View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16600_high_36 (Length: 272)
Name: NF16600_high_36
Description: NF16600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16600_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 37604216 - 37604470
Alignment:
| Q |
1 |
atttaggatgtgacaataaaaatgtaatgatggtagagaatttgaatcccttaagaggcaattgagtctacgttagaatgggttgaggtattgctaaaat |
100 |
Q |
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| T |
37604216 |
atttacgatgtgacaatacaaatgtaatgatggtagagaatttgaatcccttaagaggcaattgagtctaccttagaatgggttgaggtattgctaaaat |
37604315 |
T |
|
| Q |
101 |
ggtccatggagacatataggctgtaactgatctgacttgaagggaaaacggctctgcattttcagaattattttcttgtggcaaatgtgtaaagaagctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604316 |
ggtccatggagacatataggctgtaactgatctgacttgaagggaaaacggctctgcattttcagaattattttcttgtggcaaatgtgtaaagaagctc |
37604415 |
T |
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| Q |
201 |
tacaaattgatggatcacatggaaggcaaaaaggaaaataaaatatgtacgttgt |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604416 |
tacaaattgatggatcacatggaaggcaaaaaggaaaataaaatatgtacgttgt |
37604470 |
T |
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