View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16598_low_1 (Length: 625)

Name: NF16598_low_1
Description: NF16598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16598_low_1
NF16598_low_1
[»] chr2 (43 HSPs)
chr2 (15-505)||(14921496-14921977)
chr2 (278-491)||(18819158-18819371)
chr2 (242-502)||(24188455-24188713)
chr2 (251-505)||(21844231-21844485)
chr2 (241-505)||(25460367-25460628)
chr2 (276-505)||(17883970-17884202)
chr2 (251-505)||(21842602-21842858)
chr2 (278-505)||(21503985-21504214)
chr2 (385-505)||(25474591-25474711)
chr2 (264-371)||(27917566-27917672)
chr2 (382-505)||(9504497-9504622)
chr2 (382-505)||(9515863-9515988)
chr2 (31-171)||(18818894-18819033)
chr2 (401-503)||(27917452-27917555)
chr2 (32-170)||(34063625-34063762)
chr2 (263-337)||(39732121-39732195)
chr2 (385-505)||(18532946-18533066)
chr2 (408-504)||(35708375-35708471)
chr2 (377-452)||(30999348-30999423)
chr2 (314-503)||(18235720-18235912)
chr2 (388-505)||(20518667-20518784)
chr2 (385-505)||(41256778-41256898)
chr2 (419-505)||(23909068-23909154)
chr2 (356-436)||(31274389-31274471)
chr2 (385-475)||(1733688-1733777)
chr2 (253-343)||(17862842-17862931)
chr2 (428-489)||(19948942-19949003)
chr2 (263-337)||(31262423-31262497)
chr2 (15-94)||(27417122-27417201)
chr2 (569-607)||(14921394-14921432)
chr2 (29-75)||(22525698-22525744)
chr2 (251-344)||(15454071-15454163)
chr2 (408-503)||(24047945-24048044)
chr2 (275-315)||(31274325-31274365)
chr2 (23-82)||(16593622-16593681)
chr2 (29-156)||(17414961-17415088)
chr2 (251-334)||(24047785-24047868)
chr2 (15-97)||(18236159-18236241)
chr2 (420-505)||(22511471-22511557)
chr2 (277-315)||(25474485-25474523)
chr2 (569-602)||(25460692-25460725)
chr2 (21-82)||(25474219-25474280)
chr2 (21-82)||(30998953-30999014)
[»] chr4 (46 HSPs)
chr4 (54-504)||(29437676-29438129)
chr4 (241-504)||(19602217-19602483)
chr4 (276-505)||(33519508-33519739)
chr4 (353-504)||(18444758-18444910)
chr4 (386-504)||(27303311-27303428)
chr4 (15-144)||(31859710-31859839)
chr4 (281-505)||(22120145-22120371)
chr4 (332-505)||(1695311-1695481)
chr4 (275-505)||(7023633-7023867)
chr4 (276-504)||(4733180-4733410)
chr4 (382-494)||(10577042-10577156)
chr4 (251-333)||(26160265-26160347)
chr4 (385-505)||(9782507-9782627)
chr4 (385-501)||(24576923-24577037)
chr4 (276-505)||(39134195-39134426)
chr4 (21-171)||(13064608-13064758)
chr4 (377-505)||(47024159-47024287)
chr4 (353-505)||(26188305-26188459)
chr4 (267-505)||(17024335-17024571)
chr4 (382-464)||(5676775-5676857)
chr4 (387-449)||(17184088-17184150)
chr4 (251-504)||(31859303-31859546)
chr4 (380-505)||(25314651-25314775)
chr4 (377-505)||(51885205-51885333)
chr4 (275-343)||(12028460-12028528)
chr4 (27-167)||(20985179-20985319)
chr4 (15-82)||(17187349-17187416)
chr4 (408-463)||(21047797-21047852)
chr4 (251-350)||(21077722-21077821)
chr4 (264-430)||(13066195-13066364)
chr4 (408-505)||(20985020-20985118)
chr4 (21-123)||(33519212-33519314)
chr4 (29-82)||(34864167-34864220)
chr4 (251-315)||(10576924-10576988)
chr4 (251-371)||(23354039-23354158)
chr4 (382-505)||(32022341-32022466)
chr4 (251-344)||(34666236-34666329)
chr4 (382-501)||(12806369-12806488)
chr4 (29-97)||(21077423-21077491)
chr4 (15-82)||(12111199-12111265)
chr4 (454-505)||(22219353-22219404)
chr4 (54-97)||(23353833-23353876)
chr4 (393-493)||(10079587-10079689)
chr4 (377-505)||(10450888-10451016)
chr4 (326-371)||(17184175-17184220)
chr4 (397-500)||(34667288-34667393)
[»] chr5 (40 HSPs)
chr5 (242-505)||(18281618-18281884)
chr5 (251-492)||(7742306-7742548)
chr5 (276-504)||(19763299-19763529)
chr5 (263-493)||(20695093-20695325)
chr5 (278-494)||(20083975-20084193)
chr5 (377-505)||(24268670-24268797)
chr5 (377-505)||(24345300-24345427)
chr5 (263-505)||(16622046-16622289)
chr5 (255-505)||(12265011-12265260)
chr5 (244-350)||(23157349-23157455)
chr5 (21-179)||(23157578-23157736)
chr5 (251-432)||(18178591-18178772)
chr5 (382-494)||(17028849-17028962)
chr5 (382-504)||(24131212-24131336)
chr5 (377-504)||(20715159-20715286)
chr5 (251-475)||(22930416-22930642)
chr5 (276-447)||(31340817-31340987)
chr5 (393-475)||(15694640-15694722)
chr5 (359-505)||(17381411-17381560)
chr5 (241-318)||(25368079-25368157)
chr5 (382-494)||(18451651-18451764)
chr5 (15-156)||(19331686-19331827)
chr5 (385-504)||(12339444-12339563)
chr5 (23-78)||(7742745-7742800)
chr5 (382-461)||(25594105-25594184)
chr5 (372-505)||(22230318-22230452)
chr5 (16-92)||(19763747-19763823)
chr5 (250-318)||(23125497-23125565)
chr5 (387-437)||(26329531-26329581)
chr5 (251-300)||(30072573-30072622)
chr5 (15-90)||(17027704-17027778)
chr5 (15-82)||(18452683-18452750)
chr5 (15-82)||(26329941-26330007)
chr5 (251-337)||(17695029-17695115)
chr5 (54-100)||(18872905-18872951)
chr5 (397-475)||(31267670-31267748)
chr5 (384-425)||(17694937-17694978)
chr5 (377-505)||(24842262-24842390)
chr5 (251-344)||(25681049-25681142)
chr5 (278-318)||(22755442-22755482)
[»] chr8 (45 HSPs)
chr8 (241-505)||(18771373-18771640)
chr8 (251-503)||(30850462-30850715)
chr8 (242-505)||(11437841-11438106)
chr8 (277-504)||(5154252-5154479)
chr8 (263-505)||(28074953-28075199)
chr8 (380-504)||(6887612-6887738)
chr8 (242-489)||(30544171-30544424)
chr8 (276-505)||(27084978-27085207)
chr8 (251-505)||(24927261-24927518)
chr8 (263-504)||(24120723-24120963)
chr8 (253-505)||(12774270-12774525)
chr8 (242-367)||(18786125-18786250)
chr8 (15-175)||(11437596-11437756)
chr8 (377-504)||(13304978-13305105)
chr8 (21-165)||(13583304-13583452)
chr8 (263-505)||(32239730-32239970)
chr8 (307-494)||(13583030-13583220)
chr8 (263-504)||(15213167-15213403)
chr8 (383-505)||(28900732-28900853)
chr8 (377-474)||(22892678-22892776)
chr8 (253-505)||(23876395-23876649)
chr8 (330-505)||(24094689-24094863)
chr8 (301-504)||(29292355-29292560)
chr8 (15-172)||(30543937-30544095)
chr8 (393-505)||(29046712-29046824)
chr8 (15-92)||(29291946-29292023)
chr8 (382-505)||(12957092-12957216)
chr8 (15-82)||(28901221-28901287)
chr8 (251-337)||(5569748-5569833)
chr8 (382-463)||(16051748-16051830)
chr8 (28-94)||(22894391-22894457)
chr8 (382-505)||(28259949-28260071)
chr8 (15-136)||(32239464-32239585)
chr8 (15-75)||(28291979-28292039)
chr8 (370-504)||(28290776-28290908)
chr8 (15-112)||(31436649-31436742)
chr8 (444-505)||(14184566-14184628)
chr8 (21-82)||(13081806-13081867)
chr8 (21-82)||(14424684-14424745)
chr8 (21-82)||(16054476-16054537)
chr8 (30-82)||(16052148-16052200)
chr8 (353-437)||(23893652-23893736)
chr8 (278-318)||(26882745-26882785)
chr8 (35-167)||(27097588-27097720)
chr8 (30-82)||(28902280-28902332)
[»] chr1 (42 HSPs)
chr1 (241-502)||(21549090-21549351)
chr1 (240-505)||(52270627-52270903)
chr1 (241-505)||(25665194-25665461)
chr1 (395-504)||(19257371-19257481)
chr1 (15-178)||(26854096-26854258)
chr1 (15-179)||(21548824-21548989)
chr1 (261-423)||(25778197-25778361)
chr1 (15-179)||(52271020-52271183)
chr1 (278-504)||(34533109-34533337)
chr1 (382-505)||(50047671-50047796)
chr1 (382-493)||(14744864-14744976)
chr1 (377-505)||(12810738-12810866)
chr1 (251-492)||(15298291-15298534)
chr1 (278-501)||(11984631-11984855)
chr1 (386-505)||(30676014-30676133)
chr1 (22-125)||(25665598-25665701)
chr1 (260-505)||(31314006-31314253)
chr1 (382-505)||(15416445-15416570)
chr1 (257-419)||(25730934-25731098)
chr1 (251-331)||(27460460-27460540)
chr1 (241-323)||(26853912-26853994)
chr1 (277-505)||(23223856-23224084)
chr1 (240-474)||(23506216-23506452)
chr1 (382-500)||(9328581-9328699)
chr1 (15-82)||(11769865-11769932)
chr1 (15-82)||(25494360-25494427)
chr1 (35-97)||(19257662-19257724)
chr1 (385-505)||(11769408-11769529)
chr1 (377-505)||(26658068-26658195)
chr1 (419-505)||(23521140-23521226)
chr1 (278-344)||(25126927-25126993)
chr1 (29-82)||(30675674-30675727)
chr1 (30-82)||(18300874-18300926)
chr1 (449-501)||(25374199-25374251)
chr1 (15-74)||(25727788-25727847)
chr1 (15-74)||(25736196-25736255)
chr1 (15-82)||(50047351-50047418)
chr1 (395-500)||(9252077-9252182)
chr1 (326-393)||(23421139-23421207)
chr1 (21-82)||(12423786-12423847)
chr1 (15-75)||(9328344-9328403)
chr1 (21-93)||(23505939-23506010)
[»] chr7 (52 HSPs)
chr7 (241-505)||(24596402-24596669)
chr7 (251-493)||(5636657-5636903)
chr7 (310-504)||(5312186-5312383)
chr7 (241-505)||(30406014-30406280)
chr7 (278-464)||(4091936-4092123)
chr7 (241-505)||(9760540-9760808)
chr7 (241-505)||(9800982-9801249)
chr7 (241-452)||(9552586-9552800)
chr7 (251-494)||(22334702-22334948)
chr7 (15-175)||(30405770-30405929)
chr7 (240-350)||(4829268-4829378)
chr7 (278-504)||(18466987-18467216)
chr7 (391-504)||(2629934-2630047)
chr7 (21-179)||(24596780-24596936)
chr7 (377-505)||(21472359-21472487)
chr7 (357-505)||(15757981-15758131)
chr7 (390-505)||(315717-315833)
chr7 (377-475)||(7777531-7777628)
chr7 (397-505)||(26839609-26839717)
chr7 (393-504)||(20446807-20446918)
chr7 (396-505)||(9405267-9405376)
chr7 (372-505)||(20017555-20017688)
chr7 (296-505)||(21536955-21537164)
chr7 (377-501)||(7815886-7816010)
chr7 (382-505)||(3400411-3400535)
chr7 (296-420)||(2092863-2092988)
chr7 (401-503)||(11082144-11082244)
chr7 (16-75)||(20470688-20470747)
chr7 (15-82)||(21545698-21545765)
chr7 (15-82)||(29544696-29544763)
chr7 (382-452)||(7493862-7493932)
chr7 (402-505)||(21544299-21544400)
chr7 (251-505)||(21545264-21545515)
chr7 (385-504)||(7151461-7151580)
chr7 (15-75)||(7494873-7494932)
chr7 (401-504)||(23072921-23073025)
chr7 (386-462)||(23126710-23126786)
chr7 (391-505)||(20040231-20040345)
chr7 (377-505)||(7142628-7142760)
chr7 (29-82)||(20017143-20017196)
chr7 (21-82)||(20446384-20446445)
chr7 (366-458)||(18468177-18468269)
chr7 (412-505)||(7326392-7326487)
chr7 (391-505)||(20050384-20050498)
chr7 (37-127)||(4828986-4829076)
chr7 (370-436)||(17880419-17880485)
chr7 (280-318)||(21472264-21472302)
chr7 (29-82)||(10670446-10670499)
chr7 (58-134)||(4977641-4977716)
chr7 (278-318)||(20040416-20040456)
chr7 (278-318)||(20050569-20050609)
chr7 (569-601)||(21536860-21536892)
[»] chr3 (36 HSPs)
chr3 (241-503)||(18474642-18474910)
chr3 (382-505)||(14280696-14280820)
chr3 (242-498)||(26298220-26298478)
chr3 (263-503)||(21828608-21828852)
chr3 (278-505)||(11475335-11475564)
chr3 (356-505)||(8401811-8401963)
chr3 (382-505)||(22488276-22488399)
chr3 (241-503)||(19542500-19542766)
chr3 (21-179)||(18474352-18474509)
chr3 (251-503)||(19218602-19218856)
chr3 (251-504)||(10342207-10342463)
chr3 (392-505)||(26419343-26419458)
chr3 (372-505)||(5632021-5632154)
chr3 (21-111)||(19542966-19543056)
chr3 (15-93)||(19219071-19219149)
chr3 (266-344)||(33578223-33578301)
chr3 (382-505)||(27415702-27415825)
chr3 (264-371)||(19285562-19285667)
chr3 (382-505)||(33914010-33914132)
chr3 (395-504)||(11521775-11521884)
chr3 (397-475)||(28731064-28731142)
chr3 (262-371)||(22489621-22489730)
chr3 (382-505)||(2729002-2729122)
chr3 (241-350)||(20892102-20892212)
chr3 (392-505)||(25883651-25883764)
chr3 (398-505)||(23907695-23907804)
chr3 (21-82)||(25883285-25883346)
chr3 (385-503)||(19263295-19263415)
chr3 (251-331)||(26419202-26419282)
chr3 (55-127)||(27374275-27374347)
chr3 (396-505)||(33578358-33578469)
chr3 (277-315)||(11521658-11521696)
chr3 (21-82)||(10341969-10342030)
chr3 (31-76)||(11475039-11475084)
chr3 (15-72)||(28422629-28422685)
chr3 (251-311)||(16970898-16970958)
[»] scaffold0386 (2 HSPs)
scaffold0386 (277-494)||(11178-11397)
scaffold0386 (277-492)||(8150-8367)
[»] scaffold0337 (2 HSPs)
scaffold0337 (241-505)||(3581-3854)
scaffold0337 (30-104)||(1999-2073)
[»] scaffold0065 (2 HSPs)
scaffold0065 (241-505)||(12713-12987)
scaffold0065 (30-104)||(12435-12509)
[»] scaffold0011 (2 HSPs)
scaffold0011 (15-179)||(227961-228124)
scaffold0011 (382-441)||(227668-227729)
[»] scaffold0186 (1 HSPs)
scaffold0186 (382-505)||(33151-33275)
[»] chr6 (35 HSPs)
chr6 (263-505)||(22262843-22263086)
chr6 (251-505)||(9396001-9396264)
chr6 (385-505)||(9725592-9725712)
chr6 (384-505)||(17859887-17860009)
chr6 (357-505)||(1558244-1558394)
chr6 (382-493)||(15349300-15349409)
chr6 (382-493)||(15369296-15369405)
chr6 (383-505)||(19670021-19670143)
chr6 (382-505)||(30235778-30235899)
chr6 (382-463)||(15376020-15376101)
chr6 (382-475)||(15575529-15575621)
chr6 (15-97)||(26499703-26499785)
chr6 (251-333)||(32930051-32930133)
chr6 (21-82)||(17860320-17860381)
chr6 (277-426)||(16528129-16528279)
chr6 (251-505)||(26499261-26499515)
chr6 (392-505)||(15319421-15319535)
chr6 (382-505)||(30756220-30756348)
chr6 (382-418)||(15318651-15318687)
chr6 (390-505)||(15386496-15386612)
chr6 (383-505)||(16439932-16440056)
chr6 (391-505)||(15370060-15370175)
chr6 (30-133)||(24507263-24507366)
chr6 (21-82)||(15575106-15575167)
chr6 (382-505)||(16174758-16174883)
chr6 (266-313)||(12971952-12971999)
chr6 (15-82)||(30355493-30355560)
chr6 (392-501)||(13723277-13723387)
chr6 (389-435)||(15376317-15376363)
chr6 (251-337)||(17198383-17198469)
chr6 (385-493)||(28178575-28178684)
chr6 (382-505)||(10976473-10976598)
chr6 (387-416)||(15382276-15382305)
chr6 (10-75)||(33638257-33638322)
chr6 (15-75)||(33638383-33638443)
[»] scaffold0100 (1 HSPs)
scaffold0100 (382-475)||(37569-37662)
[»] scaffold0190 (2 HSPs)
scaffold0190 (256-493)||(11084-11324)
scaffold0190 (16-82)||(11569-11635)
[»] scaffold0855 (1 HSPs)
scaffold0855 (382-504)||(2430-2552)
[»] scaffold0847 (1 HSPs)
scaffold0847 (382-504)||(2595-2717)
[»] scaffold0650 (2 HSPs)
scaffold0650 (277-505)||(5143-5369)
scaffold0650 (15-75)||(5648-5707)
[»] scaffold0362 (1 HSPs)
scaffold0362 (377-502)||(8236-8361)
[»] scaffold0836 (1 HSPs)
scaffold0836 (55-113)||(2824-2882)
[»] scaffold0624 (1 HSPs)
scaffold0624 (398-505)||(4610-4717)
[»] scaffold0188 (1 HSPs)
scaffold0188 (15-75)||(26833-26893)
[»] scaffold0171 (1 HSPs)
scaffold0171 (15-82)||(21574-21641)
[»] scaffold0043 (1 HSPs)
scaffold0043 (32-127)||(58943-59037)
[»] scaffold1149 (1 HSPs)
scaffold1149 (30-132)||(1978-2080)
[»] scaffold0282 (1 HSPs)
scaffold0282 (385-505)||(22026-22146)
[»] scaffold0185 (1 HSPs)
scaffold0185 (18-82)||(2679-2743)
[»] scaffold0103 (1 HSPs)
scaffold0103 (382-501)||(36988-37107)


Alignment Details
Target: chr2 (Bit Score: 386; Significance: 0; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 15 - 505
Target Start/End: Complemental strand, 14921977 - 14921496
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  14921977 atgaagattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacagaagaacg 14921878  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcattgacaagggtagggagtgttgtttgcttgttttcc 214  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14921877 cttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcattgacaagggtagggagtgttgtttgcttgttttcc 14921778  T
Q  215 aatccnnnnnnngtgggnnnnnnnntctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattc 314  Q
    |||||       |||||        ||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  14921777 aatcctttttttgtgggaaaaaaaatctattttcactctcttaatccttaagtaatcattcactata---------ccttgcacactctttgattcattc 14921687  T
Q  315 agaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatccatctttctattgttctctctagggtatgtttttcaattgttt 414  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14921686 agaaggctagcggtaaaaggcaaaggtcaatcatcacgagtttcaaggcagaggatccatccttctattgttctctctagggtatgtttttcaattgttt 14921587  T
Q  415 tgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttcttatttgttggattctattaataaag 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14921586 tgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttcttatttgttggattctattaataaag 14921496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 278 - 491
Target Start/End: Original strand, 18819158 - 18819371
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatcc--atc 375  Q
    |||||||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||||| |||||| ||||| ||| ||| || |||||||||   |||    
T  18819158 tataaatagagacccttgcaaactcttttatttattcagaaagctaacggtacaaggcaatggtcaaacatca-aagcttccagacagaggatctctatc 18819256  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
     | || |||||||  |||||||||||||||| ||||||||||||||||| |||||| |||||||||| | ||||||| |||||||||||| ||||| |||    
T  18819257 ctcctcttgttcttactagggtatgtttttctattgttttgtaatgatgacggttgtcatgagcaactagacctctttgattagggttccacgatg-acc 18819355  T
Q  476 tttcttatttgttgga 491  Q
     |||||||||||||||    
T  18819356 cttcttatttgttgga 18819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 242 - 502
Target Start/End: Original strand, 24188455 - 24188713
Alignment:
Q  242 tattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggt 341  Q
    ||||||||||||||||| || | ||||||||| ||| ||||||||||||||||||| |||     ||||||||| || |||||||||||||||||| |||    
T  24188455 tattttcactctcttaacccctgagtaatcatacacaataaatagagacccttgcatact-----attcattcaaaaagctagcggtacaaggcaagggt 24188549  T
Q  342 caatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagc 439  Q
    |||  || |  || |||| || ||||||||  |||||| ||  | ||||||||||||| |||||||| ||| |||||  |||| ||||||||||||||||    
T  24188550 caaggattaagagcttcacggaagaggatcttcatcttactcatattctctctagggtgtgtttttctattattttgagatgacgtcggttgccatgagc 24188649  T
Q  440 aacaaaacctcttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaata 502  Q
    ||| |||||| || ||||| ||||||  ||||||| | ||||||||||||||||||||||||||    
T  24188650 aactaaacctgtttgattaaggttccatgatgaactccttcttatttgttggattctattaata 24188713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 505
Target Start/End: Complemental strand, 21844485 - 21844231
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| ||||| |||||||||| |||| ||||||| |||| ||| |||||| | ||||||||| |||||||  |||||| |||||    
T  21844485 tctcttaaaccctaagtaataattcaatataaatagaaacccctgcacacacttttatttattcagtaagctagcggttcaaggcatgggtcaagcatca 21844386  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     | | |||||||||||||||   |||  | || | ||||||| |||||| ||||||||  |||||||||||||||||  |||||||||  |||| |||||    
T  21844385 ga-gcttcaaggcagaggatttacatgctcctctcgttctctttagggtttgtttttc--ttgttttgtaatgatgtatgttgccatgtacaactaaacc 21844289  T
Q  449 tcttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaataaag 505  Q
    |||| ||||||||||||  ||||||| | |||||||||||||||||| ||||||||||    
T  21844288 tctttgattagggttccaagatgaactcattcttatttgttggattcaattaataaag 21844231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 25460367 - 25460628
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggct-agcggtacaaggcaaag 339  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||| ||||| ||| |||||||| ||| |  |||||||||||| |    
T  25460367 ctattttcactctcttaatccctaagtaatcatacactataaatagagaccttttcacaatcttttatttattcagaaagctaatgggtacaaggcaagg 25460466  T
Q  340 gtcaatcatcacaagtttcaaggcagagg--atccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    ||||| |||||         ||||| |||  ||||| | | || ||||||||||||| ||||||||||| |||||||||||||||| | | ||  ||||     
T  25460467 gtcaaacatca-------ggaggcaaaggatatccaccatcctcttgttctctctagtgtatgtttttctattgttttgtaatgattttgattttcatgc 25460559  T
Q  438 gcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    ||||| |||||| || |||||| ||| | |||||||  | |||||||||||| ||||||||||||||||    
T  25460560 gcaactaaacctatttgattagagtttcacgatgaatacgttcttatttgttagattctattaataaag 25460628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 276 - 505
Target Start/End: Complemental strand, 17884202 - 17883970
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggat--cca 373  Q
    |||||||||||||||| |||||||  |||| ||||||| |||| |||||  ||||||||||| |||||| ||||| | | |||||||||||||||  |      
T  17884202 actataaatagagaccattgcacatacttttattcatttagaaagctagtagtacaaggcaagggtcaagcatcaga-gattcaaggcagaggatttctg 17884104  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatga 472  Q
    || | || |||| || ||||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||   ||||    
T  17884103 tcatcctcttgtcctttctagggtatgtttttctattgttttgtaatgatgttggttgccatgtgcaactaaacctctcttgattagggttccaatatga 17884004  T
Q  473 acct-ttcttatttgttggattctattaataaag 505  Q
    |||| |||| ||||||  ||||| | ||||||||    
T  17884003 acctcttctcatttgtcagattcaactaataaag 17883970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 251 - 505
Target Start/End: Complemental strand, 21842858 - 21842602
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| ||||| |||||| ||| ||||||||| || |||| ||| |||||||| ||||| ||| |||||||  | |||| |||||    
T  21842858 tctcttaaaccctaagtaataattcaatataaacagaaacccttgcatacacttttatttattcagaaagctagaggttcaaggcatggttcaagcatca 21842759  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     | | ||||||||||| |||   |||  | || | ||||||| ||||||||| ||||  ||||||||||||||||||  |||||||||  |||| |||||    
T  21842758 ga-gcttcaaggcagatgatttacatgctcctctcgttctctttagggtatgcttttatattgttttgtaatgatgtatgttgccatgtacaactaaacc 21842660  T
Q  449 tcttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaataaag 505  Q
    |||| ||||||||||||  ||||||| | |||||||||||||||||| ||||||||||    
T  21842659 tctttgattagggttccaagatgaactcattcttatttgttggattcaattaataaag 21842602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 278 - 505
Target Start/End: Complemental strand, 21504214 - 21503985
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catc 375  Q
    |||||||||| |||||| ||||| |||| ||||||| |||| ||||  ||| ||||| ||||||||| ||||| ||||| ||||| ||| ||||  ||||    
T  21504214 tataaatagatacccttacacacacttttattcatttagaaagctaatggttcaaggaaaaggtcaagcatca-aagttccaaggtagatgatcttcatc 21504116  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-c 474  Q
     | ||||||||| |||||  ||||||||||| ||| |||| |||||||||  |||| | |||||||| |||||| || ||| ||| ||||  |||||| |    
T  21504115 ctcctattgttcactctaaagtatgtttttctattattttataatgatgtttgttgtcgtgagcaactaaacctttttgatcaggattccaagatgaacc 21504016  T
Q  475 ctttcttatttgttggattctattaataaag 505  Q
    |||||||||||| ||||||| ||||||||||    
T  21504015 ctttcttatttgatggattcaattaataaag 21503985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 385 - 505
Target Start/End: Original strand, 25474591 - 25474711
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttat 483  Q
    |||| |||||||||| |||||| |||||||||| |||||||| ||||||||||||||| ||||||||| ||||| |||||| ||||||| || |||||||    
T  25474591 ttctttctagggtatctttttctattgttttgttatgatgtctgttgccatgagcaactaaacctctt-gattatggttccacgatgaaccccttcttat 25474689  T
Q  484 ttgttggattctattaataaag 505  Q
    |||||| | | |||||||||||    
T  25474690 ttgttgaaatttattaataaag 25474711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 27917672 - 27917566
Alignment:
Q  264 aagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggc 363  Q
    ||||||||||  ||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||| |||||| |||||  || |||| ||     
T  27917672 aagtaatcatggactataa-tagagacccttgcacactattttattcattcagaaagctagcggtacaaggcaagggtcaagcatcaggagcttcatggt 27917574  T
Q  364 agaggatc 371  Q
    ||||||||    
T  27917573 agaggatc 27917566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 9504497 - 9504622
Alignment:
Q  382 ttgttctctctagggtatg-tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttc 479  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||  |||||||||  |||| ||||||||| ||||| |||||   |||||| || |||    
T  9504497 ttgttctctctagggtatgttttttccattgttttgttatgatgtttgttgccatgtacaactaaacctctttgattatggttctaagatgaatcccttc 9504596  T
Q  480 ttatttgttggattctattaataaag 505  Q
    ||||||||||||||| ||||| ||||    
T  9504597 ttatttgttggattccattaacaaag 9504622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 9515863 - 9515988
Alignment:
Q  382 ttgttctctctagggtatg-tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttc 479  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||  |||||||||  |||| ||||||||| ||||| |||||   |||||| || |||    
T  9515863 ttgttctctctagggtatgttttttccattgttttgttatgatgtttgttgccatgtacaactaaacctctttgattatggttctaagatgaatcccttc 9515962  T
Q  480 ttatttgttggattctattaataaag 505  Q
    ||||||||||||||| ||||| ||||    
T  9515963 ttatttgttggattccattaacaaag 9515988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 18818894 - 18819033
Alignment:
Q  31 aatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttga 130  Q
    ||||||||||||||||| | || |||||||||||||||||||||| ||| || || ||||||| |||  ||||||  ||||| || | |||||||| |||    
T  18818894 aatggttcttagaaggtctttgaagacaatacaaagtgaagaaaattcaattcaagttccaagacattgcaagacggaagaa-tgctcaaaaagggatga 18818992  T
Q  131 aaactgcataattcgcgcaggaggggctgcctcatgcgccc 171  Q
    |||||||| ||||||| || ||||  | |||||||||||||    
T  18818993 aaactgcaaaattcgcacaagaggcaccgcctcatgcgccc 18819033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 401 - 503
Target Start/End: Complemental strand, 27917555 - 27917452
Alignment:
Q  401 tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttcttatttgttggattctatta 499  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||  || ||| | | ||| |||||||||||||| ||||    
T  27917555 tttttctattgttttgtaatgatgtcggttgccatgagcaactaaacttctttgattaggtttcaacgttgatcaccttcctatttgttggattccatta 27917456  T
Q  500 ataa 503  Q
    ||||    
T  27917455 ataa 27917452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 34063762 - 34063625
Alignment:
Q  32 atggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttgaa 131  Q
    |||||| |||||||  || || |||||||||||||||||||||| ||||||||| |||||||||||    ||||  ||||||  | ||||||  || |||    
T  34063762 atggttattagaagacatttgaagacaatacaaagtgaagaaaattcatttgaagttccaaggcattgtgagacggaagaacgctagaaaaa-tgtcgaa 34063664  T
Q  132 aactgcataattcgcgcaggaggggctgcctcatgcgcc 170  Q
    |||||||||||| | ||||||| ||||||||||||||||    
T  34063663 aactgcataatttgtgcaggagaggctgcctcatgcgcc 34063625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 39732121 - 39732195
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaa 337  Q
    |||||||| || |||||||||||||||| ||| ||||| |||| |||||||||||| ||||||||||||||||||    
T  39732121 taagtaatgatgcactataaatagagactctttcacacacttttattcattcagaaagctagcggtacaaggcaa 39732195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 18533066 - 18532946
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttat 483  Q
    |||| |||||||||| ||||||  ||||||||| ||||||||  |||||||||||||| |||||||||  ||||||||||| |||| || || |||||||    
T  18533066 ttctgtctagggtatatttttcttttgttttgttatgatgtctattgccatgagcaactaaacctctt-tattagggttccacgataaaccccttcttat 18532968  T
Q  484 ttgttggattctattaataaag 505  Q
    |||||| | | |||||||||||    
T  18532967 ttgttgaaatttattaataaag 18532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 408 - 504
Target Start/End: Original strand, 35708375 - 35708471
Alignment:
Q  408 attgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaataaa 504  Q
    |||||||||| |||||||  ||||||||||||||| ||||||||| ||||| |||||| |||||||| | ||||||||||||||| | ||||||||||    
T  35708375 attgttttgttatgatgtatgttgccatgagcaactaaacctctt-gattaaggttccacgatgaactcattcttatttgttggaatttattaataaa 35708471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 377 - 452
Target Start/End: Original strand, 30999348 - 30999423
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctctt 452  Q
    |||| ||||||||||||||||||||||||| |||||||| | |||||||  ||||||||||| ||| |||||||||    
T  30999348 ttcttttgttctctctagggtatgtttttctattgttttcttatgatgtttgttgccatgagaaactaaacctctt 30999423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 314 - 503
Target Start/End: Complemental strand, 18235912 - 18235720
Alignment:
Q  314 cagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattg 411  Q
    ||||| ||||||||||||||| || |||||| |||||  || || |||| ||||||||  |||| |  | || ||||||||| |||||||||||| ||||    
T  18235912 cagaaagctagcggtacaaggtaagggtcaagcatcaagagatttaaggaagaggatctccatcctcttcttattctctctatggtatgtttttctattg 18235813  T
Q  412 ttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataa 503  Q
    |||||| |||||||  || |||||| | ||| |||||||| ||||||| | |||   |||||| || |||||||||||||||||| ||||||||    
T  18235812 ttttgt-atgatgtatgtagccatgtgaaactaaacctctatcgattacgattctaagatgaaactcttcttatttgttggattcaattaataa 18235720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 505
Target Start/End: Complemental strand, 20518784 - 20518667
Alignment:
Q  388 tctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttg 486  Q
    |||||| |||||| ||||| ||| |||||||||||||| |||  ||||||||||| ||||||| | |||||||||||  ||||||| || |||||||||     
T  20518784 tctctaaggtatgcttttctattattttgtaatgatgttggtgtccatgagcaactaaacctccttgattagggttctacgatgaaccccttcttattt- 20518686  T
Q  487 ttggattctattaataaag 505  Q
    ||||| || ||||||||||    
T  20518685 ttggaatcaattaataaag 20518667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 41256898 - 41256778
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc-tttcttat 483  Q
    |||||||| || |||||||||| |||||||| | ||||| |  ||||   |||||||  ||||||||| |||||||||||| ||||||||| ||||||||    
T  41256898 ttctctctcggatatgtttttctattgttttcttatgatatatgttgttgtgagcaattaaacctctt-gattagggttccacgatgaaccctttcttat 41256800  T
Q  484 ttgttggattctattaataaag 505  Q
    |||||||| | |||||||||||    
T  41256799 ttgttggaatttattaataaag 41256778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 505
Target Start/End: Complemental strand, 23909154 - 23909068
Alignment:
Q  419 atgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |||||||  ||||||||||||||| ||||||||| ||| |||||||| ||||||| || ||||||||||||||| | |||||||||||    
T  23909154 atgatgtatgttgccatgagcaactaaacctctt-gatcagggttccacgatgaatcccttcttatttgttggaatttattaataaag 23909068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 436
Target Start/End: Original strand, 31274389 - 31274471
Alignment:
Q  356 ttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatg 436  Q
    ||||||||||| ||||  || ||| || ||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||    
T  31274389 ttcaaggcagatgatcgccaacttcctcttgttctctctagagtatatttttctattgttttgtaatgatgtcgattgccatg 31274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 1733688 - 1733777
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    |||| ||||| |||||||||||  ||||||||| |||||||  |||| |||||||||| ||||||||| |||||||||| | |||||||||    
T  1733688 ttctttctagtgtatgtttttcttttgttttgttatgatgtatgttgtcatgagcaactaaacctctt-gattagggtttcacgatgaacc 1733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 17862842 - 17862931
Alignment:
Q  253 tcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtca 343  Q
    |||||| ||||||||||| || ||||||||||| ||||  |||||||| |||| |||||||||||| | ||| |||||||||||| |||||    
T  17862842 tcttaaaccttaagtaatgatgcactataaatatagacttttgcacacacttttattcattcagaa-gttagtggtacaaggcaagggtca 17862931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 428 - 489
Target Start/End: Complemental strand, 19949003 - 19948942
Alignment:
Q  428 gttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttg 489  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  19949003 gttgccatgagcaactaaacctctt-gattagggttccacgatgaatcctttcttatttgttg 19948942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 31262423 - 31262497
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaa 337  Q
    |||||||| || |||||||||||||||| |||| ||||||||| ||||||| ||||  ||| |||||||||||||    
T  31262423 taagtaatgatgcactataaatagagacacttgtacactcttttattcatttagaaatctaacggtacaaggcaa 31262497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 27417201 - 27417122
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaagg 94  Q
    |||||| ||||||  |||||||||| ||||||| | || | |||||||||||||||||||| |||||| || ||||||||    
T  27417201 atgaatgttgaagaccaatggttctaagaaggtttttgaaaacaatacaaagtgaagaaaattcatttcaagttccaagg 27417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 569 - 607
Target Start/End: Complemental strand, 14921432 - 14921394
Alignment:
Q  569 cttagatggagcaatattaagattgacaaccctcccttc 607  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  14921432 cttagatggagcaatattaagattgacaaccctcacttc 14921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 22525744 - 22525698
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||||||||||||||||||| || |||||| |||||||||||||||    
T  22525744 tcaatggttcttagaaggtatttgaagacaacacaaagtgaagaaaa 22525698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 251 - 344
Target Start/End: Complemental strand, 15454163 - 15454071
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaa 344  Q
    |||||||| || |||||||| ||  ||||||||| ||||||||||||||| |||| ||||||| ||||  |||| |||||||| ||| ||||||    
T  15454163 tctcttaaaccctaagtaatgatgaactataaatcgagacccttgcacacacttt-attcatttagaaacctaggggtacaagacaatggtcaa 15454071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 503
Target Start/End: Original strand, 24047945 - 24048044
Alignment:
Q  408 attgttttgtaatgatgtcggttgccatgagcaac--aaaacctct-tcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataa 503  Q
    |||| ||||||||||||||||||| |||| |||||  ||||||||| | ||||| ||||||  ||||||| | |||||||||||||||||| || |||||    
T  24047945 attgctttgtaatgatgtcggttgtcatgtgcaactaaaaacctctcttgattatggttccaagatgaacttattcttatttgttggattcaatcaataa 24048044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 31274325 - 31274365
Alignment:
Q  275 cactataaatagagacccttgcacactctttgattcattca 315  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  31274325 cactataaatagagacccttgcactctcttttattcattca 31274365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 16593681 - 16593622
Alignment:
Q  23 tgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| |||| ||||||||||||||   || |||||||||||||||||||||| ||||||    
T  16593681 tgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaagaaaattcattt 16593622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 17415088 - 17414961
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggtt 128  Q
    |||||||||||||| || ||| || |||||| | ||||||||||||| |||||| || ||| ||| |||  ||||||  ||||||  |  ||||||||      
T  17415088 tcaatggttcttaggagttatttgaagacaacaaaaagtgaagaaaattcatttcaagttctaagacattgcaagacggaagaacgctcaaaaaagggac 17414989  T
Q  129 gaaaactgcataattcgcgcaggagggg 156  Q
     |||||| |||||||||| |||||||||    
T  17414988 aaaaactacataattcgcacaggagggg 17414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 24047785 - 24047868
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaagg 334  Q
    |||||||| || |||||||| || |||||||||||||||  ||||||||| || | ||||||| |||| ||||| |||| ||||    
T  24047785 tctcttaaaccctaagtaatgatgcactataaatagagattcttgcacacactcttattcattgagaaagctagtggtataagg 24047868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 18236241 - 18236159
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcat 97  Q
    ||||| |||||||  ||||||||||||||||||   || |||||||||||  ||||||||| |||||| || ||| |||||||    
T  18236241 atgaagattgaaggccaatggttcttagaaggttgttgaagacaatacaagatgaagaaaattcatttcaagttcaaaggcat 18236159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 505
Target Start/End: Original strand, 22511471 - 22511557
Alignment:
Q  420 tgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |||||| |||| ||||||||||| |||| | || ||||||||||||  || ||| ||||| ||||||||| ||||| ||||||||||    
T  22511471 tgatgttggtttccatgagcaactaaacttatttgattagggttccatgaagaaccctttattatttgttagattccattaataaag 22511557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 25474485 - 25474523
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattca 315  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  25474485 ctataaatagagacccttgcacactattttattcattca 25474523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 25460692 - 25460725
Alignment:
Q  569 cttagatggagcaatattaagattgacaaccctc 602  Q
    ||||||| ||||||||||||||||||||||||||    
T  25460692 cttagatagagcaatattaagattgacaaccctc 25460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 25474219 - 25474280
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || |||||||| ||||||||||||| ||||||    
T  25474219 attgaaggtcaagggttcttagaaggttgttgaagacaatataaagtgaagaaaattcattt 25474280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 30998953 - 30999014
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || ||||||||||||||| |||||| ||||||    
T  30998953 attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtggagaaaattcattt 30999014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 4e-83; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 54 - 504
Target Start/End: Original strand, 29437676 - 29438129
Alignment:
Q  54 agacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttgaaaactgcataattcgcgcaggag 153  Q
    |||||||||||||||||||||  ||||||||| |||||||||||| ||||||| ||||||  |||||||| |||  ||||||| | |||| | |||||||    
T  29437676 agacaatacaaagtgaagaaacttcatttgaagttccaaggcatcgcaagacagaagaacgcttgaaaaatggtcaaaaactgtagaatttgtgcaggag 29437775  T
Q  154 gggctgcctcatgcgcccctgcgcattgacaagg----gtagggagtgttgtttgcttgttttccaatccnnnnnnngtgggnnnnnnnntctattttca 249  Q
    ||| |||||||||||||||  ||||| |||| ||    | ||| ||||  ||||||||||||||||| ||       ||||          |||||||||    
T  29437776 gggatgcctcatgcgcccca-cgcatggacacggacggggaggaagtgacgtttgcttgttttccaagccgtttttggtggaaaaacc---ctattttca 29437871  T
Q  250 ctctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatc 349  Q
    ||||||||| || ||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||  |||| |||||||||||| |||||| |||     
T  29437872 ctctcttaacccctaagtaatcatgcactataaatagagactcttgcacactcttgtattcattcagaaaactagtggtacaaggcaagggtcaagcatt 29437971  T
Q  350 acaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
    |  || |||||||  |||||||  |||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  29437972 aagagcttcaaggacgaggatctccatcattctcttgttatctctagggtatgtttttctattgttttgtaatgatgtcggtttccatgagcaactaaac 29438071  T
Q  448 ctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaa 504  Q
    ||||| |||||||||||| | ||||| |||||||||||||||||||||| ||||||||    
T  29438072 ctctttgattagggttccacaatgaaccctttcttatttgttggattcttttaataaa 29438129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 241 - 504
Target Start/End: Original strand, 19602217 - 19602483
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaagg 340  Q
    |||||||||||||||||| ||  |||||||||| || |||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||| ||    
T  19602217 ctattttcactctcttaaccccgaagtaatcatgcattataaatagagacccttgtacactctttttttcattcagaaagctagcggtacaaggcaaggg 19602316  T
Q  341 tcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgag 438  Q
     ||| |||||  || ||||||||||||||  || ||| | || ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19602317 ccaagcatcaggagcttcaaggcagaggatttctatcatccttttgttatctcgagggtatgtttttctattgttttgtaatgatgtcggttgccatgag 19602416  T
Q  439 caacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaa 504  Q
    |||| |||| |||| ||||||||||||  |||||| || |||| ||||||||||| |||||||||||    
T  19602417 caactaaacttctttgattagggttccatgatgaaccccttctcatttgttggatactattaataaa 19602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 276 - 505
Target Start/End: Original strand, 33519508 - 33519739
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggat--cca 373  Q
    |||||||||| ||||||||||||||||||| ||||||||||||  ||||| ||| ||||||| |||||| ||||| | | ||||||||| | |||  | |    
T  33519508 actataaataaagacccttgcacactcttttattcattcagaaatctagcagtataaggcaagggtcaaacatcaga-gcttcaaggcaaaagatatcta 33519606  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa 473  Q
    || | || ||||||||||| |||||| |||||| ||||| || |||||||||||||||||||  | ||| ||||||||| |||||||||| | || ||||    
T  33519607 tcatccttttgttctctcttgggtatatttttctattgtcttataatgatgtcggttgccatatgtaactaaacctctttgattagggtttcacgttgaa 33519706  T
Q  474 -cctttcttatttgttggattctattaataaag 505  Q
     || ||||||||||||  |||| ||||||||||    
T  33519707 ccccttcttatttgttaaattcaattaataaag 33519739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 353 - 504
Target Start/End: Original strand, 18444758 - 18444910
Alignment:
Q  353 agtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctc 450  Q
    ||||||||||| |||||||  |||| | || ||||||||  ||||||||||||||   ||||||||||||||||| ||| |||||||||||  |||| ||    
T  18444758 agtttcaaggcggaggatctccatcctcctcttgttctcattagggtatgtttttatgttgttttgtaatgatgttggt-gccatgagcaaataaacatc 18444856  T
Q  451 ttcgattagggttcctcgatgaacctttcttatttgttggattctattaataaa 504  Q
    || |||||||||||| ||||||| | ||||||||| |||||||| |||||||||    
T  18444857 tttgattagggttccacgatgaaaccttcttattttttggattcaattaataaa 18444910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 504
Target Start/End: Original strand, 27303311 - 27303428
Alignment:
Q  386 tctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttcttattt 485  Q
    |||||||| |||||||||||| || ||||| | ||||| ||| || ||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  27303311 tctctctatggtatgtttttctatagtttttttatgatatcgatttccatgagcaactaaacctctt-gattagggttccacgatgaacccttcttattt 27303409  T
Q  486 gttggattctattaataaa 504  Q
    |||||| | ||||||||||    
T  27303410 gttggaatttattaataaa 27303428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 31859839 - 31859710
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| | |||| || |||||||||||  ||||||  ||||||     
T  31859839 atgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagtgaagaaaatttatttcaagttccaaggcatttcaagacggaagaacg 31859740  T
Q  115 gttgaaaaagggttgaaaactgcataattc 144  Q
      ||||||| ||  |||||||||| |||||    
T  31859739 cgtgaaaaaaggacgaaaactgcaaaattc 31859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 505
Target Start/End: Original strand, 22120145 - 22120371
Alignment:
Q  281 aaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catcttt 378  Q
    |||||||||||||||||||| | || ||||||||||||  ||||| ||||||||||| |||||| ||||| | | | ||||||| | ||||  |||| |     
T  22120145 aaatagagacccttgcacacacatttattcattcagaatactagctgtacaaggcaagggtcaagcatcata-gctccaaggcatatgatctacatcctc 22120243  T
Q  379 ctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctt 477  Q
    || ||||| ||  ||||||||||||||  ||| ||||| ||||||||| ||| |||||| |||| || ||| || |||||||||| | |||||||| | |    
T  22120244 cttttgttatcgttagggtatgtttttatattattttgcaatgatgtcagtttccatgaacaactaagcctatttgattagggtttcacgatgaacacct 22120343  T
Q  478 tcttatttgttggattctattaataaag 505  Q
    ||||||||||||  ||| ||||||||||    
T  22120344 tcttatttgttgttttcaattaataaag 22120371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 332 - 505
Target Start/End: Complemental strand, 1695481 - 1695311
Alignment:
Q  332 aggcaaaggtcaatcatcacaagtttcaaggcagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttg 431  Q
    |||||||||| |||||||| |||||| ||||||||  || | || |||| |||||||||| |||||||||||||| |||||||||| | |||||  ||||    
T  1695481 aggcaaaggttaatcatca-aagttttaaggcaga--attcttcattctcttgttctctcgagggtatgtttttctattgttttgtcacgatgtttgttg 1695385  T
Q  432 ccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
     ||||| |||| ||||||||| ||||||||||||  |||||| || ||||||||||||| ||  |||||||||||    
T  1695384 tcatgaccaactaaacctctt-gattagggttccatgatgaaccccttcttatttgttgaatattattaataaag 1695311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 275 - 505
Target Start/End: Complemental strand, 7023867 - 7023633
Alignment:
Q  275 cactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--c 372  Q
    ||||| ||||||||||| |||||||| |||| ||||||| |||| | ||||  ||||||| || ||||||  | ||  || |||| |||||| ||||  |    
T  7023867 cactaaaaatagagaccattgcacacgcttttattcattgagaaagttagcaatacaaggaaagggtcaagtaccaggagcttcatggcagatgatctcc 7023768  T
Q  373 atctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatg 471  Q
    ||| | || | ||| ||||||| ||||||||||   |||||||||||||| ||||||| ||||| ||||| |||||||| | ||||| ||||||  ||||    
T  7023767 atcctcctttcgttttctctagtgtatgtttttatgttgttttgtaatgacgtcggtttccatgtgcaactaaacctctcttgattatggttccatgatg 7023668  T
Q  472 aa-cctttcttatttgttggattctattaataaag 505  Q
    || || |||||||||||||||||| ||||||||||    
T  7023667 aacccattcttatttgttggattcaattaataaag 7023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 276 - 504
Target Start/End: Original strand, 4733180 - 4733410
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--ca 373  Q
    |||||||||||| ||||||| ||||| ||| ||||| |||||| ||||   ||||||| ||| |||||| | | | | | ||||||||||| ||||  ||    
T  4733180 actataaatagaaacccttggacactgttttattcaatcagaaagctactagtacaagacaagggtcaaacgttaga-gcttcaaggcagatgatctcca 4733278  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa 473  Q
    || |  | ||||||| |||| |||||||||||| ||||||||||||| |  |  ||||||||| ||||| ||||||||| ||||||||| || |||||||    
T  4733279 tcctcttgttgttctttctaaggtatgtttttctattgttttgtaataagctttgttgccatgtgcaactaaacctctttgattagggtcccacgatgaa 4733378  T
Q  474 -cctttcttatttgttggattctattaataaa 504  Q
        |||||||||||||||||| |||||||||    
T  4733379 ttacttcttatttgttggattcaattaataaa 4733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 382 - 494
Target Start/End: Original strand, 10577042 - 10577156
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttc 479  Q
    |||| |||||||||||||||||||  ||||||||||||||||||  |||||||||  |||| |||||||| | || |||||||||  ||||||||| |||    
T  10577042 ttgtcctctctagggtatgtttttatattgttttgtaatgatgtttgttgccatgtccaactaaacctctattgactagggttccatgatgaacctcttc 10577141  T
Q  480 ttatttgttggattc 494  Q
    |||||||||||||||    
T  10577142 ttatttgttggattc 10577156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 26160265 - 26160347
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaag 333  Q
    |||||||| || |||||||| || | |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  26160265 tctcttaacccataagtaattatgccctataaatagagactcttgcacactcttttattcattcagaaagctagcggtacaag 26160347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 9782627 - 9782507
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttat 483  Q
    |||| |||||||||| ||| || |||||||||| |||||||  |||  |||||||||| ||||||||| |||||||||||| |||||||||  |||||||    
T  9782627 ttctttctagggtatatttgtctattgttttgttatgatgtatgtttgcatgagcaactaaacctctt-gattagggttccacgatgaaccccttcttat 9782529  T
Q  484 ttgttggattctattaataaag 505  Q
    |||||||| | |||||||||||    
T  9782528 ttgttggaatttattaataaag 9782507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 385 - 501
Target Start/End: Original strand, 24576923 - 24577037
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttcttatt 484  Q
    ||||||||||||||||||| || ||| |||||||||||  ||||||| |||||||||  |||||||||  | ||||||||| |||| ||||   ||||||    
T  24576923 ttctctctagggtatgtttctctattattttgtaatgacatcggttgtcatgagcaattaaacctctttaactagggttccacgataaacc--ccttatt 24577020  T
Q  485 tgttggattctattaat 501  Q
    |||||||||||||||||    
T  24577021 tgttggattctattaat 24577037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 276 - 505
Target Start/End: Complemental strand, 39134426 - 39134195
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatcc--a 373  Q
    |||||||||| ||||  |||||| | |||| ||| |||||||| |||| ||||| ||| ||||||||||| || | | |||  |||| ||||||||   |    
T  39134426 actataaatatagacttttgcacgcacttttatttattcagaaagctaacggtagaagacaaaggtcaattattaga-gttgtaaggaagaggatctcta 39134328  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa 473  Q
    || | |||||||||||| ||  ||||||||||| |||||||| |||||||||  | || |||| ||||  ||||||||| |||||  ||| | |||||||    
T  39134327 tcctcctattgttctctataatgtatgtttttctattgttttataatgatgtttgatgtcatgtgcaaataaacctctttgattaaagtttcacgatgaa 39134228  T
Q  474 cc-tttcttatttgttggattctattaataaag 505  Q
    || |||||||||||| |||||| ||||||||||    
T  39134227 ccatttcttatttgtaggattcaattaataaag 39134195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 13064608 - 13064758
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaa 120  Q
    ||||||||||||||||||||||| ||||| || ||||||| ||||||||| |||  | |||| || |||||| ||||||||||||  |||||| |   ||    
T  13064608 attgaagttcaatggttcttagagggtatttgaagacaattcaaagtgaacaaatttgatttcaagttccaatgcatcacaagacggaagaacgggcaaa 13064707  T
Q  121 aaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgccc 171  Q
    |||||   |||| |||| ||| || ||||||||||| ||||||||| ||||    
T  13064708 aaaggaccgaaagctgcctaaatcacgcaggaggggttgcctcatgtgccc 13064758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 377 - 505
Target Start/End: Complemental strand, 47024287 - 47024159
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct 476  Q
    |||| |||||||||||| ||||| |||||| |||||||||| |||||||  |||| ||||||| || |||||||||  |||||||||||  |||||| ||    
T  47024287 ttctcttgttctctctaaggtatatttttctattgttttgttatgatgtttgttgtcatgagctacgaaacctctt-aattagggttccaagatgaatct 47024189  T
Q  477 -ttcttatttgttggattctattaataaag 505  Q
     |||||||||||| |||  |||||||||||    
T  47024188 cttcttatttgtttgatattattaataaag 47024159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 505
Target Start/End: Original strand, 26188305 - 26188459
Alignment:
Q  353 agtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctc 450  Q
    |||| ||||||||||||||  |||| | || ||||||||| ||||||||||||| | |||||||||| | |||||  |||| ||||  |||| |||||||    
T  26188305 agttccaaggcagaggatcttcatcctcctcttgttctctatagggtatgtttt-ctattgttttgttacgatgtatgttgtcatgtacaactaaacctc 26188403  T
Q  451 ttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaataaag 505  Q
    || |||||||||||   ||||||| | |||||||||||||||| | ||||||||||    
T  26188404 tttgattagggttctaagatgaactccttcttatttgttggataccattaataaag 26188459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 505
Target Start/End: Complemental strand, 17024571 - 17024335
Alignment:
Q  267 taatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcaga 366  Q
    |||||||||||||||||||||||||||| ||| |  | | ||||||||||||   |  |||| |||||||| |||||| ||||  | | | ||||||| |    
T  17024571 taatcattcactataaatagagacccttacactcattattattcattcagaacattgacggttcaaggcaagggtcaagcatcgga-gctccaaggca-a 17024474  T
Q  367 ggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcct 466  Q
    |  | | ||||||| ||||||||||||||  ||||||||| || | ||| | |||||||  ||| ||||||||||| |||||||||  |||||||||||     
T  17024473 gatttcttctttctcttgttctctctaggaaatgtttttctatagctttattatgatgtttgtttccatgagcaactaaacctctt-tattagggttcca 17024375  T
Q  467 cgatgaa-cctttcttatttgttggattctattaataaag 505  Q
     |||||| |||||||||||| || |||  |||||||||||    
T  17024374 tgatgaaccctttcttatttttttgatattattaataaag 17024335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 464
Target Start/End: Original strand, 5676775 - 5676857
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttc 464  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||  ||||| ||| |||||  |||||||| |||||||||||    
T  5676775 ttgttctttctatggtatgtttttctattgttttgtaatgatgtatgttgctatgtgcaactgaacctctttgattagggttc 5676857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 17184150 - 17184088
Alignment:
Q  387 ctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacct 449  Q
    |||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||    
T  17184150 ctctctcgggtatgtttttctattgttttctaatgatgttggttgccatgagcaactaaacct 17184088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 251 - 504
Target Start/End: Complemental strand, 31859546 - 31859303
Alignment:
Q  251 tctcttaatccttaagtaatcattcact-ataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatc 349  Q
    |||||||| || |||||||| || |||| |||| |||||||||||||||||||||| ||||||||||||  ||||  ||||||||||  |||||| ||||    
T  31859546 tctcttaacccctaagtaatgatgcacttataagtagagacccttgcacactcttttattcattcagaaaactagatgtacaaggcaggggtcaaacatc 31859447  T
Q  350 acaagtttcaaggcagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacct 449  Q
    | | | ||            | |||| | || ||||||||   ||||||||| |||| |||||||||||||||| | ||||| |||| ||||| ||||||    
T  31859446 agaggatt------------ttcatcctcctcttgttctcatcagggtatgtctttctattgttttgtaatgatattggttgtcatgtgcaactaaacct 31859359  T
Q  450 cttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaa 504  Q
    ||| ||||| |||||| |||| || || || |||||| |||||||| | |||||||    
T  31859358 ctttgattaaggttccacgataaaccccttattattttttggattcaactaataaa 31859303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 505
Target Start/End: Complemental strand, 25314775 - 25314651
Alignment:
Q  380 tattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttc 479  Q
    ||||||||| ||||||||||||||||| |||||||| | |||||||  ||| |||  |||||| ||||||||   ||||||||||| ||||| ||| |||    
T  25314775 tattgttctgtctagggtatgtttttctattgttttcttatgatgtttgttaccacaagcaactaaacctctctaattagggttccacgatg-acccttc 25314677  T
Q  480 ttatttgttggattctattaataaag 505  Q
    | |||||||||| | ||| |||||||    
T  25314676 taatttgttggaatttatcaataaag 25314651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 51885205 - 51885333
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cc 475  Q
    |||| ||||||||| |||||||||||||||  ||||||| | |||||| | |||| ||||| |||| ||||||||| ||||||| |||| ||||||| ||    
T  51885205 ttcttttgttctctgtagggtatgtttttcttttgttttcttatgatgccagttgtcatgaacaactaaacctctt-gattaggtttccacgatgaaccc 51885303  T
Q  476 tttcttatttgttggattctattaataaag 505  Q
     ||||||||| ||||| | || ||||||||    
T  51885304 cttcttatttattggaatttaataataaag 51885333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 12028528 - 12028460
Alignment:
Q  275 cactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtca 343  Q
    |||||||||||||||| |||||||||||||| |||||||||||| | |||| ||||||| ||| |||||    
T  12028528 cactataaatagagactcttgcacactcttttattcattcagaaagttagcagtacaagacaatggtca 12028460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 20985319 - 20985179
Alignment:
Q  27 gttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaaggg 126  Q
    ||||||||||||||||||   || || |||||||||||||||||||||| ||||||||| || |||| ||   || |||  || |||  ||||||| |||    
T  20985319 gttcaatggttcttagaaaacatttgaagacaatacaaagtgaagaaaactcatttgaaatttcaagacaatgcatgacggaaaaacgcttgaaaatggg 20985220  T
Q  127 ttgaaaactgcataattcgcgcaggaggggctgcctcatgc 167  Q
    | ||||| |||| ||||||  ||||||||||| ||||||||    
T  20985219 tcgaaaattgcagaattcggacaggaggggctacctcatgc 20985179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 17187349 - 17187416
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| ||||||||||| ||||||||||||| ||| || |||||||||||||| ||||||| ||||||    
T  17187349 atgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaagtaaagaaaattcattt 17187416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 463
Target Start/End: Original strand, 21047797 - 21047852
Alignment:
Q  408 attgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggtt 463  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||||    
T  21047797 attgttttgtaatgatgttggttgccatgtgcaactaaacctctttgattagggtt 21047852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 350
Target Start/End: Original strand, 21077722 - 21077821
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| ||  ||||||||||||||||||||  |||| | | ||||||||| || ||||||| ||||||| || ||||||||||||    
T  21077722 tctcttaacccctaagtaatgatctactataaatagagacccttgtccactatcttattcattcaaaaagctagcgatacaaggtaagggtcaatcatca 21077821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 430
Target Start/End: Original strand, 13066195 - 13066364
Alignment:
Q  264 aagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatc-acaagtttcaagg 362  Q
    ||||||||||  ||||||||||||||| |||||  ||| ||| |||||||||||| | |||||||| |||||||  |||||  ||| |  |  |||||||    
T  13066195 aagtaatcataaactataaatagagactcttgcgtactattttattcattcagaaagttagcggtataaggcaagagtcaaatatcaaggatcttcaagg 13066294  T
Q  363 cagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggtt 430  Q
    || ||||  |||||| |  | ||||||| ||||||||||||||||| | | ||||||| |||||||||||    
T  13066295 cataggatctccatcctcgttttgttctttctagggtatgtttttctaatattttgtattgatgtcggtt 13066364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 408 - 505
Target Start/End: Complemental strand, 20985118 - 20985020
Alignment:
Q  408 attgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    ||||||||||||||||| ||||||  ||||| |||  ||||| || ||||||||||||  |||||| || |||||||||||||| |||| |||||||||    
T  20985118 attgttttgtaatgatgccggttgttatgagtaactgaacctatttgattagggttccatgatgaatcccttcttatttgttgggttcttttaataaag 20985020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 33519212 - 33519314
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaa 120  Q
    ||||||| ||||| ||||||||||||| | || |||||||||||  ||||||||| |||||| || |||||||||||  | ||||| ||||||  |||||    
T  33519212 attgaagatcaatcgttcttagaaggtctttgaagacaatacaagttgaagaaaattcatttcaaattccaaggcatttccagacagaagaacgcttgaa 33519311  T
Q  121 aaa 123  Q
    |||    
T  33519312 aaa 33519314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 34864220 - 34864167
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||    
T  34864220 tcaatggttcttagaaggtttttgtagacaatacaaaatgaagaaaattcattt 34864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 10576924 - 10576988
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattca 315  Q
    |||||||| || |||||| | || ||||||||||||||||||||||||||| |||| ||||||||    
T  10576924 tctcttaacccgtaagtatttatgcactataaatagagacccttgcacactatttggttcattca 10576988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 371
Target Start/End: Original strand, 23354039 - 23354158
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| ||  | |||||||| |||| || ||| ||||||| |||||||||||| || | | |||||||||||||||||| |||||    
T  23354039 tctcttaacccctaagtaatgatgtattataaataaagactctcgcaaactcttttattcattcagaaagccaacagtacaaggcaaaggtcaaacatca 23354138  T
Q  351 caagtttcaaggcagaggatc 371  Q
      || ||||| ||||||||||    
T  23354139 -gagcttcaaagcagaggatc 23354158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 32022341 - 32022466
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacctt-tc 479  Q
    ||||||||| |||| |||||| ||   |||||||||||||||||||||| ||||| | ||  ||||| || | |||||| ||||| |||||||||||  |    
T  32022341 ttgttctctttaggatatgttcttatgttgttttgtaatgatgtcggttaccatgtgtaattaaaccactcttgattagagttccacgatgaaccttcac 32022440  T
Q  480 ttatttgttggattctattaataaag 505  Q
    || |||| ||||||| ||||||||||    
T  32022441 ttctttgctggattcaattaataaag 32022466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 34666236 - 34666329
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaa 344  Q
    |||| ||||| ||||||||| || || ||||||||||||  |||||| ||  ||| ||||||||| || ||| ||||||||||||||| |||||    
T  34666236 tctcgtaatcattaagtaatgatgcattataaatagagattcttgcaaacattttcattcattcaaaaagctggcggtacaaggcaaatgtcaa 34666329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 501
Target Start/End: Complemental strand, 12806488 - 12806369
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    |||||||||||||| ||| |||||| |||||||||| |||||||   ||| |||||||||| |||| || | ||||||||| || | ||||| || |||     
T  12806488 ttgttctctctaggatatatttttctattgttttgttatgatgtttattgtcatgagcaactaaacttc-tggattagggtcccacaatgaaccccttcg 12806390  T
Q  481 tatttgttggattctattaat 501  Q
    ||||||||||||  |||||||    
T  12806389 tatttgttggatattattaat 12806369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 21077423 - 21077491
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcat 97  Q
    ||||||||||||||||||||   | |||||||||||| |||| |||| |||||| || |||||||||||    
T  21077423 tcaatggttcttagaaggtaatcgaagacaatacaaattgaataaaattcatttcaagttccaaggcat 21077491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 12111265 - 12111199
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    |||||||||||||| |||||||||||| ||||| | |  ||| |||||||||||||||||| ||||||    
T  12111265 atgaatattgaagt-caatggttcttataaggttttttaagataatacaaagtgaagaaaattcattt 12111199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 505
Target Start/End: Original strand, 22219353 - 22219404
Alignment:
Q  454 gattagggttcctcgatgaacctttcttatttgttggattctattaataaag 505  Q
    ||||||||||||  |||||||| ||||||||||||||||  |||||||||||    
T  22219353 gattagggttccaagatgaacccttcttatttgttggatattattaataaag 22219404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 23353833 - 23353876
Alignment:
Q  54 agacaatacaaagtgaagaaaaatcatttgaatttccaaggcat 97  Q
    |||||||||||||||||||||| |||||| || |||||||||||    
T  23353833 agacaatacaaagtgaagaaaattcatttcaagttccaaggcat 23353876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 493
Target Start/End: Complemental strand, 10079689 - 10079587
Alignment:
Q  393 agggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctc-ttcgattagggttcctcgatgaacct-ttcttatttgttgg 490  Q
    |||||||| ||||  ||||||||||||  ||||||||| ||||| | ||| ||||||| ||  |||||||||||| ||||||||| | |||||| |||||    
T  10079689 agggtatgcttttatattgttttgtaacaatgtcggttaccatgcgtaactaaacctcttttcattagggttcctagatgaacctctacttattggttgg 10079590  T
Q  491 att 493  Q
    |||    
T  10079589 att 10079587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 505
Target Start/End: Complemental strand, 10451016 - 10450888
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cc 475  Q
    |||| |||||||||||| || ||||||||| || ||||  | ||||| |  |||| ||||| |||| ||||||||| |||||||||||   |||||| ||    
T  10451016 ttcttttgttctctctaaggcatgtttttctatggtttcattatgatttatgttgtcatgaacaactaaacctctt-gattagggttctatgatgaaccc 10450918  T
Q  476 tttcttatttgttggattctattaataaag 505  Q
     || |||||||||||||  |||||||||||    
T  10450917 cttattatttgttggatattattaataaag 10450888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 371
Target Start/End: Complemental strand, 17184220 - 17184175
Alignment:
Q  326 ggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc 371  Q
    ||||||||||||||||||| |||||  || ||||||||||||||||    
T  17184220 ggtacaaggcaaaggtcaaacatcaggagcttcaaggcagaggatc 17184175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 500
Target Start/End: Original strand, 34667288 - 34667393
Alignment:
Q  397 tatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttcttatttgttggattc 494  Q
    ||||||||||  ||||||||||| ||||| || ||||||||||||  |||| | | | ||| ||||||||  ||||||||| | ||||||||||||||||    
T  34667288 tatgtttttcttttgttttgtaacgatgttggatgccatgagcaaataaacttgtcttgatcagggttccaagatgaacctctccttatttgttggattc 34667387  T
Q  495 tattaa 500  Q
     |||||    
T  34667388 aattaa 34667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 4e-61; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 242 - 505
Target Start/End: Complemental strand, 18281884 - 18281618
Alignment:
Q  242 tattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggt 341  Q
    ||||| ||||||||||| || ||||||||||| || ||||||||| ||||||||||||||||||  ||||||||||| |||||| || ||||||||| ||    
T  18281884 tatttccactctcttaacccctaagtaatcatgcaatataaatagtgacccttgcacactcttttcttcattcagaaagctagcagtgcaaggcaaacgt 18281785  T
Q  342 caatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagc 439  Q
    ||| |||||  || ||||||| ||||||  |||||| | || |||||||||||||||||| |||||| ||| || || |||||||||||||||||||||     
T  18281784 caaacatcaggagcttcaaggtagaggacctccatcgtcctcttgttctctctagggtatatttttctatttttatgcaatgatgtcggttgccatgagt 18281685  T
Q  440 aacaaaacctcttcgattagggttcctcgatgaacc-tttcttatttgttggattctattaataaag 505  Q
    ||| ||||||||| |||||| ||||| ||| |||||  |||||||||||||||||||||||||||||    
T  18281684 aactaaacctctttgattagcgttccacgacgaaccacttcttatttgttggattctattaataaag 18281618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 251 - 492
Target Start/End: Complemental strand, 7742548 - 7742306
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||| ||| || || |||||||||||||||||||||||||||| | ||||||| || | ||| |||||||||||| |||||| |||||    
T  7742548 tctcttaacccctaagcaatgatgcattataaatagagacccttgcacactcttttaatcattcaaaaagttagtggtacaaggcaagggtcaaacatca 7742449  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     ||| |||||| |||||||||  |||| | || ||||| |||| | ||||| |||||| | |||||| |||||||||| |||| |||| ||||| ||||     
T  7742448 -aagcttcaagtcagaggatcttcatcatcctcttgttttctcaatggtatatttttctactgttttctaatgatgtccgttgtcatgtgcaactaaact 7742350  T
Q  449 tcttcgattagggttcctcgatgaacctttcttatttgttggat 492  Q
    ||||  |||||||||||  |||||||| ||||||||||||||||    
T  7742349 tctttaattagggttccaagatgaacccttcttatttgttggat 7742306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 276 - 504
Target Start/End: Complemental strand, 19763529 - 19763299
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--ca 373  Q
    ||||||||||  |||||||  ||||||||| ||||||||| || ||||| |||||||||||| |||||| ||||| ||| ||||||||||||||||  ||    
T  19763529 actataaatatggacccttatacactcttttattcattcaaaaagctagtggtacaaggcaagggtcaaacatca-aagcttcaaggcagaggatcttca 19763431  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa 473  Q
    || | || |||||||||| |||||| ||||||| ||  |||| |||||||||  |||  ||||  |||| |||||||||  |||||||||||| ||||||    
T  19763430 tcctcctcttgttctctcaagggtaagtttttctatatttttataatgatgtttgttaacatgtacaactaaacctctttaattagggttccttgatgaa 19763331  T
Q  474 c-ctttcttatttgttggattctattaataaa 504  Q
    | | |||||||||||||||||| |||||||||    
T  19763330 ctccttcttatttgttggattcaattaataaa 19763299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 263 - 493
Target Start/End: Original strand, 20695093 - 20695325
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||| ||  ||||||||||||||| |||||| ||  ||| |||||||||||| ||||| |||| ||||||| |||||| |||| ||| || |||||    
T  20695093 taagtaatgatgtactataaatagagactcttgcaaaccttttcattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaactt-caagg 20695191  T
Q  363 cagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagg 460  Q
    ||  |||||  |||| |  | || |||||||||||||||||||||| ||||||||||||||||||  | ||||||| ||||| ||| ||||| |||||||    
T  20695192 caatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgctgccatgtgcaactaaaactctttgattagg 20695291  T
Q  461 gttcctcgatgaa-cctttcttatttgttggatt 493  Q
    ||||  ||||||| || |||||||||||||||||    
T  20695292 gttctacgatgaaccccttcttatttgttggatt 20695325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 278 - 494
Target Start/End: Original strand, 20083975 - 20084193
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatcc--atc 375  Q
    |||||||||| |||||| || ||||||| |||| || |||| ||||| ||||||| | ||||||||| ||||| || || ||||| ||| |||||  |||    
T  20083975 tataaatagataccctttcatactcttttattcttttagaaagctagaggtacaaagaaaaggtcaagcatcagaactt-caaggaagaagatcctcatc 20084073  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-c 474  Q
     | || ||||||||||||||||||||||||  ||| |||||||||||||   ||| ||||| ||||| ||| ||||| ||||||||||||  |||||| |    
T  20084074 atcctgttgttctctctagggtatgtttttatattattttgtaatgatggttgttaccatgtgcaactaaatctctttgattagggttccatgatgaacc 20084173  T
Q  475 ctttcttatttgttggattc 494  Q
    | ||||||||||||||||||    
T  20084174 ccttcttatttgttggattc 20084193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 24268670 - 24268797
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct 476  Q
    |||| ||||||||| ||||||||||||||  |||||||||| |||||||   |||||||||||||| ||||||||| ||||||| ||||   |||||||     
T  24268670 ttctcttgttctctttagggtatgtttttatattgttttgttatgatgtatattgccatgagcaactaaacctctt-gattaggattccaaaatgaaccc 24268768  T
Q  477 ttcttatttgttggattctattaataaag 505  Q
    ||||||||||||||||||| |||||||||    
T  24268769 ttcttatttgttggattctgttaataaag 24268797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 24345300 - 24345427
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct 476  Q
    |||| ||||||||| ||||||||||||||  |||||||||| |||||||   |||||||||||||| ||||||||| ||||||| ||||   |||||||     
T  24345300 ttctcttgttctctttagggtatgtttttatattgttttgttatgatgtatattgccatgagcaactaaacctctt-gattaggattccaaaatgaaccc 24345398  T
Q  477 ttcttatttgttggattctattaataaag 505  Q
    ||||||||||||||||||| |||||||||    
T  24345399 ttcttatttgttggattctgttaataaag 24345427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 263 - 505
Target Start/End: Complemental strand, 16622289 - 16622046
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    ||||||||||| || ||||||||||||| ||||||||  |||| ||| ||||| || ||||| ||| ||||||||  ||||| ||| | | ||| ||||     
T  16622289 taagtaatcatacattataaatagagactcttgcacatacttttatttattcataaagctagtggttcaaggcaagagtcaagcattaga-gttccaaga 16622191  T
Q  363 cagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagg 460  Q
    | |||| ||  |||| |||| ||||||||| ||||||||||||||| |||||||||| |||  ||  |||| |||| ||||| |||||||||  ||||||    
T  16622190 ctgagggtctccatccttctcttgttctctttagggtatgtttttctattgttttgttatggcgtatgttgtcatgtgcaactaaacctctttaattagg 16622091  T
Q  461 gttcctcgatgaacctttcttatttgttggattctattaataaag 505  Q
    ||||   || ||||| ||||| |||||||||||  ||||||||||    
T  16622090 gttcgaagaagaacccttcttgtttgttggatttcattaataaag 16622046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 255 - 505
Target Start/End: Complemental strand, 12265260 - 12265011
Alignment:
Q  255 ttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaag 354  Q
    |||| ||||||||||| |||  ||||||  ||||| ||||||||||  | | ||||||| |||| || |||||| ||||| || |||||| ||||| | |    
T  12265260 ttaaaccttaagtaattatttgctataataagagatccttgcacacaatattattcatttagaaagccagcggttcaaggtaatggtcaagcatcaga-g 12265162  T
Q  355 tttcaaggcagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcg 454  Q
    |||||||| || |  | | || |||| ||||||||||||| |||| |||||| ||||||||||||||||||   ||| |||||||||| ||||||||| |    
T  12265161 tttcaaggtag-gatttcttccttctcttgttctctctagtgtatatttttctattgttttgtaatgatgtgtattgtcatgagcaactaaacctctttg 12265063  T
Q  455 attagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |||||||||    |||||| || |||||||||  |||||||| |||||||||    
T  12265062 attagggttataagatgaaccccttcttatttaatggattctcttaataaag 12265011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 23157455 - 23157349
Alignment:
Q  244 ttttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtca 343  Q
    ||||||||||||||| || ||||||||||| || |||||| ||||||||||||||||| ||| |||||||||||| | | || ||||||||||| |||||    
T  23157455 ttttcactctcttaacccctaagtaatcatgcattataaaaagagacccttgcacactattttattcattcagaaagttggcagtacaaggcaagggtca 23157356  T
Q  344 atcatca 350  Q
    | |||||    
T  23157355 agcatca 23157349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 23157736 - 23157578
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaa 120  Q
    ||||||||||||||||||||| ||||||| |  |||||| | ||||||||||||  |||||| || ||||||||  |  ||||||| ||||||   ||||    
T  23157736 attgaagttcaatggttcttataaggtatttaaagacaacagaaagtgaagaaagttcatttaaagttccaaggttttgcaagacagaagaacgcgtgaa 23157637  T
Q  121 aaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcat 179  Q
    ||||||| ||||||||   |||| |||||||| | ||| ||||||||||||||||||||    
T  23157636 aaagggtcgaaaactgttgaatttgcgcaggatgagctacctcatgcgcccctgcgcat 23157578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 432
Target Start/End: Original strand, 18178591 - 18178772
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| || || ||| |||||||||||||||||||| ||| ||||||||| || ||||  |||||||||||| |||||| |||||    
T  18178591 tctcttaacccctaagtaatgatgcaatatcaatagagacccttgcacacttttttattcattcaaaaagctaatggtacaaggcaatggtcaaacatca 18178690  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgc 432  Q
      || || ||||  |||||||  |||| | || |||||||||||||||||| |||||  ||||||||||||| ||||| |||||    
T  18178691 -gagcttaaaggtggaggatcttcatcctcctcttgttctctctagggtat-tttttttattgttttgtaataatgtcagttgc 18178772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 494
Target Start/End: Original strand, 17028849 - 17028962
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttct 480  Q
    ||||||||| |||||||| |||||| |||| |||||||||||||  ||| ||||| ||||| ||||||||| ||| |||||||   ||||||||| ||||    
T  17028849 ttgttctctttagggtatatttttctattgatttgtaatgatgtatgttaccatgtgcaactaaacctctttgatcagggttctaagatgaacctcttct 17028948  T
Q  481 tatttgttggattc 494  Q
    ||||||||||||||    
T  17028949 tatttgttggattc 17028962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 382 - 504
Target Start/End: Original strand, 24131212 - 24131336
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttc 479  Q
    |||||||||||||| |||| ||||  ||| ||||||||||||||||||| ||||| | ||| |||||||| | |||| |||||||  ||||||||| ||     
T  24131212 ttgttctctctaggatatgcttttatattattttgtaatgatgtcggttaccatgtgaaactaaacctctcttgattggggttccaagatgaacctctta 24131311  T
Q  480 ttatttgttggattctattaataaa 504  Q
    ||||||||||||||| |||||||||    
T  24131312 ttatttgttggattcaattaataaa 24131336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 504
Target Start/End: Original strand, 20715159 - 20715286
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-c 475  Q
    |||| ||||||||| || | |||||||||| ||||||||||  ||||||  |||| | |||||||| ||||||||| |||||||||| |  ||||||| |    
T  20715159 ttctcttgttctctatatgatatgtttttctattgttttgttttgatgtttgttgtcttgagcaaccaaacctctt-gattagggtttcaagatgaactc 20715257  T
Q  476 tttcttatttgttggattctattaataaa 504  Q
    |||||||||||||||||  ||||||||||    
T  20715258 tttcttatttgttggatattattaataaa 20715286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 475
Target Start/End: Original strand, 22930416 - 22930642
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| | ||| ||||| || ||||||||||| | | |||| ||| |||||| ||||||||| || | || | ||||||||||| |||||| ||| |    
T  22930416 tctcttaacctttaggtaatgatgcactataaataaacatccttacaccctcttttattcattcataaaggtaccagtacaaggcaagggtcaaacataa 22930515  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     |  ||| |||| ||||||||  |||| | || ||||| |||||||| |||||||||| ||||||||||||||||||  | |  | || |||||||||||    
T  22930516 gagcttt-aaggtagaggatctccatcctccttttgttatctctaggttatgtttttctattgttttgtaatgatgtatgctatcgtgtgcaacaaaacc 22930614  T
Q  449 tct-tcgattagggttcctcgatgaacc 475  Q
    ||| | ||||| |||||| |||||||||    
T  22930615 tctcttgattaaggttccacgatgaacc 22930642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 447
Target Start/End: Complemental strand, 31340987 - 31340817
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagagga--tcca 373  Q
    |||||||||||||||||||||||||||||  |||||||| ||| |||||   ||||| |||| |||||| ||||  ||| ||||||||||||||  || |    
T  31340987 actataaatagagacccttgcacactcttaaattcattctgaaagctagatatacaaagcaagggtcaaacatc-gaagcttcaaggcagaggatctcaa 31340889  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
    || |  | |||||||||||    |||||||||| ||||||||||||||||||  |||| |||| ||||| ||||    
T  31340888 tcctcttcttgttctctct--tatatgtttttctattgttttgtaatgatgtatgttgtcatgtgcaactaaac 31340817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 15694722 - 15694640
Alignment:
Q  393 agggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||| | ||  ||||||||| |||||||||||| | |||||||    
T  15694722 agggtatatttttctattgttttgtaatgatgtcagttgccatgtgaaattaaacctctttgattagggttccacaatgaacc 15694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 505
Target Start/End: Complemental strand, 17381560 - 17381411
Alignment:
Q  359 aaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgat 456  Q
    |||||||||||||  |||| | || |||||||||||||||||||| |||  |||||||| |||||||||  ||||||||  ||||| |||||||||  ||    
T  17381560 aaggcagaggatctccatcctccttttgttctctctagggtatgtatttatattgttttataatgatgtttgttgccatatgcaactaaacctctttaat 17381461  T
Q  457 tagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |  | || |  |||||| || |||||||||||||||||| ||||||||||    
T  17381460 ttagttttcaagatgaatcccttcttatttgttggattcaattaataaag 17381411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 25368079 - 25368157
Alignment:
Q  241 ctattttcactctcttaatcct-taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaa 318  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||||||||| ||||||||| ||| ||||||| ||||    
T  25368079 ctattttcactctcttaaccctgtacgtaatcatgcactataaatagagaccattgcacactattttattcatttagaa 25368157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 382 - 494
Target Start/End: Complemental strand, 18451764 - 18451651
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    |||||||||||||| |||||||||| ||||||||||  | ||||| |||  |||||||||| |||||||||  ||||||||     |||||| |||||||    
T  18451764 ttgttctctctaggatatgtttttctattgttttgtttttatgtctgttttcatgagcaactaaacctctttaattagggtgataagatgaaccctttct 18451665  T
Q  481 tatttgttggattc 494  Q
    ||||||||||||||    
T  18451664 tatttgttggattc 18451651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 19331686 - 19331827
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| |||||| ||||||| || |||||||  || || ||||||||||| ||||||| || ||||||||| ||  ||| |||  ||| ||| ||||||     
T  19331686 atgaagattgaaattcaatgatttttagaagacatttgaagacaatacaatgtgaagataagtcatttgaagttataagacattgcaaaacagaagaacg 19331785  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggagggg 156  Q
     |||||||| ||| |||||||||||||||| | |||||||||    
T  19331786 tttgaaaaaaggtcgaaaactgcataattcactcaggagggg 19331827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 504
Target Start/End: Complemental strand, 12339563 - 12339444
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttat 483  Q
    |||| ||||||| ||| ||||| ||| |||||| ||||| |  ||||||||||||||| || |||||| |||||||||||| ||||||| || |||||||    
T  12339563 ttctttctagggcatggttttctattattttgttatgatctttgttgccatgagcaactaatcctctt-gattagggttccacgatgaaccccttcttat 12339465  T
Q  484 ttgttggattctattaataaa 504  Q
    || ||||| | ||||||||||    
T  12339464 ttattggaatttattaataaa 12339444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 7742800 - 7742745
Alignment:
Q  23 tgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatc 78  Q
    ||||| ||||||||||||||||||| | || |||||||||||||||||||||||||    
T  7742800 tgaagatcaatggttcttagaaggtctttgaagacaatacaaagtgaagaaaaatc 7742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 461
Target Start/End: Complemental strand, 25594184 - 25594105
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattaggg 461  Q
    |||||||||||| | |||||||||| |||||||||| |||||||  ||||| ||||| ||| ||||||||| ||||||||    
T  25594184 ttgttctctctaagatatgtttttctattgttttgttatgatgtttgttgcaatgagtaactaaacctctttgattaggg 25594105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 372 - 505
Target Start/End: Original strand, 22230318 - 22230452
Alignment:
Q  372 catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatg 471  Q
    |||| |||| ||||||| ||||||||||||||||| | |||||| | |||||||  ||| ||| ||||||| |||||| ||  ||||| ||||| |||||    
T  22230318 catccttcttttgttctatctagggtatgtttttctactgttttcttatgatgtttgtttccacgagcaactaaaccttttttattagagttccacgatg 22230417  T
Q  472 aa-cctttcttatttgttggattctattaataaag 505  Q
    || || ||  ||||||||||| | |||||||||||    
T  22230418 aaccccttgctatttgttggaatttattaataaag 22230452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 19763823 - 19763747
Alignment:
Q  16 tgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaa 92  Q
    |||| ||||||| |||| |||||||||||||| | || ||| |||||||||||||||||| |||||| || ||||||    
T  19763823 tgaagattgaagatcaagggttcttagaaggtttttgaagataatacaaagtgaagaaaattcatttcaagttccaa 19763747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 23125565 - 23125497
Alignment:
Q  250 ctctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaa 318  Q
    |||||||||||| ||||||| || |  ||||||||||||||||||||||| | ||| ||||||||||||    
T  23125565 ctctcttaatccctaagtaaccaatggctataaatagagacccttgcacaatattttattcattcagaa 23125497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 26329581 - 26329531
Alignment:
Q  387 ctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    |||||||||||||||||||| |||||||||| |||||||  ||||||||||    
T  26329581 ctctctagggtatgtttttctattgttttgttatgatgtttgttgccatga 26329531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 30072573 - 30072622
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacac 300  Q
    |||||||| ||||||||||||||| | |||||||||||||||||| ||||    
T  30072573 tctcttaaaccttaagtaatcatttaatataaatagagacccttgtacac 30072622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 17027704 - 17027778
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttcc 90  Q
    ||||| ||||||||| |||| ||||||||||||   || |||||||||||||||||||||| | |||| |||||||    
T  17027704 atgaagattgaagtt-aatgcttcttagaaggttcttgaagacaatacaaagtgaagaaaattaatttcaatttcc 17027778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 18452750 - 18452683
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| ||||||| ||||||||||||| ||||| | |  | |||||||||||||||||||| ||||||    
T  18452750 atgaaaattgaagatcaatggttcttataaggttttttaaaacaatacaaagtgaagaaaattcattt 18452683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 26330007 - 26329941
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| |||||||| ||||||| |||||||||| | |  |||||||||||||||||||||| ||||||    
T  26330007 atgaagattgaagt-caatggtccttagaaggttttttaagacaatacaaagtgaagaaaattcattt 26329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 17695115 - 17695029
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaa 337  Q
    |||||||| || |||||||| || |||||||||||||||  ||||||| | |||| ||||||||| || | |||  |||||||||||    
T  17695115 tctcttaaaccctaagtaatgatgcactataaatagagagtcttgcacgcacttttattcattcaaaaagttagatgtacaaggcaa 17695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 18872951 - 18872905
Alignment:
Q  54 agacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcac 100  Q
    |||||||||||| ||||||||| ||||||||| ||||||| ||||||    
T  18872951 agacaatacaaattgaagaaaattcatttgaagttccaagacatcac 18872905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 31267748 - 31267670
Alignment:
Q  397 tatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    |||||||||  ||| |||| |||||||||| ||| ||||| | ||| |||| |||| |||||||||||| |||||||||    
T  31267748 tatgttttttgattattttataatgatgtcagttaccatgtgaaactaaacatctttgattagggttccacgatgaacc 31267670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 17694978 - 17694937
Alignment:
Q  384 gttctctctagggtatgtttttcaattgttttgtaatgatgt 425  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||    
T  17694978 gttctttctagggtatgttattctattgttttgtaatgatgt 17694937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 24842262 - 24842390
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cc 475  Q
    |||| ||||||||||||  ||||| ||||| |||||||||| ||||| |  |||| ||||| |||  |||| |||| ||||||||||||  |||||| ||    
T  24842262 ttctcttgttctctctatagtatgcttttctattgttttgttatgatatatgttgtcatgaacaagtaaacatctt-gattagggttccaagatgaaccc 24842360  T
Q  476 tttcttatttgttggattctattaataaag 505  Q
     |||||||||| || ||  |||||||||||    
T  24842361 cttcttatttgatgaatattattaataaag 24842390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 25681049 - 25681142
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaa 344  Q
    |||||||| || |||| |||||||  |||||||||||||| |||||||||  | | | | |||||||| ||||| ||| |||||||| ||||||    
T  25681049 tctcttaaaccctaagaaatcatttgctataaatagagacacttgcacacattattaattattcagaaagctagtggttcaaggcaagggtcaa 25681142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 22755442 - 22755482
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaa 318  Q
    ||||||||||||| |||||||||| ||| ||||||||||||    
T  22755442 tataaatagagactcttgcacactattttattcattcagaa 22755482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 2e-54; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 18771373 - 18771640
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaagg 340  Q
    ||||||||||||||||||||| | ||||||||| |||| | |||||||||||||||||||||||| ||||||| ||||  | | || |||||||||| ||    
T  18771373 ctattttcactctcttaatccctcagtaatcatacactcttaatagagacccttgcacactcttttattcatttagaaatccatcgatacaaggcaatgg 18771472  T
Q  341 tcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgag 438  Q
    |||| |||||  || ||||||| ||| ||  |||||| |  | ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||     
T  18771473 tcaagcatcaggagcttcaaggtagatgatctccatcctcattttgttctctctagagtatctttttctattgttttgtaatgatgtcggttgccatgat 18771572  T
Q  439 caacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
     ||| || |||||| ||||||| |||| ||||||| || ||||||||||||||||||| |||||||||    
T  18771573 aaactaatcctctttgattaggattccacgatgaagcccttcttatttgttggattcttttaataaag 18771640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 251 - 503
Target Start/End: Complemental strand, 30850715 - 30850462
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| ||| | | ||||||||||||| |||| | ||||| |||||||||||| |||||||||||||||||| |||||| ||| |    
T  30850715 tctcttaacccctaagtaatgatt-attgtaaatagagacccatgcaaattcttttattcattcagaaagctagcggtacaaggcaagggtcaaacataa 30850617  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     |  ||| |||||||||||||  |||| | |||||||||||||||||||||||||||| |||||||||||||| |||  |||| |||| ||||| |||||    
T  30850616 gagattt-aaggcagaggatctccatcctcctattgttctctctagggtatgtttttctattgttttgtaatgttgttagttgtcatgtgcaactaaacc 30850518  T
Q  449 tcttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaataa 503  Q
    |||| ||||| |||| |  ||||||| | ||||||||| || |||||  |||||||    
T  30850517 tctttgattaaggtttcaagatgaactccttcttatttttttgattcatttaataa 30850462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 242 - 505
Target Start/End: Original strand, 11437841 - 11438106
Alignment:
Q  242 tattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggt 341  Q
    |||||||||||| |||| || |||||||| || ||  ||||||| ||||| || |||||| ||| ||||||| |||| |||||  ||||||||||| |||    
T  11437841 tattttcactctgttaacccctaagtaatgatgcatcataaatatagaccattacacactattttattcatttagaaagctagtagtacaaggcaagggt 11437940  T
Q  342 caatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagc 439  Q
    ||| |||||  || ||||| ||||||||  |||||| |||| ||||||||| ||||||||||||||  ||||| ||||||||||||   || ||||| ||    
T  11437941 caagcatcatgagcttcaaagcagaggatctccatccttctcttgttctctgtagggtatgtttttttattgtcttgtaatgatgtatatttccatgtgc 11438040  T
Q  440 aacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    ||| || | |||| ||||| ||||   ||||||| || |||||||||||||||||||||||||||||    
T  11438041 aactaagcatctttgatta-ggtttaacgatgaaccccttcttatttgttggattctattaataaag 11438106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 277 - 504
Target Start/End: Original strand, 5154252 - 5154479
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--cat 374  Q
    ||||||||||| || |  |||||||||||  ||||||||||| |||  | ||||||||||| || ||| ||||| || ||| |||| ||||||||  |||    
T  5154252 ctataaatagaaacacccgcacactcttttgttcattcagaaagcttacagtacaaggcaagggccaaccatcagaacttt-aaggtagaggatctccat 5154350  T
Q  375 ctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa- 473  Q
    | |||| |||||| ||||| ||||| ||||||  |||||||| |||||||||||||| |||||||||| |||||| || ||||| |||||| |||||||     
T  5154351 ccttcttttgttcactctacggtatatttttc--ttgttttgcaatgatgtcggttgtcatgagcaactaaacctatttgattaaggttccacgatgaac 5154448  T
Q  474 cctttcttatttgttggattctattaataaa 504  Q
    || || ||||||||||||||| |||||||||    
T  5154449 cccttattatttgttggattcaattaataaa 5154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 263 - 505
Target Start/End: Original strand, 28074953 - 28075199
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||| || ||||||||||||||||| ||| ||||| ||| ||||||||||||||||||| ||| ||| ||| |||||| ||||| || ||| | ||    
T  28074953 taagtaattatgcactataaatagagacctttgtacactattttattcattcagaaggctagcagtataagacaagggtcaaacatcataacttt-atgg 28075051  T
Q  363 cagagga--tccatctttctattgttctctctagggtatgtttttca-attgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgatta 458  Q
    |||||||  || ||| | || |||||||  ||||||||||||||| | |||||||||||||||| ||  |||||||| | ||| ||| ||||   |||||    
T  28075052 cagaggatctctatcctcctcttgttcttactagggtatgttttttatattgttttgtaatgatatcacttgccatgtggaactaaatctctcatgatta 28075151  T
Q  459 gggttcctcgatgaac-ctttcttatttgttggattctattaataaag 505  Q
    ||||||| |||||||| | ||||||||| |||||||| ||||||||||    
T  28075152 gggttccacgatgaactccttcttatttattggattcaattaataaag 28075199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 504
Target Start/End: Complemental strand, 6887738 - 6887612
Alignment:
Q  380 tattgttctctctagggtatgtttttca-attgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-t 477  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||| ||| |    
T  6887738 tattgttctatctaaggtatgtttttcctattgttttgtaatgatgtcggttgccatgtgcaactaaacctctttgattagggttccacgatgatcctct 6887639  T
Q  478 tcttatttgttggattctattaataaa 504  Q
    || ||||||||| |||| |||||||||    
T  6887638 tcatatttgttgaattcaattaataaa 6887612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 242 - 489
Target Start/End: Original strand, 30544171 - 30544424
Alignment:
Q  242 tattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcag--aaggctagcggtacaaggcaaag 339  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||||||||| ||||||| ||  |||||||| ||| ||||||||      
T  30544171 tattttcactctcttaacccctaagtaatcatacactataaatagagatcattgcacactcttttattcatttagaaaaggctagtggttcaaggcaaga 30544270  T
Q  340 gtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggta-tgtttttcaattgttttgtaatgatgtcggttgccatg 436  Q
    ||||| ||  |   | ||||||||| ||||||  |||| | || ||||| ||| || | || | |||||  |||||||||||||||||  ||||||||||    
T  30544271 gtcaaacaataggcgcttcaaggcataggatcttcatcctcctcttgttttctttatgatattttttttttattgttttgtaatgatggtggttgccatg 30544370  T
Q  437 agcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttg 489  Q
    ||||||  ||||| || ||||||||||||  |||||| || |||||||||||||    
T  30544371 agcaactgaacctatttgattagggttccatgatgaatctcttcttatttgttg 30544424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 276 - 505
Target Start/End: Complemental strand, 27085207 - 27084978
Alignment:
Q  276 actataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--ca 373  Q
    ||||||||||||||||| |||||||||||| ||||||| | || |||   |||||||| ||| |||||| ||||| || || |||| |||||||||  ||    
T  27085207 actataaatagagacccctgcacactcttttattcatttaaaaagctta-ggtacaagtcaagggtcaagcatcaaaactt-caagacagaggatctcca 27085110  T
Q  374 tctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa 473  Q
    || | || ||||||||  || | |||||||||  |||||||| ||| ||||||||||| |||||||||| ||||||||| |||||||| | | |||||||    
T  27085109 tcctcctcttgttctcattaag-tatgtttttatattgttttttaacgatgtcggttgtcatgagcaactaaacctctttgattagggcttcacgatgaa 27085011  T
Q  474 -cctttcttatttgttggattctattaataaag 505  Q
     ||||| |||||||||||| || ||||||||||    
T  27085010 cccttttttatttgttggactcaattaataaag 27084978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 251 - 505
Target Start/End: Complemental strand, 24927518 - 24927261
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||||||  | ||||||||||||||||||||||   ||| ||||||||| |  | ||| ||| ||||||||| ||||| || ||    
T  24927518 tctcttaacccctaagtaatcatctaatataaatagagacccttgcacaaatttt-attcattcatatagttagtggtccaaggcaaatgtcaaacacca 24927420  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
      || |||||||  |||||||  |||| | |  ||||||||| ||||||||||||||| ||||||||||||||||| |  |||| |||||||||  ||||    
T  24927419 ggagcttcaaggtggaggatcttcatcctccccttgttctctttagggtatgtttttctattgttttgtaatgatgccatttgctatgagcaactgaacc 24927320  T
Q  449 tct-tcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    ||| |||||| ||||||   ||||||| | ||||||||| |||||||| ||||||||||    
T  24927319 tctctcgatttgggttctaagatgaacttattcttattttttggattcaattaataaag 24927261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 263 - 504
Target Start/End: Original strand, 24120723 - 24120963
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||||||   ||||||||||||||| |||||||| |||| | | |||||||| |||| ||||  ||| ||| || ||| |||||  |||| |||||    
T  24120723 taagtaatcatatgctataaatagagaccattgcacacacttttaatgattcagaaagctaccggtttaagccaagggccaagcatca-gagttccaagg 24120821  T
Q  363 cagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagg 460  Q
    |||||||  || ||| | || |||||||||||| ||||| ||||| ||||||||  |||||||||  ||||||||  ||||| ||||||||| ||| |||    
T  24120822 cagaggatctctatcctcctcttgttctctctacggtat-ttttttaattgtttgttaatgatgtatgttgccat--gcaactaaacctctttgatcagg 24120918  T
Q  461 gttcctcgatgaac-ctttcttatttgttggattctattaataaa 504  Q
    |||||  ||||||| | |||||||||||||||||| |||||||||    
T  24120919 gttccaagatgaactccttcttatttgttggattccattaataaa 24120963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 505
Target Start/End: Complemental strand, 12774525 - 12774270
Alignment:
Q  253 tcttaatccttaagtaatcattcactataaatagagacccttgcacactctttg--attcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||| || |||||||  || ||||||||||||| | |||||||||| ||||   ||| |||||||||| ||| |||||||| ||| |||||| |||||    
T  12774525 tcttaaaccctaagtaacgatgcactataaatagacagccttgcacacacttttttatttattcagaagg-tagtggtacaagacaagggtcaaacatca 12774427  T
Q  351 caagtttcaaggcagaggatccatctttcta---ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
     || || ||||||||| |||   || |||||   |||||||||||||  |||||||||| |||||||||||||||||  |||||||||| ||||| ||||    
T  12774426 gaactt-caaggcagaagattt-tccttctactcttgttctctctagattatgtttttctattgttttgtaatgatgaaggttgccatgtgcaactaaac 12774329  T
Q  448 ctcttcgattagggttcctcgatgaacc-tttcttatttgttggattctattaataaag 505  Q
    ||||| ||| | ||||||  |||||||| ||| ||||||||| ||||| |||| |||||    
T  12774328 ctctttgatcaaggttccaagatgaaccttttattatttgttagattcaattagtaaag 12774270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 242 - 367
Target Start/End: Original strand, 18786125 - 18786250
Alignment:
Q  242 tattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggt 341  Q
    |||||||||||||||||||| ||||||||||| |||||| ||| |||||| ||||||||| ||| ||||||| |||| || | |||||||||| || |||    
T  18786125 tattttcactctcttaatccctaagtaatcatacactattaattgagacctttgcacacttttttattcatttagaaagccatcggtacaaggaaatggt 18786224  T
Q  342 caatcatcacaagtttcaaggcagag 367  Q
    ||| |||||  || ||||||||||||    
T  18786225 caagcatcaggagcttcaaggcagag 18786250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 11437596 - 11437756
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| |||||||||||||||||||||||||  || || |||||||||| |||||||| || ||||||||| |||||| ||||  ||||||  ||||||     
T  11437596 atgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagagtgaagataattcatttgaagttccaaagcattgcaagacggaagaaca 11437695  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgc 175  Q
     |||||||||| | ||||||| || |||| || || |||||| | ||||||| ||||||||    
T  11437696 cttgaaaaaggatcgaaaactacagaatttgcacaagaggggttacctcatgtgcccctgc 11437756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 504
Target Start/End: Original strand, 13304978 - 13305105
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cc 475  Q
    |||| |||||||||||||||||| |||||| |||||||| | ||||||||||||||||| |||||| ||||||||| ||||||| |||  ||||||| ||    
T  13304978 ttcttttgttctctctagggtatatttttctattgttttcttatgatgtcggttgccataagcaactaaacctctt-gattaggtttctacgatgaaccc 13305076  T
Q  476 tttcttatttgttggattctattaataaa 504  Q
     ||||||||||||||  | ||||||||||    
T  13305077 cttcttatttgttggtatttattaataaa 13305105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 13583452 - 13583304
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaa----tcatttgaatttccaaggcatcacaagacaaaagaactgt 116  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||| |||||    ||||||||| |||||||| ||  ||||||  ||||||  |    
T  13583452 attgaagttcaatggttcttagaagatatttgaagacaatacaaagtgaaaaaaaaaaattcatttgaagttccaaggtattgcaagacggaagaacgct 13583353  T
Q  117 tgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcat 165  Q
     |||||| | | ||||||| |||||||||| || |||||||||||||||    
T  13583352 ggaaaaaagatcgaaaactacataattcgcacatgaggggctgcctcat 13583304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 263 - 505
Target Start/End: Original strand, 32239730 - 32239970
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||||||   |||||||| |||||||||||||||  | | ||| |||||||| ||||||||| ||| ||||||||||| ||| | | |||  ||||    
T  32239730 taagtaatcataggctataaattgagacccttgcacacattattatttattcagaaagctagcggttcaatgcaaaggtcaaacattaga-gttcaaagg 32239828  T
Q  363 cagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggt 462  Q
    || ||  | |||| | || ||||||| ||||| | ||||||||| |||| ||||| |||||||| ||||   |||||||| ||||||||| |||||||||    
T  32239829 ca-agatttcatcctcctcttgttctttctagagcatgtttttctattgatttgttatgatgtctgttgttgtgagcaactaaacctctt-gattagggt 32239926  T
Q  463 tcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    |    ||||||||| |||||||||||||||||| ||||||||||    
T  32239927 tttaagatgaacctcttcttatttgttggattcaattaataaag 32239970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 494
Target Start/End: Complemental strand, 13583220 - 13583030
Alignment:
Q  307 attcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttt 404  Q
    ||||||||| || ||||| |||||||||||| |||||| |||||  || |||||||| |||||||  || |   || || |||| | |||||||||||||    
T  13583220 attcattcataaagctagaggtacaaggcaagggtcaaccatcaagagcttcaaggcggaggatctccaccaccctcttattctttgtagggtatgtttt 13583121  T
Q  405 tcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatg-aacctttcttatttgttggattc 494  Q
    || ||||||||||||||||||  |||| |||||| ||| ||| |||||  ||||||||||| | ||| |||| ||||||| ||||||||||    
T  13583120 tccattgttttgtaatgatgtttgttgtcatgagtaactaaatctctttcattagggttccacaatgaaacccttcttatatgttggattc 13583030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 263 - 504
Target Start/End: Complemental strand, 15213403 - 15213167
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||||||   ||||||||||||||||| | | ||  | |  ||||||||||| ||||||||| |||||||| |||||  ||||| | |||||||||    
T  15213403 taagtaatcatatgctataaatagagaccctaggatacattatttttcattcagaaagctagcggttcaaggcaagggtcatgcatcaga-gtttcaagg 15213305  T
Q  363 cagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggt 462  Q
    ||      ||||| | ||  |||||| ||||||||||||||||||||| |||||| |||||||  ||| ||||||||||| |||| |||| ||||| |||    
T  15213304 catc----ccatcctcctcatgttctttctagggtatgtttttcaattattttgttatgatgtttgtttccatgagcaactaaacatctt-gattatggt 15213210  T
Q  463 tcctcgatgaa-cctttcttatttgttggattctattaataaa 504  Q
    ||   |||||| || ||||||| |||||||||| |||||||||    
T  15213209 tctaagatgaatcccttcttatctgttggattcaattaataaa 15213167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 383 - 505
Target Start/End: Complemental strand, 28900853 - 28900732
Alignment:
Q  383 tgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttctt 481  Q
    ||||||||||||| |||||||||| |||||||||| |||||||| |||||  |||||||| ||||||||| ||||  |||||| ||||||| || |||||    
T  28900853 tgttctctctaggatatgtttttctattgttttgttatgatgtctgttgcactgagcaactaaacctctt-gatt-cggttccacgatgaaccccttctt 28900756  T
Q  482 atttgttggattctattaataaag 505  Q
    |||||||| ||  |||||||||||    
T  28900755 atttgttgaatattattaataaag 28900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 474
Target Start/End: Complemental strand, 22892776 - 22892678
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaa--ttgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac 474  Q
    |||| ||||||||||||||||||||||||| |  || ||||||  ||||||| ||||||||||||||| ||||||||| ||||||||||||  |||||||    
T  22892776 ttctcttgttctctctagggtatgtttttctatttttttttgttctgatgtctgttgccatgagcaactaaacctctt-gattagggttccaagatgaac 22892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 505
Target Start/End: Original strand, 23876395 - 23876649
Alignment:
Q  253 tcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcaca 352  Q
    |||||| ||||||||||| || |||||||||||||||| ||| |||| ||||| ||| ||| || | |||||||||| |||||||  || || ||||| |    
T  23876395 tcttaacccttaagtaatgatgcactataaatagagacacttacacattcttttatttatttagcaagctagcggtataaggcaagtgttaaacatcaga 23876494  T
Q  353 agtttcaaggcagaggatc-----catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
    | || ||||  | |||||      | || | || ||||||| |||| |||||||||||| ||||||||||||||||||  ||| ||||| ||||| ||||    
T  23876495 actt-caagctataggattgtcctcctcatcctcttgttctatctacggtatgtttttctattgttttgtaatgatgtatgtttccatgcgcaactaaac 23876593  T
Q  448 ctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    ||||   ||||||| ||   |||||| |  |||||||||||||||||| ||||||||||    
T  23876594 ctct---attagggctcgaagatgaatcacttcttatttgttggattcaattaataaag 23876649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 505
Target Start/End: Original strand, 24094689 - 24094863
Alignment:
Q  330 caaggcaaaggtcaatcatcacaagtttcaaggcagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggt 429  Q
    |||||||| |||||| ||||| |||||||||||||||   || ||| | || ||||| | ||||| |||||||| || |||||||||| || ||||  ||    
T  24094689 caaggcaagggtcaaacatca-aagtttcaaggcagaatctctatcctcctcttgttttgtctagagtatgtttctctattgttttgttatcatgtttgt 24094787  T
Q  430 tgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    | ||||||||||| ||||||||| ||||| |||||   ||| || || |||||||||||||||||| ||||||||||    
T  24094788 ttccatgagcaactaaacctctt-gattacggttctaagattaatcccttcttatttgttggattcaattaataaag 24094863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 504
Target Start/End: Original strand, 29292355 - 29292560
Alignment:
Q  301 tctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggta 398  Q
    ||||| |||| ||||||| | ||| |||||||||||| | |||| |||||  || ||||||| ||| ||||  |||| |||| ||||||||||||||||     
T  29292355 tcttttattccttcagaaagttagaggtacaaggcaatgatcaaacatcaggagcttcaaggaagaagatcagcatcattctcttgttctctctagggtg 29292454  T
Q  399 tgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctat 497  Q
    | |||||  |||||| |||||||||| |||||| |||| ||| | ||||||||  |||  | ||||| | ||||| |||||||||| ||||| |||| ||    
T  29292455 t-tttttttattgttctgtaatgatgccggttgtcatgtgcatctaaacctctatgatatgagttccacaatgaaccctttcttatatgttgaattcaat 29292553  T
Q  498 taataaa 504  Q
    |||||||    
T  29292554 taataaa 29292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 30543937 - 30544095
Alignment:
Q  15 atgaatattgaagttcaatggttctt-agaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaac 113  Q
    ||||| |||||||||||||||||||| | ||| ||| |  |||||||| ||||||||||||| |||||| || |||||||||||  |||| |  |||||     
T  30543937 atgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaagtgaagaaaattcatttcaagttccaaggcattgcaaggcggaagaat 30544036  T
Q  114 tgttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccc 172  Q
       ||||||||||| |||||||||  || ||| ||| |||||| ||||||||| |||||    
T  30544037 gagtgaaaaagggtcgaaaactgctgaaatcgtgcatgaggggttgcctcatgtgcccc 30544095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 505
Target Start/End: Complemental strand, 29046824 - 29046712
Alignment:
Q  393 agggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttgga 491  Q
    ||||||| |||| | ||| |||||| |||||||  ||||||||||| ||| ||| || || |||||||||||| |||||||||  |||||||||||||||    
T  29046824 agggtatattttactattattttgttatgatgtttgttgccatgagaaactaaatctttt-gattagggttccacgatgaaccccttcttatttgttgga 29046726  T
Q  492 ttctattaataaag 505  Q
     | |||||||||||    
T  29046725 atttattaataaag 29046712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 29291946 - 29292023
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaa 92  Q
    ||||||||||||| ||||||||||||||||||| | || |||||| | |||||||| |||| |||||| || ||||||    
T  29291946 atgaatattgaagatcaatggttcttagaaggtctttgaagacaacagaaagtgaaaaaaattcatttcaaattccaa 29292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 12957092 - 12957216
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||||||| ||||||||||||||| | |||||||| |||||||   || ||||| ||||| ||||||||| ||||||| |||    |||||  | ||||    
T  12957092 ttgttctctatagggtatgtttttctaatgttttgttatgatgtttattaccatgtgcaactaaacctctttgattaggattctaaaatgaatgccttct 12957191  T
Q  481 tatttgttggattctattaataaag 505  Q
    |||||||||||||  ||||||||||    
T  12957192 tatttgttggatttcattaataaag 12957216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 28901287 - 28901221
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| |||||| |||||||||||||| ||||| | || |||||||||||||||||||||| ||||||    
T  28901287 atgaagattgaa-ttcaatggttcttataaggtttctgaagacaatacaaagtgaagaaaattcattt 28901221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 5569833 - 5569748
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaa 337  Q
    |||||||| || ||||||||||||   ||||||||||||||||| ||||| |||| ||||||||||||  ||| |||| ||||||||    
T  5569833 tctcttaaaccctaagtaatcatttgttataaatagagaccctt-cacacacttttattcattcagaaaactaacggttcaaggcaa 5569748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 16051830 - 16051748
Alignment:
Q  382 ttgttctctctagggtatg-tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggtt 463  Q
    |||||||||||||| |||| |||||| |||||||||| |||||||  ||||||||| | ||| |||||||||  |||||||||    
T  16051830 ttgttctctctaggatatgttttttctattgttttgttatgatgtttgttgccatgtgaaactaaacctctttaattagggtt 16051748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 22894457 - 22894391
Alignment:
Q  28 ttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaagg 94  Q
    |||||| ||||||||| ||| | || |||||||||||||||||||||| || |||||| ||||||||    
T  22894457 ttcaattgttcttagatggtttttgaagacaatacaaagtgaagaaaattcttttgaagttccaagg 22894391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 28260071 - 28259949
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttct 480  Q
    |||||||||||| |||||||||||| ||| |||| | |||||||| |||| || | || || ||||  ||| |||||||||||   ||||||||| ||||    
T  28260071 ttgttctctctatggtatgtttttctattattttatgatgatgtcagttgtcacgtgccactaaac--ctttgattagggttctaggatgaacctcttct 28259974  T
Q  481 tatttgttggattctattaataaag 505  Q
    |||||| | ||||| ||||||||||    
T  28259973 tatttgatagattcaattaataaag 28259949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 32239464 - 32239585
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| ||||||||||||||||| ||| |||||   |  |||||||| ||||||||||||| |||||| || || ||||||||  ||||||| || |||     
T  32239464 atgaagattgaagttcaatggtttttataaggttcttaaagacaataaaaagtgaagaaaattcatttcaagtttcaaggcattgcaagacagaaaaacg 32239563  T
Q  115 gttgaaaaagggttgaaaactg 136  Q
    |  ||||||||||  |||||||    
T  32239564 ggcgaaaaagggtcaaaaactg 32239585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 28292039 - 28291979
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||| ||||||| | ||||||||||||||||| | || |||||||||||| |||||||||    
T  28292039 atgaagattgaagattaatggttcttagaaggtctttgaagacaatacaaaatgaagaaaa 28291979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 504
Target Start/End: Complemental strand, 28290908 - 28290776
Alignment:
Q  370 tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcga 469  Q
    |||||| | |||||| |||||||||||| || |||||  |||||||||| || ||   ||||  ||| ||||| |||||| ||  |||||||||   |||    
T  28290908 tccatcctcctattgctctctctagggtgtggttttcttttgttttgtattgttgcatgttgtgatgtgcaactaaacctttt--attagggttatacga 28290811  T
Q  470 tgaacctttcttatttgttggattctattaataaa 504  Q
    |||||| | |||||||||||||||| |||||||||    
T  28290810 tgaaccctacttatttgttggattcaattaataaa 28290776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 31436649 - 31436742
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaa 112  Q
    ||||| ||||| | ||||||||||||||   |||| || ||||||||||||||||| |||||| |||| || |||||||||||  ||||||| |||||    
T  31436649 atgaagattgacgatcaatggttcttag---gtatttgaagacaatacaaagtgaa-aaaaattatttcaagttccaaggcattgcaagacagaagaa 31436742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 505
Target Start/End: Original strand, 14184566 - 14184628
Alignment:
Q  444 aaacctcttcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    ||||||||| |||||| ||||| | |||| ||| |||||||||||||||||| ||||||||||    
T  14184566 aaacctctttgattagagttccactatgatcctcttcttatttgttggattcaattaataaag 14184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 13081867 - 13081806
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || |||||||||||| ||||||||| ||||||    
T  13081867 attgaagatcaagggttcttagaaggttgttgaagacaatacaaaatgaagaaaattcattt 13081806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 14424745 - 14424684
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| ||||||||||||||||||| | || | ||||| ||| |||||||||| ||||||    
T  14424745 attgaagatcaatggttcttagaaggtttttgaacacaattcaatgtgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 16054476 - 16054537
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || ||| |||||||||||||||||| ||||||    
T  16054476 attgaagatcaagggttcttagaaggttgttgaagaaaatacaaagtgaagaaaattcattt 16054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 16052200 - 16052148
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| |||||||||||| | || |||||||||||| ||||||||| ||||||    
T  16052200 caatgattcttagaaggtttttgaagacaatacaaaatgaagaaaattcattt 16052148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 353 - 437
Target Start/End: Original strand, 23893652 - 23893736
Alignment:
Q  353 agtttcaaggcagaggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    |||||||||||||    |||||| | |||||||||||||||| ||| ||| ||| |||||||||| ||| |||  ||||||||||    
T  23893652 agtttcaaggcaggatctccatcctcctattgttctctctagagtaggttattctattgttttgttatgttgtatgttgccatga 23893736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 26882745 - 26882785
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaa 318  Q
    ||||||||||||||||||| |||| ||| ||||||||||||    
T  26882745 tataaatagagacccttgcccactattttattcattcagaa 26882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 167
Target Start/End: Complemental strand, 27097720 - 27097588
Alignment:
Q  35 gttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttgaaaac 134  Q
    ||||||||||||| | || |||||||||||  ||||||||| ||| || || |||||||||||  ||||||  ||||||  |  |||||| | |||||||    
T  27097720 gttcttagaaggtctttgaagacaatacaagttgaagaaaattcaattcaagttccaaggcattgcaagacggaagaacactcaaaaaagagatgaaaac 27097621  T
Q  135 tgcataattcgcgcaggaggggctgcctcatgc 167  Q
     ||| ||||||| |  ||||  |||||||||||    
T  27097620 cgcaaaattcgcactagaggcactgcctcatgc 27097588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 28902280 - 28902332
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||||||||||||||   || ||||||||||||||||| |||| ||||||    
T  28902280 caatggttcttagaaggttattgaagacaatacaaagtgaataaaattcattt 28902332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 6e-54; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 241 - 502
Target Start/End: Original strand, 21549090 - 21549351
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaagg 340  Q
    ||||||| ||| |||||| ||  |||||||||| || |||||||| ||||||||||||||||||| ||||||||| ||  ||||| ||||||| ||| ||    
T  21549090 ctatttttactttcttaacccaaaagtaatcatgcaatataaataaagacccttgcacactcttttattcattcaaaaatctagcagtacaagtcaatgg 21549189  T
Q  341 tcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgag 438  Q
    |||| |||||  |  ||||||||||||||  |||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| || |||||     
T  21549190 tcaagcatcaggatcttcaaggcagaggatctccatcctcctcttgttctctctagggtatgtttttctattgttttgtaatgatgtcggctgtcatgaa 21549289  T
Q  439 caacaaaacctcttcgattagggttcctcgatg-aacctttcttatttgttggattctattaata 502  Q
    |||| ||| |||||   |||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  21549290 caactaaatctctt---ttagggttccacgatgaaacccttcttatttgttggattctattaata 21549351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 240 - 505
Target Start/End: Complemental strand, 52270903 - 52270627
Alignment:
Q  240 tctattttcactctcttaatccttaagtaatcattcactataaatagagacccttg-------cacactctttgattcattcagaaggctagcggtacaa 332  Q
    ||||||||||||||||||| || ||||||||||| || ||||||||||||| |||        |||| ||||| |||||||||||| |||||||||||||    
T  52270903 tctattttcactctcttaacccctaagtaatcatgcaatataaatagagactcttcactgttacacaatcttttattcattcagaaagctagcggtacaa 52270804  T
Q  333 ggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggtt 430  Q
    ||||| || ||| |||||  || |||| |||| ||||||  |||| | || |||||||||||||   ||||||||| |||||||||||||||||||||||    
T  52270803 ggcaagggccaagcatcaggagcttcacggcaaaggatcttcatcctcctcttgttctctctagatgatgtttttctattgttttgtaatgatgtcggtt 52270704  T
Q  431 gccatgagcaacaaaacctcttcgattagggttcctcgatgaa--cctttcttatttgttggattctattaataaag 505  Q
    |||||||| ||| |||| | || |||||||||||| |||||||  || ||||||||| ||||||||| |||||||||    
T  52270703 gccatgagaaactaaacttatttgattagggttccacgatgaacccccttcttattttttggattcttttaataaag 52270627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 241 - 505
Target Start/End: Complemental strand, 25665461 - 25665194
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaagg 340  Q
    |||||||||| || | || || ||||||| ||| |||| |||||||||||||||||||| | ||| ||||||||| || |||||| ||||||| ||| ||    
T  25665461 ctattttcacactttgaacccataagtaagcatgcactgtaaatagagacccttgcacaatttttaattcattcataaagctagcagtacaagacaaggg 25665362  T
Q  341 tcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgag 438  Q
    |||| |||||  || ||||||||||| ||  |||||| | || |||||||||||||| ||||||||  | ||  ||| ||||||||| |||| || | ||    
T  25665361 tcaagcatcatgagcttcaaggcagatgatctccatcctcctcttgttctctctaggatatgttttctattttgtttttaatgatgttggtttcctttag 25665262  T
Q  439 caacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |||| ||||||||| ||||| |||||| ||||||| || ||||||||||||| |||||||| ||||||    
T  25665261 caactaaacctctttgattaaggttccacgatgaaccccttcttatttgttgaattctattgataaag 25665194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 19257481 - 19257371
Alignment:
Q  395 ggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggatt 493  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||  |||||| || |||||||||||||||||    
T  19257481 ggtatgtttttctattgttttgtaatgatgtcggttgtcatgagcaactaaacctctttgattagggttccaagatgaaccccttcttatttgttggatt 19257382  T
Q  494 ctattaataaa 504  Q
    | |||||||||    
T  19257381 caattaataaa 19257371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 26854258 - 26854096
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||||||||  |||||   ||||||     
T  26854258 atgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaagtgaagaaaattcatttgaagttccaaggcattgcaagatggaagaac- 26854160  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgca 178  Q
      ||||||| ||| ||||| |||| | ||||| || |||||| |||||||||| ||||||||||    
T  26854159 actgaaaaatggtcgaaaattgcagagttcgcacatgaggggatgcctcatgcacccctgcgca 26854096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 21548824 - 21548989
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| ||||||| | |||||||||||||||  || || ||| |||||||  |||| |||| ||||||||| ||||||||||| ||||||| ||||||      
T  21548824 atgaagattgaagctaaatggttcttagaagacatttgaagataatacaagttgaaaaaaattcatttgaagttccaaggcattacaagacgaaagaatg 21548923  T
Q  115 gttgaaaaagggttg-aaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcat 179  Q
     | |||||||||||| |||||||||||||| ||||| ||||| |||||||| || |||||||||||    
T  21548924 ctagaaaaagggttgaaaaactgcataatttgcgcaagagggactgcctcaagctcccctgcgcat 21548989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 423
Target Start/End: Original strand, 25778197 - 25778361
Alignment:
Q  261 cttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaa 360  Q
    |||||||||| || ||||||||||||||||| ||||||||||||| ||||||| | || | || | ||||||||||| |||||| ||||   || |||||    
T  25778197 cttaagtaataatgcactataaatagagacctttgcacactcttttattcatttataaagataacagtacaaggcaagggtcaaacatctggagcttcaa 25778296  T
Q  361 ggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgat 423  Q
    || |||| |  |||||| | || | ||||||||||||||||||||||| ||||||||||||||||    
T  25778297 ggaagagcatctccatcctcctctcgttctctctagggtatgtttttctattgttttgtaatgat 25778361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 52271183 - 52271020
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| |||||||||||||||| |||||||||||| || |||||||||||||||||||||| |||||| || |||||||| ||  ||||||  ||||||     
T  52271183 atgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaaattccaaggaattgcaagacggaagaacg 52271084  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcat 179  Q
    |  | ||||||||  |||||||   |||||| ||| |||||| ||||| ||||||||||||||||    
T  52271083 ggcg-aaaagggtcaaaaactgttgaattcgtgcaagaggggttgccttatgcgcccctgcgcat 52271020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 278 - 504
Target Start/End: Original strand, 34533109 - 34533337
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catc 375  Q
    ||||||||||||| |||||||||  | | ||||||| ||||  ||| | || ||| |||  |||||| |||||  |||||||||| ||||||||  ||||    
T  34533109 tataaatagagactcttgcacacattcttattcatttagaaaactaacagttcaatgcacgggtcaagcatca-tagtttcaaggaagaggatcttcatc 34533207  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgat-gaac 474  Q
     | || ||||||||||||||||||||||||| |||||||||  |||||||  || | |||| ||||| ||||||||| |||||||||||   ||| || |    
T  34533208 ctcctcttgttctctctagggtatgtttttcgattgttttggtatgatgtttgtcgtcatgtgcaactaaacctctttgattagggttctaagatggacc 34533307  T
Q  475 ctttcttatttgttggattctattaataaa 504  Q
    | |||||||||||||||||| |||||||||    
T  34533308 ccttcttatttgttggattcaattaataaa 34533337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 50047671 - 50047796
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatg-tcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttc 479  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |  ||||||||||||||| ||||||||| |||||| |||    |||||| || |||    
T  50047671 ttgttctctctagggtatgtttttatattgttttgtaatgatgttttgttgccatgagcaactaaacctctttgattagagttataagatgaaccccttc 50047770  T
Q  480 ttatttgttggattctattaataaag 505  Q
    ||||||||||||||| ||||||||||    
T  50047771 ttatttgttggattcaattaataaag 50047796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 382 - 493
Target Start/End: Complemental strand, 14744976 - 14744864
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttct 480  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||| || |||||||||  |||||||  |||||    
T  14744976 ttgttctctctatgatatgtttttctattgttttgtaatgatgtcggttgtcatgtgcaactaaacctctttgactagggttccaagatgaactttttct 14744877  T
Q  481 tatttgttggatt 493  Q
    ||||| |||||||    
T  14744876 tatttattggatt 14744864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 12810738 - 12810866
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-c 475  Q
    |||| ||||||||| ||||||||| ||||| ||| |||||| |||| ||  ||||||||||||||||||||||||| ||||||||||||  ||||||| |    
T  12810738 ttctcttgttctctttagggtatgcttttctattattttgttatgacgtttgttgccatgagcaacaaaacctctt-gattagggttccatgatgaactc 12810836  T
Q  476 tttcttatttgttggattctattaataaag 505  Q
     ||||||||||||||||   ||||||||||    
T  12810837 cttcttatttgttggatataattaataaag 12810866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 492
Target Start/End: Complemental strand, 15298534 - 15298291
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||| ||  | ||||||| |||||| || |||||| ||| || |||| |||| ||||||||||||| ||||  ||||| |||||    
T  15298534 tctcttaacccctaagtaatgatgtattataaattgagacctttccacactattttatccattaagaaagctagcggtacaacgcaattgtcaaacatca 15298435  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     | ||| |||||||||||||   || | | || ||||||||||||||||||| |||||  |||||||||||||||||  |||  |||| ||||| |||||    
T  15298434 ga-gttccaaggcagaggatattcaccctcctcttgttctctctagggtatgcttttcttttgttttgtaatgatgtatgttatcatgtgcaactaaacc 15298336  T
Q  449 tcttcgattagggttcctcgatgaa-cctttcttatttgttggat 492  Q
    |||| ||||| |   || ||||||| |||| ||||||||||||||    
T  15298335 tctttgattaagtaaccacgatgaatccttccttatttgttggat 15298291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 278 - 501
Target Start/End: Complemental strand, 11984855 - 11984631
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catc 375  Q
    |||||| | |||| |||||||||  | | |||||||||||| |||| |||| ||||||||| ||||| ||||| |   | ||||||||||||||  ||||    
T  11984855 tataaaaatagacacttgcacacattcttattcattcagaaagctaacggtgcaaggcaaatgtcaagcatcagag--tccaaggcagaggatctccatc 11984758  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-c 474  Q
     | || |||||||||||| | ||| ||||||  ||||||||  |||||||  ||||||||| ||||| ||||||||| |||||||||||   ||| || |    
T  11984757 ctcctcttgttctctctaagatatatttttcttttgttttgcgatgatgtatgttgccatgtgcaactaaacctctttgattagggttcaaagataaacc 11984658  T
Q  475 ctttcttatttgttggattctattaat 501  Q
    | |||||||||||||||||| ||||||    
T  11984657 ccttcttatttgttggattccattaat 11984631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 505
Target Start/End: Original strand, 30676014 - 30676133
Alignment:
Q  386 tctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatt 484  Q
    ||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||  ||| |||| ||||| |||||   |||||| || ||||||||    
T  30676014 tctctctagggtatgtttttctattgttttgttatgatgtttgttgccatgagcaacttaacttctt-gattaaggttcgaagatgaaccccttcttatt 30676112  T
Q  485 tgttggattctattaataaag 505  Q
    |||||||||| ||||||||||    
T  30676113 tgttggattcaattaataaag 30676133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 25665701 - 25665598
Alignment:
Q  22 ttgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaa 121  Q
    |||||||||||||||||||| ||  ||| |  |||||||||||||||||||||||||||||||| |||||||||||  ||||||  ||||||  ||||||    
T  25665701 ttgaagttcaatggttcttataaaatatttaaagacaatacaaagtgaagaaaaatcatttgaagttccaaggcattgcaagacggaagaacgattgaaa 25665602  T
Q  122 aagg 125  Q
    ||||    
T  25665601 aagg 25665598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 260 - 505
Target Start/End: Original strand, 31314006 - 31314253
Alignment:
Q  260 ccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttca 359  Q
    ||||||| ||| || ||||||||||||||| | |||  |||||||| ||| |||||||| |||||||||||||||  | |||||| |||||  || | ||    
T  31314006 ccttaagcaatgatgcactataaatagagatcattgttcactcttttatttattcagaaagctagcggtacaaggttagggtcaaccatca-gagctgca 31314104  T
Q  360 aggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgat 456  Q
    ||||||||||  ||||||    | |||||||||||| ||| |||||||| |||| |||||||||||||  |||  |||| | ||  |||||||| | |||    
T  31314105 aggcagaggatctccatccccatcttgttctctctatggtttgtttttctattg-tttgtaatgatgtttgttttcatgtgaaaataaacctctcttgat 31314203  T
Q  457 tagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    |||||||||  ||||| ||| ||||| |||||||||||| ||||||||||    
T  31314204 tagggttccaagatgagcctcttcttgtttgttggattcaattaataaag 31314253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 15416570 - 15416445
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttc 479  Q
    |||||||||||  ||||||||||||  ||||||||||| ||||||||||| |||| | ||| |||||||| |  ||||||||||| |||||||||| | |    
T  15416570 ttgttctctctttggtatgtttttctcttgttttgtaaagatgtcggttgtcatgtgtaactaaacctctattaattagggttccacgatgaacctctac 15416471  T
Q  480 ttatttgttggattctattaataaag 505  Q
    ||||||||||||||| | ||||||||    
T  15416470 ttatttgttggattcaactaataaag 15416445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 25730934 - 25731098
Alignment:
Q  257 aatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtt 356  Q
    ||||| |||||||| || ||||||||||||||||| ||||| ||||||| ||||||| | || | || | ||||||||||| ||| || |||||  || |    
T  25730934 aatccctaagtaataatgcactataaatagagacctttgcatactcttttattcatttataaagataacagtacaaggcaagggtaaaacatcaggagct 25731033  T
Q  357 tcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaa 419  Q
    | |||| ||||||||  |||| | ||   ||||||||||||||||||||||  ||||||||||||    
T  25731034 taaaggaagaggatcttcatcctcctcccgttctctctagggtatgtttttatattgttttgtaa 25731098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 27460540 - 27460460
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtaca 331  Q
    |||||||| || |||||||| || |||||||||||||||||||| |||||||||| |||| |||||||  |||||||||||    
T  27460540 tctcttaacccctaagtaatgatccactataaatagagacccttacacactcttttattctttcagaaaactagcggtaca 27460460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 26853994 - 26853912
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggcta 323  Q
    ||||||||||| ||| || || |||||||| || ||||||||||||||||||||| ||||| ||| |||||||||||| ||||    
T  26853994 ctattttcactatctcaacccctaagtaatgatacactataaatagagacccttgaacactattttattcattcagaaagcta 26853912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 277 - 505
Target Start/End: Original strand, 23223856 - 23224084
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--cat 374  Q
    ||||||||| |||||||||||||   | | |||||||||||| ||||| | | || || || |||||| |||||  |||| ||||||||||||||  |||    
T  23223856 ctataaataaagacccttgcacatattcttattcattcagaaagctagtgattcacggaaagggtcaagcatca-gagttccaaggcagaggatcttcat 23223954  T
Q  375 ctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa- 473  Q
    | | || | ||  ||||||||||||||||||| ||||||||||||||||||  |||| |||| | ||  ||||||||| |||| ||||||   ||||||     
T  23223955 cctcctctagt--tctctagggtatgtttttctattgttttgtaatgatgtatgttgtcatgcggaaataaacctctttgatttgggttctaagatgaac 23224052  T
Q  474 cctttcttatttgttggattctattaataaag 505  Q
    || ||||||| ||||| ||||  |||||||||    
T  23224053 cccttcttatatgttgcattcagttaataaag 23224084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 240 - 474
Target Start/End: Original strand, 23506216 - 23506452
Alignment:
Q  240 tctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaag 339  Q
    ||||||||||||||||| | || |||||||| || ||||||||||||||||||||| |||   ||  |||| ||||||| | |||| |||||||||||      
T  23506216 tctattttcactctcttgagccctaagtaataatgcactataaatagagacccttggacagaattctattctttcagaaagttagcagtacaaggcaagt 23506315  T
Q  340 gtcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    ||  | ||| |  || ||| |||||  |||  |||||| | || || |||||||||| | ||||||||| ||||||||||||||||||  || |  |||     
T  23506316 gtttagcattaagagcttcgaggcatcggatctccatcctcctcttattctctctagagaatgtttttctattgttttgtaatgatgttcgtagttatgt 23506415  T
Q  438 gcaacaaaacctcttcgattagggttcctcgatgaac 474  Q
    ||||| |||| ||||  ||||||||||| | ||||||    
T  23506416 gcaactaaacatcttttattagggttccacaatgaac 23506452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 500
Target Start/End: Original strand, 9328581 - 9328699
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    |||||| || ||||||||||||||| ||||||||||  ||||||   || ||||||||||| |||||| || ||||| || ||   |||||| |||||||    
T  9328581 ttgttccctatagggtatgtttttctattgttttgttgtgatgtatatttccatgagcaactaaacct-tttgattatggctcgaagatgaaccctttct 9328679  T
Q  481 tatttgttggattctattaa 500  Q
    ||||||||||||||||||||    
T  9328680 tatttgttggattctattaa 9328699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 11769932 - 11769865
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| |||||||  |||||||||||||||||| | || |||||||||||||||||||||| ||||||    
T  11769932 atgaagattgaagaccaatggttcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 11769865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 25494427 - 25494360
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| |||||||  |||||||||||||||||| | || |||||||||||||||||||||| ||||||    
T  25494427 atgaagattgaagaccaatggttcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 25494360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 19257724 - 19257662
Alignment:
Q  35 gttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcat 97  Q
    ||||||||||||| | || |||||||||||||||||||||| | |||| ||||||||||||||    
T  19257724 gttcttagaaggtctttgaagacaatacaaagtgaagaaaatttatttcaatttccaaggcat 19257662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 11769529 - 11769408
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttat 483  Q
    ||||||||| ||| |||||||  |||||||||| ||||||   ||| ||||| ||||| |||||| ||  ||||||||||   ||||||||  |||||||    
T  11769529 ttctctctatggtgtgtttttatattgttttgttatgatgaatgtttccatgtgcaactaaaccttttttattagggttctaagatgaaccccttcttat 11769430  T
Q  484 ttgttggattctattaataaag 505  Q
    ||||||||||| ||||||||||    
T  11769429 ttgttggattcaattaataaag 11769408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 26658068 - 26658195
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct 476  Q
    |||| ||||||||||||||||||||||||  ||||||||||  ||||||  |||| |||||||||| ||||||||| ||||| |||| |  ||||||| |    
T  26658068 ttctcttgttctctctagggtatgttttt-tattgttttgttgtgatgtttgttgtcatgagcaactaaacctctt-gattaaggtttcatgatgaacgt 26658165  T
Q  477 -ttcttatttgttggattctattaataaag 505  Q
     |||||||||| ||||   |||||||||||    
T  26658166 cttcttatttggtggacattattaataaag 26658195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 419 - 505
Target Start/End: Complemental strand, 23521226 - 23521140
Alignment:
Q  419 atgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    |||||||| ||| |||||||  || ||||||||| ||||||||||||  ||||||||| ||||||||||||||||  |||||||||||    
T  23521226 atgatgtctgttaccatgagagactaaacctctt-gattagggttccaagatgaacctcttcttatttgttggatcttattaataaag 23521140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 25126927 - 25126993
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaa 344  Q
    |||||||||||| ||||| ||||| ||| ||||||||| || |||||| ||||||||||| ||||||    
T  25126927 tataaatagagatccttgaacacttttttattcattcaaaaagctagcagtacaaggcaagggtcaa 25126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 30675674 - 30675727
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||||||||||||||| | || ||| |||||||||||||||||| ||||||    
T  30675674 tcaatggttcttagaaggtttttgaagataatacaaagtgaagaaaattcattt 30675727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 18300926 - 18300874
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    |||||||||||||||||| | || |||||||||| ||||||||||||| ||||    
T  18300926 caatggttcttagaaggtttttgaagacaatacagagtgaagaaaaattattt 18300874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 25374199 - 25374251
Alignment:
Q  449 tcttcgattagggttcctcgatgaacctttcttatttgttggattctattaat 501  Q
    |||| |||||||||||| | |||||||||| ||||||||||||||| ||||||    
T  25374199 tctttgattagggttccactatgaacctttattatttgttggattcaattaat 25374251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 25727847 - 25727788
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaa 74  Q
    ||||| ||||||| |||||||||||| |||||| | || ||||||| |||||||||||||    
T  25727847 atgaagattgaagatcaatggttcttggaaggtttttgaagacaatccaaagtgaagaaa 25727788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 25736255 - 25736196
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaa 74  Q
    ||||| ||||||| |||||||||||| |||||| | || ||||||| |||||||||||||    
T  25736255 atgaagattgaagatcaatggttcttggaaggtttttgaagacaatccaaagtgaagaaa 25736196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 50047351 - 50047418
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||||||||| |||||||| |||| |||||   || |||||||||||| ||||||||| ||||||    
T  50047351 atgaatattgaagatcaatggtacttaaaaggttattgaagacaatacaaaatgaagaaaattcattt 50047418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 500
Target Start/End: Complemental strand, 9252182 - 9252077
Alignment:
Q  395 ggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggatt 493  Q
    |||||||||||| |||||||| |   |||||| ||| ||||||||||| ||||||||| |||| |||||    |||||| || |||||||||||||||||    
T  9252182 ggtatgtttttctattgtttttttgagatgtctgtttccatgagcaactaaacctctt-gatttgggtttgaagatgaaccccttcttatttgttggatt 9252084  T
Q  494 ctattaa 500  Q
     ||||||    
T  9252083 ttattaa 9252077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 23421207 - 23421139
Alignment:
Q  326 ggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctcta 393  Q
    |||||||||||  |||||| || |||| ||||||||||||||||||  |||||| |||||||||||||||    
T  23421207 ggtacaaggcaggggtcaagcaccaca-gtttcaaggcagaggatctacatcttcctattgttctctcta 23421139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 12423847 - 12423786
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || |||||||||||||||||| ||| ||||||    
T  12423847 attgaagatcaaaggttcttagaaggttgttgaagacaatacaaagtgaaggaaattcattt 12423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 9328344 - 9328403
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||| |||||| |||||| ||||||||||||| | || ||||||||| ||||||||||||    
T  9328344 atgaagattgaa-ttcaatcgttcttagaaggtttttgaagacaatactaagtgaagaaaa 9328403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 23505939 - 23506010
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaag 93  Q
    ||||||| |||||||| ||| ||||  || || |||||||||||||||||||||| |||||| || |||||||    
T  23505939 attgaagatcaatggt-cttggaagacatttgaagacaatacaaagtgaagaaaattcatttcaagttccaag 23506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 241 - 505
Target Start/End: Complemental strand, 24596669 - 24596402
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaagg 340  Q
    ||||||||||| |||||| || ||  ||||||| || |||||||||||||| ||||||||||||| |||||||||||| |||   |||||||||||| ||    
T  24596669 ctattttcactatcttaacccgtatataatcatgcattataaatagagaccattgcacactcttttattcattcagaaagctgatggtacaaggcaaggg 24596570  T
Q  341 tcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgag 438  Q
    |||| |||||  || ||||||||||| ||  || ||| | || ||||||||||||| ||||||||||  |||||||| |||||||||||||||  |||||    
T  24596569 tcaagcatcaggagcttcaaggcagatgatctctatcatcctcttgttctctctagtgtatgtttttatattgttttataatgatgtcggttgttatgag 24596470  T
Q  439 caacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |||| |||||||||  ||||| ||||| ||||||| || ||||||||||||| |||||||||||||||    
T  24596469 caaccaaacctctttaattagagttccacgatgaacccattcttatttgttgaattctattaataaag 24596402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 251 - 493
Target Start/End: Original strand, 5636657 - 5636903
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    ||||||||||  |||||||| || |||||||||||||||||||||||||| |||| |||||||||||| |||||  ||||||||||| |||||| |||||    
T  5636657 tctcttaatcactaagtaatgatgcactataaatagagacccttgcacacacttttattcattcagaaagctagtagtacaaggcaatggtcaagcatca 5636756  T
Q  351 caagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttc-aattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
     ||| ||||||||||| ||  |||| | | || |||||||||||||||||| ||||||  ||||||||||||||||||  |||| |||| |||||  |||    
T  5636757 -aagcttcaaggcagatgatctccaacctcctcttgttctctctagggtatttttttcttattgttttgtaatgatgtatgttgtcatgtgcaactcaac 5636855  T
Q  448 ctct-tcgattagggttcctcgatgaa-cctttcttatttgttggatt 493  Q
    |||| |  ||||||||| |  |||||| ||||| ||||||||||||||    
T  5636856 ctctctttattagggtttcaggatgaaccctttattatttgttggatt 5636903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 310 - 504
Target Start/End: Complemental strand, 5312383 - 5312186
Alignment:
Q  310 cattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttca 407  Q
    |||| |||| ||||| ||||||||||||  ||||| ||| |  |||||||||| | | ||||  |||| | || ||||||||||||||||||||||||||    
T  5312383 cattgagaaagctagtggtacaaggcaagagtcaaacataaggagtttcaaggtataagatctccatcctcctcttgttctctctagggtatgtttttca 5312284  T
Q  408 attgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaa 504  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||| ||||||| |||  ||||||| || |||||||||||||||||| ||| |||||    
T  5312283 attgttttgtaatgatgtcggttgtcatgtgcaactaaacctctttgattaggattctacgatgaacccattcttatttgttggattcaattgataaa 5312186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 30406014 - 30406280
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaagg 340  Q
    |||||||||||||||||||   || |||||||| ||||||||||||| |||||||||||  |||| ||||||||| || ||||||||||||||| ||  |    
T  30406014 ctattttcactctcttaattgctatgtaatcatacactataaatagaaacccttgcacaaacttttattcattcataaagctagcggtacaaggtaatag 30406113  T
Q  341 tcaatcatcacaagtttcaaggcagaggatccatctttctattgttctctctagggtatgtttttc-aattgttttgtaatgatgtcggttgccatgagc 439  Q
    |||| |||||  ||  ||||| |||| ||||    || || |||| |||| ||   ||| |||||  ||||||||||||||||||| ||||||||| |||    
T  30406114 tcaagcatcaggagcatcaagccagatgatcttcattcctcttgtactctttatcatatatttttttaattgttttgtaatgatgttggttgccataagc 30406213  T
Q  440 aacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    ||| ||||||||| ||||| |||||| ||||||| || |||| ||||||||||||| ||||||||||    
T  30406214 aactaaacctctttgattatggttccacgatgaaccccttctcatttgttggattcaattaataaag 30406280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 278 - 464
Target Start/End: Complemental strand, 4092123 - 4091936
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagagga--tccatc 375  Q
    ||||||||||||||||| |||||  | | |||||||||||| |||||||||  ||||||| |||||| ||||| | ||| ||||||||||||  ||||||    
T  4092123 tataaatagagaccctttcacacattattattcattcagaaagctagcggttgaaggcaagggtcaagcatcagaggttccaaggcagaggatctccatc 4092024  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttc 464  Q
    || || |||||||||||| |||||||||||| |||||||||| || ||||  |||||||| |||||| ||||||||| |||||||||||    
T  4092023 ttcctcttgttctctcta-ggtatgtttttctattgttttgttataatgtatgttgccattagcaactaaacctctttgattagggttc 4091936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 9760540 - 9760808
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggta-caaggcaaag 339  Q
    |||||||||||||||||| || |||| || | |  |||||||||||||||| ||||| || |||| | ||||||| ||  |||| |||  |||| ||| |    
T  9760540 ctattttcactctcttaacccctaagaaaccttgaactataaatagagaccgttgcatacactttaactcattcaaaaaactaggggtggcaagacaagg 9760639  T
Q  340 gtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    ||||| |||||  || ||||||| ||||||||  |||| | ||||||||||||||| |||||||||||| ||| ||||||||||||||| | | ||| ||    
T  9760640 gtcaaccatcaagagcttcaaggaagaggatctccatcctcctattgttctctctaaggtatgtttttctattattttgtaatgatgtcagattccagga 9760739  T
Q  438 gcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    || || ||||||||| || ||||| | | ||||||| || ||||||||||||||||||| |||||||||    
T  9760740 gcgactaaacctctttgagtagggcttcacgatgaaccccttcttatttgttggattcttttaataaag 9760808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 9800982 - 9801249
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggta-caaggcaaag 339  Q
    |||||||||||||||||| || |||| || | |  |||||||||||||||| ||||| || |||| | ||||||| ||  ||||||||  |||||||| |    
T  9800982 ctattttcactctcttaacccctaagaaaccttgaactataaatagagaccgttgcatacactttaactcattcaaaaaactagcggtggcaaggcaagg 9801081  T
Q  340 gtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    ||||| |||||  || || |||| ||||||||  |||| | || |||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||    
T  9801082 gtcaagcatcaagagctttaaggaagaggatctccatcctcctcttgttctctctagggtgtgtttttcaattattttgtaatgatgtccgtttccatga 9801181  T
Q  438 gcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    || ||  |||||||| || ||| | | | ||||||| || |||||| |||||||||| | |||||||||    
T  9801182 gcgacttaacctctttgagtagagcttcacgatgaaccccttctta-ttgttggattgttttaataaag 9801249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 241 - 452
Target Start/End: Original strand, 9552586 - 9552800
Alignment:
Q  241 ctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggta-caaggcaaag 339  Q
    ||||||||||||||| || || |||| || | |  |||| ||||||||||| |||||||| |||| | ||||||||||  ||| ||||  |||||||| |    
T  9552586 ctattttcactctctcaacccctaagaaaccttgaactacaaatagagaccgttgcacacactttaactcattcagaaaactaacggtggcaaggcaagg 9552685  T
Q  340 gtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    ||||| |||||  || ||||||| ||||||||  |||| | || |||||||||||||||||| |||||| ||| |||||| |||||||| | | ||||||    
T  9552686 gtcaagcatcaagagcttcaaggaagaggatctccatcatcctcttgttctctctagggtatatttttctattattttgtgatgatgtcagcttccatga 9552785  T
Q  438 gcaacaaaacctctt 452  Q
    ||||| |||||||||    
T  9552786 gcaactaaacctctt 9552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 494
Target Start/End: Complemental strand, 22334948 - 22334702
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatc- 349  Q
    |||||||| || |||||||| || ||||||||||| ||| | ||| ||||||||| ||| |||||||| ||||| |||||||||||| |||||| ||||     
T  22334948 tctcttaacccctaagtaatgatgcactataaataaagatcattgaacactcttttattaattcagaaagctagtggtacaaggcaagggtcaagcatca 22334849  T
Q  350 acaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
    | || |||| ||||||||||  |||||  | || ||| ||| |||| | ||||||||||   | |||||||| |||||  |||| ||||  |||||||||    
T  22334848 agaactttc-aggcagaggatctccattctcctcttggtctttctaagatatgtttttcctattttttgtaaagatgtatgttgtcatgtacaacaaaac 22334750  T
Q  448 ctcttcgattagggttcctcgatgaa-cctttcttatttgttggattc 494  Q
    ||||| ||||| |||||| ||||||| || ||||| ||||||||||||    
T  22334749 ctctttgattatggttccacgatgaaccccttcttctttgttggattc 22334702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 30405770 - 30405929
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    ||||| |||||||||||||| |||||||||||||| || | ||||||||||||||| | || || |||||| ||||||||||||||| ||| |||||       
T  30405770 atgaagattgaagttcaatgattcttagaaggtatttgaatacaatacaaagtgaatacaattcgtttgaaattccaaggcatcacatgacgaaagagtg 30405869  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgc 175  Q
     ||||||||   |  |||||| || |||||| |||||||| ||||||||||||||||||||    
T  30405870 tttgaaaaata-tcaaaaactacagaattcgtgcaggaggtgctgcctcatgcgcccctgc 30405929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 4829268 - 4829378
Alignment:
Q  240 tctattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaag 339  Q
    ||||||||||||||||||| || |||||| |||| |||||| ||||||||| | |||||| | ||| ||||||| |||| |||||||||||||||||| |    
T  4829268 tctattttcactctcttaacccctaagtagtcatccactatgaatagagactcatgcacattattttattcatttagaaagctagcggtacaaggcaagg 4829367  T
Q  340 gtcaatcatca 350  Q
    ||||| |||||    
T  4829368 gtcaagcatca 4829378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 278 - 504
Target Start/End: Original strand, 18466987 - 18467216
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagagga--tccatc 375  Q
    |||||||||||||| ||||||||| ||| ||||||| |||| |||| ||||||||| ||||||||||  ||||  || ||||||| ||||||  ||| ||    
T  18466987 tataaatagagacctttgcacactattttattcattgagaaagctaacggtacaagacaaaggtcaagaatca-tagcttcaaggtagaggatttccctc 18467085  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaa- 473  Q
     | || ||| | || || |||||| |||||| ||||||||||||||||||  ||| ||||| ||||  |||||||| | ||||| |||||  |||| ||     
T  18467086 ctcctcttgctttcactggggtatatttttctattgttttgtaatgatgtatgttaccatgcgcaattaaacctctcttgattatggttcaacgataaac 18467185  T
Q  474 cctttcttatttgttggattctattaataaa 504  Q
    || |||||||| ||||||||| |||||||||    
T  18467186 cccttcttattagttggattcaattaataaa 18467216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 504
Target Start/End: Complemental strand, 2630047 - 2629934
Alignment:
Q  391 ctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttg 489  Q
    |||||||||||||||   ||||||||| |||||||  ||||||||||||||| ||||||||| ||||||||||||  |||||| || |||||||||||||    
T  2630047 ctagggtatgtttttattttgttttgttatgatgtttgttgccatgagcaactaaacctctt-gattagggttccatgatgaaccccttcttatttgttg 2629949  T
Q  490 gattctattaataaa 504  Q
    || | ||||||||||    
T  2629948 gaatttattaataaa 2629934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 24596936 - 24596780
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaa 120  Q
    ||||||||||| |||||| ||||||  || || |||||||||||||||||||||| ||||||||| |||||||||||  |||||| |||||| ||    |    
T  24596936 attgaagttcagtggttcatagaagaaatttgaagacaatacaaagtgaagaaaattcatttgaagttccaaggcattgcaagacgaaagaa-tgcgtga 24596838  T
Q  121 aaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcat 179  Q
    ||| ||| |||||||||||||||| || |  | ||| ||||||||||| ||||||||||    
T  24596837 aaatggtcgaaaactgcataattcacg-aacaagggttgcctcatgcgtccctgcgcat 24596780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 21472359 - 21472487
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-c 475  Q
    |||| |||||||||||||| |||||||||| ||||||||   |||||||  ||||||||||||| | ||||||||| || || |||||| |||||||| |    
T  21472359 ttcttttgttctctctaggatatgtttttctattgttttcatatgatgtatgttgccatgagcagctaaacctctt-gaatatggttccacgatgaacac 21472457  T
Q  476 tttcttatttgttggattctattaataaag 505  Q
     ||||||||||||||| | |||||||||||    
T  21472458 cttcttatttgttggaatttattaataaag 21472487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 505
Target Start/End: Original strand, 15757981 - 15758131
Alignment:
Q  357 tcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcg 454  Q
    |||||||||||||||  |||| | || ||||| |||||||| ||| |||||| ||| ||||||||||||||||||| |||||| |||  || | |||| |    
T  15757981 tcaaggcagaggatcttcatcatcctcttgttatctctaggatatatttttctattattttgtaatgatgtcggtttccatgaacaaataatcttctttg 15758080  T
Q  455 attagggttcctcgatgaacctttcttatttgttggattctattaataaag 505  Q
    |||| |||||||  ||||||| ||||||||| || ||||  ||||||||||    
T  15758081 attaaggttccttcatgaacccttcttattttttagatttgattaataaag 15758131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 390 - 505
Target Start/End: Original strand, 315717 - 315833
Alignment:
Q  390 tctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa--cctttcttatttgt 487  Q
    |||| |||||||||||| |||| ||||| |||||||  ||||||||||||||| ||||||||| |||||||||||| |||||||  || || |||||| |    
T  315717 tctatggtatgtttttctattgctttgttatgatgtatgttgccatgagcaactaaacctctt-gattagggttccacgatgaaccccctttttatttat 315815  T
Q  488 tggattctattaataaag 505  Q
    |||| | |||||||||||    
T  315816 tggaatttattaataaag 315833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 475
Target Start/End: Complemental strand, 7777628 - 7777531
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    |||| ||||||||||||||||||||||||| |||||||| | |||||||  ||||||||||||||| |||| |||| |||||| |||||  ||||||||    
T  7777628 ttctcttgttctctctagggtatgtttttctattgttttattatgatgtttgttgccatgagcaactaaacttctt-gattagagttccaagatgaacc 7777531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 505
Target Start/End: Complemental strand, 26839717 - 26839609
Alignment:
Q  397 tatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattct 495  Q
    |||||||||  |||||||||| ||||| |  ||||||||||||||| ||||||||| ||||| ||||||  |||||| || ||||||||||||||||| |    
T  26839717 tatgtttttatattgttttgttatgatatttgttgccatgagcaactaaacctctt-gattaaggttccaagatgaaccccttcttatttgttggatttt 26839619  T
Q  496 attaataaag 505  Q
    ||||||||||    
T  26839618 attaataaag 26839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 504
Target Start/End: Original strand, 20446807 - 20446918
Alignment:
Q  393 agggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc-tttcttatttgttgga 491  Q
    |||||||||||||| |||||||||| |||||||  ||||||||||||||| |||| |||| |||||||||| | | |||| ||  |||||||||||||||    
T  20446807 agggtatgtttttctattgttttgttatgatgtatgttgccatgagcaactaaacttctt-gattagggtttcacaatgagccgcttcttatttgttgga 20446905  T
Q  492 ttctattaataaa 504  Q
     | ||||||||||    
T  20446906 atttattaataaa 20446918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 9405376 - 9405267
Alignment:
Q  396 gtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattc 494  Q
    ||||| ||||| |||||||||| |||||||  ||||||||||||||| |||||||||  |||||||||||  |||||| || ||||||||||||||||      
T  9405376 gtatgattttctattgttttgttatgatgtatgttgccatgagcaactaaacctctt-aattagggttccatgatgaaccccttcttatttgttggatat 9405278  T
Q  495 tattaataaag 505  Q
    ||||| |||||    
T  9405277 tattattaaag 9405267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 505
Target Start/End: Original strand, 20017555 - 20017688
Alignment:
Q  372 catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatg 471  Q
    |||||| || ||||||||||| || |||||||||| |||||||||| ||| ||   ||| ||||||||||| |||||| || |||||||||||   ||||    
T  20017555 catcttcctcttgttctctcttggctatgtttttctattgttttgttatgttggttgttaccatgagcaactaaacctatt-gattagggttctaagatg 20017653  T
Q  472 aa-cctttcttatttgttggattctattaataaag 505  Q
    || ||||||||||| ||||||||| ||| ||||||    
T  20017654 aaccctttcttattggttggattcaattgataaag 20017688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 296 - 505
Target Start/End: Complemental strand, 21537164 - 21536955
Alignment:
Q  296 cacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctcta 393  Q
    |||||| ||| ||||||||| || ||||||||||||||| || ||| || |||||  || ||||| | ||||||||  |||||| || ||||| ||| ||    
T  21537164 cacactattttattcattcaaaaagctagcggtacaaggaaagggtaaagcatcaagagcttcaatggagaggatctccatcttcctgttgttgtctgta 21537065  T
Q  394 gggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttcttatttgttggat 492  Q
        ||||||| | |||||||||||||||| || ||||||||||||||| |||| | || ||||||||||||   |||||| | |||||||||| |||||    
T  21537064 ac--atgtttt-ctattgttttgtaatgatatcagttgccatgagcaactaaacttatttgattagggttccattatgaactccttcttatttgatggat 21536968  T
Q  493 tctattaataaag 505  Q
    || |||| |||||    
T  21536967 tccattactaaag 21536955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 501
Target Start/End: Original strand, 7815886 - 7816010
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cc 475  Q
    |||| |||||| |||||||||||||||||| |||||||| |  ||||||  ||||||||||||||| ||||||||| |||||| |||||  ||| || ||    
T  7815886 ttcttttgttcactctagggtatgtttttctattgttttcttgtgatgtatgttgccatgagcaactaaacctctt-gattagcgttccaagataaaccc 7815984  T
Q  476 tttcttatttgttggattctattaat 501  Q
     |||||||||||| || | |||||||    
T  7815985 cttcttatttgttcgaatttattaat 7816010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 3400411 - 3400535
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||| ||||||||||||||||||  |||||||||| ||||| |   |||||||| ||||| ||||||||| ||||| |||||   |||||| || ||||    
T  3400411 ttgttttctctagggtatgtttttatattgttttgttatgatttttattgccatgtgcaactaaacctctttgattaaggttctaagatgaaccccttct 3400510  T
Q  481 tatttgttggattctattaataaag 505  Q
    ||||| |||||||| |||| |||||    
T  3400511 tatttcttggattcgattagtaaag 3400535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 420
Target Start/End: Complemental strand, 2092988 - 2092863
Alignment:
Q  296 cacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catctttctattgttctctcta 393  Q
    |||||||||| ||||||||| || || | ||||||||||||| |||||| ||||| || |||||||||| | ||||   ||||| ||  |||||||| ||    
T  2092988 cacactcttttattcattcaaaacgcaaccggtacaaggcaatggtcaaccatca-aaatttcaaggcaaatgatctttatcttcctcatgttctctata 2092890  T
Q  394 gggtatgtttttcaattgttttgtaat 420  Q
    ||||| ||||||| |||||||||||||    
T  2092889 gggtacgtttttctattgttttgtaat 2092863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 503
Target Start/End: Original strand, 11082144 - 11082244
Alignment:
Q  401 tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttcttatttgttggattctattaa 500  Q
    |||||| |||||||| | |||||||  |||| |||| | | | ||||||||| |||||||||||| |||||||||   ||||||||||||||||||||||    
T  11082144 tttttctattgttttttcatgatgtgtgttgtcatgtgtagctaaacctctttgattagggttccacgatgaacc--ccttatttgttggattctattaa 11082241  T
Q  501 taa 503  Q
    |||    
T  11082242 taa 11082244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 20470747 - 20470688
Alignment:
Q  16 tgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||||||||||||||||||||||||||||||   || |||||||||||| |||||||||    
T  20470747 tgaatattgaagttcaatggttcttagaaggttcttgaagacaatacaaaatgaagaaaa 20470688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 21545765 - 21545698
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| ||||||| |||||||||||||||| |||| || |||||||| ||||||||||||| ||||||    
T  21545765 atgaagattgaagatcaatggttcttagaaagtatttgaagacaataaaaagtgaagaaaattcattt 21545698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 29544696 - 29544763
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| ||||||| |||||| |||||||||||| | || |||||||||||||||||||||| ||||||    
T  29544696 atgaagattgaagatcaatgattcttagaaggtttttgaagacaatacaaagtgaagaaaattcattt 29544763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 7493862 - 7493932
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctctt 452  Q
    ||||||||||||||||||||||||| |||||| | | |||||||  |||||||||| |||| |||||||||    
T  7493862 ttgttctctctagggtatgtttttctattgttattttatgatgtatgttgccatgaccaactaaacctctt 7493932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 21544400 - 21544299
Alignment:
Q  402 ttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaa 500  Q
    ||||| |||||||||||||||| | ||||   ||||||||| |||| |||| ||||||||||||  |||||| || |||||||||||||||||| ||||     
T  21544400 ttttctattgttttgtaatgatataggtt---atgagcaactaaacttctttgattagggttccatgatgaaccccttcttatttgttggattccattac 21544304  T
Q  501 taaag 505  Q
    |||||    
T  21544303 taaag 21544299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 505
Target Start/End: Complemental strand, 21545515 - 21545264
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || ||||||||||||  |||||||||||||||| | |||||  | | |||| ||||||| ||||||| | |||| ||| |||||| |||||    
T  21545515 tctcttaacccctaagtaatcattttctataaatagagacccgtacacacattattattctttcagaaagctagcgcttcaagtcaagggtcaaacatca 21545416  T
Q  351 caagtttcaaggcagagga-tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacct 449  Q
     ||| |  || |  | ||| |||||  | || ||||||||||||||||||||||||  |||||||||| ||||||   |||  |||| ||||  ||||||    
T  21545415 -aagatctaatg--gtggattccattatcctcttgttctctctagggtatgtttttatattgttttgttatgatgattgtt--catgtgcaagtaaacct 21545321  T
Q  450 cttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    ||| ||||||| |||   |||||| || |||||||||||||||||  ||||||||||    
T  21545320 ctttgattaggcttctaagatgaaccccttcttatttgttggatttaattaataaag 21545264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 504
Target Start/End: Original strand, 7151461 - 7151580
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatg-aacctttcttat 483  Q
    |||| ||||||||||||||||  ||| | |||| ||||||   ||||||||||||||| ||||||||| ||||||||||||  |||| |||| |||||||    
T  7151461 ttctgtctagggtatgtttttatattatattgttatgatgcatgttgccatgagcaactaaacctctt-gattagggttccatgatgaaaccattcttat 7151559  T
Q  484 ttgttggattctattaataaa 504  Q
    ||  |||||  ||||||||||    
T  7151560 ttaatggatattattaataaa 7151580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 7494873 - 7494932
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||| ||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||    
T  7494873 atgaagattgaagtt-aatggttcttagaaggtccatgaagacaatacaaagtgaagaaaa 7494932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 504
Target Start/End: Original strand, 23072921 - 23073025
Alignment:
Q  401 tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc-tttcttatttgttggattctatta 499  Q
    |||||| |||||||| |||||||||  |||| |||| | |||  |||||||| |||||||||||    ||||||| ||||||||||||||||||| ||||    
T  23072921 tttttctattgttttataatgatgtttgttggcatgtgaaacttaacctctttgattagggttctaaaatgaaccatttcttatttgttggattccatta 23073020  T
Q  500 ataaa 504  Q
    |||||    
T  23073021 ataaa 23073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 23126710 - 23126786
Alignment:
Q  386 tctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggt 462  Q
    |||||||||||| |||||||| |||||||||| |||||||   |||||||||| ||| || |||||| |||||||||    
T  23126710 tctctctagggtttgtttttctattgttttgttatgatgtttattgccatgagtaactaagcctctttgattagggt 23126786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 505
Target Start/End: Complemental strand, 20040345 - 20040231
Alignment:
Q  391 ctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttg 489  Q
    |||||||||||||||   ||||||||| |||||||  ||| ||||||||||  ||||||||| |||||||||||  | ||||| || ||||||||||||     
T  20040345 ctagggtatgtttttattttgttttgttatgatgtatgtttccatgagcaaataaacctctt-gattagggttcaactatgaaccccttcttatttgtta 20040247  T
Q  490 gattctattaataaag 505  Q
    ||||| | ||||||||    
T  20040246 gattcaactaataaag 20040231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 505
Target Start/End: Original strand, 7142628 - 7142760
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-- 474  Q
    |||| |||||||||||||||||| |||||  | | |||| | || ||||  ||||||||||||||| ||||||||| ||| ||||||||  |||||||      
T  7142628 ttctcttgttctctctagggtatatttttgtaatattttattataatgtatgttgccatgagcaactaaacctctt-gataagggttccaagatgaaccc 7142726  T
Q  475 ---ctttcttatttgttggattctattaataaag 505  Q
       | ||||||||||||||||  |||||||||||    
T  7142727 attcattcttatttgttggatattattaataaag 7142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 20017143 - 20017196
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    |||||||||||||||||||   || |||||||||||||||||||||| ||||||    
T  20017143 tcaatggttcttagaaggttcttgaagacaatacaaagtgaagaaaattcattt 20017196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 20446384 - 20446445
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || ||||||||||||||||| |||||||||||    
T  20446384 attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaaaaaaaatcattt 20446445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 458
Target Start/End: Complemental strand, 18468269 - 18468177
Alignment:
Q  366 aggatccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgatta 458  Q
    ||||| |||| |||| ||||||||| ||||||||||||||| |||||||| | ||||  |  |||||||| |||||| ||| ||||| |||||    
T  18468269 aggattcatcattcttttgttctctttagggtatgtttttctattgttttcttatgacatttgttgccataagcaactaaaactcttagatta 18468177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 505
Target Start/End: Complemental strand, 7326487 - 7326392
Alignment:
Q  412 ttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    ||||||||||||||  ||||||||| | ||| |||||||| |  ||||||||||| |||||||| | | |||||||||||||||  ||||||||||    
T  7326487 ttttgtaatgatgtttgttgccatgtgtaactaaacctctctttattagggttccacgatgaacatgtacttatttgttggatttaattaataaag 7326392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 505
Target Start/End: Complemental strand, 20050498 - 20050384
Alignment:
Q  391 ctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttg 489  Q
    |||||||||||||||   || | |||| |||||||  ||| ||||||||||  ||||||||| |||||||||||| | |||||||  ||||||||||||     
T  20050498 ctagggtatgtttttattttatgttgttatgatgtatgtttccatgagcaaataaacctctt-gattagggttccactatgaaccccttcttatttgtta 20050400  T
Q  490 gattctattaataaag 505  Q
    ||||| | ||||||||    
T  20050399 gattcaactaataaag 20050384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 4828986 - 4829076
Alignment:
Q  37 tcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggt 127  Q
    ||||||||| ||| || ||||||||||||||||||| || |||||| || |||||||| || | ||||  ||||||| |  ||||||||||    
T  4828986 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaacggccgaaaaagggt 4829076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 17880485 - 17880419
Alignment:
Q  370 tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatg 436  Q
    |||||| | ||||||||||||||| ||||||||||   ||| ||||||||||||||  |||||||||    
T  17880485 tccatcctcctattgttctctctatggtatgttttattattattttgtaatgatgtttgttgccatg 17880419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 318
Target Start/End: Original strand, 21472264 - 21472302
Alignment:
Q  280 taaatagagacccttgcacactctttgattcattcagaa 318  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  21472264 taaatagagacccttgcacactattttattcattcagaa 21472302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 10670499 - 10670446
Alignment:
Q  29 tcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||||||||||||||| |    ||||||||||||||||| |||||||||||    
T  10670499 tcaatggttcttagaaggttttctaagacaatacaaagtgaataaaaatcattt 10670446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 4977716 - 4977641
Alignment:
Q  58 aatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttgaaaac 134  Q
    |||||||| |||| |||| ||||||||| | |||||||||||||||||  |||||| |  ||||||| |||||||||    
T  4977716 aatacaaaatgaacaaaattcatttgaagt-ccaaggcatcacaagacggaagaacgggcgaaaaagtgttgaaaac 4977641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 20040456 - 20040416
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaa 318  Q
    |||||||||||| ||||||||||| ||| ||||||||||||    
T  20040456 tataaatagagatccttgcacactattttattcattcagaa 20040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 20050609 - 20050569
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaa 318  Q
    |||||||||||||||||| ||||| ||| ||||||||||||    
T  20050609 tataaatagagacccttgtacactattttattcattcagaa 20050569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 569 - 601
Target Start/End: Complemental strand, 21536892 - 21536860
Alignment:
Q  569 cttagatggagcaatattaagattgacaaccct 601  Q
    ||||||||||||||||||| |||||||||||||    
T  21536892 cttagatggagcaatattaggattgacaaccct 21536860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 241 - 503
Target Start/End: Original strand, 18474642 - 18474910
Alignment:
Q  241 ctattttcactctcttaatcct--taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaa 338  Q
    |||||||||||||||||||||   || |||||||| || |||||||||||||   || ||||||||| |||||||| ||| ||||| ||||||||||||     
T  18474642 ctattttcactctcttaatccccctacgtaatcatccattataaatagagacaaatgaacactctttcattcattctgaaagctagaggtacaaggcaag 18474741  T
Q  339 ggtcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatg 436  Q
    |||||| |||||  ||||||||||||||| |  |||||| | || || ||||||| ||||| | |||||| |||| |||||||||||||| |||   |||    
T  18474742 ggtcaagcatcaggagtttcaaggcagagtatctccatcctcctcttattctctccagggtttatttttctattggtttgtaatgatgtctgtttttatg 18474841  T
Q  437 agcaacaaaacctcttcgattagggttcctcgatgaa--cctttcttatttgttggattctattaataa 503  Q
    |||||| ||||||||| ||||| |||||| |||||||  ||||  || ||||||||||| |||||||||    
T  18474842 agcaactaaacctctttgattatggttccacgatgaaccccttatttttttgttggattgtattaataa 18474910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 14280820 - 14280696
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||| ||||||||| ||||| |||||| ||||||| || ||||    
T  14280820 ttgttctctctagggtatgtttttctattgctttgtaatggtgtcggttgccataagcaactaaacctctttgattaaggttccacgatgaaccccttct 14280721  T
Q  481 tatttgttggattctattaataaag 505  Q
    |||||||||||||||||||||||||    
T  14280720 tatttgttggattctattaataaag 14280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 242 - 498
Target Start/End: Original strand, 26298220 - 26298478
Alignment:
Q  242 tattttcactctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggt 341  Q
    ||||||| ||||||||| || |||| |||||| || ||||||||||||| |||||||||||||| ||| ||| |||| ||||| | |||||| ||| |||    
T  26298220 tattttccctctcttaacccctaaggaatcatgcattataaatagagactcttgcacactcttttattaattgagaaagctagtgctacaagtcaagggt 26298319  T
Q  342 caatcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagc 439  Q
    ||| |||||  || ||||||| ||||||||  |||| | || ||||| |||||   ||||||| ||| |||||||||||||||||| |||||||||||      
T  26298320 caagcatcatgagcttcaaggaagaggatcttcatcctcctcttgttgtctctcaagtatgttattctattgttttgtaatgatgttggttgccatga-t 26298418  T
Q  440 aacaaaacctcttcgattagggttcctcgatg-aacctttcttatttgttggattctatt 498  Q
    |||||||  |||| |||||||||||| ||||| | || ||| ||||||||||||||||||    
T  26298419 aacaaaatatctttgattagggttccacgatgtaccccttcatatttgttggattctatt 26298478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 263 - 503
Target Start/End: Complemental strand, 21828852 - 21828608
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||| ||  |||||||||||||||||||| ||| || || |||||||||||| |||||||| |||| |||| |||||| ||| |  || |||||||    
T  21828852 taagtaatgatgaactataaatagagacccttgtacattcatttattcattcagaaagctagcggcacaatgcaagggtcaagcat-aagagcttcaagg 21828754  T
Q  363 cagagga--tccatctttctattgttctctctaggg--tatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgatta 458  Q
    || ||||  |||||||| || |||||||||||||||  | | |||||| ||||||| ||||||||||| ||||||||| ||||| ||||||||| ||| |    
T  21828753 caaaggatctccatcttcctcttgttctctctagggaatttttttttctattgtttggtaatgatgtcagttgccatgtgcaactaaacctctttgatca 21828654  T
Q  459 gggttcctcgatgaacct-ttcttatttgttggattctattaataa 503  Q
     ||||||  ||||||||| ||||||||| | |||||| ||||||||    
T  21828653 aggttccatgatgaacctcttcttatttttgggattcaattaataa 21828608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 278 - 505
Target Start/End: Original strand, 11475335 - 11475564
Alignment:
Q  278 tataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--catc 375  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||| |||||||| | |||| ||||| ||| ||||||| | ||||||   |||    
T  11475335 tataaatagagactcttgcacactcttttattcattcagaaagctagcggtgcaaggcaaggatcaagcatca-aagcttcaaggtaaaggatctttatc 11475433  T
Q  376 tttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-c 474  Q
     ||   |||||||||||| |||||||||||  |||||||||||||||| |  ||||||||  ||||| ||||||||   ||||||||||| ||||||| |    
T  11475434 cttaccttgttctctctaaggtatgtttttatattgttttgtaatgatatatgttgccatctgcaactaaacctctctaattagggttccacgatgaacc 11475533  T
Q  475 ctttcttatttgttggattctattaataaag 505  Q
    | || |||||| ||| |||| ||||||||||    
T  11475534 ccttgttattttttgtattccattaataaag 11475564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 356 - 505
Target Start/End: Complemental strand, 8401963 - 8401811
Alignment:
Q  356 ttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttc 453  Q
    |||| |||||||||||  |||| | || ||||| ||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||| |||| | ||     
T  8401963 ttcatggcagaggatcttcatcctcctcttgttatctctagggtatgtttttatattgttttgtaataatgtcggttgccatgtgcaactaaactttttt 8401864  T
Q  454 gattagggttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
     ||||||||||| ||||||| || |||||||||||||||||| ||||||||||    
T  8401863 tattagggttccacgatgaaccccttcttatttgttggattcaattaataaag 8401811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 22488399 - 22488276
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttct 480  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||| |||| |||||||||| |||||| |||||||| | ||||    
T  22488399 ttgttctctctaggatatgtttttcaattgttttgtaatgatgtcggttttcatgagaaactaaacttcttcgattatggttccacgatgaactccttct 22488300  T
Q  481 tatttgttggattctattaataaag 505  Q
    ||||| |||||||| || |||||||    
T  22488299 tattt-ttggattccatgaataaag 22488276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 241 - 503
Target Start/End: Complemental strand, 19542766 - 19542500
Alignment:
Q  241 ctattttcactctcttaatcct-taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaag 339  Q
    |||||||||||||||||| ||  ||  | ||||| || ||||||||||||| | || ||||||||| |||||||| ||| ||| | |||||||||||| |    
T  19542766 ctattttcactctcttaaccccgtatatgatcatgcattataaatagagacacatgaacactctttcattcattctgaaagcttgaggtacaaggcaagg 19542667  T
Q  340 gtcaatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatga 437  Q
    ||||| ||| | |||||| ||||||||| |  |||||| | || |||||||||||||||||| |||||| | |  ||| |||||||||  |||   ||||    
T  19542666 gtcaagcattataagttttaaggcagagtatctccatcctcctcttgttctctctagggtatatttttctactagtttataatgatgtttgtttttatga 19542567  T
Q  438 gcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataa 503  Q
     |||| ||| ||||| |||||||||||| ||||||| || || || ||||||||||| |||||||||    
T  19542566 acaactaaatctctttgattagggttccacgatgaaccccttattttttgttggattgtattaataa 19542500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 18474352 - 18474509
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaa 120  Q
    |||||| ||||||||| |||||||||||| || |||||||||||||||||||||| |||||| || |||||| ||||  |||||| |||||||    |||    
T  18474352 attgaatttcaatggtacttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaatgcattgcaagacgaaagaacgagcgaa 18474451  T
Q  121 aaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcat 179  Q
    |||||| | |||||||   |||||||  |||||||||||||| |||||||||| |||||    
T  18474452 aaaggg-taaaaactgttgaattcgcataggaggggctgcctgatgcgcccctacgcat 18474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 503
Target Start/End: Complemental strand, 19218856 - 19218602
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| ||||||||||||||   ||||||||||||||||||| ||||  | | ||||||| | || |||| |||| |||| ||| |||||| |||||    
T  19218856 tctcttaaaccttaagtaatcatattctataaatagagacccttgtacacattcttattcattaataaagctaacggttcaagacaagggtcaagcatca 19218757  T
Q  351 caagtttcaaggcagagga--tccatctttctattgttctctctagggtat-gtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaac 447  Q
     |   |||||||||||| |  |||||| | || ||||||||||||| ||||  |||||| |||||||||| |||| ||  |||| |||| ||||| ||||    
T  19218756 ga--gttcaaggcagagtatctccatcctcctcttgttctctctagagtatcctttttctattgttttgttatgaagtatgttgtcatgtgcaactaaac 19218659  T
Q  448 ctcttcgattagggttcctcgatgaa-cctttcttatttgttggattctattaataa 503  Q
    ||||| |||||||||||    ||||| | ||||||||||||||||||| ||||||||    
T  19218658 ctctttgattagggttctaacatgaagcttttcttatttgttggattccattaataa 19218602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 251 - 504
Target Start/End: Original strand, 10342207 - 10342463
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| || |||||||||||| |||||||||| |||| ||||||||   | | ||| |||||||| | ||| ||| ||| || | |||||| |||||    
T  10342207 tctcttaaaccctaagtaatcatttactataaatatagactcttgcacatattattattaattcagaaagttagtggttcaaagcgagggtcaaacatca 10342306  T
Q  351 caagtttcaaggcagaggat--ccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     |  |||||||||||| |||  ||||| | || |||||||||||||||||| |||||| ||| |||||| |||||||  |||| |||||| ||| | |||    
T  10342307 gagttttcaaggcagatgatttccatcctcctcttgttctctctagggtatatttttctattattttgttatgatgtatgttgtcatgagaaactacacc 10342406  T
Q  449 tcttcgattagggttcctcgatgaac-ctttcttatttgttggattctattaataaa 504  Q
    |||| | |||||||||   ||||||| | |||||||||||||| ||| | |||||||    
T  10342407 tctttggttagggttctaagatgaacaccttcttatttgttggtttcaaataataaa 10342463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 392 - 505
Target Start/End: Original strand, 26419343 - 26419458
Alignment:
Q  392 tagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcg-attagggttcctcgatgaa-cctttcttatttgttg 489  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||| |||| | |||| |||||| ||||||| || |||||||||||||    
T  26419343 tagggtatgtttttctattgttttgtaatgatgttggttgccatgtgcaactaaacatctttgtattacggttccacgatgaaccccttcttatttgttg 26419442  T
Q  490 gattctattaataaag 505  Q
    ||||| ||||| ||||    
T  26419443 gattcaattaaaaaag 26419458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 505
Target Start/End: Complemental strand, 5632154 - 5632021
Alignment:
Q  372 catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatg 471  Q
    |||| |||| ||||||| || ||| |||||||| | |||||||||||||||| ||| || ||||||| ||| |||| |||| |||||||||||| ||||     
T  5632154 catccttctcttgttctttccaggttatgtttt-ctattgttttgtaatgatatcgatttccatgagaaactaaacttctttgattagggttccacgata 5632056  T
Q  472 aa-cctttcttatttgttggattctattaataaag 505  Q
    || |||||||||||||||||||||  |||||||||    
T  5632055 aaccctttcttatttgttggattccgttaataaag 5632021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 19543056 - 19542966
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaaga 111  Q
    |||||| |||||| ||||||||||||||| || |||||||||||||||||||||| |||||| || |||||||||||  |||||| |||||    
T  19543056 attgaatttcaatagttcttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaaggcattgcaagacgaaaga 19542966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 19219149 - 19219071
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaag 93  Q
    ||||| ||||||| ||||||||||||||||||| | || ||||||||||||||||| |||| |||||| || |||||||    
T  19219149 atgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtgaataaaattcatttcaaattccaag 19219071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 33578223 - 33578301
Alignment:
Q  266 gtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaa 344  Q
    ||||| || |||||||||||||||| ||||||||| |||| ||||||| |||| ||||||||| |||||||| ||||||    
T  33578223 gtaatgatacactataaatagagacacttgcacacacttttattcatttagaaagctagcggttcaaggcaatggtcaa 33578301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 27415702 - 27415825
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||||||||| |||||| |||||| |||||||||| ||| |||   |||||||||| ||| ||||| ||||||||| |||||   |||||| || ||||    
T  27415702 ttgttctctctggggtatctttttctattgttttgttatggtgtatattgccatgagtaactaaaccgcttcgatta-ggttctaagatgaaccccttct 27415800  T
Q  481 tatttgttggattctattaataaag 505  Q
    |||||||||||||| ||| ||||||    
T  27415801 tatttgttggattcaatttataaag 27415825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 19285562 - 19285667
Alignment:
Q  264 aagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggc 363  Q
    ||||||| || ||||||||||| ||||| ||| ||||||||| |||||||||||| ||||  |||||||||||| |||||| ||||   || ||||||||    
T  19285562 aagtaatgatgcactataaataaagacctttg-acactcttttattcattcagaaagctaatggtacaaggcaagggtcaaacatc-ggagcttcaaggc 19285659  T
Q  364 agaggatc 371  Q
    ||||||||    
T  19285660 agaggatc 19285667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 33914132 - 33914010
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttctt 481  Q
    ||||||| | ||||||||||||||  | |||||||| |  ||||  ||||||| ||||||| ||||||||| ||||||| || |  |||||||| |||||    
T  33914132 ttgttctttttagggtatgtttttataatgttttgttacaatgtttgttgccacgagcaactaaacctctt-gattaggctttcaagatgaacccttctt 33914034  T
Q  482 atttgttggattctattaataaag 505  Q
    ||||||| || |||||||||||||    
T  33914033 atttgttcgaatctattaataaag 33914010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 11521775 - 11521884
Alignment:
Q  395 ggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttcttatttgttggatt 493  Q
    |||||||||||  |||||||| | |||||||| ||||||||||||||| ||||||||| |||||||| |||  | ||||| |  |||||||||||||| |    
T  11521775 ggtatgtttttatattgtttttttatgatgtctgttgccatgagcaactaaacctctt-gattagggatccatgttgaactcgatcttatttgttggaat 11521873  T
Q  494 ctattaataaa 504  Q
     ||||||||||    
T  11521874 ttattaataaa 11521884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 28731142 - 28731064
Alignment:
Q  397 tatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    |||||||||| ||||||||||||||||||  |||| |||| | | | ||||||||| |||||||||||| |||||||||    
T  28731142 tatgtttttctattgttttgtaatgatgtatgttgtcatgtgtagctaaacctctttgattagggttccgcgatgaacc 28731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 22489730 - 22489621
Alignment:
Q  262 ttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaag 361  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||| |||||||   ||  ||||||||||||| |||  ||||| ||| || || |||||     
T  22489730 ttaagtaatcatgcactataaatagagaccattgcacactattttattcattttaaaatctagcggtacaagacaagagtcaagcattacgagcttcaaa 22489631  T
Q  362 gcagaggatc 371  Q
    | ||||||||    
T  22489630 gtagaggatc 22489621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 2729122 - 2729002
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttct 480  Q
    |||||||||||| ||||| |||||| | |||||||| |||||    |||||||||| |||| ||||||||| ||||||||||    ||||||| |  | |    
T  2729122 ttgttctctctatggtatatttttctactgttttgttatgat----gttgccatgaacaactaaacctctttgattagggttataagatgaactccattt 2729027  T
Q  481 tatttgttggattctattaataaag 505  Q
    |||||||||||||| ||||||||||    
T  2729026 tatttgttggattcaattaataaag 2729002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 20892102 - 20892212
Alignment:
Q  241 ctattttcactctcttaatc-cttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaag 339  Q
    |||||||||||| ||||| | | |||| |||||| |||||||||||| ||  |||||||||| ||| |   ||||| || |||||||||||||||||| |    
T  20892102 ctattttcactcccttaaccacctaagcaatcatgcactataaatagtgaatcttgcacactattttaactattcataaagctagcggtacaaggcaagg 20892201  T
Q  340 gtcaatcatca 350  Q
    ||||| |||||    
T  20892202 gtcaagcatca 20892212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 505
Target Start/End: Original strand, 25883651 - 25883764
Alignment:
Q  392 tagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttgg 490  Q
    ||||||||||||||| |||||||||| |  ||||  ||||||||||||||| |||||||||  |||| | |||| |||||||||| |||| |||||||      
T  25883651 tagggtatgtttttctattgttttgttactatgtatgttgccatgagcaactaaacctctt-aattatgattccacgatgaacctcttctcatttgttca 25883749  T
Q  491 attctattaataaag 505  Q
    | | |||||||||||    
T  25883750 aatttattaataaag 25883764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 505
Target Start/End: Complemental strand, 23907804 - 23907695
Alignment:
Q  398 atgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctc-ttcgattagggttcctcgatgaacct-ttcttatttgttggattct 495  Q
    |||| |||| ||||||||||| |||||||| || ||||| | ||| ||||||| || |||||||||||  |||||||| | | |||||||||||||||      
T  23907804 atgtgtttctattgttttgtattgatgtcgattaccatgtgtaactaaacctcttttgattagggttcaacgatgaacttctacttatttgttggattta 23907705  T
Q  496 attaataaag 505  Q
    ||||||||||    
T  23907704 attaataaag 23907695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 25883285 - 25883346
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || |||||||||||||||||||||| ||||||    
T  25883285 attgaagatcaagggttcttagaaggttgttgaagacaatacaaagtgaagaaaattcattt 25883346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 503
Target Start/End: Complemental strand, 19263415 - 19263295
Alignment:
Q  385 ttctctctagggtatg-tttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttctta 482  Q
    |||||||||| ||||  |||||| |||||| ||| |||||||   |||  ||| ||||| | ||||||| |||||||||||   ||||||||| ||||||    
T  19263415 ttctctctagagtatcctttttccattgttctgttatgatgttttttgtaatgtgcaactacacctctttgattagggttctaagatgaacctcttctta 19263316  T
Q  483 tttgttggattctattaataa 503  Q
    |||||||||||||| ||||||    
T  19263315 tttgttggattctagtaataa 19263295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 26419202 - 26419282
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtaca 331  Q
    |||||||||| ||| | ||| || ||||||||||||||||||||  ||||| ||  |||||||||||| | ||||||||||    
T  26419202 tctcttaatcattacgcaatgatgcactataaatagagacccttttacactattatattcattcagaaagatagcggtaca 26419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 27374347 - 27374275
Alignment:
Q  55 gacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggt 127  Q
    ||||||||| ||||||||||| |||||| ||  |||||||  |||||||||| ||||||  ||||||||||||    
T  27374347 gacaatacagagtgaagaaaattcatttaaagatccaaggtgtcacaagacagaagaacgcttgaaaaagggt 27374275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 33578358 - 33578469
Alignment:
Q  396 gtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttcttatttgttggatt 493  Q
    ||||||||||| | ||||||| ||||||||| ||| ||||| | | | |||||||| | ||||||| |||| |||||||||| | ||||||  |||||||    
T  33578358 gtatgtttttctactgttttgcaatgatgtcagttaccatgtgtagctaaacctctcttgattaggattccacgatgaacctctacttattcattggatt 33578457  T
Q  494 ctattaataaag 505  Q
    | ||||||||||    
T  33578458 caattaataaag 33578469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 11521658 - 11521696
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattca 315  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  11521658 ctataaatagagacccttgcacactattttattcattca 11521696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 10341969 - 10342030
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| ||| ||||||||||||||| | || ||||||||||||||||  |||| ||||||    
T  10341969 attgaagatcagtggttcttagaaggtttttgaagacaatacaaagtgagaaaaactcattt 10342030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 11475039 - 11475084
Alignment:
Q  31 aatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaa 76  Q
    ||||||||||||||| ||| || ||||||||||||||||| |||||    
T  11475039 aatggttcttagaagatatttgaagacaatacaaagtgaaaaaaaa 11475084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 28422629 - 28422685
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaaga 72  Q
    ||||| |||||||||||||| |  ||||||||||| || |||||||||||||||||||    
T  28422629 atgaagattgaagttcaatgatg-ttagaaggtatttgaagacaatacaaagtgaaga 28422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 16970898 - 16970958
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattca 311  Q
    |||||||| || |||||||||||   |||||||||||||||||| ||||| |||| |||||    
T  16970898 tctcttaaaccctaagtaatcatatgctataaatagagacccttacacacacttttattca 16970958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 277 - 494
Target Start/End: Complemental strand, 11397 - 11178
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggat--ccat 374  Q
    |||||||||||||||||||||||   ||| |||||||||||| |||| || |||||||||| |||||| ||||| ||||| ||||| |||||||  ||||    
T  11397 ctataaatagagacccttgcacatatttttattcattcagaaagctaacgttacaaggcaagggtcaagcatca-aagttccaaggtagaggatatccat 11299  T
Q  375 ctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac 474  Q
    | | || ||||||||||||| ||||||||||| |||||||||||| |||||  ||| ||||| ||| | ||||||||| |||||||||||   || ||||    
T  11298 cctcctcttgttctctctagtgtatgtttttctattgttttgtaacgatgtatgtttccatgtgcacctaaacctctttgattagggttctaagaagaac 11199  T
Q  475 ct-ttcttatttgttggattc 494  Q
    || ||||||||| ||||||||    
T  11198 ctattcttattttttggattc 11178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 277 - 492
Target Start/End: Complemental strand, 8367 - 8150
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggat--ccat 374  Q
    ||||||||||||||||||||| ||  ||| |||||||||||| ||||  | ||||| |||| |||||| ||||| | ||| ||||| |||||||  ||||    
T  8367 ctataaatagagacccttgcagacatttttattcattcagaaagctaatgttacaacgcaagggtcaagcatcaga-gttccaaggtagaggatatccat 8269  T
Q  375 ctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac 474  Q
    | | || ||||||||||||| ||||||||||| ||||||||||||  ||||  ||| ||||| ||||| |||||| || |||||||||||   || ||||    
T  8268 cctcctcttgttctctctagtgtatgtttttctattgttttgtaacaatgtatgtttccatgtgcaactaaacctatttgattagggttcgaagaagaac 8169  T
Q  475 ct-ttcttatttgttggat 492  Q
    || ||||||||| ||||||    
T  8168 ctcttcttattttttggat 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 3581 - 3854
Alignment:
Q  241 ctattttcactctcttaat----ccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggca 336  Q
    |||||||||||||||||||    || |||||||| || |||||||||||||||||||||||||||  || ||||||||| ||  ||||||||||| || |    
T  3581 ctattttcactctcttaattatcccctaagtaattatgcactataaatagagacccttgcacactagtttattcattcataaaactagcggtacagggta 3680  T
Q  337 aagg-tca-atcatcacaagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgc 432  Q
    | || ||| | |||||   | ||||| ||||||||||  |||| | || ||||||||||||| | ||| ||||| ||| ||||||||||||||||||| |    
T  3681 aggggtcagagcatcatcggcttcaaagcagaggatctccatcctcctcttgttctctctagagaatgattttctattattttgtaatgatgtcggttac 3780  T
Q  433 catgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
    |||||||||| |||| |||| | ||| ||||||  ||||||||| |||||||||||||||||| ||||| ||||    
T  3781 catgagcaaccaaacttctttgtttatggttccaagatgaacctcttcttatttgttggattccattaacaaag 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 1999 - 2073
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaaga 104  Q
    |||||||| ||||||| | |||| ||| |||||||||||||||||| | |||| || ||||||||| ||||||||    
T  1999 caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaaga 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 241 - 505
Target Start/End: Original strand, 12713 - 12987
Alignment:
Q  241 ctattttcactctcttaat-----ccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggc 335  Q
    |||||||||||||||||||     ||| ||||||| || ||||||||||||||||||||||||||   || |||||||||||| ||||||||||||||||    
T  12713 ctattttcactctcttaattaacccctaaagtaattatgcactataaatagagacccttgcacaccagtttattcattcagaaagctagcggtacaaggc 12812  T
Q  336 aaaggt--caatcatcacaagtttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttg 431  Q
    || |||   || |||||   | ||||| ||||||||  |||||| | || ||||||||||||| | ||| ||||| ||| |||||||||||||||||||     
T  12813 aagggttcaaagcatcatcggcttcaaagcagaggatctccatcctcctcttgttctctctagagaatgattttctattattttgtaatgatgtcggttt 12912  T
Q  432 ccatgagcaacaaaacctcttcgattagggttcctcgatgaacc-tttcttatttgttggattctattaataaag 505  Q
    ||||||||||| |||| | || | ||| |||||| | |||| ||  |||||||||||||||||| ||||| ||||    
T  12913 ccatgagcaaccaaacttgtttgtttatggttccacaatgagccacttcttatttgttggattccattaacaaag 12987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 12435 - 12509
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaaga 104  Q
    |||||||| ||||||| | |||| ||| |||||||||||||||||| | |||| || ||||||||| ||||||||    
T  12435 caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaaga 12509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 228124 - 227961
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaact 114  Q
    |||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||| |||||| || ||||||| |||  ||||||  ||||||     
T  228124 atgaatattgaaga-caatggttcttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaagacattgcaagacggaagaacg 228026  T
Q  115 gttgaaaaagggttgaaaactgcataattcgcgcaggaggggctgcctcatgcgcccctgcgcat 179  Q
    | ||||||||||| ||||| |||  |||||||||||||| ||||| |||| |||||| |||||||    
T  228025 ggtgaaaaagggtcgaaaattgctgaattcgcgcaggagaggctgtctcaagcgcccgtgcgcat 227961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 441
Target Start/End: Complemental strand, 227729 - 227668
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgt--aatgatgtcggttgccatgagcaa 441  Q
    ||||||||||||| ||||||||||||||||||||||   |||||||||||| ||||||||||    
T  227729 ttgttctctctagagtatgtttttcaattgttttgttatatgatgtcggtttccatgagcaa 227668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 33275 - 33151
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||  ||| || |||||| ||||||||||||  |||||| || ||||    
T  33275 ttgttctctctagagtatctttttctattgttttgtaatgatgtcggttgccatgataaactaatcctctttgattagggttccatgatgaagcccttct 33176  T
Q  481 tatttgttggattctattaataaag 505  Q
    ||||||||||||||| |||||||||    
T  33175 tatttgttggattcttttaataaag 33151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 5e-27; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 263 - 505
Target Start/End: Original strand, 22262843 - 22263086
Alignment:
Q  263 taagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaagg 362  Q
    |||||||| || ||| |||||||||||| ||||||||| |||| ||||||| |||| ||||||||| |||||||| |||||| |||||  || |||||||    
T  22262843 taagtaatgatgcaccataaatagagactcttgcacacacttttattcattgagaaagctagcggttcaaggcaagggtcaagcatca-tagcttcaagg 22262941  T
Q  363 cagaggat--ccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagg 460  Q
     |||||||  ||||| |  | || || ||||||  ||||||||||| ||||||||||||||||||  ||| ||||| | || | ||| |||| |||||||    
T  22262942 tagaggatcgccatcctcttcttattttctctaatgtatgtttttctattgttttgtaatgatgtacgttaccatgtgtaa-ataacgtctttgattagg 22263040  T
Q  461 gttcctcgatgaa-cctttcttatttgttggattctattaataaag 505  Q
    |||||   ||||| |||||||||||||||| |||| || |||||||    
T  22263041 gttccaatatgaaccctttcttatttgttgaattcaatgaataaag 22263086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 251 - 505
Target Start/End: Complemental strand, 9396264 - 9396001
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    |||||||| ||||||| ||| || ||||||||||| |||| | ||||||| || | ||||||||| || | ||| |||||||||||| |||||| ||| |    
T  9396264 tctcttaaaccttaagaaatgatgcactataaatatagactcgtgcacacactcttattcattcaaaaagatagtggtacaaggcaagggtcaagcatta 9396165  T
Q  351 caagtttcaaggcagaggatc--------catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaac 442  Q
     | | ||||||| |||||||         | || | || |||||||||  ||| ||||||||||||||||||| |||||||||||||||||||| | |||    
T  9396164 ga-gcttcaaggtagaggattttcctcctcctcctcctcttgttctcttcaggatatgtttttcaattgttttataatgatgtcggttgccatgtgaaac 9396066  T
Q  443 aaaacctct-tcgattagggttcctcgatgaacct-ttcttatttgttggattctattaataaag 505  Q
     |||||||| | ||||| ||||||  ||||||| | |||||| ||||||||||| ||||||||||    
T  9396065 taaacctctcttgattatggttccaagatgaacatcttcttaattgttggattcgattaataaag 9396001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 9725712 - 9725592
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttat 483  Q
    |||| ||| ||||||||||||| |||||||||| |||||||| |||| |||||||||  ||||||||| |||||||||||| ||||||| || |||||||    
T  9725712 ttctttcttgggtatgtttttctattgttttgttatgatgtctgttgtcatgagcaattaaacctctt-gattagggttccacgatgaaccccttcttat 9725614  T
Q  484 ttgttggattctattaataaag 505  Q
    |||||||| | |||||| ||||    
T  9725613 ttgttggaatttattaaaaaag 9725592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 384 - 505
Target Start/End: Complemental strand, 17860009 - 17859887
Alignment:
Q  384 gttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttctta 482  Q
    ||||||| || |||||||||||| ||||||||||||| || |  ||||||||| ||||| ||| ||||| |||||| |||||  ||||||| | ||||||    
T  17860009 gttctctatatggtatgtttttctattgttttgtaatcatatttgttgccatgtgcaactaaaactctttgattagagttccaagatgaacaccttctta 17859910  T
Q  483 tttgttggattctattaataaag 505  Q
    |||||||||||| ||||||||||    
T  17859909 tttgttggattcaattaataaag 17859887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 505
Target Start/End: Complemental strand, 1558394 - 1558244
Alignment:
Q  357 tcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcg 454  Q
    |||||||||||||||  |||| | || ||||| |||||||| ||| |||||| ||| ||||||||||||||||||| |||||| |||  || | |||| |    
T  1558394 tcaaggcagaggatcttcatcatcctcttgttatctctaggatatatttttctattattttgtaatgatgtcggtttccatgaacaaataatcttctttg 1558295  T
Q  455 attagggttcctcgatgaacctttcttatttgttggattctattaataaag 505  Q
    |||| |||||||  ||||||| ||||||||| || ||||  ||||||||||    
T  1558294 attaaggttccttcatgaacccttcttattttttagatttgattaataaag 1558244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 382 - 493
Target Start/End: Original strand, 15349300 - 15349409
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttct 480  Q
    |||||||||||||||||||||||||||||||||||||  |||   |||| || ||  |||| |||||||||||||||||||| | | |||||||| ||||    
T  15349300 ttgttctctctagggtatgtttttcaattgttttgtagcgat---ggtttccgtgcccaactaaacctcttcgattagggtttcacaatgaacctcttct 15349396  T
Q  481 tatttgttggatt 493  Q
    |||||||| ||||    
T  15349397 tatttgtttgatt 15349409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 382 - 493
Target Start/End: Original strand, 15369296 - 15369405
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttct 480  Q
    ||||||||||||| |||||||||||||||||||||||  |||   |||| ||||| ||||| ||||| |||||||||||||| | | |||||||| ||||    
T  15369296 ttgttctctctagagtatgtttttcaattgttttgtagcgat---ggtttccatgcgcaactaaaccccttcgattagggtttcacaatgaacctcttct 15369392  T
Q  481 tatttgttggatt 493  Q
    |||||||| ||||    
T  15369393 tatttgtttgatt 15369405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 505
Target Start/End: Complemental strand, 19670143 - 19670021
Alignment:
Q  383 tgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctttctta 482  Q
    |||||||||||||||||||||||  ||| |||||| ||||| |  |||| |||||||||| ||||||||| | ||||| |||   |||||||| || ||     
T  19670143 tgttctctctagggtatgtttttatattattttgttatgatttttgttgtcatgagcaactaaacctctttgtttaggattctaagatgaacccttattt 19670044  T
Q  483 tttgttggattctattaataaag 505  Q
    |||||||||||| ||||||||||    
T  19670043 tttgttggattcgattaataaag 19670021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 30235899 - 30235778
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaac-ctttct 480  Q
    ||||||||||||||||||||||||| ||||||||   |||||||  |||| | |||||||| ||||| ||| ||| |||||||   ||||||| | ||||    
T  30235899 ttgttctctctagggtatgtttttctattgtttt---atgatgtatgttgtcttgagcaactaaaccactttgatcagggttctaagatgaactcattct 30235803  T
Q  481 tatttgttggattctattaataaag 505  Q
    ||||||||| |||||||||||||||    
T  30235802 tatttgttgaattctattaataaag 30235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 463
Target Start/End: Original strand, 15376020 - 15376101
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggtt 463  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||| |||||   ||| ||||||||| ||||| ||||    
T  15376020 ttgttctctctagggtatgtttttcaattgttttgaaatgatgttggtttccatgccaaactaaacctctttgattatggtt 15376101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 15575529 - 15575621
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    ||||||||||| ||||||||| ||| |||||||| | |||||||  ||||||||||||||| || |||||| |||||||||||| |||||||||    
T  15575529 ttgttctctcttgggtatgttattctattgttttcttatgatgtttgttgccatgagcaactaagcctctt-gattagggttccacgatgaacc 15575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 26499785 - 26499703
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcat 97  Q
    ||||| ||||||| ||||||||||||||||||| | || |||||||||||||| ||||||| |||||| || || ||||||||    
T  26499785 atgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtaaagaaaattcatttcaagtttcaaggcat 26499703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 32930133 - 32930051
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaag 333  Q
    ||||||||| | |||||||| || || ||||||||||||| |||||| || |||| |||||||||||| ||||||||||||||    
T  32930133 tctcttaattcctaagtaatgatccattataaatagagactcttgcatacacttttattcattcagaaagctagcggtacaag 32930051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 17860381 - 17860320
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    |||||||  |||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  17860381 attgaaggacaatggttcttagaaggtttttgtagacaatacaaagtgaagaaaattcattt 17860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 426
Target Start/End: Original strand, 16528129 - 16528279
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatc--cat 374  Q
    ||||||||||||||| ||||||||  | | ||||||| |||| |||||  || ||||| || |||||| |||    |||| ||||||||||||||  |||    
T  16528129 ctataaatagagaccattgcacacattattattcatttagaaagctagttgttcaaggaaagggtcaagcat-tggagttccaaggcagaggatcttcat 16528227  T
Q  375 ctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtc 426  Q
    | | || ||||||||||||||||||||||||  |||||||||| ||||||||    
T  16528228 cctcctcttgttctctctagggtatgtttttgtattgttttgttatgatgtc 16528279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 505
Target Start/End: Complemental strand, 26499515 - 26499261
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatca 350  Q
    ||||||||||||||| | || ||  | ||||||||| ||||||||| | |||||  |||||||||||| ||||| || ||||||||| ||| || |||||    
T  26499515 tctcttaatccttaaattatgatgtattataaatagcgacccttgctctctctt--attcattcagaaagctagaggcacaaggcaagggttaagcatca 26499418  T
Q  351 caagtttcaaggcagaggatc--catctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc 448  Q
     |  || ||||| | | ||||  |||| | || |||||||||||| |||||||||||  |||| |||||||| ||||  |||| |||| ||||| ||| |    
T  26499417 gatctt-caaggaaaatgatctccatcctcctcttgttctctctaaggtatgtttttatattgctttgtaattatgtttgttgtcatgtgcaactaaatc 26499319  T
Q  449 tcttcgattagggttcctcgatg-aacctttcttatttgttggattctattaataaag 505  Q
    |||| ||||| |||| | || || |||| ||||||||||  |||||  ||||||||||    
T  26499318 tctttgattaaggtttcacggtgaaacccttcttatttgcgggattgaattaataaag 26499261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 392 - 505
Target Start/End: Original strand, 15319421 - 15319535
Alignment:
Q  392 tagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttgg 490  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||  |||  |||| | || ||||||||||||  ||| || || |||||| |||||||    
T  15319421 tagggtatacttttcaattgttttgtaatgatgtcggtttccatgtccaattaaacttgtttgattagggttccatgattaaccccttcttacttgttgg 15319520  T
Q  491 attctattaataaag 505  Q
    |||  ||||||||||    
T  15319521 atttaattaataaag 15319535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 505
Target Start/End: Original strand, 30756220 - 30756348
Alignment:
Q  382 ttgttctctctagggtatgtttttca---attgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct- 476  Q
    ||||||||||||| |||||||||||    ||||||||||||||||||  |||| |||| ||||| |||||| | | ||||||||||||  ||| |||||     
T  30756220 ttgttctctctagtgtatgtttttcttgtattgttttgtaatgatgtatgttgtcatgtgcaactaaacctttcttgattagggttccaagataaaccta 30756319  T
Q  477 ttcttatttgttggattctattaataaag 505  Q
    || |||||||||| |||| ||||||||||    
T  30756320 tttttatttgttgtattcaattaataaag 30756348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 15318651 - 15318687
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgta 418  Q
    |||||||||||||||||||||||||||||||||||||    
T  15318651 ttgttctctctagggtatgtttttcaattgttttgta 15318687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 505
Target Start/End: Original strand, 15386496 - 15386612
Alignment:
Q  390 tctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgtt 488  Q
    ||||||||||  ||||||||||||||| ||||||||||||| | |||   ||| |||| | || |||| |||||||  ||| ||||| ||||||||||||    
T  15386496 tctagggtatacttttcaattgttttgcaatgatgtcggtttctatgtcgaactaaacttgttagattcgggttccatgattaacctcttcttatttgtt 15386595  T
Q  489 ggattctattaataaag 505  Q
    |||||  ||||||||||    
T  15386596 ggatttaattaataaag 15386612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 505
Target Start/End: Original strand, 16439932 - 16440056
Alignment:
Q  383 tgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacct-ttct 480  Q
    ||||||||| ||| |||||||||  ||| ||||||||| ||||  ||||||||| | ||  |||||||| |||| |||| || |  ||||||||| ||||    
T  16439932 tgttctctccaggatatgtttttatattattttgtaataatgtttgttgccatgtgaaattaaacctctatcgaataggatttcaagatgaacctcttct 16440031  T
Q  481 tatttgttggattctattaataaag 505  Q
    |||||||||||||| ||||||||||    
T  16440032 tatttgttggattcaattaataaag 16440056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 391 - 505
Target Start/End: Original strand, 15370060 - 15370175
Alignment:
Q  391 ctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttg 489  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||   |||  |||| | || ||||| ||||||  ||| || || |||||||||||||    
T  15370060 ctagggtatacttttcaattgttttgtaatgatgtcggtttccatatccaattaaacttgtttgattatggttccatgattaaccccttcttatttgttg 15370159  T
Q  490 gattctattaataaag 505  Q
    ||||  ||||||||||    
T  15370160 gatttaattaataaag 15370175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 24507366 - 24507263
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttg 129  Q
    |||||||| ||||||| | |||| ||| |||||||||||||||||| | |||| || ||||||||| |||||||| | |||||  |  |||||||||| |    
T  24507366 caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatagaagaagggccgaaaaagggtcg 24507267  T
Q  130 aaaa 133  Q
    ||||    
T  24507266 aaaa 24507263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 15575106 - 15575167
Alignment:
Q  21 attgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||||| |||| ||||||||||||||   || |||||||||||||||||||||| ||||||    
T  15575106 attgaagatcaagggttcttagaaggtcgttgaagacaatacaaagtgaagaaaattcattt 15575167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 16174883 - 16174758
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatga-acctttc 479  Q
    |||||||||||| ||||| |||||| ||| |||| |||||||||  ||| ||||| ||||| ||| |||| | ||||||| ||||   ||||  ||||||    
T  16174883 ttgttctctctacggtatatttttctattattttataatgatgtatgttaccatgtgcaactaaatctctcttgattaggattccaatatgacccctttc 16174784  T
Q  480 ttatttgttggattctattaataaag 505  Q
    |||||| |||||||| ||||||||||    
T  16174783 ttatttcttggattcaattaataaag 16174758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 313
Target Start/End: Complemental strand, 12971999 - 12971952
Alignment:
Q  266 gtaatcattcactataaatagagacccttgcacactctttgattcatt 313  Q
    ||||| || ||||||||||||||||||||||| ||||||| |||||||    
T  12971999 gtaatgatgcactataaatagagacccttgcagactcttttattcatt 12971952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 30355493 - 30355560
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| ||||||| ||||| ||||||||||||| | || |||||||| |||||||| |||| ||||||    
T  30355493 atgaagattgaagatcaatcgttcttagaaggtttttgaagacaataaaaagtgaataaaattcattt 30355560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 501
Target Start/End: Complemental strand, 13723387 - 13723277
Alignment:
Q  392 tagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttcttatttgttgg 490  Q
    |||||||| |||||| |||||||||| |||||||  |||| |||| ||||| ||| |  || |||| ||||||  ||||||| ||  |||||||| ||||    
T  13723387 tagggtatatttttctattgttttgttatgatgtttgttgtcatgtgcaactaaatcaatttgatttgggttctacgatgaatccaatcttattttttgg 13723288  T
Q  491 attctattaat 501  Q
    |||||||||||    
T  13723287 attctattaat 13723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 15376317 - 15376363
Alignment:
Q  389 ctctagggtatgtttttcaattgttttgtaatgatgtcggttgccat 435  Q
    |||||||||||  |||||||||||||||||||||||| |||| ||||    
T  15376317 ctctagggtatacttttcaattgttttgtaatgatgttggtttccat 15376363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 17198469 - 17198383
Alignment:
Q  251 tctcttaatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaa 337  Q
    |||||||| || |||||||| ||  | | |||||||||||||||||| ||||||| ||||||| | ||  |||||| ||||||||||    
T  17198469 tctcttaacccctaagtaatgatgtattctaaatagagacccttgcatactcttttattcatttataaaactagcgatacaaggcaa 17198383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 493
Target Start/End: Original strand, 28178575 - 28178684
Alignment:
Q  385 ttctctctagggtatgttttt-caattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttctta 482  Q
    ||||||||||| ||||||||| | ||| |||||||| |||| || ||||||| |||||| |||| | ||  |||||| |||| ||||||| || ||||||    
T  28178575 ttctctctagg-tatgttttttctatttttttgtaaagatgccgattgccattagcaactaaactttttttattaggtttccacgatgaaacccttctta 28178673  T
Q  483 tttgttggatt 493  Q
    |||||||||||    
T  28178674 tttgttggatt 28178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 505
Target Start/End: Complemental strand, 10976598 - 10976473
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctct-tcgattagggttcctcgatgaacctttct 480  Q
    |||||||||||| ||| | ||||||  |||||||  ||||||| |||||| ||||| |||  |||| ||| | |||||||||||| | ||||| || |||    
T  10976598 ttgttctctctaaggtttatttttctgttgtttttcaatgatgccggttgtcatgaacaattaaacatctcttgattagggttccacaatgaatctctct 10976499  T
Q  481 -tatttgttggattctattaataaag 505  Q
     |||||||| ||||| ||||||||||    
T  10976498 ctatttgttagattcaattaataaag 10976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 416
Target Start/End: Original strand, 15382276 - 15382305
Alignment:
Q  387 ctctctagggtatgtttttcaattgttttg 416  Q
    ||||||||||||||||||||||||||||||    
T  15382276 ctctctagggtatgtttttcaattgttttg 15382305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 33638257 - 33638322
Alignment:
Q  10 gtgagatgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    |||| ||||| ||||||| ||||||||||||| ||||| | || ||| ||||||||||||| ||||    
T  33638257 gtgatatgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtgaataaaa 33638322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 33638443 - 33638383
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||| ||||||| ||||||||||||| ||||| | || ||| ||||||||||||| ||||    
T  33638443 atgaagattgaagatcaatggttcttataaggtctttgaagataatacaaagtgaataaaa 33638383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 37569 - 37662
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc 475  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||  |||   |||||||||||  ||||||||    
T  37569 ttgttctctctagggtatgtttttcaattgttttgtaatgacgtcggttgccatgggcaactaaaattctcttattagggttccatgatgaacc 37662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 256 - 493
Target Start/End: Complemental strand, 11324 - 11084
Alignment:
Q  256 taatccttaagtaatcattcactataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagt 355  Q
    ||||||||||||||| ||  ||||||||||||||| |||||||||| ||| ||||||||| || ||| |  ||||||||||| ||| || | |||  ||     
T  11324 taatccttaagtaatgatgtactataaatagagacacttgcacacttttttattcattcaaaaagcttgtagtacaaggcaagggttaagcttca-gagc 11226  T
Q  356 ttcaaggcagagga--tccatctttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacc--tct 451  Q
    ||||||||||| ||  | |||| | ||  ||||||||||| ||||| |||||| |||||||||| || || |  ||||||||| ||||| |||||  | |    
T  11225 ttcaaggcagatgattttcatcctcctcatgttctctctaaggtatatttttctattgttttgtgataatttatgttgccatgtgcaactaaaccttttt 11126  T
Q  452 tcgattagggttcctcgatgaacctttcttatttgttggatt 493  Q
    |  ||||||||||| ||||||||| |||| ||||||| ||||    
T  11125 tttattagggttccacgatgaacccttctcatttgttagatt 11084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 11635 - 11569
Alignment:
Q  16 tgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    |||| ||||||  |||||| |||||| ||||||| || |||||||||||||||||||||| ||||||    
T  11635 tgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaagtgaagaaaattcattt 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 2552 - 2430
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||| ||||||||||||| ||||| ||| |||| | ||||| |  ||||||||||||||| ||||||||| |||||||||||| | ||||| || ||||    
T  2552 ttgttatctctagggtatgattttctattattttcttatgatatatgttgccatgagcaactaaacctctt-gattagggttccacaatgaaccccttct 2454  T
Q  481 tatttgttggattctattaataaa 504  Q
    ||||||||||| | ||||||||||    
T  2453 tatttgttggaatttattaataaa 2430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 2717 - 2595
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cctttct 480  Q
    ||||| ||||||||||||| ||||| ||| |||| | ||||| |  ||||||||||||||| ||||||||| |||||||||||| | ||||| || ||||    
T  2717 ttgttatctctagggtatgattttctattattttcttatgatatatgttgccatgagcaactaaacctctt-gattagggttccacaatgaaccccttct 2619  T
Q  481 tatttgttggattctattaataaa 504  Q
    ||||||||||| | ||||||||||    
T  2618 tatttgttggaatttattaataaa 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 277 - 505
Target Start/End: Complemental strand, 5369 - 5143
Alignment:
Q  277 ctataaatagagacccttgcacactctttgattcattcagaaggctagcggtacaaggcaaaggtcaatcatcacaagtttcaaggcagaggatccatct 376  Q
    |||||||||||||||||||||| |  | | ||||||| ||||  ||  |||| |||||||| |||||| ||||| | | |||||||||| |  | | ||     
T  5369 ctataaatagagacccttgcactcattattattcattaagaacactgacggttcaaggcaagggtcaagcatcaga-gcttcaaggcag-gatttcttca 5272  T
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc- 475  Q
    |||| |||||||||||||| |||||||||| |||||||||| |||||||  |||| |||||||||| |||| |||| |||||| ||| |  ||||||||     
T  5271 ttctcttgttctctctaggatatgtttttctattgttttgttatgatgtatgttgtcatgagcaactaaacttctt-gattagagtttcatgatgaacca 5173  T
Q  476 tttcttatttgttggattctattaataaag 505  Q
     |||| |||||||||||  ||| |||||||    
T  5172 cttctgatttgttggatattataaataaag 5143  T

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Target: scaffold0650; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 5707 - 5648
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||| |||||| |||||||||||||||||||| | |  ||| ||||||||||||||||||    
T  5707 atgaagattgaa-ttcaatggttcttagaaggtctttaaagaaaatacaaagtgaagaaaa 5648  T

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Target: scaffold0362 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 502
Target Start/End: Original strand, 8236 - 8361
Alignment:
Q  377 ttctattgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaa-cc 475  Q
    |||| |||||||||||||||||| |||||| |||||||  | |||||||  ||||| ||||||||| |||||||||  |||||||||||  |||||| ||    
T  8236 ttctcttgttctctctagggtatttttttctattgtttcattatgatgtttgttgctatgagcaactaaacctctt-aattagggttccaagatgaaccc 8334  T
Q  476 tttcttatttgttggattctattaata 502  Q
     ||||||||||||| | | ||||||||    
T  8335 cttcttatttgttgaaatttattaata 8361  T

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Target: scaffold0836 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 2824 - 2882
Alignment:
Q  55 gacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaac 113  Q
    ||||||||||||||||||||| |||||| ||  ||||||| ||||||||||||||||||    
T  2824 gacaatacaaagtgaagaaaattcatttaaagatccaaggtatcacaagacaaaagaac 2882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 505
Target Start/End: Complemental strand, 4717 - 4610
Alignment:
Q  398 atgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacc-tttcttatttgttggattcta 496  Q
    ||||||||| ||||||||||||||||||  ||| ||| || |||| |||||| || ||||| |||||   |||||||| |||||||||||||| ||| ||    
T  4717 atgtttttctattgttttgtaatgatgtttgttaccacgaacaactaaacctttttgatta-ggttctaagatgaaccatttcttatttgttgaatttta 4619  T
Q  497 ttaataaag 505  Q
    |||||||||    
T  4618 ttaataaag 4610  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 26893 - 26833
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaa 75  Q
    ||||| |||||||||||||||||||||||| ||   || ||||||||||||||||||||||    
T  26893 atgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaaagtgaagaaaa 26833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 21574 - 21641
Alignment:
Q  15 atgaatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    ||||| ||||||| ||||||||||||||||||| | |  |||||||||||||| ||||| | ||||||    
T  21574 atgaagattgaagatcaatggttcttagaaggtttttaaagacaatacaaagttaagaatattcattt 21641  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 58943 - 59037
Alignment:
Q  32 atggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggt 127  Q
    |||||||||| ||  ||| || ||||||| |||| ||||||||  |||||| || |||||||| |||||||||| |||||||  ||||||||||||    
T  58943 atggttcttaaaatatatttgaagacaatgcaaaatgaagaaat-tcatttaaagttccaaggtatcacaagacgaaagaacgcttgaaaaagggt 59037  T

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Target: scaffold1149 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 1978 - 2080
Alignment:
Q  30 caatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcatttgaatttccaaggcatcacaagacaaaagaactgttgaaaaagggttg 129  Q
    |||||||||||| | ||| | || |||||||||||||| ||||||| |||||| || ||||||  | |  ||||||| |||||| | ||||||||||| |    
T  1978 caatggttcttatatggtttttgaagacaatacaaagtaaagaaaattcatttcaagttccaatactttgcaagacagaagaacgggtgaaaaagggtcg 2077  T
Q  130 aaa 132  Q
    |||    
T  2078 aaa 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 505
Target Start/End: Complemental strand, 22146 - 22026
Alignment:
Q  385 ttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacctt-tcttat 483  Q
    ||||||| ||||||| | |||  |||||||||| ||||| |  |||||||||| |||| ||||||||| ||| | ||||||  ||||||||   ||||||    
T  22146 ttctctccagggtatatatttttattgttttgttatgatttatgttgccatgaacaactaaacctctt-gatcatggttccatgatgaaccccatcttat 22048  T
Q  484 ttgttggattctattaataaag 505  Q
    |||||||||  |||||||||||    
T  22047 ttgttggatattattaataaag 22026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 2679 - 2743
Alignment:
Q  18 aatattgaagttcaatggttcttagaaggtatatgtagacaatacaaagtgaagaaaaatcattt 82  Q
    |||| ||||| ||||||||||||| |||  || || |||||||||| ||||||||||| ||||||    
T  2679 aataatgaagatcaatggttcttataagacatttgaagacaatacagagtgaagaaaactcattt 2743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 501
Target Start/End: Complemental strand, 37107 - 36988
Alignment:
Q  382 ttgttctctctagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttct 480  Q
    ||||||||| ||||||||||| ||| |||||||| | | ||||   |||| |||||||||| ||| || || |||||||||||| | || | ||| ||||    
T  37107 ttgttctctatagggtatgttcttctattgttttcttacgatgcttgttggcatgagcaactaaa-ctttttgattagggttccacaataagcctgttct 37009  T
Q  481 tatttgttggattctattaat 501  Q
    ||||||||||| | |||||||    
T  37008 tatttgttggagtttattaat 36988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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