22298754)
chr4 (159-195)||(28159862-28159898)
[»] chr7 (22 HSPs)
chr7 (12-159)||(6939281-6939433)
chr7 (159-198)||(43753060-43753099)
chr7 (160-202)||(31684036-31684078)
chr7 (159-197)||(41107200-41107238)
chr7 (159-200)||(11476841-11476882)
chr7 (159-199)||(47119836-47119876)
chr7 (159-198)||(37394282-37394321)
chr7 (159-198)||(39033878-39033917)
chr7 (159-198)||(43968544-43968583)
chr7 (159-198)||(47281411-47281450)
chr7 (159-201)||(33884168-33884209)
chr7 (159-197)||(40851130-40851168)
chr7 (159-197)||(45233714-45233752)
chr7 (159-197)||(47281030-47281068)
chr7 (159-196)||(18353341-18353378)
chr7 (159-200)||(27772980-27773021)
chr7 (159-199)||(1469778-1469818)
chr7 (159-199)||(2960545-2960585)
chr7 (159-195)||(29739521-29739557)
chr7 (159-199)||(30876455-30876495)
chr7 (159-199)||(45723396-45723436)
chr7 (159-199)||(47294196-47294236)
[»] chr2 (20 HSPs)
chr2 (159-200)||(3430529-3430570)
chr2 (159-200)||(17484454-17484495)
chr2 (159-207)||(42630158-42630206)
chr2 (159-202)||(36211243-36211286)
chr2 (159-199)||(920838-920878)
chr2 (159-195)||(45123967-45124003)
chr2 (160-199)||(7378779-7378818)
chr2 (160-203)||(16246479-16246522)
chr2 (159-198)||(23671718-23671757)
chr2 (159-201)||(2094314-2094356)
chr2 (159-193)||(2455832-2455866)
chr2 (159-201)||(8396474-8396516)
chr2 (159-205)||(17270431-17270476)
chr2 (159-197)||(41178304-41178342)
chr2 (159-196)||(36210865-36210902)
chr2 (169-201)||(20026232-20026264)
chr2 (159-199)||(31214102-31214142)
chr2 (159-199)||(37732098-37732138)
chr2 (159-199)||(41500778-41500818)
chr2 (159-211)||(43249305-43249357)
[»] chr5 (30 HSPs)
chr5 (159-207)||(3352286-3352334)
chr5 (159-198)||(16751962-16752001)
chr5 (159-201)||(11001013-11001055)
chr5 (159-201)||(26593565-26593607)
chr5 (159-205)||(42993328-42993374)
chr5 (159-199)||(6600041-6600081)
chr5 (159-195)||(8689767-8689803)
chr5 (159-199)||(33003237-33003277)
chr5 (159-198)||(6600421-6600460)
chr5 (159-198)||(8689389-8689428)
chr5 (159-198)||(9919188-9919227)
chr5 (159-206)||(9919801-9919848)
chr5 (159-198)||(11935294-11935333)
chr5 (159-198)||(17002441-17002480)
chr5 (159-198)||(20408729-20408768)
chr5 (159-198)||(26035272-26035311)
chr5 (159-198)||(27116005-27116044)
chr5 (159-198)||(27457103-27457142)
chr5 (159-198)||(35861490-35861529)
chr5 (158-197)||(42993713-42993752)
chr5 (159-201)||(20079542-20079584)
chr5 (159-201)||(31710096-31710138)
chr5 (159-201)||(35341994-35342036)
chr5 (159-200)||(19661916-19661957)
chr5 (159-196)||(40075146-40075183)
chr5 (159-199)||(6252168-6252208)
chr5 (159-199)||(8216096-8216136)
chr5 (159-195)||(11692432-11692468)
chr5 (159-199)||(28078690-28078730)
chr5 (159-199)||(39125941-39125981)
[»] chr1 (22 HSPs)
chr1 (159-207)||(34971264-34971312)
chr1 (159-197)||(21929340-21929378)
chr1 (159-200)||(18917720-18917761)
chr1 (159-200)||(49594866-49594907)
chr1 (159-199)||(46051646-46051686)
chr1 (159-195)||(46095360-46095396)
chr1 (165-200)||(24036576-24036611)
chr1 (159-198)||(30281807-30281846)
chr1 (159-198)||(36157962-36158001)
chr1 (159-198)||(49094996-49095035)
chr1 (159-201)||(16705713-16705755)
chr1 (159-193)||(16706066-16706100)
chr1 (159-197)||(18781996-18782034)
chr1 (159-197)||(19274377-19274415)
chr1 (159-205)||(21929722-21929767)
chr1 (159-197)||(24204755-24204793)
chr1 (159-197)||(41105834-41105872)
chr1 (159-200)||(25800837-25800878)
chr1 (159-200)||(28425267-28425308)
chr1 (165-206)||(48319308-48319349)
chr1 (159-195)||(7651509-7651545)
chr1 (159-199)||(24204376-24204416)
[»] chr6 (15 HSPs)
chr6 (159-198)||(6785007-6785046)
chr6 (159-199)||(26393294-26393334)
chr6 (159-198)||(12613106-12613145)
chr6 (160-199)||(12626833-12626872)
chr6 (159-198)||(17428178-17428217)
chr6 (159-205)||(1077433-1077479)
chr6 (159-197)||(1915628-1915666)
chr6 (159-197)||(2643932-2643970)
chr6 (159-201)||(29050086-29050128)
chr6 (159-197)||(30457509-30457547)
chr6 (159-200)||(3408033-3408074)
chr6 (159-196)||(30378836-30378873)
chr6 (160-208)||(2390101-2390149)
chr6 (166-198)||(12626453-12626485)
chr6 (159-199)||(17942854-17942894)
[»] chr3 (36 HSPs)
chr3 (159-198)||(20813726-20813765)
chr3 (159-198)||(47329459-47329498)
chr3 (159-201)||(1448638-1448680)
chr3 (159-197)||(47329082-47329120)
chr3 (159-209)||(51562358-51562408)
chr3 (159-200)||(1016888-1016929)
chr3 (159-208)||(1687487-1687536)
chr3 (159-204)||(19664352-19664397)
chr3 (159-200)||(20086218-20086259)
chr3 (159-196)||(42016724-42016761)
chr3 (159-199)||(8097217-8097257)
chr3 (159-199)||(36315257-36315297)
chr3 (159-199)||(38446293-38446333)
chr3 (159-199)||(44152516-44152556)
chr3 (159-198)||(20760356-20760395)
chr3 (159-198)||(21564342-21564381)
chr3 (159-198)||(21656714-21656753)
chr3 (159-198)||(31122858-31122897)
chr3 (159-198)||(47473076-47473115)
chr3 (159-198)||(53926265-53926304)
chr3 (159-197)||(10618388-10618426)
chr3 (159-209)||(12748556-12748606)
chr3 (159-197)||(19229246-19229284)
chr3 (159-205)||(21564692-21564738)
chr3 (159-201)||(32651105-32651147)
chr3 (159-208)||(33473524-33473574)
chr3 (159-201)||(35608386-35608428)
chr3 (159-201)||(41250731-41250773)
chr3 (159-205)||(50287376-50287422)
chr3 (159-200)||(21890366-21890407)
chr3 (159-200)||(49799015-49799056)
chr3 (159-200)||(49799348-49799389)
chr3 (159-196)||(53196209-53196246)
chr3 (159-199)||(22851812-22851852)
chr3 (159-199)||(44152869-44152909)
chr3 (159-199)||(55164400-55164440)
[»] chr8 (14 HSPs)
chr8 (159-201)||(1293301-1293343)
chr8 (159-200)||(9884671-9884712)
chr8 (159-199)||(24430476-24430516)
chr8 (165-196)||(1293689-1293720)
chr8 (159-198)||(24430857-24430896)
chr8 (159-198)||(43468909-43468948)
chr8 (159-197)||(3875786-3875824)
chr8 (159-197)||(22684244-22684282)
chr8 (159-209)||(28496250-28496300)
chr8 (159-195)||(6016381-6016417)
chr8 (159-195)||(7435058-7435094)
chr8 (159-199)||(24193568-24193608)
chr8 (159-199)||(33652037-33652077)
chr8 (159-199)||(41536432-41536472)
[»] scaffold0727 (1 HSPs)
scaffold0727 (159-204)||(5381-5426)
[»] scaffold0717 (1 HSPs)
scaffold0717 (159-198)||(2042-2081)
[»] scaffold0117 (1 HSPs)
scaffold0117 (159-198)||(14495-14534)


Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 12 - 306
Target Start/End: Complemental strand, 27613467 - 27613178
Alignment:
Q  12 aagaacacattccaaccacttcc---aaaaaataaaatacaaacttttatcatatttgaactggtacctaaccctaacattgaagttaaaaatactgaga 108  Q
    |||||||||||||||||||||||   |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  27613467 aagaacacattccaaccacttcccaaaaaaaaaaaaatgcaaacttttatcatatttgaaccggtacctaaccctaacattgaagttaaaaaaattgaga 27613368  T
Q  109 taagtaaaaaa-cctcaaacaacatgaaacatgtaactatcactataaattaaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttat 207  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||         | |    
T  27613367 taagtaaaaaaacctcaaacaacatgaaacatgtaattatcactataaattaaaacgaaaaacttaaaggacctttagatgcatttga---------tct 27613277  T
Q  208 taacgtataacattttttaataagttatatcaagtacaatttaatcttataacgtatcatttttgtcacgttatcttaattgaaaaatttaaatattac 306  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27613276 taacttataacattttttaataagttatatcaagtacaatttaatcttataacgtatcatttttgtcacgctatcttaattgaaaaatttaaatattac 27613178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 514272 - 514120
Alignment:
Q  12 aagaacacattccaaccacttccaaaaaataaaatacaaacttttatcatatttgaactggtacctaaccctaacattgaag--ttaaaaatactgagat 109  Q
    |||||||||||||||||| |||| |||||    ||| |||||| ||||| ||||||||| ||| ||||||||||||||||||  ||||||| ||| ||||    
T  514272 aagaacacattccaaccaattcccaaaaa----atataaacttgtatcaaatttgaactagtaactaaccctaacattgaagtattaaaaaaactcagat 514177  T
Q  110 aagtaaaaaacctcaaa-------caacatgaaacatgtaactatcactataaatta 159  Q
    |||||||||| ||||||        | ||||| ||||||||||||||||||||||||    
T  514176 aagtaaaaaatctcaaatagccttgatcatgagacatgtaactatcactataaatta 514120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 18307649 - 18307801
Alignment:
Q  12 aagaacacattccaaccacttccaaaaaataaaatacaaacttttatcatatttgaactggtacctaaccctaacattgaag--ttaaaaatactgagat 109  Q
    |||||||||||||||||| |||| |||||    ||| |||||| ||||| ||||||||| ||| ||||||||||||||||||  ||||||| ||| ||||    
T  18307649 aagaacacattccaaccaattcccaaaaa----atataaacttgtatcaaatttgaactagtaactaaccctaacattgaagtattaaaaaaactcagat 18307744  T
Q  110 aagtaaaaaacctcaaa-------caacatgaaacatgtaactatcactataaatta 159  Q
    |||||||||| ||||||        | ||||| ||||||||||||||||||||||||    
T  18307745 aagtaaaaaatctcaaatagccttgatcatgagacatgtaactatcactataaatta 18307801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 33808066 - 33808108
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  33808066 aaaacgaaaaacttaaagaacctttagatgcatttgacctttt 33808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 44490066 - 44490026
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  44490066 aaaacgaaaaacttaaagaacctttagatgcatttgacctt 44490026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 17847042 - 17846991
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttattaa 210  Q
    ||||||||||| |||||| |||||||||||||||||||||| | ||||||||    
T  17847042 aaaacgaaaaacttaaaggacctttagatgcatttgaccttatttttattaa 17846991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 48552002 - 48552041
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  48552002 aaaacgaaaaacttaaagaacctttagatgcatttgacct 48552041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 51371361 - 51371408
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattta 206  Q
    ||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  51371361 aaaacgaaaaacttaaaggacctttagatgcatttgacctttttttta 51371408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 10588776 - 10588813
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    |||||||||||||||||| |||||||||||||||||||    
T  10588776 aaaacgaaaaatttaaaggacctttagatgcatttgac 10588813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 23553260 - 23553305
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatt 204  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  23553260 aaaacgaaaaacttaaaggacctttagatgcatttgaccatttatt 23553305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 28264528 - 28264487
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  28264528 aaaacgaaaaacttaaaggacctttagatgcatttgaccttt 28264487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 36444627 - 36444587
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  36444627 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 36444587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 40988518 - 40988478
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  40988518 aaaacaaaaaatttaaagaacctttagatgcatttaacctt 40988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 2055141 - 2055102
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  2055141 aaaacgaaaaacttaaaggacctttagatgcatttgacct 2055102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 5227586 - 5227625
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  5227586 aaaacgaaaaacttaaaggacctttagatgcatttgacct 5227625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 17847409 - 17847448
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17847409 aaaacgaaaaacttaaaggacctttagatgcatttgacct 17847448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 19169051 - 19169090
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19169051 aaaacgaaaaacttaaaggacctttagatgcatttgacct 19169090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 19496431 - 19496470
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  19496431 aaaacgaaaaacttaaaggacctttagatgcatttgacct 19496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 22298375 - 22298336
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  22298375 aaaacgaaaaacttaaaggacctttagatgcatttgacct 22298336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 26017308 - 26017269
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26017308 aaaacgaaaaacttaaaggacctttagatgcatttgacct 26017269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 28160240 - 28160279
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  28160240 aaaacgaaaaacttaaaggacctttagatgcatttgacct 28160279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 30141362 - 30141401
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  30141362 aaaacgaaaaacttaaaggacctttagatgcatttgacct 30141401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 42549877 - 42549916
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  42549877 aaaacgaaaaacttaaagaacctttagatgtatttgacct 42549916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 50276420 - 50276459
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  50276420 aaaacgaaaaacttaaaggacctttagatgcatttgacct 50276459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 24623324 - 24623370
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  24623324 aaaacgaaaaacttaaaagaccttaagatgcatttgaccttttattt 24623370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 25734508 - 25734546
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  25734508 aaaacgaaaaacttaaaggacctttagatgcatttgacc 25734546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 28812232 - 28812194
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  28812232 aaaacgaaaaacttaaaggacctttagatgcatttgacc 28812194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 31208604 - 31208566
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  31208604 aaaacgaaaaacttaaaggacctttagatgcatttgacc 31208566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 31973787 - 31973825
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    |||||||||||||||||| || |||||||||||||||||    
T  31973787 aaaacgaaaaatttaaaggacatttagatgcatttgacc 31973825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 41355238 - 41355196
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    |||| ||||||||||||| |||||||||||||||||| |||||    
T  41355238 aaaatgaaaaatttaaaggacctttagatgcatttgatctttt 41355196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 49118496 - 49118454
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||    
T  49118496 aaaacgaaaaacttaaaggacctttagatgcatttgacttttt 49118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 8882305 - 8882338
Alignment:
Q  165 aaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||| |||||||||||||||||||||    
T  8882305 aaaaatttaaaggacctttagatgcatttgacct 8882338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 33173965 - 33173924
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    |||| |||||| |||||| |||||||||||||||||||||||    
T  33173965 aaaatgaaaaacttaaaggacctttagatgcatttgaccttt 33173924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 56555435 - 56555476
Alignment:
Q  165 aaaaatttaaagaacctttagatgcatttgaccttttattta 206  Q
    ||||| |||||| |||||||||||||||||||||||| ||||    
T  56555435 aaaaacttaaaggacctttagatgcatttgacctttttttta 56555476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 12196334 - 12196286
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttat 207  Q
    ||||||||||| |||||| ||||||| |||||||||||||  |||||||    
T  12196334 aaaacgaaaaacttaaaggacctttaaatgcatttgacctaatatttat 12196286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 22298714 - 22298754
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| || |||||||||||||||||||    
T  22298714 aaaacgaaaaacttaaaggacatttagatgcatttgacctt 22298754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 28159898 - 28159862
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  28159898 aaaacgaaaaacttaaaggacctttagatgcatttga 28159862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 6939433 - 6939281
Alignment:
Q  12 aagaacacattccaaccacttccaaaaaataaaatacaaacttttatcatatttgaactggtacctaaccctaacattgaag--ttaaaaatactgagat 109  Q
    |||||||||||||||||| |||| |||||    ||| |||||| ||||| ||||||||| ||| ||||||||||||||||||  ||||||| ||| ||||    
T  6939433 aagaacacattccaaccaattcccaaaaa----atataaacttgtatcaaatttgaactagtaactaaccctaacattgaagtattaaaaaaactcagat 6939338  T
Q  110 aagtaaaaaacctcaaa-------caacatgaaacatgtaactatcactataaatta 159  Q
    |||||||||| ||||||        | ||||| ||||||||||||||||||||||||    
T  6939337 aagtaaaaaatctcaaatagccttgatcatgagacatgtaactatcactataaatta 6939281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 43753060 - 43753099
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43753060 aaaacgaaaaacttaaagaacctttagatgcatttgacct 43753099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 31684078 - 31684036
Alignment:
Q  160 aaacgaaaaatttaaagaacctttagatgcatttgacctttta 202  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  31684078 aaacgaaaaacttaaaggacctttagatgcatttgacctttta 31684036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 41107238 - 41107200
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  41107238 aaaacgaaaaatttaaagaacatttagatgcatttgacc 41107200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 11476841 - 11476882
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  11476841 aaaacgaaaaacttaaaggacctttagatgcatttgaccttt 11476882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 47119876 - 47119836
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  47119876 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 47119836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 37394282 - 37394321
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  37394282 aaaacgaaaaacttaaagaacctttagatgcatttaacct 37394321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 39033917 - 39033878
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39033917 aaaacgaaaaacttaaaggacctttagatgcatttgacct 39033878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 43968544 - 43968583
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  43968544 aaaacgaaaaacttaaaggacctttagatgcatttgacct 43968583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 47281411 - 47281450
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  47281411 aaaacgaaaaacttaaaggacctttagatgcatttgacct 47281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 33884209 - 33884168
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  33884209 aaaacaaaaaatttaaa-aacctttagatgcatttgacctttt 33884168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 40851168 - 40851130
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  40851168 aaaacgaaaaacttaaaggacctttagatgcatttgacc 40851130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 45233714 - 45233752
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  45233714 aaaatgaaaaatttaaaggacctttagatgcatttgacc 45233752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 47281068 - 47281030
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  47281068 aaaacgaaaaacttaaaggacctttagatgcatttgacc 47281030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 18353341 - 18353378
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  18353341 aaaacgaaaaacttaaagaacttttagatgcatttgac 18353378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 27773021 - 27772980
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  27773021 aaaactaaaaacttaaaggacctttagatgcatttgaccttt 27772980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 1469778 - 1469818
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| || |||||||||||||||||||    
T  1469778 aaaacgaaaaacttaaaggacatttagatgcatttgacctt 1469818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 2960585 - 2960545
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||||||| || |||||| ||||||||||||||||||||||    
T  2960585 aaaacgaacaacttaaaggacctttagatgcatttgacctt 2960545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 29739557 - 29739521
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  29739557 aaaacgaaaaacttaaaggacctttagatgcatttga 29739521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 30876455 - 30876495
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||| ||||||||||||||    
T  30876455 aaaacgaaaaacttaaaggacctttaaatgcatttgacctt 30876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 45723436 - 45723396
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  45723436 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 45723396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 47294236 - 47294196
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  47294236 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 47294196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 3430570 - 3430529
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  3430570 aaaacgaaaaacttaaagaacctttagatgcatttgaccttt 3430529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 17484495 - 17484454
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  17484495 aaaacgaaaaacttaaagaacctttagatgcatttgaccttt 17484454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 42630158 - 42630206
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttat 207  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  42630158 aaaacgaaaaacttaaaagacctttagatgcatttgaccttttatttat 42630206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 36211243 - 36211286
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttta 202  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  36211243 aaaacgaaaaacttaaaggacctttagatgcatttgacctttta 36211286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 920878 - 920838
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  920878 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 920838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 45124003 - 45123967
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45124003 aaaacgaaaaacttaaagaacctttagatgcatttga 45123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 7378818 - 7378779
Alignment:
Q  160 aaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  7378818 aaacgaaaaacttaaagaacctttagattcatttgacctt 7378779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 16246479 - 16246522
Alignment:
Q  160 aaacgaaaaatttaaagaacctttagatgcatttgaccttttat 203  Q
    |||||||||| |||||| |||||||||||||||||||| |||||    
T  16246479 aaacgaaaaacttaaaggacctttagatgcatttgaccatttat 16246522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 23671757 - 23671718
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  23671757 aaaacgaaaaacttaaaggacctttagatgcatttgacct 23671718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 2094356 - 2094314
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    |||| |||||| |||||| ||||||||||||||||||||||||    
T  2094356 aaaatgaaaaacttaaaggacctttagatgcatttgacctttt 2094314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 2455866 - 2455832
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcattt 193  Q
    ||||||||||| |||||||||||||||||||||||    
T  2455866 aaaacgaaaaacttaaagaacctttagatgcattt 2455832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 8396516 - 8396474
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||| ||||||||| || ||||||||||||||||||||||||    
T  8396516 aaaacaaaaaatttataggacctttagatgcatttgacctttt 8396474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 17270431 - 17270476
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  17270431 aaaacaaaaaacttaaaga-cctttagatgcatttgaccttttattt 17270476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 41178304 - 41178342
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  41178304 aaaacgaaaaacttaaaggacctttagatgcatttgacc 41178342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 36210902 - 36210865
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  36210902 aaaacgaaaaacttaaagaaccttcagatgcatttgac 36210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 20026232 - 20026264
Alignment:
Q  169 atttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||||||| |||||||||||||||||    
T  20026232 atttaaagaacctttggatgcatttgacctttt 20026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 31214102 - 31214142
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||  ||||||||||||||||||||||    
T  31214102 aaaacgaaaaacttaaaagacctttagatgcatttgacctt 31214142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 37732138 - 37732098
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  37732138 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 37732098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 41500778 - 41500818
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||  ||||||||||||||||||||||    
T  41500778 aaaacgaaaaacttaaatgacctttagatgcatttgacctt 41500818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 43249357 - 43249305
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttattaac 211  Q
    |||| |||||| |||||| |||||||||||||||||| ||||  |||||||||    
T  43249357 aaaatgaaaaacttaaaggacctttagatgcatttgatctttagtttattaac 43249305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 3352286 - 3352334
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttat 207  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  3352286 aaaacgaaaaatttaaaggacctttagatgcatttgacctattttttat 3352334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 16752001 - 16751962
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  16752001 aaaacgaaaaatttaaaggacctttagatgcatttgacct 16751962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 11001013 - 11001055
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  11001013 aaaacgaaaaacttaaaggacctttagatgcatttgacctttt 11001055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 26593565 - 26593607
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  26593565 aaaacgaaaaacttaaaggacctttagatgcatttgacctttt 26593607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 42993374 - 42993328
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  42993374 aaaacgaaaaatttaagggacctttagatgcatttgacctattattt 42993328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 6600081 - 6600041
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  6600081 aaaacgaaaaacttaaagaacgtttagatgcatttgacctt 6600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 8689767 - 8689803
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8689767 aaaacgaaaaacttaaagaacctttagatgcatttga 8689803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 33003237 - 33003277
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  33003237 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 33003277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 6600421 - 6600460
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6600421 aaaacgaaaaacttaaaggacctttagatgcatttgacct 6600460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 8689428 - 8689389
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  8689428 aaaacgaaaaacttaaagaacctttaaatgcatttgacct 8689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 9919227 - 9919188
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  9919227 aaaacgaaaaatttaaaggacctttggatgcatttgacct 9919188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9919801 - 9919848
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattta 206  Q
    ||||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  9919801 aaaacgaaaaacttaaaggacctttggatgcatttgacctttttttta 9919848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 11935333 - 11935294
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  11935333 aaaacgaaaaacttaaaggacctttagatgcatttgacct 11935294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 17002441 - 17002480
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  17002441 aaaacgaaaaacttaaaggacctttagatgcatttgacct 17002480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 20408729 - 20408768
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  20408729 aaaacgaaaaacttaaaggacctttagatgcatttgacct 20408768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 26035311 - 26035272
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26035311 aaaacgaaaaacttaaaggacctttagatgcatttgacct 26035272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 27116044 - 27116005
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  27116044 aaaacgaaaaacttaaagaacctttagatacatttgacct 27116005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 27457142 - 27457103
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  27457142 aaaacgaaaaacttaaagaacctttaaatgcatttgacct 27457103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 35861490 - 35861529
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  35861490 aaaacgaaaaacttaaaggacctttagatgcatttgacct 35861529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 42993713 - 42993752
Alignment:
Q  158 taaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  42993713 taaaacgaaaaatttaaaggacatttagatgcatttgacc 42993752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 20079542 - 20079584
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||    
T  20079542 aaaacgaaaaacttaaaggacctttagatgtatttgacctttt 20079584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 31710138 - 31710096
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||    
T  31710138 aaaacgaaaaacttaaaggacctttagatgtatttgacctttt 31710096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 35342036 - 35341994
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||    
T  35342036 aaaacgaaaaacttaaagaacatttaaatgcatttgacctttt 35341994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 19661916 - 19661957
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  19661916 aaaacgaaaaacttaaacgacctttagatgcatttgaccttt 19661957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 40075146 - 40075183
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  40075146 aaaatgaaaaatttaaagaatctttagatgcatttgac 40075183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 6252168 - 6252208
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  6252168 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 6252208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 8216096 - 8216136
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  8216096 aaaatgaaaaatttaaaggacctttaaatgcatttgacctt 8216136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 11692432 - 11692468
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  11692432 aaaacgaaaaacttaaagaacctttagatacatttga 11692468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 28078690 - 28078730
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| || |||||||||||||||||||    
T  28078690 aaaacgaaaaacttaaaggacttttagatgcatttgacctt 28078730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 39125981 - 39125941
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| | ||||||||||||||||||||    
T  39125981 aaaacgaaaaacttaaaggatctttagatgcatttgacctt 39125941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 34971264 - 34971312
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttat 207  Q
    ||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  34971264 aaaacgaaaaacttaaaggacctttagatgcatttgaccttttctttat 34971312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 21929378 - 21929340
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21929378 aaaacgaaaaatttaaaggacctttagatgcatttgacc 21929340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 18917720 - 18917761
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||||||||||| |||||||||||||||    
T  18917720 aaaacgaaaaacttaaagaacctttaaatgcatttgaccttt 18917761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 49594907 - 49594866
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  49594907 aaaacgaaaaacttaaaggacctttagatgcatttgaccttt 49594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 46051646 - 46051686
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  46051646 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 46051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 46095360 - 46095396
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    |||||||||||||||||| ||||||||||||||||||    
T  46095360 aaaacgaaaaatttaaaggacctttagatgcatttga 46095396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 24036611 - 24036576
Alignment:
Q  165 aaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    |||||||||||| |||||||||||||||||||||||    
T  24036611 aaaaatttaaaggacctttagatgcatttgaccttt 24036576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 30281807 - 30281846
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  30281807 aaaacgaaaaatttaaaggacctttagatacatttgacct 30281846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 36157962 - 36158001
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  36157962 aaaacgaaaaacttaaaggacctttagatgcatttgacct 36158001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 49094996 - 49095035
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  49094996 aaaacgaaaaacttaaagaacctttggatgcatttgacct 49095035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 16705755 - 16705713
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| |||||||||||||||| |||||||    
T  16705755 aaaacgaaaaacttaaaggacctttagatgcatttcacctttt 16705713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 16706066 - 16706100
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcattt 193  Q
    ||||||||||| |||||||||||||||||||||||    
T  16706066 aaaacgaaaaacttaaagaacctttagatgcattt 16706100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 18782034 - 18781996
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  18782034 aaaacgaaaaacttaaaggacctttagatgcatttgacc 18781996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 19274415 - 19274377
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  19274415 aaaacgaaaaacttaaaggacctttagatgcatttgacc 19274377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 21929722 - 21929767
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  21929722 aaaacgaaaaacttaaaga-cctttagatgcatttgacattttattt 21929767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 24204755 - 24204793
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  24204755 aaaacgaaaaacttaaaggacctttagatgcatttgacc 24204793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 41105872 - 41105834
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  41105872 aaaacgaaaaacttaaaggacctttagatgcatttgacc 41105834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 25800837 - 25800878
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    |||| |||||| |||||| |||||||||||||||||||||||    
T  25800837 aaaaagaaaaacttaaaggacctttagatgcatttgaccttt 25800878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 28425308 - 28425267
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    |||| |||||| |||||| |||||||||||||||||||||||    
T  28425308 aaaatgaaaaacttaaaggacctttagatgcatttgaccttt 28425267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 48319308 - 48319349
Alignment:
Q  165 aaaaatttaaagaacctttagatgcatttgaccttttattta 206  Q
    ||||| ||||| |||||||||||||||||||||||| |||||    
T  48319308 aaaaacttaaataacctttagatgcatttgacctttaattta 48319349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 7651545 - 7651509
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  7651545 aaaacgaaaaacttaaaggacctttagatgcatttga 7651509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 24204416 - 24204376
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  24204416 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 24204376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 6785046 - 6785007
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  6785046 aaaacgaaaaacttaaagaacctttagatgcatttgacct 6785007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 26393294 - 26393334
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  26393294 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 26393334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 12613106 - 12613145
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  12613106 aaaatgaaaaacttaaagaacctttagatgcatttgacct 12613145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 12626833 - 12626872
Alignment:
Q  160 aaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  12626833 aaacgaaaaacttaaaggacctttagatgcatttgacctt 12626872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 17428217 - 17428178
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  17428217 aaaacgaaaaacttaaagaatctttagatgcatttgacct 17428178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 1077433 - 1077479
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    ||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  1077433 aaaacgaaaaacttaaaggacctttagacgcatttgacctttaattt 1077479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 1915628 - 1915666
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    |||||||||||||||||| || |||||||||||||||||    
T  1915628 aaaacgaaaaatttaaaggacttttagatgcatttgacc 1915666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 2643970 - 2643932
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  2643970 aaaacgaaaaacttaaaggacctttagatgcatttgacc 2643932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 29050128 - 29050086
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| || |||||||||||||||||||||    
T  29050128 aaaacgaaaaacttaaaggacttttagatgcatttgacctttt 29050086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 30457509 - 30457547
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  30457509 aaaacgaaaaacttaaaggacctttagatgcatttgacc 30457547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 3408074 - 3408033
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  3408074 aaaacgaaaaacttaaaggacttttagatgcatttgaccttt 3408033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 30378873 - 30378836
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  30378873 aaaacgaaaaacttaaaggacctttagatgcatttgac 30378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 2390149 - 2390101
Alignment:
Q  160 aaacgaaaaatttaaagaacctttagatgcatttgaccttttatttatt 208  Q
    |||||||||| |||||  |||||||||||||||||||||  ||||||||    
T  2390149 aaacgaaaaacttaaaagacctttagatgcatttgacctaatatttatt 2390101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 12626485 - 12626453
Alignment:
Q  166 aaaatttaaagaacctttagatgcatttgacct 198  Q
    |||| ||||||||||||||||||||||||||||    
T  12626485 aaaacttaaagaacctttagatgcatttgacct 12626453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 17942894 - 17942854
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||| ||||||||||||||    
T  17942894 aaaacgaaaaacttaaaggacctttaaatgcatttgacctt 17942854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 20813726 - 20813765
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20813726 aaaacgaaaaatttaaaggacctttagatgcatttgacct 20813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 47329459 - 47329498
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  47329459 aaaacgaaaaacttaaagaacctttagatgcatttgacct 47329498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 1448680 - 1448638
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  1448680 aaaacgaaaaacttaaaggacctttagatgcatttgacctttt 1448638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 47329120 - 47329082
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  47329120 aaaacgaaaaacttaaagaacctttagatgcatttgacc 47329082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 51562358 - 51562408
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttatta 209  Q
    ||||||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  51562358 aaaacgaaaaacttaaagaacttttagatgcatttgacctttaagttatta 51562408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 1016929 - 1016888
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  1016929 aaaacgaaaaacttaaaggacctttagatgcatttgaccttt 1016888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1687536 - 1687487
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttatt 208  Q
    ||||||||||| |||||| |||||||||||||||||||| || |||||||    
T  1687536 aaaacgaaaaacttaaaggacctttagatgcatttgacccttaatttatt 1687487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 19664397 - 19664352
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatt 204  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||    
T  19664397 aaaacgaaaaacttaaaggacctttagatgcatttgacctattatt 19664352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 20086259 - 20086218
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  20086259 aaaacaaaaaatttaaaggacctttagatgcatttgaccttt 20086218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 42016761 - 42016724
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42016761 aaaacgaaaaatttaaagaacttttagatgcatttgac 42016724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 8097217 - 8097257
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  8097217 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 8097257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 36315257 - 36315297
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  36315257 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 36315297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 38446333 - 38446293
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  38446333 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 38446293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 44152556 - 44152516
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  44152556 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 44152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 20760356 - 20760395
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  20760356 aaaacgaaaaacttaaaggacctttagatgcatttgacct 20760395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 21564381 - 21564342
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  21564381 aaaacgaaaaacttaaaggacctttagatgcatttgacct 21564342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 21656714 - 21656753
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  21656714 aaaacgaaaaacttaaaggacctttagatgcatttgacct 21656753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 31122858 - 31122897
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  31122858 aaaacgaaaaagttaaaggacctttagatgcatttgacct 31122897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 47473115 - 47473076
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  47473115 aaaacgaaaaacttaaagaatctttagatgcatttgacct 47473076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 53926265 - 53926304
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  53926265 aaaacgaaaaatttaatggacctttagatgcatttgacct 53926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 10618426 - 10618388
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  10618426 aaaacgaaaaacttaaaggacctttagatgcatttgacc 10618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 12748556 - 12748606
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttatta 209  Q
    |||||| |||| |||||| ||||||| ||||||||||||| ||||||||||    
T  12748556 aaaacgtaaaacttaaaggacctttaaatgcatttgacctattatttatta 12748606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 19229246 - 19229284
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  19229246 aaaacgaaaaacttaaaggacctttagatgcatttgacc 19229284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 21564692 - 21564738
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    ||||||||||| |||||| | ||||||||||||||||||||| ||||    
T  21564692 aaaacgaaaaacttaaaggatctttagatgcatttgacctttaattt 21564738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 32651105 - 32651147
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| |||||||||||||||| |||||||    
T  32651105 aaaacgaaaaacttaaaggacctttagatgcatttcacctttt 32651147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 33473524 - 33473574
Alignment:
Q  159 aaaacgaaaaatttaaa-gaacctttagatgcatttgaccttttatttatt 208  Q
    ||||||||||| ||||| |||| ||||||||||||||||| ||||||||||    
T  33473524 aaaacgaaaaacttaaaagaacatttagatgcatttgaccctttatttatt 33473574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 35608386 - 35608428
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||    
T  35608386 aaaacgaaaaacttaaaggaccgttagatgcatttgacctttt 35608428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 41250773 - 41250731
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||    
T  41250773 aaaacgaaaaacttaaaggacctttagatgcatttgacatttt 41250731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 50287422 - 50287376
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttattt 205  Q
    |||| |||||| |||||| ||||||||||||||||||||| ||||||    
T  50287422 aaaatgaaaaacttaaaggacctttagatgcatttgacctattattt 50287376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 21890366 - 21890407
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  21890366 aaaacgaaaaacttaaaggacttttagatgcatttgaccttt 21890407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 49799056 - 49799015
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  49799056 aaaacaaaaaacttaaaggacctttagatgcatttgaccttt 49799015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 49799348 - 49799389
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| || ||| |||||||||||||||||||||||    
T  49799348 aaaacgaaaaactttaaggacctttagatgcatttgaccttt 49799389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 53196209 - 53196246
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgac 196  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  53196209 aaaacgaaaaacttaaaggacctttagatgcatttgac 53196246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 22851852 - 22851812
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||| | ||||||||||||||||||||||    
T  22851852 aaaacgaaaaacttaacggacctttagatgcatttgacctt 22851812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 44152869 - 44152909
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  44152869 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 44152909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 55164400 - 55164440
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  55164400 aaaacgaaaaacttaaaggacctttagatgtatttgacctt 55164440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 1293343 - 1293301
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctttt 201  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  1293343 aaaacgaaaaacttaaagaacatttagatgcatttgacctttt 1293301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 9884712 - 9884671
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttt 200  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  9884712 aaaacgaaaaacttaaaggacctttagatgcatttgaccttt 9884671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 24430516 - 24430476
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  24430516 aaaacgaaaaacttaaaggacctttagatgcatttgacctt 24430476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 196
Target Start/End: Original strand, 1293689 - 1293720
Alignment:
Q  165 aaaaatttaaagaacctttagatgcatttgac 196  Q
    ||||||||||||||||||||||||||||||||    
T  1293689 aaaaatttaaagaacctttagatgcatttgac 1293720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 24430857 - 24430896
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  24430857 aaaacgaaaaacttaaaggacctttagatgcatttgacct 24430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 43468948 - 43468909
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  43468948 aaaacgaaaaacttaaaggacctttagatgcatttgacct 43468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 3875824 - 3875786
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  3875824 aaaacgaaaaacttaaaggacctttagatgcatttgacc 3875786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 22684244 - 22684282
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacc 197  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  22684244 aaaacgaaaaacttaaaggacctttagatgcatttgacc 22684282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 28496300 - 28496250
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatttatta 209  Q
    |||| ||||||||||||| || |||||||||||||||||||  ||||||||    
T  28496300 aaaatgaaaaatttaaaggacttttagatgcatttgaccttaaatttatta 28496250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 6016381 - 6016417
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  6016381 aaaacgaaaaacttaaaggacctttagatgcatttga 6016417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 7435058 - 7435094
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttga 195  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  7435058 aaaacgaaaaacttaaaggacctttagatgcatttga 7435094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 24193568 - 24193608
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    ||||||||||| |||||| ||||||| ||||||||||||||    
T  24193568 aaaacgaaaaacttaaaggacctttaaatgcatttgacctt 24193608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 33652037 - 33652077
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  33652037 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 33652077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 41536472 - 41536432
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacctt 199  Q
    |||| |||||| |||||| ||||||||||||||||||||||    
T  41536472 aaaatgaaaaacttaaaggacctttagatgcatttgacctt 41536432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 5381 - 5426
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgaccttttatt 204  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||||    
T  5381 aaaacgaaaaacttaaaggacctttagatgcatttgaccatttatt 5426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 2042 - 2081
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  2042 aaaacgaaaaatttaaaggaccttttgatgcatttgacct 2081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 14534 - 14495
Alignment:
Q  159 aaaacgaaaaatttaaagaacctttagatgcatttgacct 198  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  14534 aaaacgaaaaacttaaaggacctttagatgcatttgacct 14495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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