View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16601_high_8 (Length: 339)

Name: NF16601_high_8
Description: NF16601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16601_high_8
NF16601_high_8
[»] chr2 (27 HSPs)
chr2 (113-277)||(25539060-25539224)
chr2 (113-276)||(19491983-19492147)
chr2 (117-271)||(27406848-27407001)
chr2 (113-300)||(31023331-31023516)
chr2 (121-272)||(5395445-5395596)
chr2 (113-298)||(15627771-15627958)
chr2 (120-221)||(41002117-41002220)
chr2 (124-221)||(16766892-16766989)
chr2 (120-221)||(974429-974533)
chr2 (113-253)||(8428298-8428436)
chr2 (113-202)||(34841705-34841795)
chr2 (113-223)||(19245686-19245799)
chr2 (121-221)||(21869256-21869359)
chr2 (113-214)||(24473931-24474035)
chr2 (120-218)||(34577986-34578084)
chr2 (120-184)||(20034156-20034220)
chr2 (196-298)||(13502963-13503063)
chr2 (120-216)||(7301884-7301982)
chr2 (121-186)||(26251656-26251722)
chr2 (242-303)||(19245259-19245320)
chr2 (113-184)||(35565872-35565939)
chr2 (235-299)||(19257473-19257537)
chr2 (113-160)||(13502588-13502635)
chr2 (112-189)||(31578143-31578218)
chr2 (126-182)||(27524036-27524092)
chr2 (113-189)||(31237891-31237967)
chr2 (255-299)||(34577811-34577855)
[»] chr1 (16 HSPs)
chr1 (117-277)||(17055838-17055997)
chr1 (117-304)||(18891513-18891702)
chr1 (113-290)||(27917287-27917462)
chr1 (215-322)||(18337458-18337565)
chr1 (128-221)||(24117600-24117694)
chr1 (120-184)||(12002793-12002857)
chr1 (120-184)||(17197462-17197526)
chr1 (113-189)||(42179979-42180055)
chr1 (113-212)||(18337207-18337300)
chr1 (113-189)||(47785998-47786072)
chr1 (113-160)||(16434677-16434725)
chr1 (113-184)||(23528800-23528870)
chr1 (114-183)||(9954949-9955019)
chr1 (117-189)||(16446676-16446749)
chr1 (113-189)||(9351978-9352053)
chr1 (113-189)||(25146684-25146759)
[»] chr4 (30 HSPs)
chr4 (113-288)||(4156893-4157066)
chr4 (128-299)||(18459546-18459717)
chr4 (113-277)||(8011051-8011214)
chr4 (113-239)||(7044851-7044977)
chr4 (138-324)||(7825044-7825239)
chr4 (113-298)||(7452540-7452720)
chr4 (206-302)||(6346992-6347087)
chr4 (155-324)||(7815641-7815819)
chr4 (121-223)||(9149646-9149749)
chr4 (162-290)||(7803125-7803261)
chr4 (200-304)||(24719621-24719725)
chr4 (113-300)||(10394629-10394825)
chr4 (113-187)||(6346870-6346944)
chr4 (120-219)||(55476082-55476183)
chr4 (113-189)||(7045080-7045156)
chr4 (121-186)||(18403670-18403735)
chr4 (113-180)||(24719722-24719789)
chr4 (120-186)||(8409723-8409789)
chr4 (113-248)||(5943162-5943298)
chr4 (129-221)||(8743708-8743803)
chr4 (130-186)||(5846050-5846106)
chr4 (113-189)||(17466218-17466293)
chr4 (120-175)||(8020723-8020778)
chr4 (117-182)||(5884212-5884277)
chr4 (113-189)||(5375803-5375879)
chr4 (113-189)||(9911326-9911401)
chr4 (113-184)||(36120968-36121037)
chr4 (117-184)||(10143043-10143110)
chr4 (255-308)||(18327443-18327496)
chr4 (255-308)||(18437901-18437954)
[»] chr5 (21 HSPs)
chr5 (113-290)||(43005774-43005953)
chr5 (113-288)||(24648065-24648231)
chr5 (120-221)||(41427510-41427614)
chr5 (116-203)||(26021444-26021532)
chr5 (120-221)||(19377704-19377808)
chr5 (230-288)||(26021395-26021453)
chr5 (113-221)||(15446302-15446413)
chr5 (126-217)||(30804032-30804124)
chr5 (126-221)||(187812-187909)
chr5 (113-174)||(9996898-9996959)
chr5 (136-221)||(22984751-22984839)
chr5 (113-221)||(30799497-30799606)
chr5 (120-176)||(15052025-15052081)
chr5 (113-189)||(19579081-19579157)
chr5 (173-221)||(13349509-13349558)
chr5 (113-189)||(18843854-18843929)
chr5 (228-299)||(4289921-4289992)
chr5 (138-189)||(19979738-19979789)
chr5 (153-221)||(29270235-29270303)
chr5 (113-189)||(20321081-20321157)
chr5 (113-189)||(23172343-23172418)
[»] chr7 (19 HSPs)
chr7 (117-290)||(26565467-26565638)
chr7 (113-291)||(21157598-21157775)
chr7 (115-290)||(30294291-30294458)
chr7 (120-221)||(1981257-1981360)
chr7 (188-296)||(24915794-24915901)
chr7 (120-218)||(25842665-25842765)
chr7 (121-221)||(17809050-17809151)
chr7 (120-218)||(23618363-23618463)
chr7 (228-323)||(25842879-25842975)
chr7 (113-189)||(5058668-5058743)
chr7 (120-176)||(8254040-8254096)
chr7 (113-184)||(20570800-20570870)
chr7 (121-186)||(7307140-7307204)
chr7 (113-189)||(4247495-4247570)
chr7 (113-189)||(44944760-44944835)
chr7 (120-219)||(8629662-8629761)
chr7 (113-189)||(24725387-24725467)
chr7 (113-165)||(4574879-4574931)
chr7 (120-181)||(8304218-8304281)
[»] chr8 (18 HSPs)
chr8 (113-324)||(15761273-15761484)
chr8 (113-249)||(8582121-8582257)
chr8 (113-219)||(26575038-26575147)
chr8 (113-215)||(1018096-1018199)
chr8 (130-217)||(16752119-16752208)
chr8 (127-221)||(40541761-40541858)
chr8 (113-189)||(11879739-11879814)
chr8 (113-189)||(11897155-11897230)
chr8 (157-223)||(17566213-17566280)
chr8 (113-189)||(6810960-6811034)
chr8 (121-189)||(3094165-3094233)
chr8 (113-184)||(23142319-23142388)
chr8 (113-182)||(29384227-29384300)
chr8 (235-290)||(24056523-24056578)
chr8 (113-184)||(45403173-45403244)
chr8 (120-160)||(2040274-2040314)
chr8 (111-183)||(5922194-5922265)
chr8 (113-189)||(27836379-27836454)
[»] chr3 (35 HSPs)
chr3 (151-320)||(10872817-10872987)
chr3 (113-324)||(27676440-27676650)
chr3 (154-301)||(17796593-17796742)
chr3 (154-301)||(19105033-19105182)
chr3 (188-277)||(24649598-24649686)
chr3 (3-115)||(26129080-26129187)
chr3 (3-115)||(26179136-26179243)
chr3 (1-81)||(26205094-26205174)
chr3 (171-324)||(15806407-15806551)
chr3 (120-184)||(8592333-8592397)
chr3 (120-205)||(9169782-9169868)
chr3 (120-218)||(19348648-19348748)
chr3 (113-221)||(6861054-6861165)
chr3 (1-81)||(26110811-26110891)
chr3 (13-113)||(26127784-26127879)
chr3 (13-113)||(26177834-26177929)
chr3 (120-218)||(22970903-22971004)
chr3 (3-48)||(26139784-26139829)
chr3 (113-189)||(42696986-42697062)
chr3 (120-217)||(18014089-18014186)
chr3 (1-73)||(26233165-26233237)
chr3 (122-166)||(28135923-28135967)
chr3 (113-189)||(28745915-28745990)
chr3 (113-189)||(39428041-39428117)
chr3 (113-189)||(15515173-15515246)
chr3 (117-167)||(15806302-15806352)
chr3 (223-314)||(28135816-28135907)
chr3 (120-171)||(10591789-10591840)
chr3 (113-143)||(6136484-6136514)
chr3 (113-143)||(13286128-13286158)
chr3 (113-186)||(23649368-23649441)
chr3 (68-113)||(26201939-26201984)
chr3 (255-299)||(3041200-3041244)
chr3 (117-149)||(10872634-10872666)
chr3 (238-304)||(24263358-24263426)
[»] chr6 (18 HSPs)
chr6 (113-299)||(4841744-4841928)
chr6 (117-222)||(18490558-18490664)
chr6 (174-277)||(3573866-3573969)
chr6 (126-223)||(31407397-31407497)
chr6 (113-221)||(33593078-33593189)
chr6 (113-208)||(20400001-20400099)
chr6 (121-204)||(5422582-5422665)
chr6 (121-221)||(7621902-7622006)
chr6 (188-291)||(18490784-18490886)
chr6 (113-223)||(20432521-20432633)
chr6 (113-189)||(23897950-23898025)
chr6 (126-182)||(27890519-27890575)
chr6 (131-186)||(645415-645470)
chr6 (126-218)||(24209648-24209745)
chr6 (113-189)||(26053211-26053286)
chr6 (113-189)||(26073264-26073339)
chr6 (113-184)||(7918265-7918333)
chr6 (113-189)||(17250196-17250270)
[»] scaffold0603 (1 HSPs)
scaffold0603 (113-254)||(8874-9015)
[»] scaffold0048 (2 HSPs)
scaffold0048 (188-299)||(48688-48798)
scaffold0048 (210-299)||(61304-61392)
[»] scaffold0115 (1 HSPs)
scaffold0115 (113-222)||(34904-35014)
[»] scaffold1178 (1 HSPs)
scaffold1178 (120-221)||(426-530)
[»] scaffold0017 (1 HSPs)
scaffold0017 (130-217)||(38475-38565)
[»] scaffold0061 (1 HSPs)
scaffold0061 (130-181)||(76257-76308)
[»] scaffold0027 (1 HSPs)
scaffold0027 (120-218)||(133049-133149)
[»] scaffold0684 (1 HSPs)
scaffold0684 (120-221)||(5146-5249)
[»] scaffold0534 (1 HSPs)
scaffold0534 (157-223)||(785-852)
[»] scaffold0186 (1 HSPs)
scaffold0186 (113-189)||(8582-8655)
[»] scaffold0001 (1 HSPs)
scaffold0001 (136-221)||(142722-142810)
[»] scaffold0036 (1 HSPs)
scaffold0036 (166-211)||(37057-37103)
[»] scaffold0526 (1 HSPs)
scaffold0526 (120-184)||(8288-8351)
[»] scaffold0259 (1 HSPs)
scaffold0259 (250-290)||(18165-18205)


Alignment Details
Target: chr2 (Bit Score: 114; Significance: 9e-58; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 113 - 277
Target Start/End: Original strand, 25539060 - 25539224
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatac 211  Q
    ||||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||     
T  25539060 aatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatagtcataaatgactcagtttaaagtccacaaaatacttataa 25539159  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 277  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  25539160 ataaatgactaa-aaaaatggacaaaattctacaaaaccctttaaaatcctgcgattttgtatgaa 25539224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 113 - 276
Target Start/End: Complemental strand, 19492147 - 19491983
Alignment:
Q  113 aatcgatggattttaccaaaacaaa-aataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttata 210  Q
    ||||||||||||||||||||| ||| ||||||| |||| |||||||||| ||||||||||||||||||| |||| ||| ||||| |||| ||||||||||    
T  19492147 aatcgatggattttaccaaaaaaaataataatgctaaatatatgttataaattgtatatagtcataaataactctgtttaaagtccacagaatacttata 19492048  T
Q  211 cataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatga 276  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  19492047 cataaatgactaacaa-aatggataaaattcttcaaaaccctttaaaatcctgcgattttgtatga 19491983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 117 - 271
Target Start/End: Complemental strand, 27407001 - 27406848
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatacataa 215  Q
    ||||||||| |||||||||||||||||| |||| |||| ||||| | |||||||||| ||||||||||||| ||||||| |||||||||| |||||||||    
T  27407001 gatggatttcaccaaaacaaaaataatgctaaatatatattataaactgtatatagtaataaatgactcagtttaaagtccacaaaatacatatacataa 27406902  T
Q  216 atgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttg 271  Q
    |||||| |||| || |||||||||||||||||||||||||||||| ||||||||||    
T  27406901 atgact-acaataa-ggacaaaattcttcaaaaccctttaaaatcatgcgattttg 27406848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 300
Target Start/End: Complemental strand, 31023516 - 31023331
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaatacttataca 212  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||| || ||| |||||||||||  | | |||| |||| ||| |||||||||||||    
T  31023516 aatcgatggattttaccaaaataaaaataatgttaaatatatgttataaatagtaaatagtcataaactaattagtttaagtccaccaaatacttataca 31023417  T
Q  213 taaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttta 300  Q
     |||||||||  || ||| |||||||||||||||| || ||||||||| | |||||||||||  |||||| |||||||| ||||||||    
T  31023416 aaaatgacta--aaaaattgacaaaattcttcaaacccttttaaaatcctacgattttgtatagatttcaagattttgtgcgatttta 31023331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 272
Target Start/End: Original strand, 5395445 - 5395596
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactc-agttaaagttcacaaaatac-ttatacataaatg 218  Q
    |||||||||||||||||||||||| | || |||||||||| |||||||||||||||||||||| | | ||||||| ||| |||||| |||||||||||||    
T  5395445 gattttaccaaaacaaaaataatgttcaaaatatgttataaattgtatatagtcataaatgacccaatttaaagtccaccaaatactttatacataaatg 5395544  T
Q  219 actaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgt 272  Q
    ||||  || ||||||||||||  || || ||||||||||||| ||| |||||||    
T  5395545 acta--aaaaatggacaaaatcatttaagaccctttaaaatcctgcaattttgt 5395596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 113 - 298
Target Start/End: Complemental strand, 15627958 - 15627771
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatac 211  Q
    ||||||||||||||| ||| | ||||| || | |||  ||||||| || ||| ||||| ||| ||||||||| |||| ||||| | |||||||||||||     
T  15627958 aatcgatggattttatcaacaaaaaaaaaaggttaagtatatgttttaaattatatattgtcgtaaatgacttagtttaaagtgcgcaaaatacttatat 15627859  T
Q  212 ataaatgactaacaacaa-tggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattt 298  Q
    |||||||||||| || || |||||||||| |||  ||||||||||||||| || |||||||||||||||||||  |||||| ||||||    
T  15627858 ataaatgactaaaaaaaaatggacaaaatcctttgaaaccctttaaaatcctgtgattttgtatgaatttcacagttttgtgcgattt 15627771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 41002220 - 41002117
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||  |||| ||||| |||||||||| |||||||||||    
T  41002220 ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagtccacaaaatacatatacataaat 41002121  T
Q  218 gact 221  Q
    ||||    
T  41002120 gact 41002117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 16766989 - 16766892
Alignment:
Q  124 tttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatacataaatgact 221  Q
    ||||||||||||||||||||| |||| || ||||||| |||||||| ||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  16766989 tttaccaaaacaaaaataatgctaaatatttgttataaattgtatacagtcataaatgactcagtttaaagtccacaaaaaactta-acataaatgact 16766892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 974533 - 974429
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagtt-aaagttcacaaaatacttatacataaa 216  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||   |||| ||||| |||||||||| ||||||||||    
T  974533 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgacttaaagttcaaagtccacaaaatacatatacataaa 974434  T
Q  217 tgact 221  Q
    |||||    
T  974433 tgact 974429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 8428436 - 8428298
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaatacttataca 212  Q
    |||||||| ||| ||||||||||||||||||| |||  |||| ||||| ||| ||||||||||||||| |||| ||  |||| ||||||||| |||||||    
T  8428436 aatcgatgaattataccaaaacaaaaataatgctaactatatattataaattatatatagtcataaattactcggt--aagtccacaaaatatttataca 8428339  T
Q  213 taaatgactaacaacaatggacaaaattcttcaaaaccctt 253  Q
    ||||||||||| || | ||||| ||||  ||||||| ||||    
T  8428338 taaatgactaaaaaaagtggactaaatctttcaaaatcctt 8428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 34841795 - 34841705
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaa 202  Q
    |||||||||||| || | ||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||| ||||||| |||||||    
T  34841795 aatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagtttaaagtccacaaaa 34841705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 19245799 - 19245686
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatacttat 209  Q
    |||||||||||| |||||||| |||||||||| |||| ||||| || | |||| || |||||||||||||||||    ||||||| |||||||||||| |    
T  19245799 aatcgatggattctaccaaaataaaaataatgttaaatatatgatagaaattgcatgtagtcataaatgactcaaagtttaaagtccacaaaatactttt 19245700  T
Q  210 acataaatgactaa 223  Q
     |||||||||||||    
T  19245699 gcataaatgactaa 19245686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 21869256 - 21869359
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagtt-aaagttcacaaaatacttatacataaat 217  Q
    |||| ||||||||||||||| ||| |||| |||||||||| |||| |||||||||||||| |||   |||| ||||| |||||||||| |||||||||||    
T  21869256 gattctaccaaaacaaaaattatgctaaatatatgttataaattgcatatagtcataaataacttaaagttcaaagtccacaaaatacatatacataaat 21869355  T
Q  218 gact 221  Q
    ||||    
T  21869356 gact 21869359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 24474035 - 24473931
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagttaaagtt-cacaaaatacttat 209  Q
    ||||| |||||| ||||||||||||| |||||||||| | ||| |||| |||| ||||||| ||||||||||   ||||||| || ||||||||||||||    
T  24474035 aatcgttggattctaccaaaacaaaattaatgataaatagatgatataaattgcatatagttataaatgactaaaagttaaaattccacaaaatacttat 24473936  T
Q  210 acata 214  Q
    |||||    
T  24473935 acata 24473931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 34578084 - 34577986
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| ||||||||||||||||||| |||| |||||||||| ||||   ||||||||||||||||  |||| ||||| |||||||||| |||||||||||    
T  34578084 ggattctaccaaaacaaaaataatgttaaatatatgttataaattg--catagtcataaatgactaaagttcaaagtccacaaaatacatatacataaat 34577987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 20034156 - 20034220
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||| ||||||||||||    
T  20034156 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatactcataaatgact 20034220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 298
Target Start/End: Original strand, 13502963 - 13503063
Alignment:
Q  196 cacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacga 295  Q
    |||||||||||||||||||||||||  | || |||| || |||| || ||||||| ||||||||| || ||||||| ||| ||||||||| ||||| |||    
T  13502963 cacaaaatacttatacataaatgac--aaaaaaatgaactaaatcctccaaaaccttttaaaatcctgtgattttgcatggatttcacgagtttgtgcga 13503060  T
Q  296 ttt 298  Q
    |||    
T  13503061 ttt 13503063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 7301982 - 7301884
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaa 216  Q
    ||||| |||||||| |||||||||| |||| |||||||||| |||| |||| |||||||||||||  |||| ||||| |||||||||| ||| ||||||    
T  7301982 ggattctaccaaaataaaaataatgttaaatatatgttataaattgcatatggtcataaatgactaaagttcaaagtccacaaaatacatatgcataaa 7301884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 26251722 - 26251656
Alignment:
Q  121 gattttaccaaaa-caaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    |||| |||||||| ||||||||||| |||| |||||||||| |||| ||||||||||||||||||||    
T  26251722 gattctaccaaaatcaaaaataatggtaaatatatgttataaattgcatatagtcataaatgactca 26251656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 19245320 - 19245259
Alignment:
Q  242 ttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattttacta 303  Q
    ||||||| ||||||||||||||||| |||| ||| ||||||||||||||| | |||||||||    
T  19245320 ttcaaaatcctttaaaatcttgcgactttgcatggatttcacgattttgtgcaattttacta 19245259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 35565872 - 35565939
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||||||||||||||||||| ||||||| |   ||| |||||||||| |||||||||||||||||||||||    
T  35565872 aatcgatggattttaccaaaa-aaaaatact---aaatatatgttataaattgtatatagtcataaatgact 35565939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 19257473 - 19257537
Alignment:
Q  235 aaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    ||||||||||||||  |||||||||| |||||||||| ||| ||||||| ||||||| |||||||    
T  19257473 aaaattcttcaaaattctttaaaatcctgcgattttgaatggatttcacaattttgtgcgatttt 19257537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 13502588 - 13502635
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttata 160  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||    
T  13502588 aatcgatggattttaccaaaacaaaaataatattaaatatatgttata 13502635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 31578218 - 31578143
Alignment:
Q  112 taatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||||||||||| | |||  ||||||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  31578218 taatcgatggattttaaccaaa--aaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 31578143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 27524036 - 27524092
Alignment:
Q  126 taccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatga 182  Q
    ||||||||||||||||||| |||| |||| ||||| |||| ||||| ||||||||||    
T  27524036 taccaaaacaaaaataatgttaaatatatattataaattgcatatattcataaatga 27524092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 31237891 - 31237967
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatg-ataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| || ||||||  || || |||||||||| || ||||||| |||||||||||| ||||    
T  31237891 aatcgatggattttaccaaaa-aataataatacatgaatatatgttataaatggtatataatcataaatgacttagtt 31237967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 34577855 - 34577811
Alignment:
Q  255 aaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||    
T  34577855 aaaatcctgcgattttgaatgaattccacgattttgtgcgatttt 34577811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 117 - 277
Target Start/End: Original strand, 17055838 - 17055997
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataa 215  Q
    |||||||||||||||||||||||||||| ||||  |||| |||| ||| |||||||||||| |||||||| || ||||| ||||||||||||||||||||    
T  17055838 gatggattttaccaaaacaaaaataatgctaaa--tatgctataaattatatatagtcatatatgactcaatttaaagtccacaaaatacttatacataa 17055935  T
Q  216 atgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 277  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17055936 atgactaacaaaaatcgacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 17055997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 117 - 304
Target Start/End: Original strand, 18891513 - 18891702
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttc-acaaaatacttatacataa 215  Q
    |||| ||||||||||||| ||||||||| |||| |||| ||||| ||| || |||||||||||||| |||||| || ||| |||||||||||||||||||    
T  18891513 gatgaattttaccaaaacgaaaataatgttaaatatatattataaattatagatagtcataaatgattcagtttaaattccacaaaatacttatacataa 18891612  T
Q  216 atgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttactag 304  Q
    ||| |||| || ||||||||| |  |||||||||||||||||||| ||| |||| |||||||||||||||||||| | ||||||||||||    
T  18891613 atggctaaaaaaaatggacaatagacttcaaaaccctttaaaatcgtgcaatttcgtatgaatttcacgattttgatgcgattttactag 18891702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 27917287 - 27917462
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaatacttataca 212  Q
    |||||||| |||||||  ||||| ||||||||  ||| |||| ||||| || |||||||||||||||| |||||||| ||  ||||||||||||||||||    
T  27917287 aatcgatgaattttac--aaacataaataatgcaaaatatatattataaatcgtatatagtcataaataactcagtttaaagtcacaaaatacttataca 27917384  T
Q  213 taaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg 290  Q
    |||||||||||  | |||| | || || || ||||||||||||||||| | | |||||||||||||||||| ||||||    
T  27917385 taaatgactaaacaaaatgtaaaacatcctccaaaaccctttaaaatcctccaattttgtatgaatttcacaattttg 27917462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 18337458 - 18337565
Alignment:
Q  215 aatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttactagtattctgcc 313  Q
    ||||||||| || |||||||||||||| |||| ||||||||||||| | |||||||||||| |||||||||||||| | |||||||||||| ||| ||||    
T  18337458 aatgactaaaaa-aatggacaaaattcatcaagaccctttaaaatcctacgattttgtatggatttcacgattttgatgcgattttactaggattttgcc 18337556  T
Q  314 ttttttggg 322  Q
    | |||||||    
T  18337557 tattttggg 18337565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 24117694 - 24117600
Alignment:
Q  128 ccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag---ttaaagttcacaaaatacttatacataaatgact 221  Q
    ||||||||||||||||| ||||  |||||| || |||| ||||||||||||||||||||    |||||||||||||||||| |||||||||||||||    
T  24117694 ccaaaacaaaaataatgctaaa--tatgttttaaattgcatatagtcataaatgactcaaaatttaaagttcacaaaatacatatacataaatgact 24117600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 12002793 - 12002857
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||    
T  12002793 ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgact 12002857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 17197462 - 17197526
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||| ||||||||||||||||||| |||| |||||||| | |||| ||||||||||||||||||    
T  17197462 ggattctaccaaaacaaaaataatgttaaatatatgttacaaattgcatatagtcataaatgact 17197526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 42179979 - 42180055
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| ||| |||||  || | |||||||||| || |||||||||||||||||||| ||||    
T  42179979 aatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatatagtcataaatgacttagtt 42180055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 18337207 - 18337300
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca--gttaaagttcacaaaatacttata 210  Q
    |||||||||||||||||||||||||||| |||||        |||||| |||||||||||||||||||||||||   ||||| | ||||||||||| |||    
T  18337207 aatcgatggattttaccaaaacaaaaatgatgat--------gttataaattgtatatagtcataaatgactcaagtttaaaatccacaaaatactcata 18337298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 47786072 - 47785998
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||||||||||||| ||  ||||||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  47786072 aatcgatggattttaccacaa--aaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 47785998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 16434725 - 16434677
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaa-taatgataaacatatgttata 160  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  16434725 aatcgatggattctaccaaaacaaaaattaatgataaatatatgttata 16434677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 23528870 - 23528800
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||||||||||||||| ||  || |||||| ||||| ||| |||||| || ||||||||||||||||||||    
T  23528870 aatcgatggattttacccaat-aataataataataaatatacgttataaatggtatatagtcataaatgact 23528800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 9954949 - 9955019
Alignment:
Q  114 atcgatggattttac-caaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgac 183  Q
    ||||||||||||||| ||||| || ||||||  | || |||||||||| || |||||||||||||||||||    
T  9954949 atcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaatgac 9955019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 16446676 - 16446749
Alignment:
Q  117 gatggattttaccaaaacaaaa-ataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||| ||| ||||||||| |||||  |||| |||||||||| |||| ||||| ||||| |||||||||||    
T  16446676 gatggattctacaaaaacaaaatataatactaaatatatgttataaattgcatataatcatatatgactcagtt 16446749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 9351978 - 9352053
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||| |||||||| ||| |||| ||||  |||| |||||||||| || ||||||||||| |||||||| ||||    
T  9351978 aatcgatgaattttacccaaa-aaaattaatactaaatatatgttataaatggtatatagtcaaaaatgacttagtt 9352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 25146684 - 25146759
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| |||| | ||  |||| ||| |||||| ||||||||||||||||||| ||| ||||    
T  25146684 aatcgatggattttacccaaa-aaaattgatactaaatatacgttataaattgtatatagtcataaataacttagtt 25146759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 113 - 288
Target Start/End: Complemental strand, 4157066 - 4156893
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatac 211  Q
    |||||||||||||||| ||||||||||||||| | || |||||||||| |||||||||||| |||||||| || ||| ||||||||||||||||||||||    
T  4157066 aatcgatggattttactaaaacaaaaataatgttgaatatatgttata-attgtatatagtgataaatgattcggtttaaagttcacaaaatacttatac 4156968  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattt 288  Q
    |||||||| ||| ||  ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  4156967 ataaatgaataaaaa--atggacaaaatccttcaaaatcctttaaaatcttgcgattttgtatgtatttcacaattt 4156893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 128 - 299
Target Start/End: Original strand, 18459546 - 18459717
Alignment:
Q  128 ccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaa 226  Q
    ||||||||||| ||| | |||| |||||||||  | |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| || |||    
T  18459546 ccaaaacaaaagtaacgctaaatatatgttatgaactgtatatagtcataaatgactcggtttaaagtccacaaaatacttatacataaatgatta-caa 18459644  T
Q  227 caatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
     |||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  18459645 aaatggacaaaatccttcaaaaccgtttaaaatcctgcaattttgtatgaatttcacgattttgtgcgatttt 18459717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 277
Target Start/End: Original strand, 8011051 - 8011214
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatac 211  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||| |||||||||| | |||||||| | || ||||||| ||||||||||||||||    
T  8011051 aatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatgaattagtttaaagtccacaaaatacttatac 8011150  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 277  Q
    |||||||| ||  || ||  ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  8011151 ataaatgaata--aagaaatgacaaaattcttcaaaaccctttaaaatcctgcgattttgtttgaa 8011214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 239
Target Start/End: Complemental strand, 7044977 - 7044851
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatac 211  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||| ||||||||||||| |||||||  |||| ||||||||||    
T  7044977 aatcgatggattttaccaaaacaaaaataatgttaaacatgtgttataatttgtatatagtgataaatgactcagtttaaagtcgacaagatacttatac 7044878  T
Q  212 ataaatgactaacaacaatggacaaaat 239  Q
    |||||||||||| || ||||||||||||    
T  7044877 ataaatgactaa-aaaaatggacaaaat 7044851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 324
Target Start/End: Complemental strand, 7825239 - 7825044
Alignment:
Q  138 aataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaacaatggacaa 236  Q
    ||||||| |||| | | |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    |||||||||    
T  7825239 aataatgctaaatacaagttataaattgtatatagtcataaatgactcagtttaaagtccacaaaatacttatacataaatgactaaattaaatggacaa 7825140  T
Q  237 aa---ttc----ttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttactagtattctgccttttttgggat 324  Q
    ||   |||    ||||||||||||||||||||||| |||||||||| |||||| ||||||| | | | |||||||| ||| ||||| |||||||||    
T  7825139 aatcgttcaaaattcaaaaccctttaaaatcttgcaattttgtatggatttcaagattttgatgcaactttactaggattttgcctattttgggat 7825044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 298
Target Start/End: Complemental strand, 7452720 - 7452540
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttc-acaaaatacttatac 211  Q
    ||||||||||||||  |||||||||||||||| | || |||||||||| ||| |||||||    ||||||||||||| || ||| |||||| ||||||||    
T  7452720 aatcgatggattttgtcaaaacaaaaataatgcttaatatatgttataaattctatatag----aaatgactcagtttaaattccacaaaacacttatac 7452625  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattt 298  Q
    | ||||||| || || | |||||||  | |||||||||||||||||||| ||| |||||||||| ||||||||||||||| ||||||    
T  7452624 aaaaatgaccaaaaaaattggacaa--tccttcaaaaccctttaaaatcctgcaattttgtatgtatttcacgattttgtgcgattt 7452540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 6346992 - 6347087
Alignment:
Q  206 ttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattttact 302  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  6346992 ttatacataaatgactaaaaa-aatggacaaaatccttcaaaaccctttaaaatcctgcgattttgtgtgaatttcacgattttgtgcgattttact 6347087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 324
Target Start/End: Complemental strand, 7815819 - 7815641
Alignment:
Q  155 gttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatacataaatgactaacaacaatggacaaaa---ttc----ttcaa 246  Q
    |||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||    |||||||||||   |||    |||||    
T  7815819 gttataaattgtatatagtcataaatgactcagtttaaagtccacataatacttatacataaatgactaaattaaatggacaaaatcgttcaaaattcaa 7815720  T
Q  247 aaccctttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttactagtattctgccttttttgggat 324  Q
    |||||||||||||||||| |||||||||| |||||| ||||||| | | | |||||||| ||| ||||| |||||||||    
T  7815719 aaccctttaaaatcttgcaattttgtatggatttcaagattttgatgcaactttactaggattttgcctattttgggat 7815641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 9149646 - 9149749
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatacataaatga 219  Q
    ||||||||||||| |||||||||| |||| |||||||||| |||||||||||| ||||||||||||| ||||||| || |||||||||||||||||||||    
T  9149646 gattttaccaaaagaaaaataatgctaaatatatgttataaattgtatatagttataaatgactcagcttaaagtccaaaaaatacttatacataaatga 9149745  T
Q  220 ctaa 223  Q
    ||||    
T  9149746 ctaa 9149749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 162 - 290
Target Start/End: Complemental strand, 7803261 - 7803125
Alignment:
Q  162 attgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaacaatggacaaaa---ttc----ttcaaaaccctt 253  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    |||||||||||   |||    ||||||||||||    
T  7803261 attgtatatagtcataaatgactcagtttaaagtccacaaaatacttatacataaatgactaaattaaatggacaaaatcgttcaaaattcaaaaccctt 7803162  T
Q  254 taaaatcttgcgattttgtatgaatttcacgattttg 290  Q
    ||||||||||| |||||||||| |||||| |||||||    
T  7803161 taaaatcttgcaattttgtatggatttcaagattttg 7803125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 304
Target Start/End: Complemental strand, 24719725 - 24719621
Alignment:
Q  200 aaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    |||||||||||||||||||||||| || |||||||| ||||||| ||| ||| |||||||| |||||||||||||| |||||||| ||| || |||||||    
T  24719725 aaatacttatacataaatgactaaaaaaaatggacacaattcttaaaagcccattaaaatcctgcgattttgtatgtatttcacgttttcgtgcgatttt 24719626  T
Q  300 actag 304  Q
    |||||    
T  24719625 actag 24719621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 300
Target Start/End: Complemental strand, 10394825 - 10394629
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtc--------ataaatgactcagtt-aaagttcacaaaat 203  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||   |        ||||||||||| ||| ||| ||||||||||    
T  10394825 aatcgatggatattaccaaaacaaaaataatggtaaatatatgttataaattgtatattacctcccaaaaataaatgactccgtttaaaattcacaaaat 10394726  T
Q  204 acttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttta 300  Q
     ||||||||||||||| ||| || |  |||  |||| ||||||||| |||||||||| |||||||||| ||| |||| | |||||||| ||||||||    
T  10394725 tcttatacataaatgattaataaaagaggaagaaatccttcaaaactctttaaaatcctgcgattttgaatggatttaatgattttgtgcgatttta 10394629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 6346870 - 6346944
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  6346870 aatcgatggatttcaccaaaacaaaaataatgataaatatatgttataaattgtatatatgcataaatgactcag 6346944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 55476183 - 55476082
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| |||||||||||||||||||  ||| |||||||||| |||| ||||||||||||||||||  |||| ||||| |||||||||| |||||||||||    
T  55476183 ggattctaccaaaacaaaaataatgcaaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagtacacaaaatacatatacataaat 55476084  T
Q  218 ga 219  Q
    ||    
T  55476083 ga 55476082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 7045156 - 7045080
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||| |||||| |||||||||||||||||||| |||| ||||||||||  ||||||||||| |||||||||||||||    
T  7045156 aatctatggatcttaccaaaacaaaaataatgttaaatatatgttataatttgtatatagtgataaatgactcagtt 7045080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 18403735 - 18403670
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||    
T  18403735 gattctaccaaaacaaaaataatgttaaatatatgttataaattgtatatagtcatgaatgactca 18403670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 24719789 - 24719722
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaat 180  Q
    ||||||||  |||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||    
T  24719789 aatcgatgagttttaccaaagcaaaaataatgttaaatatatgttataaattgtatatagtcataaat 24719722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 8409789 - 8409723
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||  ||||||||||||||||||||    
T  8409789 ggattctaccaaaacaaaaataatgctaaatatatgttataaattacatatagtcataaatgactca 8409723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 5943162 - 5943298
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacat-atgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatact--ta 208  Q
    ||||||||||||||||||||| |||||||||| |||| || |||||||| ||  | ||||||||||||||||  || ||||||| |||||||||||  ||    
T  5943162 aatcgatggattttaccaaaataaaaataatgttaaatataatgttataaat--tttatagtcataaatgacaaagtttaaagtgcacaaaatacttata 5943259  T
Q  209 tacataaatgactaacaacaatggacaaaattcttcaaaa 248  Q
    ||||||||||| ||| || ||  |||||||||||| ||||    
T  5943260 tacataaatgagtaa-aaaaactgacaaaattctttaaaa 5943298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 8743708 - 8743803
Alignment:
Q  129 caaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatacttatacataaatgact 221  Q
    |||||||||||||||| |||| ||||||| || |||||  ||||||||||||||||||    |||||||  ||||||||||| |||||||||||||    
T  8743708 caaaacaaaaataatgttaaatatatgttttaaattgttcatagtcataaatgactcaaagtttaaagtctacaaaatacttgtacataaatgact 8743803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 5846050 - 5846106
Alignment:
Q  130 aaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    ||||||||||||||| |||| |||||||||| ||||||||| |||||||||||||||    
T  5846050 aaaacaaaaataatgctaaatatatgttataaattgtatattgtcataaatgactca 5846106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 17466293 - 17466218
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||||||||||| | || |||||||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  17466293 aatcgatggattttacaacaa-aaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtt 17466218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 8020723 - 8020778
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtca 175  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| |||||||||    
T  8020723 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtca 8020778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 5884212 - 5884277
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatga 182  Q
    |||||||||||| ||||||||| ||||| ||||  ||||||||| |||| |||| |||||||||||    
T  5884212 gatggattttacaaaaacaaaagtaatgctaaaagtatgttataaattgcatattgtcataaatga 5884277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 5375879 - 5375803
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| |||| ||||  |||| |||||||||| ||  ||||| ||||||||||||| ||||    
T  5375879 aatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatatggtcataaatgacttagtt 5375803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 9911326 - 9911401
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||||| |||||||||| || ||||||  | || |||||||||| || |||||||||||||||||||| ||||    
T  9911326 aatcgatggactttaccaaaa-aataataatacttaatatatgttataaatggtatatagtcataaatgacttagtt 9911401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 36121037 - 36120968
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    |||||||||||||||||||||  | ||||||  |||| |||| ||||| || ||||||||||||||||||||    
T  36121037 aatcgatggattttaccaaaa--ataataatactaaatatattttataaatggtatatagtcataaatgact 36120968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 10143110 - 10143043
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||||||||| ||||| |||||||||  |||| |||| |||||  | ||||||||||||||||||||    
T  10143110 gatggattttatcaaaaaaaaaataatactaaatatatattataattggtatatagtcataaatgact 10143043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 18327496 - 18327443
Alignment:
Q  255 aaaatcttgcgattttgtatgaatttcacgattttgtacgattttactagtatt 308  Q
    ||||||||||||||||| | |||||||| |||||||| |||||||  |||||||    
T  18327496 aaaatcttgcgattttgaacgaatttcaagattttgtgcgattttgatagtatt 18327443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 18437901 - 18437954
Alignment:
Q  255 aaaatcttgcgattttgtatgaatttcacgattttgtacgattttactagtatt 308  Q
    ||||||||||||||||| | |||||||| |||||||| |||||||  |||||||    
T  18437901 aaaatcttgcgattttgaacgaatttcaagattttgtgcgattttgatagtatt 18437954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 43005774 - 43005953
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaa-tacttata 210  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||| |||||||| | |||||||| |||||| ||||| ||||||||| |||||| |    
T  43005774 aatcgatggattgtaccaaaacaaaaataatgctaaatatatgttataaattgtatacactcataaatcactcagattaaatttcacaaaaatacttaaa 43005873  T
Q  211 cataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg 290  Q
     |||||||||||| || |||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  43005874 tataaatgactaaaaaaaatgaacaaaatccttcaaaacccttaaaaatcctgcgattttgtatgaatttcatgattttg 43005953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 113 - 288
Target Start/End: Complemental strand, 24648231 - 24648065
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactc-agttaaagttcacaaaatacttatac 211  Q
    ||||| |||||||||| |||||| |||||||| |||| |||| ||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  24648231 aatcggtggattttactaaaacataaataatgctaaatatatattataaattgtatatagtcataaatgactcaatttaaagtccacaaaatacttatac 24648132  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattt 288  Q
    |||||||||||| |  ||||||||||||          |||| ||||||||||||||||||||| ||||||||||||    
T  24648131 ataaatgactaaaataaatggacaaaat----------ccttcaaaatcttgcgattttgtatggatttcacgattt 24648065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 41427614 - 41427510
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagtt-aaagttcacaaaatacttatacataaa 216  Q
    ||||| |||||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||   |||| ||||| |||||||||| ||||||||||    
T  41427614 ggattctaccaaaacaaaaataatgataaatatatattataaattgcatatagtcataaatgacttaaagttcaaagtccacaaaatacatatacataaa 41427515  T
Q  217 tgact 221  Q
    |||||    
T  41427514 tgact 41427510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 26021532 - 26021444
Alignment:
Q  116 cgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaat 203  Q
    ||||| ||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||||||| |||||||  |||||||    
T  26021532 cgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatatagtcataaatgactcagattaaagtggacaaaat 26021444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 19377808 - 19377704
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagtt-aaagttcacaaaatacttatacataaa 216  Q
    ||||| ||| ||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||   |||| ||||| |||||||||| ||||||||||    
T  19377808 ggattctacaaaaacaaaaataatgttaaatatatgttataaattggatatagtcataaatgacttaaagttcaaagtccacaaaatacatatacataaa 19377709  T
Q  217 tgact 221  Q
    |||||    
T  19377708 tgact 19377704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 26021453 - 26021395
Alignment:
Q  230 tggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattt 288  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||    
T  26021453 tggacaaaatccttcaaaaccctttaaaatcctgcgattttgtatggatgtcacgattt 26021395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 15446413 - 15446302
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatacttat 209  Q
    |||||||||||| || |||||||||||||| |||||| |||||||||  |||| | | | ||||||||||||||    ||||||| |||||| ||||| |    
T  15446413 aatcgatggattctatcaaaacaaaaataacgataaatatatgttatcaattgcacacactcataaatgactcaaagtttaaagtccacaaattacttgt 15446314  T
Q  210 acataaatgact 221  Q
    ||||||||||||    
T  15446313 acataaatgact 15446302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 30804124 - 30804032
Alignment:
Q  126 taccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttc-acaaaatacttatacataaat 217  Q
    ||||||||||||||||||| |||| || | ||||  |||  |||||||||||||||||||||||  | ||| |||||||||||||||||||||    
T  30804124 taccaaaacaaaaataatgctaaatatttattatgaattacatatagtcataaatgactcagtttcaattctacaaaatacttatacataaat 30804032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 187812 - 187909
Alignment:
Q  126 taccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaatgact 221  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||||| |||||| |||  ||||  |||| |||||||||  |||||||||||||||    
T  187812 taccaaaacaaaaataatgttaaatatatgttataaattgcatatagtaataaataactaaagttcgaagtccacaaaatatatatacataaatgact 187909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 9996898 - 9996959
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtc 174  Q
    |||||||||||||||||||||||||||||||| | || |||||||||| ||||  |||||||    
T  9996898 aatcgatggattttaccaaaacaaaaataatgcttaatatatgttataaattgcttatagtc 9996959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 22984751 - 22984839
Alignment:
Q  136 aaaataatgataaacatatgttatatattgtatatagtcataaatgactc--agtt-aaagttcacaaaatacttatacataaatgact 221  Q
    ||||||||| |||| |||||||||| |||| ||||||||||| |||||||  |||| ||| | |||||||||| |||||||||||||||    
T  22984751 aaaataatgctaaatatatgttataaattgcatatagtcatagatgactcaaagttcaaattccacaaaatacatatacataaatgact 22984839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 30799606 - 30799497
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtta-aagttcacaaaatacttatac 211  Q
    |||||||||||| ||| |||   |||| |||| |||| || ||||||| ||| | ||| ||||||||||||| ||||  ||||||| |||||||||||||    
T  30799606 aatcgatggattgtacaaaattcaaaacaatgctaaatatttgttataaattatgtatggtcataaatgacttagtttcaagttcataaaatacttatac 30799507  T
Q  212 ataaatgact 221  Q
    ||||||||||    
T  30799506 ataaatgact 30799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 15052025 - 15052081
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcat 176  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||    
T  15052025 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcat 15052081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 19579157 - 19579081
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| |||||||||   ||| |||||||||  || ||| |||||||||||||||| ||||    
T  19579157 aatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcataaatgacttagtt 19579081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 13349509 - 13349558
Alignment:
Q  173 tcataaatgactcagtta-aagttcacaaaatacttatacataaatgact 221  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  13349509 tcataaatgactcagtttgaagtccacaaaatacttatacataaatgact 13349558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 18843929 - 18843854
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| |||| ||||  |||| |||||||||| || ||||||| |||||||||||| ||||    
T  18843929 aatcgatggattttacccaaa-aaaattaatactaaatatatgttataaatggtatataatcataaatgacttagtt 18843854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 4289992 - 4289921
Alignment:
Q  228 aatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    |||| ||||||| |||||||| || | |||||| |||||||||| | | ||||||||||||||| |||||||    
T  4289992 aatgaacaaaatccttcaaaatccatcaaaatcctgcgattttgaacggatttcacgattttgtgcgatttt 4289921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 19979789 - 19979738
Alignment:
Q  138 aataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||| ||||| |||||||||| || |||||||||||||||||||| ||||    
T  19979789 aataataataaatatatgttataaatggtatatagtcataaatgacttagtt 19979738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 29270303 - 29270235
Alignment:
Q  153 atgttatatattgtatatagtcataaatgactcagt-taaagttcacaaaatacttatacataaatgact 221  Q
    ||||| || |||| |||||||||||||| |||||   |||||| ||||||||||||||||||||||||||    
T  29270303 atgttttaaattgcatatagtcataaattactcaaagtaaagt-cacaaaatacttatacataaatgact 29270235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 20321157 - 20321081
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| | | |||| ||||  |||| |||||||||| ||  ||||| ||||||||||||| ||||    
T  20321157 aatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatggtcataaatgacttagtt 20321081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 23172343 - 23172418
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||| |||||||| ||| |||| ||||  |||| |||||||| | || |||||||||||||||||||| ||||    
T  23172343 aatcgatgaattttacccaaa-aaaattaatattaaatatatgttacaaatggtatatagtcataaatgacttagtt 23172418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 117 - 290
Target Start/End: Original strand, 26565467 - 26565638
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataa 215  Q
    |||||||||||||||||||||||||||| |||  |||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26565467 gatggattttaccaaaacaaaaataatgttaat-atatgttataaactgtatatagtcataaatgactcagtttaaagtccacaaaatacttatacataa 26565565  T
Q  216 atgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg 290  Q
    |||||||| ||  |  |||||||| |||| ||||||||||||||| |  |||||||||||||||||| |||||||    
T  26565566 atgactaaaaagta--gacaaaatacttccaaaccctttaaaatcctaggattttgtatgaatttcatgattttg 26565638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 291
Target Start/End: Original strand, 21157598 - 21157775
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaatacttataca 212  Q
    |||| ||||||| ||||||||||||| ||||| |||| |||||||||| || ||||||| || ||||||||||  |||||||  ||||||||||||||||    
T  21157598 aatcaatggattctaccaaaacaaaagtaatgctaaatatatgttataaatggtatataatcgtaaatgactcgtttaaagtctacaaaatacttataca 21157697  T
Q  213 taaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgt 291  Q
    ||||||||| | || | ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||    
T  21157698 taaatgactca-aaaactggacaaaattcttcaaaatcctttaaaattctgcgattttgtatgaatttcacggttttgt 21157775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 290
Target Start/End: Complemental strand, 30294458 - 30294291
Alignment:
Q  115 tcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagt-taaagttcacaaaatacttatacat 213  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||        |||||| |||| |||||| ||||||||| ||||||||    
T  30294458 tcgatggattttaccaaaacaaagataatgttaaatatatgttataaattgtata--------aatgacccagtataaagtccacaaaatagttatacat 30294367  T
Q  214 aaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg 290  Q
    |||||||||| || ||||||||||||  ||||||||||||||||||  |  ||||||||||||||||||||||||||    
T  30294366 aaatgactaaaaa-aatggacaaaatctttcaaaaccctttaaaattctatgattttgtatgaatttcacgattttg 30294291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 1981257 - 1981360
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| || |||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||  |||| ||||| |||||||||| |||||||||||    
T  1981257 ggattctatcaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagtccacaaaatacatatacataaat 1981356  T
Q  218 gact 221  Q
    ||||    
T  1981357 gact 1981360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 296
Target Start/End: Original strand, 24915794 - 24915901
Alignment:
Q  188 ttaaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgatt 287  Q
    ||||||| |||||||||||||||| ||||||| ||| || ||||||||||||||||| |||| ||||||||   |||| |||||| || |||| ||||||    
T  24915794 ttaaagtccacaaaatacttatacgtaaatgattaaaaa-aatggacaaaattcttcgaaactctttaaaactctgcgtttttgtttggattttacgatt 24915892  T
Q  288 ttgtacgat 296  Q
    |||||||||    
T  24915893 ttgtacgat 24915901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 25842665 - 25842765
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||  |||| ||||| |||||||||| || ||||||||    
T  25842665 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgactaaagttcaaagtccacaaaatacatacacataaat 25842764  T
Q  218 g 218  Q
    |    
T  25842765 g 25842765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 17809050 - 17809151
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag--ttaaagttcacaaaatacttatacataaatg 218  Q
    |||| ||||||||||||||||||| |||| |||||||||| |||| ||||| |||||||||||||||  |||||  | | ||||||||||||||||||||    
T  17809050 gattctaccaaaacaaaaataatgctaaatatatgttataaattgcatataatcataaatgactcagttttaaatctga-aaaatacttatacataaatg 17809148  T
Q  219 act 221  Q
    |||    
T  17809149 act 17809151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 23618363 - 23618463
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| ||||||||||||||||||| |||| |||| ||||| |||| ||||||||||||||||||  |||| |||||  ||||||||| |||||||||||    
T  23618363 ggattctaccaaaacaaaaataatgttaaatatatattataaattgcatatagtcataaatgactaaagttcaaagtctacaaaatacatatacataaat 23618462  T
Q  218 g 218  Q
    |    
T  23618463 g 23618463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 25842879 - 25842975
Alignment:
Q  228 aatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattttactagtattctgcct-tttttggga 323  Q
    |||| ||||||| |||||||| || | ||||||||||||||||| ||||||||||||||||||| | |||||  ||| ||| ||||| |||||||||    
T  25842879 aatgaacaaaatccttcaaaatccatcaaaatcttgcgattttgaatgaatttcacgattttgtgcaatttttgtaggattttgcctgtttttggga 25842975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 5058743 - 5058668
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||||| |||||||||| || ||||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  5058743 aatcgatggactttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 5058668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 8254040 - 8254096
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcat 176  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||    
T  8254040 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcat 8254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 20570800 - 20570870
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    |||||||||| |||||||||| || ||||||  |||| |||||||||| || ||||||||||||||||||||    
T  20570800 aatcgatggactttaccaaaa-aagaataatactaaatatatgttataaatggtatatagtcataaatgact 20570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 7307204 - 7307140
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    |||| ||||||||||||||||||| |||| ||||| |||| |||| |||||||| |||||||||||    
T  7307204 gattctaccaaaacaaaaataatgttaaatatatg-tataaattgcatatagtcgtaaatgactca 7307140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 4247570 - 4247495
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| |||||||||  |||| |||||||| | ||  ||||||||||||||||||| ||||    
T  4247570 aatcgatggattttacctaaa-aaaaataatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 4247495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 44944760 - 44944835
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||| || |||||||||| || ||||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  44944760 aatcgatagactttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 44944835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 8629662 - 8629761
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagttaaagttcacaaaatacttatacataaat 217  Q
    ||||| ||||||||||||||||||| |||| |||||||||| ||||   ||||||||||||  ||   | | ||||| |||||||||| |||||||||||    
T  8629662 ggattctaccaaaacaaaaataatgctaaatatatgttataaattg--catagtcataaatatcttaaattcaaagtccacaaaatacatatacataaat 8629759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 24725387 - 24725467
Alignment:
Q  113 aatcgatggattttaccaaaacaaaa----ataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| ||||    |||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  24725387 aatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 24725467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 4574931 - 4574879
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattg 165  Q
    ||||||| ||||||||||||| |||||||||| | || |||||||||| ||||    
T  4574931 aatcgatagattttaccaaaataaaaataatgcttaatatatgttataaattg 4574879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 8304281 - 8304218
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatat--gttatatattgtatatagtcataaatg 181  Q
    ||||| ||||||||||||||||||  |||| ||||  |||||| |||| |||||||||||||||    
T  8304281 ggattctaccaaaacaaaaataattttaaaaatatatgttataaattgcatatagtcataaatg 8304218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 113 - 324
Target Start/End: Original strand, 15761273 - 15761484
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatag--tcataaatgactcagtt-aaagttcacaaaatacttat 209  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||  |||||||||| | |||| ||| ||||||||||| ||||    
T  15761273 aatcgatggattttaccaaaacaaaaataatgctaaatatatgttataaattgtatatagagtcataaatgagtaagtttaaaattcacaaaatagttat 15761372  T
Q  210 acataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattttactagtattc 309  Q
    ||| | |  |||||  | |||||||||||| |||||||||||||||||||||| ||| |||||||| |||||| ||||||| | | ||||||||| |||     
T  15761373 acacata--actaaataaaatggacaaaatccttcaaaaccctttaaaatctttcgactttgtatggatttcatgattttg-atgcttttactagaattt 15761469  T
Q  310 tgccttttttgggat 324  Q
    ||||| |||||||||    
T  15761470 tgcctattttgggat 15761484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 249
Target Start/End: Complemental strand, 8582257 - 8582121
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaatacttataca 212  Q
    |||||||| |||||||||||||| |||||||| |||| |||||||||| ||||||  |||| |||||| ||  | ||||||| ||||||||| |||||||    
T  8582257 aatcgatgaattttaccaaaacataaataatgttaaatatatgttatacattgtaattagttataaattaccgatttaaagtccacaaaatatttataca 8582158  T
Q  213 taaatgactaacaacaatggacaaaattcttcaaaac 249  Q
    ||||| | ||| || |||| ||||||| |||||||||    
T  8582157 taaattattaaaaaaaatgaacaaaatccttcaaaac 8582121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 26575038 - 26575147
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatacttat 209  Q
    |||||||||||| ||||||||||||| | ||| |||| ||||||| || |||| ||||| ||||||||||||||    ||||||| ||||||||||||||    
T  26575038 aatcgatggattctaccaaaacaaaattgatgctaaaaatatgttttaaattgaatataatcataaatgactcaaagtttaaagtccacaaaatacttat 26575137  T
Q  210 acataaatga 219  Q
    ||||||||||    
T  26575138 acataaatga 26575147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 1018096 - 1018199
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca-gttaaagttcacaaaatacttatac 211  Q
    ||||||| |||| |||||||| |||||||||| ||||  ||||||||| ||| |||||||||||||||||| ||  |||||||  |||||||||||||||    
T  1018096 aatcgatagattctaccaaaataaaaataatgttaaatgtatgttataaattatatatagtcataaatgacccactttaaagtcaacaaaatacttatac 1018195  T
Q  212 ataa 215  Q
    ||||    
T  1018196 ataa 1018199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 16752208 - 16752119
Alignment:
Q  130 aaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||||||||||||| |||| |||||||||| |||| |||||||||||||||| |  |||| |||||||| ||||||| |||||||||||    
T  16752208 aaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgagtaaagttcaaagttcataaaatacatatacataaat 16752119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 40541761 - 40541858
Alignment:
Q  127 accaaaacaaaaa-taatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaatgact 221  Q
    ||||||||||||| ||||| |||| |||||||||| |||| ||||||||||||||||||  |||| || || |||||||||| |||||||||||||||    
T  40541761 accaaaacaaaaaataatgttaaatatatgttataaattgcatatagtcataaatgactaaagttcaaggtacacaaaatacgtatacataaatgact 40541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 11879814 - 11879739
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| || ||||||  |||| |||||||||| || |||||||||||||||| ||| ||||    
T  11879814 aatcgatggattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaattacttagtt 11879739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 11897230 - 11897155
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| || ||||||  |||| |||||||||| || |||||||||||||||| ||| ||||    
T  11897230 aatcgatggattttaccaaaa-aataataatactaaatatatgttataaatggtatatagtcataaattacttagtt 11897155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 17566280 - 17566213
Alignment:
Q  157 tatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaa 223  Q
    |||| ||||||||||||||| |||| || |||| ||||||||||||||||| ||| ||||||||||||    
T  17566280 tataaattgtatatagtcattaatggcttagtttaaagttcacaaaatactcatagataaatgactaa 17566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 6811034 - 6810960
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||  |||||||||  |||| |||||||||| ||  |||||||| |||||||||| ||||    
T  6811034 aatcgatggattttaccaaa--aaaaataatactaaatatatgttataaatgatatatagttataaatgacttagtt 6810960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 3094165 - 3094233
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||| |||| ||||| |||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  3094165 gattttacaaaaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtt 3094233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 23142388 - 23142319
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    |||||||||| ||||||||||  | ||||||  |||| |||||||||| || ||||||||||||||||||||    
T  23142388 aatcgatggactttaccaaaa--ataataatactaaatatatgttataaatggtatatagtcataaatgact 23142319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 29384227 - 29384300
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaa----taatgataaacatatgttatatattgtatatagtcataaatga 182  Q
    ||||||||||||||||||||| |||||    ||||  |||| |||||||||| || ||||||||||||||||||    
T  29384227 aatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggtatatagtcataaatga 29384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 24056523 - 24056578
Alignment:
Q  235 aaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg 290  Q
    ||||| |||| ||||| | ||||||| ||| |||||||||||||||||||||||||    
T  24056523 aaaatccttcgaaaccttataaaatcctgcaattttgtatgaatttcacgattttg 24056578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 45403244 - 45403173
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||||| ||||||||||||| || ||||||  |||| |||||||||| || ||||||  ||||||||||||    
T  45403244 aatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcataaatgact 45403173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 2040314 - 2040274
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttata 160  Q
    ||||| ||||||||||||||||||| |||| ||||||||||    
T  2040314 ggattctaccaaaacaaaaataatgttaaatatatgttata 2040274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 5922265 - 5922194
Alignment:
Q  111 ctaatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgac 183  Q
    ||||||||||||||||||| ||| |||  ||||  |||| |||||||||  || |||||||||||||||||||    
T  5922265 ctaatcgatggattttacccaaa-aaatttaatactaaatatatgttatgaatggtatatagtcataaatgac 5922194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 27836379 - 27836454
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||  | ||||| |||  |||| | |||||||| || |||||||||||||||||||| ||||    
T  27836379 aatcgatggattttaccagcaaaaaaa-aatactaaatacatgttataaatggtatatagtcataaatgacttagtt 27836454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 320
Target Start/End: Original strand, 10872817 - 10872987
Alignment:
Q  151 atatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaac 249  Q
    |||||||||| ||||||| | ||||||||||||  |||| ||||| ||||||||||||| |||||||||||||| || |||||||||||| |||||||||    
T  10872817 atatgttataaattgtattttgtcataaatgacatagtttaaagtccacaaaatacttaaacataaatgactaaaaaaaatggacaaaatccttcaaaac 10872916  T
Q  250 cctttaaaatcttgcgattttgtatgaatttcacgattttgtacgattttactagtattctgccttttttg 320  Q
    | |||||||||||| ||||||||||| |||| | |||||||| |||||||||||| ||| ||||| |||||    
T  10872917 cttttaaaatcttgtgattttgtatggattttaagattttgtgcgattttactaggattttgcctattttg 10872987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 324
Target Start/End: Complemental strand, 27676650 - 27676440
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaatacttataca 212  Q
    |||| |||||||||||||||||||||| |||| |||| |||||||||| ||| |||||||||||||||||||| ||| || | |||||||||||||||||    
T  27676650 aatcaatggattttaccaaaacaaaaacaatgttaaatatatgttataaattatatatagtcataaatgactcggtttaaatccacaaaatacttataca 27676551  T
Q  213 taaatgactaacaacaatggacaaaattcttcaaaaccc-tttaaaatcttgcgattttgtatgaatttcacgattttgtacgattttactagtattctg 311  Q
    ||||||||||  || |||||||||||| ||| ||| ||| ||| || || ||   ||||||||| ||||||||||| ||| | |||||||||| ||| |     
T  27676550 taaatgacta--aaaaatggacaaaatccttaaaaccccttttcaattcctgaatttttgtatggatttcacgattctgtgctattttactaggatttta 27676453  T
Q  312 ccttttttgggat 324  Q
    ||| |||||||||    
T  27676452 cctattttgggat 27676440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 17796742 - 17796593
Alignment:
Q  154 tgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccct 252  Q
    ||||||| |||||||||| | ||||||||||  ||| ||||||||||||| ||||||| |||||||||||| || ||| ||||||||  || ||||||||    
T  17796742 tgttataaattgtatatattaataaatgacttggtttaaagttcacaaaacacttataaataaatgactaaaaaaaatagacaaaatcattaaaaaccct 17796643  T
Q  253 ttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttac 301  Q
    |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  17796642 ttaaaatcctgcaattttgtatggatttcacgattttgatacgattttac 17796593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 19105182 - 19105033
Alignment:
Q  154 tgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccct 252  Q
    ||||||| |||||||||| | ||||||||||  ||| ||||||||||||| ||||||| |||||||||||| || ||| ||||||||  || ||||||||    
T  19105182 tgttataaattgtatatattaataaatgacttggtttaaagttcacaaaacacttataaataaatgactaaaaaaaatagacaaaatcattaaaaaccct 19105083  T
Q  253 ttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttac 301  Q
    |||||||| ||| |||||||||| |||||||||||||| |||||||||||    
T  19105082 ttaaaatcctgcaattttgtatggatttcacgattttgatacgattttac 19105033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 24649598 - 24649686
Alignment:
Q  188 ttaaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaa 277  Q
    |||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  24649598 ttaaagttcacaaaatacttatacataaatgactaaaaa-aatggataaaattcttcaaaaccctttaaaatcctgcgatattgtatgaa 24649686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 26129187 - 26129080
Alignment:
Q  3 ggtgagtttatagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttccatgcgattgaattggattcctaagaatcaa 102  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||| |||||| |||||     ||||||||||||||||||||    
T  26129187 ggtgagtttatcgtatgtaaccaacttttcaaacaagtagtgttttcatgtgttttattcactattttcaatgcg-----attggattcctaagaatcaa 26129093  T
Q  103 attttaaactaat 115  Q
     ||||||||||||    
T  26129092 gttttaaactaat 26129080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 26179243 - 26179136
Alignment:
Q  3 ggtgagtttatagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttccatgcgattgaattggattcctaagaatcaa 102  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |  |||||||||||||| |||||| |||||     ||||||||||||||||||||    
T  26179243 ggtgagtttatcgtatctaaccaacttttcaaacaagtagtgttttcatgtgttttattcactattttcaatgcg-----attggattcctaagaatcaa 26179149  T
Q  103 attttaaactaat 115  Q
     ||||||||||||    
T  26179148 gttttaaactaat 26179136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26205174 - 26205094
Alignment:
Q  1 caggtgagtttatagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttccatgcgattg 81  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||||    
T  26205174 caggtgagtttatcttatgtaaccaacttttcaaacaagtagtgttgtcatgttttttattcattattttccatgcgattg 26205094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 171 - 324
Target Start/End: Original strand, 15806407 - 15806551
Alignment:
Q  171 agtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattt 269  Q
    ||||||||||||||| ||| ||||| ||| |||||||||||||||||||| |   || ||||||||||||| ||||||| |||          |||||||    
T  15806407 agtcataaatgactcggtttaaagtccacgaaatacttatacataaatgattggaaaaaatggacaaaattgttcaaaatcct----------gcgattt 15806496  T
Q  270 tgtatgaatttcacgattttgtacgattttactagtattctgccttttttgggat 324  Q
    |||||| ||||||||||||||| |||||||||||| ||| ||||| |||||||||    
T  15806497 tgtatggatttcacgattttgtgcgattttactaggattttgcctgttttgggat 15806551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 8592333 - 8592397
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  8592333 ggattctaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataaatgact 8592397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 9169868 - 9169782
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatac 205  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||   |||| ||||||||||||||||    
T  9169868 ggattctaccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgataaagttcaaagttcacaaaatac 9169782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 19348748 - 19348648
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactc--agttaaagttcacaaaatacttatacataaat 217  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||   | | ||||| |||| ||||| |||||||||||    
T  19348748 ggattataccaaaacaaaaataatgttaaatatatgttataaattgcatatagtcataaatgactataattcaaagtccacataatacatatacataaat 19348649  T
Q  218 g 218  Q
    |    
T  19348648 g 19348648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 6861054 - 6861165
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactc--ag-ttaaagttcacaaaatacttat 209  Q
    |||||||||||| ||||||||||||||||| | |||  |||||||||| ||||| ||||||||||||||| ||  || ||||||| ||||||| | ||||    
T  6861054 aatcgatggattctaccaaaacaaaaataaagctaactatatgttataaattgtctatagtcataaatgattcgaagtttaaagtgcacaaaacatttat 6861153  T
Q  210 acataaatgact 221  Q
    ||||| ||||||    
T  6861154 acatatatgact 6861165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26110891 - 26110811
Alignment:
Q  1 caggtgagtttatagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttccatgcgattg 81  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||  ||| |||||||||  ||||||||||| ||||    
T  26110891 caggtgagtttatcttatgtaacaaacttttcaaacaagtagtgttgtcatgttttttattcattattttccatgcaattg 26110811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 26127879 - 26127784
Alignment:
Q  13 tagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttccatgcgattgaattggattcctaagaatcaaattttaaact 112  Q
    ||||||||| ||||||||||||||||||||||||||  |||  ||||||||  ||||||||||||     |||||||||||| ||||||| |||||||||    
T  26127879 tagtatgtagccaacttttcaaacaagtagtgttgtcatgttatttattcattattttccatgcg-----attggattcctacgaatcaagttttaaact 26127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 26177929 - 26177834
Alignment:
Q  13 tagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttccatgcgattgaattggattcctaagaatcaaattttaaact 112  Q
    ||||||||| ||||||||||||||||||||||||||  |||  ||||||||  ||||||||||||     |||||||||||| ||||||| |||||||||    
T  26177929 tagtatgtagccaacttttcaaacaagtagtgttgtcatgttatttattcattattttccatgcg-----attggattcctacgaatcaagttttaaact 26177835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 22971004 - 22970903
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcat-aaatgact-cagtt-aaagttcacaaaatacttatacataaa 216  Q
    ||||| ||||||||||||||||||| || | |||||||||| |||| |||||||||| ||||||||  |||| ||||| |||||||||| ||||||||||    
T  22971004 ggattctaccaaaacaaaaataatgttatatatatgttataaattgcatatagtcataaaatgactaaagttcaaagtccacaaaatacatatacataaa 22970905  T
Q  217 tg 218  Q
    ||    
T  22970904 tg 22970903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 26139829 - 26139784
Alignment:
Q  3 ggtgagtttatagtatgtaaccaacttttcaaacaagtagtgttgt 48  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  26139829 ggtgagtttatcgtatgtaaccaacttttcaaacaagtagtgttgt 26139784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 42697062 - 42696986
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| ||||| |||   ||| |||||||||| || |||||||||||||||||||| ||||    
T  42697062 aatcgatggattttaccaaaaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtt 42696986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 18014186 - 18014089
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact-cagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| || |||||||||||||||| |||| |||||||||| ||||   ||||||||||||||||  |||| ||||| |||||||||| |||||||||||    
T  18014186 ggattctatcaaaacaaaaataatgctaaatatatgttataaattg--catagtcataaatgactaaagttcaaagtccacaaaatacatatacataaat 18014089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26233237 - 26233165
Alignment:
Q  1 caggtgagtttatagtatgtaaccaacttttcaaacaagtagtgttgtattgtgttttattcaccattttcca 73  Q
    |||||||||||||  |||||||| |||||||||||||||||||||| |  ||| |||||||||  ||||||||    
T  26233237 caggtgagtttatcttatgtaacaaacttttcaaacaagtagtgttatcatgttttttattcattattttcca 26233165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 28135967 - 28135923
Alignment:
Q  122 attttaccaaaacaaaaataatgataaacatatgttatatattgt 166  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  28135967 attttaccaaaacaaaaataatgttaaacatatgttataaattgt 28135923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 28745990 - 28745915
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| |||| ||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  28745990 aatcgatggattttacccaaa-aaaattaatagtaaatatatgttataaatagtatatagtcataaatgacttagtt 28745915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 39428117 - 39428041
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||| ||| |||| ||||  |||| ||||||||||  | |||||||||||||||||||| ||||    
T  39428117 aatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatatagtcataaatgacttagtt 39428041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 15515173 - 15515246
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||| ||||||||||||||||   |||||||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  15515173 aatccatggattttaccaaaa---aaataatactaaatatatgttataaatggtatatagtcataaatgacttagtt 15515246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 15806302 - 15806352
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgta 167  Q
    |||||||| ||||||||||||||||||| |||| |||||||||| ||||||    
T  15806302 gatggattctaccaaaacaaaaataatgctaaatatatgttataaattgta 15806352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 28135907 - 28135816
Alignment:
Q  223 acaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttg-tacgattttactagtattctgcct 314  Q
    |||| |||||| ||||| ||||||| |||||||||||| | |||||||||||| |||| ||||||||| |  ||||||||||| ||| |||||    
T  28135907 acaaaaatggataaaatccttcaaa-ccctttaaaatccttcgattttgtatggattttacgattttgatgtgattttactagaattttgcct 28135816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 10591840 - 10591789
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatata 171  Q
    ||||| ||||||||||||||||||| |||| |||||||||| |||| |||||    
T  10591840 ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatata 10591789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 6136484 - 6136514
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataat 143  Q
    |||||||||||||||||||||||||||||||    
T  6136484 aatcgatggattttaccaaaacaaaaataat 6136514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 13286158 - 13286128
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataat 143  Q
    |||||||||||||||||||||||||||||||    
T  13286158 aatcgatggattttaccaaaacaaaaataat 13286128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 23649441 - 23649368
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    ||||||||  ||| |||||| ||||||||||| |||| |||||||||| |||| ||| |  |||||||||||||    
T  23649441 aatcgatgagtttcaccaaagcaaaaataatgttaaatatatgttataaattgcataaaaacataaatgactca 23649368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 26201984 - 26201939
Alignment:
Q  68 tttccatgcgattgaattggattcctaagaatcaaattttaaacta 113  Q
    ||||||||| |||  |||||||||||||||||||| ||||||||||    
T  26201984 tttccatgctattcgattggattcctaagaatcaagttttaaacta 26201939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 3041244 - 3041200
Alignment:
Q  255 aaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    |||||| |||||||||| ||| ||||||||||||||| |||||||    
T  3041244 aaaatcctgcgattttgaatggatttcacgattttgtgcgatttt 3041200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 10872634 - 10872666
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaa 149  Q
    |||||||||||||||||||||||||||| ||||    
T  10872634 gatggattttaccaaaacaaaaataatgttaaa 10872666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 304
Target Start/End: Original strand, 24263358 - 24263426
Alignment:
Q  238 attcttcaaaa-ccctttaaaatcttgcgattttgtatgaatttcacga-ttttgtacgattttactag 304  Q
    ||||||||||| ||||| |||||| | | |||||||||| ||||||||| |||||| ||||||||||||    
T  24263358 attcttcaaaatcccttaaaaatcctacaattttgtatggatttcacgatttttgtgcgattttactag 24263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 4841744 - 4841928
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatac 211  Q
    |||||||| ||||||||||||||||||  |||  ||| |||||||||| ||||||||  ||||||||| |||| ||| ||||| || |||||  ||||||    
T  4841744 aatcgatgtattttaccaaaacaaaaaatatgcaaaatatatgttataaattgtata--gtcataaattactcggtttaaagtccataaaatgtttatac 4841841  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    |||||||||||| || |||| ||||||| || ||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||    
T  4841842 ataaatgactaaaaa-aatgcacaaaatcctccaaaaccctttaaaatcatgcgatcttgtatgaatctcacgattttgtgcgatttt 4841928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 18490558 - 18490664
Alignment:
Q  117 gatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagt-taaagttcacaaaatacttatacataa 215  Q
    |||||||| ||||||| |||||||||||||||| |||||||||| || |||||||||  ||||| ||||||| |||||| |||||||||| |||||||||    
T  18490558 gatggattctaccaaatcaaaaataatgataaatatatgttataaatcgtatatagtgctaaataactcagtataaagtccacaaaatacatatacataa 18490657  T
Q  216 atgacta 222  Q
    |||||||    
T  18490658 atgacta 18490664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 3573866 - 3573969
Alignment:
Q  174 cataaatgactcag-ttaaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgt 272  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||| || |||||| |||||||||||||||||||||| ||| ||| |||||||    
T  3573866 cataaatgactcagattaaagtccacaaaatacttaaacataaatgactaaaaa-aatggaaaaaattcttcaaaaccctttaacatcatgcaattttgt 3573964  T
Q  273 atgaa 277  Q
     ||||    
T  3573965 ttgaa 3573969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 31407497 - 31407397
Alignment:
Q  126 taccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatacttatacataaatgacta 222  Q
    ||||||||||||||||||| |||| |||||||||| |||| |||| |||||||||||||||    ||||| | |||||||||||||||||||||||||||    
T  31407497 taccaaaacaaaaataatgttaaatatatgttataaattgcatattgtcataaatgactcaaagtttaaattccacaaaatacttatacataaatgacta 31407398  T
Q  223 a 223  Q
    |    
T  31407397 a 31407397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 33593078 - 33593189
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatacttat 209  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| |||| |||||||||| | |||||||    || ||||  |||||||||||||    
T  33593078 aatcgatggattctaccaaaagaaaaataatgttaaacatatgttataaattgcatatagtcattattgactcaaagtttcaagtctacaaaatacttat 33593177  T
Q  210 acataaatgact 221  Q
    ||||||||||||    
T  33593178 acataaatgact 33593189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 20400001 - 20400099
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca---gttaaagttcacaaaatactta 208  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||    ||||||| |||||||||||||    
T  20400001 aatcgatggattccaccaaaacaaaaataatgataaatatatgttataaattgcatatagtcataaataactcaatgtttaaagtccacaaaatactta 20400099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 5422582 - 5422665
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagttcacaaaata 204  Q
    |||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||||||||  | ||||||| |||||||||    
T  5422582 gattttaccaaaacaaaaataatgctaaatatatgttataaattatatatagtcataaatgaccaatttaaagtccacaaaata 5422665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 7621902 - 7622006
Alignment:
Q  121 gattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca----gttaaagttcacaaaatacttatacataaa 216  Q
    |||| |||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||| |||     || ||||||| ||||||||||||||||||    
T  7621902 gattctaccaaaacaaaaataatgataaatatatattataaattgcctatagtcataaatgattcaaaagtttcaagttcataaaatacttatacataaa 7622001  T
Q  217 tgact 221  Q
    |||||    
T  7622002 tgact 7622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 291
Target Start/End: Original strand, 18490784 - 18490886
Alignment:
Q  188 ttaaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgatt 287  Q
    |||||||||||||||||||| ||||||||||||||| || |||||| ||||| ||||||||  |||||||||  |   |||||||||| |||||||||||    
T  18490784 ttaaagttcacaaaatacttgtacataaatgactaa-aaaaatggataaaatccttcaaaattctttaaaattataaaattttgtatggatttcacgatt 18490882  T
Q  288 ttgt 291  Q
    ||||    
T  18490883 ttgt 18490886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 20432521 - 20432633
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag---ttaaagttcacaaaatacttat 209  Q
    ||||||||||||  |||||||||||||||||  |||  |||||||||| |||| |||||||||||||| |||||    || |||| |||||||||||| |    
T  20432521 aatcgatggattccaccaaaacaaaaataatactaat-atatgttataaattgcatatagtcataaataactcaaaattttaagtccacaaaatactttt 20432619  T
Q  210 acataaatgactaa 223  Q
    ||||||||||||||    
T  20432620 acataaatgactaa 20432633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 23898025 - 23897950
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| ||||| |||  |||| |||||||||| || |||||||||||||||||||| ||||    
T  23898025 aatcgatggattttaccaaaaaaaaaa-aatactaaatatatgttataaatggtatatagtcataaatgacttagtt 23897950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 27890575 - 27890519
Alignment:
Q  126 taccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatga 182  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||    
T  27890575 taccaaaacaaaaataatgctaaatatatgttataaattgcatatagtcataaatga 27890519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 645470 - 645415
Alignment:
Q  131 aaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca 186  Q
    |||||| ||||||| |||| |||||||||| |||| ||||||||||||||||||||    
T  645470 aaacaataataatgctaaatatatgttataaattgcatatagtcataaatgactca 645415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 24209648 - 24209745
Alignment:
Q  126 taccaaaacaaaaataatgataaacatatgttata--tattgtatatagtcataaatgactcag---ttaaagttcacaaaatacttatacataaatg 218  Q
    ||||||||||||| ||||  |||| || |||||||  ||||| |||||||||||||| |||||    || |||||||||||||||||||||| |||||    
T  24209648 taccaaaacaaaattaatattaaatatgtgttatacatattgcatatagtcataaataactcaaaatttcaagttcacaaaatacttatacaaaaatg 24209745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 26053211 - 26053286
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| || ||||||  |||  |||||||||| || |||||||||||||||| ||| ||||    
T  26053211 aatcgatggattttaccaaaa-aataataatactaactatatgttataaatggtatatagtcataaataacttagtt 26053286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 26073264 - 26073339
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    ||||||||||||||||||||| || ||||||  |||  |||||||||| || |||||||||||||||| ||| ||||    
T  26073264 aatcgatggattttaccaaaa-aataataatactaactatatgttataaatggtatatagtcataaataacttagtt 26073339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 7918265 - 7918333
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    |||||||||||||||||||||   |||||||  ||||  ||||||||| ||  |||||||||||||||||||    
T  7918265 aatcgatggattttaccaaaa---aaataatactaaatttatgttataaatgatatatagtcataaatgact 7918333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 17250270 - 17250196
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||| |||||||||||||||| || |||| | ||||| |||| ||||| ||| ||||||||||||||||||| ||||    
T  17250270 aatcaatggattttaccaaaa-aacaatagtaataaatatatattataaatt-tatatagtcataaatgacttagtt 17250196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 8874 - 9015
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagttaaagtt-cacaaaatacttatac 211  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||  ||||||||||||||||||||||||||| || || |||| ||||||||||     
T  8874 aatcgatggattttaccaaaacaaagataatgctaaatatatgttataagttgtatatagtcataaatgactcagtttaatttccacacaatacttatat 8973  T
Q  212 ataaatgactaacaacaatggacaaaattcttcaaaacccttt 254  Q
     ||||||||||| || |||||||||  | ||||||||||||||    
T  8974 gtaaatgactaa-aaaaatggacaacctccttcaaaacccttt 9015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 299
Target Start/End: Original strand, 48688 - 48798
Alignment:
Q  188 ttaaagttcacaaaatacttatacataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgatt 287  Q
    ||||||| ||||||||| |||||||||||||||||  || |||| ||||||| ||||||||||| |||||||| |||| |||||||||||||||||| ||    
T  48688 ttaaagtccacaaaataattatacataaatgactagaaa-aatgaacaaaatccttcaaaacccattaaaatcatgcggttttgtatgaatttcacgttt 48786  T
Q  288 ttgtacgatttt 299  Q
    |||| |||||||    
T  48787 ttgtgcgatttt 48798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 61304 - 61392
Alignment:
Q  210 acataaatgactaacaacaatggacaaaattcttcaaaaccctttaaaatcttgcgattttgtatgaatttcacgattttgtacgatttt 299  Q
    |||||||||||||  || |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||| |||||| |||||||    
T  61304 acataaatgactagaaa-aatggacaaaatccttcaaaacccattaaaatcctgcggttttgtatgaatttcacgtttttgtgcgatttt 61392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 34904 - 35014
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcag-ttaaagttcacaaaatacttatac 211  Q
    |||| ||||||||||| ||||||||||||||| || | |||||||||||||| || ||| ||||||||| ||||| ||||||| ||||||||| ||||||    
T  34904 aatcaatggattttacaaaaacaaaaataatgctacatatatgttatatattatacataatcataaatggctcagtttaaagtccacaaaatatttatac 35003  T
Q  212 ataaatgacta 222  Q
    |||||||||||    
T  35004 ataaatgacta 35014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 530 - 426
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactc--agtt-aaagttcacaaaatacttatacataaa 216  Q
    ||||| ||||||||||||||||||| |||| ||||| |||| |||| |||||||||||||||||||  |||| ||||| |||||||| | ||||||||||    
T  530 ggattctaccaaaacaaaaataatgctaaatatatgatataaattgcatatagtcataaatgactcaaagttcaaagtgcacaaaatgcatatacataaa 431  T
Q  217 tgact 221  Q
    |||||    
T  430 tgact 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 38475 - 38565
Alignment:
Q  130 aaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact--cagtt-aaagttcacaaaatacttatacataaat 217  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| ||||   |||| ||||| |||||||||| |||||||||||    
T  38475 aaaacaaaaataatgataaatatatgttataaattgtatatagtcataaaggacttaaagttcaaagtccacaaaatacatatacataaat 38565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 76257 - 76308
Alignment:
Q  130 aaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatg 181  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  76257 aaaacaaaaataatgataaatatatgttataaattgtatatagtcataaatg 76308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 133049 - 133149
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactca-gtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| ||| ||||||||| ||||| |||| |||||||||| |||| |||||||||||||||||  | ||| ||||| |||||||||| |||||||||||    
T  133049 ggattctactaaaacaaaattaatgttaaatatatgttataaattgcatatagtcataaatgaccaaagttcaaagtccacaaaatacatatacataaat 133148  T
Q  218 g 218  Q
    |    
T  133149 g 133149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 5146 - 5249
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatga-ctcagtt-aaagttcacaaaatacttatacataaat 217  Q
    ||||| |||||||  |||||||||| |||| |||||||||| |||| || ||||||||||||| |  |||| ||||| |||||||||| | |||||||||    
T  5146 ggattctaccaaatgaaaaataatgctaaatatatgttataaattgcatgtagtcataaatgatcaaagttcaaagtccacaaaatacatgtacataaat 5245  T
Q  218 gact 221  Q
    ||||    
T  5246 gact 5249  T

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Target: scaffold0534 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 852 - 785
Alignment:
Q  157 tatatattgtatatagtcataaatgactcagtt-aaagttcacaaaatacttatacataaatgactaa 223  Q
    |||| ||||||||||||||| |||| || |||| ||||||||||||||||| ||| ||||||||||||    
T  852 tataaattgtatatagtcattaatggcttagtttaaagttcacaaaatactcatagataaatgactaa 785  T

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Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 8655 - 8582
Alignment:
Q  113 aatcgatggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgactcagtt 189  Q
    |||||||||||||||||||||   |||||||  |||| ||||| |||| || |||||||||||||||||||| ||||    
T  8655 aatcgatggattttaccaaaa---aaataatactaaatatatggtataaatggtatatagtcataaatgacttagtt 8582  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 142810 - 142722
Alignment:
Q  136 aaaataatgataaacatatgttatatattgtatatagtcataaatgactca--gtt-aaagttcacaaaatacttatacataaatgact 221  Q
    ||||||||| |||| |||||||||| |||| ||||||||| |||||| |||  ||| ||||| || ||||||| |||||||||||||||    
T  142810 aaaataatgctaaatatatgttataaattgcatatagtcaaaaatgattcaaagttcaaagtccaaaaaatacatatacataaatgact 142722  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 37057 - 37103
Alignment:
Q  166 tatatagtcataaatgactcag-ttaaagttcacaaaatacttatac 211  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||    
T  37057 tatatagtcataaatgactccgtttaaagtacacaaaatacttatac 37103  T

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Target: scaffold0526 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 8351 - 8288
Alignment:
Q  120 ggattttaccaaaacaaaaataatgataaacatatgttatatattgtatatagtcataaatgact 184  Q
    ||||| |||||||||||| |||||  |||| |||||| ||| |||| ||||||||||||||||||    
T  8351 ggattctaccaaaacaaatataatactaaatatatgt-ataaattgcatatagtcataaatgact 8288  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 18205 - 18165
Alignment:
Q  250 cctttaaaatcttgcgattttgtatgaatttcacgattttg 290  Q
    |||| ||||||||||||||||| ||| ||||||||||||||    
T  18205 ccttcaaaatcttgcgattttgcatggatttcacgattttg 18165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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