View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16597_high_14 (Length: 276)
Name: NF16597_high_14
Description: NF16597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16597_high_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 6292131 - 6291856
Alignment:
| Q |
1 |
tcatgctagagatttcgcctttgaaactaccggctgaaggagggtacgaagtttccaacactgctaaagaacttggtgtagaaacccaaatgtttgcgta |
100 |
Q |
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| T |
6292131 |
tcatgctagagatttcgcctttgaaactaccggctgaaggagggtacgaagtttccaacactgctaaagaacttggtgtagaaacccaaatgtttgcata |
6292032 |
T |
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| Q |
101 |
gcctaatttagctaaagcattgtagatattaatcaccgccggaacaagatgttgaagaagagttgtatcatcgtcggtgaaaacttcgttacctacttga |
200 |
Q |
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| T |
6292031 |
gcctaatttagctaaagcattgtagatattaatcaccgccggaacaagatgttgaagaagagttgtatcatcgtcggtgaaaacttcgttacctacttga |
6291932 |
T |
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| Q |
201 |
attccggtgatttttgtgttaggtaggtacggtatgatgcggctgttcacccattgaagtgcttgttgtggatcat |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6291931 |
attccggtgatttttgtgttaggtaggtacggtatgatgcggctgttcacccattgaagtgcttgttgtggatcat |
6291856 |
T |
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