View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16600_low_49 (Length: 232)
Name: NF16600_low_49
Description: NF16600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16600_low_49 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 216
Target Start/End: Complemental strand, 7734245 - 7734050
Alignment:
| Q |
21 |
agtgtatgcactgttatcataaatgcaaatattgagtgatgtatatagtataaattagacggtatattagaaaaataggattaatattacattgaaaatt |
120 |
Q |
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| T |
7734245 |
agtgtatgcaccgttatcataaatgcaaatattgagtgatgtatatagtataaattagacggtatattagaaaaataggattaatattacattgaaaatt |
7734146 |
T |
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| Q |
121 |
gaaataacactcattttggatcaaatgttttgtttacaaatgtgacactaataatgggatggaaggagtactaccaaaattaaaaaggccttcata |
216 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
7734145 |
gaaataacactcgttttggatcaaatgttttgtttacaaatgtgacactaataatgggatggaaggagtactaccaaaattaaaaaggtcttcata |
7734050 |
T |
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